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UBERON:0003464

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Name:hindlimb bone
Namespace:FANTOM
Definition:"A bone that is part of a hindlimb region. Examples: any foot phalanx, femur. Counter-examples: ischium, pubis (they are part of the pelvic girdle)" [UBERON:cjm]
Xrefs:
links:

EFO:0003842
GAID:198
ncithesaurus:Bone_of_the_Lower_Extremity

SCTID:361370006
Synonyms: "bone of hind limb" EXACT [OBOL:automatic]
"bone of hindlimb" EXACT [OBOL:automatic]
"bone of inferior member" EXACT [OBOL:automatic]
"bone of lower extremity" EXACT [OBOL:automatic]
"bone organ of hind limb" EXACT [OBOL:automatic]
"bone organ of hindlimb" EXACT [OBOL:automatic]
"bone organ of inferior member" EXACT [OBOL:automatic]
"bone organ of lower extremity" EXACT [OBOL:automatic]
"hind limb bone" EXACT [OBOL:automatic]
"hind limb bone organ" EXACT [OBOL:automatic]
"hindlimb bone organ" EXACT [OBOL:automatic]
"inferior member bone" EXACT [OBOL:automatic]
"inferior member bone organ" EXACT [OBOL:automatic]
"lower extremity bone" EXACT [OBOL:automatic]
"lower extremity bone organ" EXACT [OBOL:automatic]
Comments:Note that the MA class is actually bone of pelvic complex; in contrast the NCIT class excludes ilium etc

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002428(limb bone),UBERON:0010742(bone of pelvic complex),UBERON:0015022(hindlimb endochondral element)
develops_from:UBERON:0010885(hindlimb cartilage element)
part_of:UBERON:0002103(hindlimb),UBERON:0001441(hindlimb skeleton),UBERON:0002103(hindlimb)



Children

is a:UBERON:0003608 (hindlimb long bone),UBERON:0005893 (leg bone)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003464 (hindlimb bone), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.4e-49FFCP PHASE1:Mm9::chr11:77624716..77624729,+#_1d32d6d484fb9d1195edb887dba3e971p26@Myo18a
3.4e-49FFCP PHASE2:Mm9::chr11:77624716..77624729,+#_1d32d6d484fb9d1195edb887dba3e971p26@Myo18a
4.96e-49FFCP PHASE1:Mm9::chr8:75097542..75097549,+#_61c81adaa8b65390007c8c86323697e7p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr2:32482372..32482381,+#_61c81adaa8b65390007c8c86323697e7p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr2:32482372..32482381,+#_61c81adaa8b65390007c8c86323697e7p@chr2:32482372..32482381, +
4.96e-49FFCP PHASE2:Mm9::chr8:75097542..75097549,+#_61c81adaa8b65390007c8c86323697e7p@chr8:75097542..75097549, +
4.96e-49FFCP PHASE1:Mm9::chr9:21934585..21934591,-#_61c81adaa8b65390007c8c86323697e7p@chr9:21934585..21934591, -
4.96e-49FFCP PHASE2:Mm9::chr9:21934585..21934591,-#_61c81adaa8b65390007c8c86323697e7p@chr9:21934585..21934591, -
3.15e-44FFCP PHASE1:Mm9::chr6:51525810..51525817,+#_bc9311a12c0af0b3c05d513dc9472606p@chr6:51525810..51525817, +
3.15e-44FFCP PHASE2:Mm9::chr6:51525810..51525817,+#_bc9311a12c0af0b3c05d513dc9472606p@chr6:51525810..51525817, +
9.78e-40FFCP PHASE1:Mm9::chr19:4876870..4876880,-#_b83f8a97b05cc9fe9991c4069b8b0d90p@chr19:4876870..4876880, -
9.78e-40FFCP PHASE2:Mm9::chr19:4876870..4876880,-#_b83f8a97b05cc9fe9991c4069b8b0d90p@chr19:4876870..4876880, -
1.15e-39FFCP PHASE1:Mm9::chr11:67063327..67063335,+#_9315c33a8438d1c591713a9970d09150p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE1:Mm9::chr1:174140324..174140335,-#_9315c33a8438d1c591713a9970d09150p@chr1:174140324..174140335, -
1.15e-39FFCP PHASE1:Mm9::chr6:4490674..4490679,+#_9315c33a8438d1c591713a9970d09150p@chr6:4490674..4490679, +
1.15e-39FFCP PHASE2:Mm9::chr11:67063327..67063335,+#_9315c33a8438d1c591713a9970d09150p@chr11:67063327..67063335, +
1.15e-39FFCP PHASE2:Mm9::chr16:24096441..24096449,+#_9315c33a8438d1c591713a9970d09150p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE1:Mm9::chr16:24096441..24096449,+#_9315c33a8438d1c591713a9970d09150p@chr16:24096441..24096449, +
1.15e-39FFCP PHASE2:Mm9::chr6:4490674..4490679,+#_9315c33a8438d1c591713a9970d09150+, p@chr6:4490674..4490679
1.15e-39FFCP PHASE2:Mm9::chr1:174140324..174140335,-#_9315c33a8438d1c591713a9970d09150p@chr1:174140324..174140335, -
1.55e-39FFCP PHASE1:Mm9::chr1:174143249..174143260,-#_80c29dca8ac440edc05a23bf9e0e8b2fp@chr1:174143249..174143260, -
1.55e-39FFCP PHASE2:Mm9::chr1:174143249..174143260,-#_80c29dca8ac440edc05a23bf9e0e8b2fp@chr1:174143249..174143260, -
3.03e-39FFCP PHASE2:Mm9::chr6:51525869..51525891,+#_9ac547b8f1135efe9f1f30af94b86093p@chr6:51525869..51525891, +
3.03e-39FFCP PHASE1:Mm9::chr6:51525869..51525891,+#_9ac547b8f1135efe9f1f30af94b86093p@chr6:51525869..51525891, +
9.31e-39FFCP PHASE2:Mm9::chr11:102130083..102130092,+#_de6114d84538957fac675746bc0849e4p3@Asb16
9.31e-39FFCP PHASE1:Mm9::chr11:102130083..102130092,+#_de6114d84538957fac675746bc0849e4p3@Asb16
2.41e-35FFCP PHASE2:Mm9::chr7:133604286..133604297,-#_fb7987871bdebe6d6a1b95ead35f8dc1p@chr7:133604286..133604297, -
2.41e-35FFCP PHASE1:Mm9::chr7:133604286..133604297,-#_fb7987871bdebe6d6a1b95ead35f8dc1p@chr7:133604286..133604297, -
2.95e-35FFCP PHASE2:Mm9::chr4:138365748..138365759,-#_1925a60e9ac64ceb98389627fee823e4p5@Pla2g5
2.95e-35FFCP PHASE1:Mm9::chr4:138365748..138365759,-#_1925a60e9ac64ceb98389627fee823e4p5@Pla2g5
9.53e-34FFCP PHASE1:Mm9::chr8:74049600..74049612,-#_9097d23b952b559d094fc3e75d12c092p2@uc009mdq.1
9.53e-34FFCP PHASE2:Mm9::chr8:74049600..74049612,-#_9097d23b952b559d094fc3e75d12c092p2@uc009mdq.1
1.23e-33FFCP PHASE2:Mm9::chr2:164773241..164773248,+#_0769c1ac6e47aa7f369e23210e117294p3@Mmp9
1.23e-33FFCP PHASE1:Mm9::chr2:164773241..164773248,+#_0769c1ac6e47aa7f369e23210e117294p3@Mmp9
1.58e-33FFCP PHASE2:Mm9::chr1:166815111..166815121,-#_6d33d3b540b75dd04007270a28600642p@chr1:166815111..166815121, -
1.58e-33FFCP PHASE1:Mm9::chr7:3567707..3567718,-#_6d33d3b540b75dd04007270a28600642p2@Oscar
1.58e-33FFCP PHASE2:Mm9::chr7:3567707..3567718,-#_6d33d3b540b75dd04007270a28600642p2@Oscar
1.58e-33FFCP PHASE1:Mm9::chr1:166815111..166815121,-#_6d33d3b540b75dd04007270a28600642p@chr1:166815111..166815121, -
2.04e-33FFCP PHASE1:Mm9::chr9:70799951..70799962,-#_c9ab3e90febb30fa81d3dd58268cb10bp4@Lipc
2.04e-33FFCP PHASE2:Mm9::chr11:75409652..75409664,+#_c9ab3e90febb30fa81d3dd58268cb10bp@chr11:75409652..75409664, +
2.04e-33FFCP PHASE2:Mm9::chr9:70799951..70799962,-#_c9ab3e90febb30fa81d3dd58268cb10bp4@Lipc
2.04e-33FFCP PHASE1:Mm9::chr11:75409652..75409664,+#_c9ab3e90febb30fa81d3dd58268cb10b+, p@chr11:75409652..75409664
3.38e-33FFCP PHASE1:Mm9::chr15:102196702..102196713,-#_6b15147437e3448dea045b610009606ep6@Sp7
3.38e-33FFCP PHASE2:Mm9::chr15:102196702..102196713,-#_6b15147437e3448dea045b610009606ep6@Sp7
7.17e-33FFCP PHASE1:Mm9::chr18:76271498..76271508,+#_2b6b368f8881c4566922943cd97e753b+, p@chr18:76271498..76271508
7.17e-33FFCP PHASE1:Mm9::chr8:126415826..126415839,+#_2b6b368f8881c4566922943cd97e753bp@chr8:126415826..126415839, +
7.17e-33FFCP PHASE2:Mm9::chr18:76271498..76271508,+#_2b6b368f8881c4566922943cd97e753bp@chr18:76271498..76271508, +
7.17e-33FFCP PHASE2:Mm9::chr8:126415826..126415839,+#_2b6b368f8881c4566922943cd97e753bp@chr8:126415826..126415839, +
2.67e-30FFCP PHASE1:Mm9::chr2:32482387..32482399,+#_f4c89368791382caf554c95d2b444153p@chr2:32482387..32482399, +
2.67e-30FFCP PHASE2:Mm9::chr2:32482387..32482399,+#_f4c89368791382caf554c95d2b444153p@chr2:32482387..32482399, +
1.1e-29FFCP PHASE2:Mm9::chr12:70396969..70396979,+#_5ef1f082869c0fa679a87b2354113453p@chr12:70396969..70396979, +
1.1e-29FFCP PHASE1:Mm9::chr15:58649683..58649688,-#_5ef1f082869c0fa679a87b2354113453p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE2:Mm9::chr15:58649683..58649688,-#_5ef1f082869c0fa679a87b2354113453p@chr15:58649683..58649688, -
1.1e-29FFCP PHASE1:Mm9::chr12:70396969..70396979,+#_5ef1f082869c0fa679a87b2354113453p@chr12:70396969..70396979, +
1.46e-29FFCP PHASE2:Mm9::chr7:133590998..133591009,-#_c5d1e0e089d7d4cbb31296864bc34920p@chr7:133590998..133591009, -
1.46e-29FFCP PHASE1:Mm9::chr7:133590998..133591009,-#_c5d1e0e089d7d4cbb31296864bc34920p@chr7:133590998..133591009, -
1.73e-29FFCP PHASE1:Mm9::chr18:60751417..60751432,-#_7f067442785abf93e40e5d3b04a81e6dp2@Myoz3
1.73e-29FFCP PHASE2:Mm9::chr18:60751417..60751432,-#_7f067442785abf93e40e5d3b04a81e6dp2@Myoz3
2.42e-29FFCP PHASE1:Mm9::chr11:67051354..67051366,+#_5e47136b67bba3e6ba54028b5869a50ap2@Myh4
2.42e-29FFCP PHASE2:Mm9::chr11:67051354..67051366,+#_5e47136b67bba3e6ba54028b5869a50ap2@Myh4
7.46e-29FFCP PHASE2:Mm9::chr1:57155729..57155740,-#_a212dad2bde26e8a3a8126912d64fa7f-, p@chr1:57155729..57155740
7.46e-29FFCP PHASE1:Mm9::chr1:57155729..57155740,-#_a212dad2bde26e8a3a8126912d64fa7fp@chr1:57155729..57155740, -
9.26e-29FFCP PHASE2:Mm9::chr4:43597258..43597265,-#_659d25280593011f794925d7b7e259bdp1@Msmp
9.26e-29FFCP PHASE1:Mm9::chr4:43597258..43597265,-#_659d25280593011f794925d7b7e259bdp1@Msmp
9.26e-29FFCP PHASE2:Mm9::chr11:67056544..67056589,-#_659d25280593011f794925d7b7e259bd-, p@chr11:67056544..67056589
9.26e-29FFCP PHASE1:Mm9::chr11:67056544..67056589,-#_659d25280593011f794925d7b7e259bd-, p@chr11:67056544..67056589
1.15e-28FFCP PHASE1:Mm9::chr6:90552017..90552024,+#_3bda8bde65fe2b0083fcef921ca814b4p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE2:Mm9::chr6:90552017..90552024,+#_3bda8bde65fe2b0083fcef921ca814b4p@chr6:90552017..90552024, +
1.15e-28FFCP PHASE2:Mm9::chrY:2858251..2858257,+#_3bda8bde65fe2b0083fcef921ca814b4p@chrY:2858251..2858257, +
1.15e-28FFCP PHASE1:Mm9::chrY:2858251..2858257,+#_3bda8bde65fe2b0083fcef921ca814b4p@chrY:2858251..2858257, +
1.43e-28FFCP PHASE1:Mm9::chr6:34436258..34436292,+#_bfe6ce6b11499262608f5c2230d05159p@chr6:34436258..34436292, +
1.43e-28FFCP PHASE2:Mm9::chr6:34436258..34436292,+#_bfe6ce6b11499262608f5c2230d05159p@chr6:34436258..34436292, +
2.2e-28FFCP PHASE2:Mm9::chr11:67069796..67069817,-#_500ff9c6c36220d1aa2d4414225fcae4p@chr11:67069796..67069817, -
2.2e-28FFCP PHASE1:Mm9::chr11:67069796..67069817,-#_500ff9c6c36220d1aa2d4414225fcae4p@chr11:67069796..67069817, -
2.72e-28FFCP PHASE2:Mm9::chr8:107702369..107702386,+#_a04ea4d3c7dada9e9ff768cab9ecf65dp@chr8:107702369..107702386, +
2.72e-28FFCP PHASE1:Mm9::chr8:107702369..107702386,+#_a04ea4d3c7dada9e9ff768cab9ecf65dp@chr8:107702369..107702386, +
3.45e-28FFCP PHASE2:Mm9::chr18:78254135..78254146,-#_e1458260b08373d9639d37816deca62dp1@Siglec15
3.45e-28FFCP PHASE1:Mm9::chr18:78254135..78254146,-#_e1458260b08373d9639d37816deca62dp1@Siglec15
6.5e-28FFCP PHASE1:Mm9::chr7:133591490..133591500,-#_0c5b633e2b252cbc7d24e4dfcb1a1737p6@Atp2a1
6.5e-28FFCP PHASE2:Mm9::chr7:133591490..133591500,-#_0c5b633e2b252cbc7d24e4dfcb1a1737p6@Atp2a1
8.9e-28FFCP PHASE1:Mm9::chr7:133591156..133591165,-#_e20ad0d2f5ff59acd149e355032f4718p7@Atp2a1
8.9e-28FFCP PHASE2:Mm9::chr7:133591156..133591165,-#_e20ad0d2f5ff59acd149e355032f4718p7@Atp2a1
1.42e-27FFCP PHASE1:Mm9::chr7:133592162..133592188,-#_548625629c55258fd4bfafd8e62f047fp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE2:Mm9::chr7:133600635..133600663,+#_548625629c55258fd4bfafd8e62f047fp@chr7:133600635..133600663, +
1.42e-27FFCP PHASE2:Mm9::chr7:133592162..133592188,-#_548625629c55258fd4bfafd8e62f047fp@chr7:133592162..133592188, -
1.42e-27FFCP PHASE1:Mm9::chr7:133600635..133600663,+#_548625629c55258fd4bfafd8e62f047fp@chr7:133600635..133600663, +
6.75e-27FFCP PHASE2:Mm9::chr11:94837662..94837673,-#_d1aa5f95e0a571c4b1a2828f342aaafep4@Sgca
6.75e-27FFCP PHASE1:Mm9::chr11:94837662..94837673,-#_d1aa5f95e0a571c4b1a2828f342aaafep4@Sgca
1.66e-26FFCP PHASE1:Mm9::chr5:104754379..104754387,+#_dbc2e5cc325854b724ab0400b3fba00bp1@Mepe
1.66e-26FFCP PHASE2:Mm9::chr5:104754379..104754387,+#_dbc2e5cc325854b724ab0400b3fba00bp1@Mepe
3.47e-26FFCP PHASE2:Mm9::chr12:81581216..81581231,+#_39fbe189171ab46ba0af1669c2f3b2c8p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE1:Mm9::chr16:32400888..32400899,+#_39fbe189171ab46ba0af1669c2f3b2c8p2@Tm4sf19
3.47e-26FFCP PHASE1:Mm9::chr12:81581216..81581231,+#_39fbe189171ab46ba0af1669c2f3b2c8p@chr12:81581216..81581231, +
3.47e-26FFCP PHASE2:Mm9::chr16:32400888..32400899,+#_39fbe189171ab46ba0af1669c2f3b2c8p2@Tm4sf19
1.12e-25FFCP PHASE1:Mm9::chr17:34176173..34176200,+#_0e43d619188a4c3fdcf11e3d84fa85f3p5@Col11a2
1.12e-25FFCP PHASE2:Mm9::chr15:97806574..97806585,-#_0e43d619188a4c3fdcf11e3d84fa85f3p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE1:Mm9::chr15:97806574..97806585,-#_0e43d619188a4c3fdcf11e3d84fa85f3p@chr15:97806574..97806585, -
1.12e-25FFCP PHASE2:Mm9::chr17:34176173..34176200,+#_0e43d619188a4c3fdcf11e3d84fa85f3p5@Col11a2
1.36e-25FFCP PHASE1:Mm9::chr18:78254174..78254185,-#_3afdf57cf2f1f64af65d1925c8ef43c2p2@Siglec15
1.36e-25FFCP PHASE1:Mm9::chr2:180890942..180890956,-#_3afdf57cf2f1f64af65d1925c8ef43c2p@chr2:180890942..180890956, -