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UBERON:0004810

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Name:nephron tubule epithelium
Namespace:FANTOM
Definition:"An epithelium that is part of a nephron tubule [Obol]." [OBOL:automatic]
Xrefs:
links:

MA:0001681

ncithesaurus:Renal_Tubule_Epithelium
Synonyms: "epithelial tissue of nephron tubule" EXACT [OBOL:automatic]
"epithelial tissue of renal tubule" EXACT [OBOL:automatic]
"epithelial tissue of tubulus renalis" EXACT [OBOL:automatic]
"epithelium of nephron tubule" EXACT [OBOL:automatic]
"epithelium of renal tubule" EXACT [OBOL:automatic]
"epithelium of tubulus renalis" EXACT [OBOL:automatic]
"nephron tubule epithelial tissue" EXACT [OBOL:automatic]
"nephron tubule epithelium" EXACT [OBOL:automatic]
"renal tubule epithelial tissue" EXACT [OBOL:automatic]
"tubulus renalis epithelial tissue" EXACT [OBOL:automatic]
"tubulus renalis epithelium" EXACT [OBOL:automatic]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004211(nephron epithelium)
part_of:UBERON:0001231(nephron tubule)



Children

is a:UBERON:0007685 (region of nephron tubule)
part of:CL:1000494 (nephron tubule epithelial cell)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0004810 (nephron tubule epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
3.6e-125FFCP PHASE2:Hg19::chr15:66420804..66420837,-#_661ae4b5e7d9de4463bf261f705e6aa3p4@MEGF11
3.6e-125FFCP PHASE1:Hg19::chr15:66420804..66420837,-#_661ae4b5e7d9de4463bf261f705e6aa3p4@MEGF11
4.27e-99FFCP PHASE2:Hg19::chr1:1100457..1100470,+#_8b266201f1c7ab01fb5dbbcea59ae589p@chr1:1100457..1100470, +
4.27e-99FFCP PHASE1:Hg19::chr1:1100457..1100470,+#_8b266201f1c7ab01fb5dbbcea59ae589p@chr1:1100457..1100470, +
6.34e-89FFCP PHASE1:Hg19::chr2:693380..693398,+#_659b7fab47e5e016c442289e52614903p@chr2:693380..693398, +
6.34e-89FFCP PHASE2:Hg19::chr2:693380..693398,+#_659b7fab47e5e016c442289e52614903p@chr2:693380..693398, +
6.95e-79FFCP PHASE2:Hg19::chr1:81001398..81001426,+#_543c49f75d8e8bced080f411968077a2p1@ENST00000418041, p1@ENST00000443104
6.95e-79FFCP PHASE1:Hg19::chr1:81001398..81001426,+#_543c49f75d8e8bced080f411968077a2p1@ENST00000418041, p1@ENST00000443104
1.14e-78FFCP PHASE1:Hg19::chr7:27219833..27219845,-#_dfb13bb7453a5adb0a8f3db77ca8767cp7@HOXA10
1.14e-78FFCP PHASE2:Hg19::chr7:27219833..27219845,-#_dfb13bb7453a5adb0a8f3db77ca8767cp7@HOXA10
2.82e-76FFCP PHASE2:Hg19::chr7:7606139..7606151,-#_c7d0e8490b368c62cd9ca3e89414eedep@chr7:7606139..7606151, -
2.82e-76FFCP PHASE1:Hg19::chr7:7606139..7606151,-#_c7d0e8490b368c62cd9ca3e89414eedep@chr7:7606139..7606151, -
2.46e-75FFCP PHASE2:Hg19::chr10:102505954..102505973,+#_36e516515532089c153aa43902922529p3@PAX2
2.46e-75FFCP PHASE1:Hg19::chr10:102505954..102505973,+#_36e516515532089c153aa43902922529p3@PAX2
2.88e-75FFCP PHASE1:Hg19::chr18:3456189..3456200,+#_31eccac14d9118a30786456380a4c072p@chr18:3456189..3456200, +
2.88e-75FFCP PHASE2:Hg19::chr18:3456189..3456200,+#_31eccac14d9118a30786456380a4c072p@chr18:3456189..3456200, +
1.48e-74FFCP PHASE1:Hg19::chr21:41029235..41029269,+#_c554f9cd77fbc1fea0cd668f3afebdbep2@B3GALT5
1.48e-74FFCP PHASE2:Hg19::chr21:41029235..41029269,+#_c554f9cd77fbc1fea0cd668f3afebdbep2@B3GALT5
2.7e-74FFCP PHASE1:Hg19::chr7:140227349..140227360,-#_004187c9a104d5847876009da1ce3315p@chr7:140227349..140227360, -
2.7e-74FFCP PHASE2:Hg19::chr7:140227349..140227360,-#_004187c9a104d5847876009da1ce3315p@chr7:140227349..140227360, -
5.32e-74FFCP PHASE2:Hg19::chr10:102495147..102495159,+#_427a9525a4cb541932794ce2284dcfebp4@PAX2
5.32e-74FFCP PHASE1:Hg19::chr10:102495147..102495159,+#_427a9525a4cb541932794ce2284dcfebp4@PAX2
5.85e-74FFCP PHASE2:Hg19::chr9:133986782..133986794,+#_8ac0e2dc05e298e7078174d508648b98p4@AIF1L
5.85e-74FFCP PHASE1:Hg19::chr9:133986782..133986794,+#_8ac0e2dc05e298e7078174d508648b98p4@AIF1L
1.31e-72FFCP PHASE2:Hg19::chr20:6034607..6034616,-#_efdd51489e62ec0acca29f37490be6f3p6@LRRN4
1.31e-72FFCP PHASE1:Hg19::chr20:6034607..6034616,-#_efdd51489e62ec0acca29f37490be6f3p6@LRRN4
1.88e-70FFCP PHASE2:Hg19::chr20:6033532..6033548,-#_dde46130c24198bad8c13ba6470c9cebp2@AB527789
1.88e-70FFCP PHASE1:Hg19::chr20:6033532..6033548,-#_dde46130c24198bad8c13ba6470c9cebp2@AB527789
1.06e-64FFCP PHASE1:Hg19::chr16:3068288..3068312,-#_31f190bc7ba1d0062103430f607421e5p2@CLDN6
1.06e-64FFCP PHASE2:Hg19::chr16:3068288..3068312,-#_31f190bc7ba1d0062103430f607421e5p2@CLDN6
2.76e-64FFCP PHASE2:Hg19::chr7:98453821..98453843,-#_cb793c2f88170672e2575e4968587e25-, p@chr7:98453821..98453843
2.76e-64FFCP PHASE1:Hg19::chr7:98453821..98453843,-#_cb793c2f88170672e2575e4968587e25p@chr7:98453821..98453843, -
1.24e-63FFCP PHASE1:Hg19::chr16:86604624..86604648,+#_4bc2dd73f0745d0724a07f1233c0ec94p@chr16:86604624..86604648, +
1.24e-63FFCP PHASE2:Hg19::chr16:86604624..86604648,+#_4bc2dd73f0745d0724a07f1233c0ec94p@chr16:86604624..86604648, +
4.48e-60FFCP PHASE1:Hg19::chr9:133986807..133986821,+#_e775e7e5cc05e80e28aedcc9b3516f6cp3@AIF1L
4.48e-60FFCP PHASE2:Hg19::chr9:133986807..133986821,+#_e775e7e5cc05e80e28aedcc9b3516f6cp3@AIF1L
1.1e-59FFCP PHASE1:Hg19::chr1:20465872..20465881,+#_849c01fc76a6ec663a87349e1f25bd61p2@PLA2G2F
1.1e-59FFCP PHASE2:Hg19::chr1:20465872..20465881,+#_849c01fc76a6ec663a87349e1f25bd61p2@PLA2G2F
2.05e-59FFCP PHASE2:Hg19::chr2:31361432..31361442,-#_73d49992371e85bc1fba41ed6770f4eep6@GALNT14
2.05e-59FFCP PHASE1:Hg19::chr2:31361432..31361442,-#_73d49992371e85bc1fba41ed6770f4eep6@GALNT14
8.36e-59FFCP PHASE2:Hg19::chr20:6033120..6033128,-#_473f1fde4a22e5ccbf93942e6ef7c001p4@AB527789
8.36e-59FFCP PHASE1:Hg19::chr20:6033120..6033128,-#_473f1fde4a22e5ccbf93942e6ef7c001p4@AB527789
7.62e-57FFCP PHASE1:Hg19::chr7:27219754..27219759,-#_58e6a9b91ae71514a0f484f7198cd997p16@HOXA10
7.62e-57FFCP PHASE2:Hg19::chr7:27219754..27219759,-#_58e6a9b91ae71514a0f484f7198cd997p16@HOXA10
1.32e-55FFCP PHASE1:Hg19::chr21:46826248..46826282,-#_4d6768b9a17fc4dfe2fd6fafc8fa2632p@chr21:46826248..46826282, -
1.32e-55FFCP PHASE2:Hg19::chr21:46826248..46826282,-#_4d6768b9a17fc4dfe2fd6fafc8fa2632p@chr21:46826248..46826282, -
6.62e-55FFCP PHASE2:Hg19::chr2:693362..693373,+#_c0362d9e8d92b7b2f1b5f6281e721439p@chr2:693362..693373, +
6.62e-55FFCP PHASE1:Hg19::chr2:693362..693373,+#_c0362d9e8d92b7b2f1b5f6281e721439p@chr2:693362..693373, +
1.99e-53FFCP PHASE2:Hg19::chr17:36104873..36104903,-#_ff9e22e9bc5ed729477b79c5aadd1f31p3@HNF1B
1.99e-53FFCP PHASE1:Hg19::chr17:36104873..36104903,-#_ff9e22e9bc5ed729477b79c5aadd1f31p3@HNF1B
7.76e-53FFCP PHASE2:Hg19::chr10:102505493..102505546,+#_df9adab73bc5c5cebf5879ec81b42a91p2@PAX2
7.76e-53FFCP PHASE1:Hg19::chr10:102505493..102505546,+#_df9adab73bc5c5cebf5879ec81b42a91p2@PAX2
2.69e-52FFCP PHASE2:Hg19::chr9:71735910..71735923,+#_2216a689ac2988a78c520a54d6fa12f1p16@TJP2
2.69e-52FFCP PHASE1:Hg19::chr9:71735910..71735923,+#_2216a689ac2988a78c520a54d6fa12f1p16@TJP2
1.51e-50FFCP PHASE2:Hg19::chr14:57960456..57960478,-#_3ffeacecd27514ebd4f2f2db68407c1bp2@C14orf105
1.51e-50FFCP PHASE1:Hg19::chr14:57960456..57960478,-#_3ffeacecd27514ebd4f2f2db68407c1bp2@C14orf105
2.93e-50FFCP PHASE1:Hg19::chr3:190105935..190105966,+#_8787d7c41f7b5b6b61e65eb01b40c8cdp1@CLDN16
2.93e-50FFCP PHASE2:Hg19::chr3:190105935..190105966,+#_8787d7c41f7b5b6b61e65eb01b40c8cdp1@CLDN16
4.36e-50FFCP PHASE1:Hg19::chr5:74244100..74244117,+#_a485b86db67af0464256152fec2929b8p@chr5:74244100..74244117, +
4.36e-50FFCP PHASE2:Hg19::chr5:74244100..74244117,+#_a485b86db67af0464256152fec2929b8p@chr5:74244100..74244117, +
4.9e-49FFCP PHASE1:Hg19::chr7:140227303..140227330,-#_131017291313867167e36ee2ccef2131p@chr7:140227303..140227330, -
4.9e-49FFCP PHASE2:Hg19::chr7:140227303..140227330,-#_131017291313867167e36ee2ccef2131p@chr7:140227303..140227330, -
3.7e-48FFCP PHASE1:Hg19::chr7:7606153..7606181,-#_e1f90a87a29b01d2d8f362e053a74076p@chr7:7606153..7606181, -
3.7e-48FFCP PHASE2:Hg19::chr7:7606153..7606181,-#_e1f90a87a29b01d2d8f362e053a74076p@chr7:7606153..7606181, -
8.06e-47FFCP PHASE2:Hg19::chr17:35293932..35293947,-#_d3a8c9be1f1f1a976edfa10d54d23521p2@ENST00000529264
8.06e-47FFCP PHASE1:Hg19::chr17:35293932..35293947,-#_d3a8c9be1f1f1a976edfa10d54d23521p2@ENST00000529264
8.19e-47FFCP PHASE2:Hg19::chr6:24358114..24358125,-#_5ad2ced81d478d05e50730be4efc03ffp4@DCDC2
8.19e-47FFCP PHASE1:Hg19::chr6:24358114..24358125,-#_5ad2ced81d478d05e50730be4efc03ffp4@DCDC2
1.44e-46FFCP PHASE2:Hg19::chr2:177016336..177016350,+#_13580d4d2275b1da009b59443e93154fp1@HOXD4
1.44e-46FFCP PHASE1:Hg19::chr2:177016336..177016350,+#_13580d4d2275b1da009b59443e93154fp1@HOXD4
3.39e-46FFCP PHASE2:Hg19::chr7:27219849..27219867,-#_87c3b365e06ee69939588c556e9c94c1p6@HOXA10
3.39e-46FFCP PHASE1:Hg19::chr7:27219849..27219867,-#_87c3b365e06ee69939588c556e9c94c1p6@HOXA10
5.96e-46FFCP PHASE1:Hg19::chr20:6034576..6034592,-#_0d41329f581e400524055c32be044f33p3@LRRN4
5.96e-46FFCP PHASE2:Hg19::chr20:6034576..6034592,-#_0d41329f581e400524055c32be044f33p3@LRRN4
1.77e-45FFCP PHASE1:Hg19::chr2:165603346..165603357,-#_2d19075d1c141923f254b683a0499b07p@chr2:165603346..165603357, -
1.77e-45FFCP PHASE2:Hg19::chr2:165603346..165603357,-#_2d19075d1c141923f254b683a0499b07-, p@chr2:165603346..165603357
5.1e-45FFCP PHASE2:Hg19::chr6:30890599..30890626,+#_19e13a927c759fc7ae9d81dbd95150efp4@VARS2
5.1e-45FFCP PHASE1:Hg19::chr6:30890599..30890626,+#_19e13a927c759fc7ae9d81dbd95150efp4@VARS2
5.13e-45FFCP PHASE2:Hg19::chr9:133986740..133986750,+#_0dbfb9735ab69a9d0906433c599594ecp7@AIF1L
5.13e-45FFCP PHASE1:Hg19::chr9:133986740..133986750,+#_0dbfb9735ab69a9d0906433c599594ecp7@AIF1L
5.16e-45FFCP PHASE2:Hg19::chr20:62327738..62327751,+#_1dbbfc732b92a2d8fae6d5e3be4f7ea8p2@TNFRSF6B
5.16e-45FFCP PHASE1:Hg19::chr20:62327738..62327751,+#_1dbbfc732b92a2d8fae6d5e3be4f7ea8p2@TNFRSF6B
6.97e-45FFCP PHASE1:Hg19::chr9:112260040..112260045,+#_400632b59a0318733cf3fca4af1a1f5ap@chr9:112260040..112260045, +
6.97e-45FFCP PHASE2:Hg19::chr9:112260040..112260045,+#_400632b59a0318733cf3fca4af1a1f5ap@chr9:112260040..112260045, +
7.39e-45FFCP PHASE2:Hg19::chr20:6034241..6034256,-#_adf52885e250e2c450d52dec3536d2ca-, p@chr20:6034241..6034256
7.39e-45FFCP PHASE1:Hg19::chr20:6034241..6034256,-#_adf52885e250e2c450d52dec3536d2cap@chr20:6034241..6034256, -
1.28e-44FFCP PHASE2:Hg19::chr10:102505312..102505320,+#_a805829427e6028e5457e620b6309b49p6@PAX2
1.28e-44FFCP PHASE1:Hg19::chr10:102505312..102505320,+#_a805829427e6028e5457e620b6309b49p6@PAX2
1.67e-44FFCP PHASE1:Hg19::chr9:119741711..119741743,-#_063fc2caf4b8ad3013b18dda9d974abcp@chr9:119741711..119741743, -
1.67e-44FFCP PHASE2:Hg19::chr9:119741711..119741743,-#_063fc2caf4b8ad3013b18dda9d974abcp@chr9:119741711..119741743, -
4.94e-44FFCP PHASE2:Hg19::chr7:27160553..27160560,+#_c690bda1dd3995a94973a908cd7c3ce1p1@ENST00000523364, p1@uc010kux.1
4.94e-44FFCP PHASE1:Hg19::chr7:27160553..27160560,+#_c690bda1dd3995a94973a908cd7c3ce1p1@ENST00000523364, p1@uc010kux.1
9.32e-44FFCP PHASE1:Hg19::chr11:117688216..117688234,-#_15c8c1ee3a3c045295ceb45948d9b250p2@DSCAML1
9.32e-44FFCP PHASE2:Hg19::chr11:117688216..117688234,-#_15c8c1ee3a3c045295ceb45948d9b250p2@DSCAML1
1.2e-43FFCP PHASE1:Hg19::chr1:47655966..47655990,-#_20cb698e2f26e0820a33e6799ef37368p2@PDZK1IP1
1.2e-43FFCP PHASE2:Hg19::chr1:47655966..47655990,-#_20cb698e2f26e0820a33e6799ef37368p2@PDZK1IP1
1.45e-43FFCP PHASE2:Hg19::chr11:117695245..117695263,-#_ed3074c976eedee9013f536a89ef71c5p7@FXYD2
1.45e-43FFCP PHASE1:Hg19::chr11:117695245..117695263,-#_ed3074c976eedee9013f536a89ef71c5p7@FXYD2
5.15e-43FFCP PHASE1:Hg19::chr10:91043420..91043437,+#_8677a49b791b800ec1f5a0b45454048fp1@ENST00000444849
5.15e-43FFCP PHASE2:Hg19::chr10:91043420..91043437,+#_8677a49b791b800ec1f5a0b45454048fp1@ENST00000444849