Personal tools

UBERON:0004782

From FANTOM5_SSTAR

Jump to: navigation, search

Name:gastrointestinal system serosa
Namespace:FANTOM
Definition:"A serous membrane that is part of a digestive system [Obol]." [OBOL:automatic]
Xrefs:
links:
MA:0001522
Synonyms: "digestive system serosa" EXACT [OBOL:automatic]
"digestive system serous membrane" EXACT [OBOL:automatic]
"gastrointestinal system serous membrane" EXACT [OBOL:automatic]
"serosa of digestive system" EXACT [OBOL:automatic]
"serosa of gastrointestinal system" EXACT [OBOL:automatic]
"serous membrane of digestive system" EXACT [OBOL:automatic]
"serous membrane of gastrointestinal system" EXACT [OBOL:automatic]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000042(serous membrane)
part_of:UBERON:0005409(gastrointestinal system)



Children

is a:UBERON:0004854 (gastrointestinal system mesentery)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004782 (gastrointestinal system serosa), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_aaac781f7b01d6b625e6e0ffcc061e2dp17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_aaac781f7b01d6b625e6e0ffcc061e2dp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc001ftm.1
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_aaac781f7b01d6b625e6e0ffcc061e2dp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_aaac781f7b01d6b625e6e0ffcc061e2dp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_aaac781f7b01d6b625e6e0ffcc061e2dp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_aaac781f7b01d6b625e6e0ffcc061e2dp11@PDLIM2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_aaac781f7b01d6b625e6e0ffcc061e2dp17@AP2A2
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_aaac781f7b01d6b625e6e0ffcc061e2dp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_aaac781f7b01d6b625e6e0ffcc061e2dp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_aaac781f7b01d6b625e6e0ffcc061e2dp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_aaac781f7b01d6b625e6e0ffcc061e2dp12@JDP2
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_aaac781f7b01d6b625e6e0ffcc061e2dp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_aaac781f7b01d6b625e6e0ffcc061e2dp19@RAPGEF5
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_aaac781f7b01d6b625e6e0ffcc061e2dp12@JDP2
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_aaac781f7b01d6b625e6e0ffcc061e2dp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_aaac781f7b01d6b625e6e0ffcc061e2dp19@RAPGEF5
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_aaac781f7b01d6b625e6e0ffcc061e2dp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_aaac781f7b01d6b625e6e0ffcc061e2dp5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_aaac781f7b01d6b625e6e0ffcc061e2dp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_aaac781f7b01d6b625e6e0ffcc061e2dp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_aaac781f7b01d6b625e6e0ffcc061e2dp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_aaac781f7b01d6b625e6e0ffcc061e2d-, p@chr10:98014943..98014960
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_aaac781f7b01d6b625e6e0ffcc061e2dp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_aaac781f7b01d6b625e6e0ffcc061e2dp11@PDLIM2
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_aaac781f7b01d6b625e6e0ffcc061e2dp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_aaac781f7b01d6b625e6e0ffcc061e2dp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_aaac781f7b01d6b625e6e0ffcc061e2dp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_aaac781f7b01d6b625e6e0ffcc061e2dp60@SYNE1
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_aaac781f7b01d6b625e6e0ffcc061e2dp1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_aaac781f7b01d6b625e6e0ffcc061e2dp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_aaac781f7b01d6b625e6e0ffcc061e2dp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_aaac781f7b01d6b625e6e0ffcc061e2dp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_aaac781f7b01d6b625e6e0ffcc061e2dp10@VPS13A
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr22:36718586..36718593, -
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr11:56859722..56859732, -
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_2cf9b620a0e055ba61d1c41a492d0b05p@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_2cf9b620a0e055ba61d1c41a492d0b05p15@KIF17
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_2cf9b620a0e055ba61d1c41a492d0b05p@chr9:127267367..127267383, +
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_2cf9b620a0e055ba61d1c41a492d0b05p15@KIF17
9.74e-88FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_b0ac802ac1cf459edb396b2023932bd9p6@IL34
9.74e-88FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_b0ac802ac1cf459edb396b2023932bd9p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_b0ac802ac1cf459edb396b2023932bd9p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_b0ac802ac1cf459edb396b2023932bd9p19@TRHDE
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr2:1508349..1508357,+#_b0ac802ac1cf459edb396b2023932bd9p@chr2:1508349..1508357, +
9.74e-88FFCP PHASE1:Hg19::chr12:72481040..72481051,+#_b0ac802ac1cf459edb396b2023932bd9p19@TRHDE
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_b0ac802ac1cf459edb396b2023932bd9p@chr14:24168655..24168686, +