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UBERON:0005297

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Name:testis sex cord
Namespace:FANTOM
Definition:"The testis cords are precursors to the rete testis. They play several different roles in the development of the male genitals[WP]." [Wikipedia:Testis_cords]
Xrefs:
links:

EHDAA2:0002011
EHDAA:8152
EMAPA:29098

VHOG:0001321
Synonyms: "primary sex cord" RELATED []
"testis cord" EXACT [MP:0006424]
"testis primary sex cords" EXACT [EHDAA2:0002011]
"testis primitive sex cord" RELATED []
Comments:check primary vs testis

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004910(epithelium of male gonad),UBERON:0005295(sex cord)
develops_from:UBERON:0010141(primitive sex cord of indifferent gonad)
part_of:UBERON:0000473(testis)



Children

develops from:UBERON:0001343 (seminiferous tubule of testis)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005297 (testis sex cord), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr11:27721743..27721753,-#_87e1e8b2ba9c67f5b5f3acbc2a9b5229p26@BDNF
5.42e-195FFCP PHASE2:Hg19::chr11:27721743..27721753,-#_87e1e8b2ba9c67f5b5f3acbc2a9b5229p26@BDNF
9.37e-99FFCP PHASE1:Hg19::chr3:158450428..158450431,-#_2c848ec2f811fd3e84fc74923eb39228p9@RARRES1
9.37e-99FFCP PHASE2:Hg19::chr3:158450428..158450431,-#_2c848ec2f811fd3e84fc74923eb39228p9@RARRES1
9.37e-99FFCP PHASE1:Hg19::chr1:227505905..227505906,-#_2c848ec2f811fd3e84fc74923eb39228p43@CDC42BPA
9.37e-99FFCP PHASE2:Hg19::chr1:227505905..227505906,-#_2c848ec2f811fd3e84fc74923eb39228p43@CDC42BPA
2.55e-98FFCP PHASE2:Hg19::chr7:18206831..18206833,+#_02e89e2ae345893bfe1826e7a1121386p@chr7:18206831..18206833, +
2.55e-98FFCP PHASE1:Hg19::chr8:47529304..47529311,-#_02e89e2ae345893bfe1826e7a1121386p@chr8:47529304..47529311, -
2.55e-98FFCP PHASE2:Hg19::chr8:69832864..69832865,+#_02e89e2ae345893bfe1826e7a1121386p@chr8:69832864..69832865, +
2.55e-98FFCP PHASE1:Hg19::chr19:40320572..40320586,-#_02e89e2ae345893bfe1826e7a1121386p@chr19:40320572..40320586, -
2.55e-98FFCP PHASE1:Hg19::chr7:89874193..89874199,+#_02e89e2ae345893bfe1826e7a1121386p7@C7orf63
2.55e-98FFCP PHASE1:Hg19::chr13:53030077..53030083,-#_02e89e2ae345893bfe1826e7a1121386p@chr13:53030077..53030083, -
2.55e-98FFCP PHASE1:Hg19::chr7:18206831..18206833,+#_02e89e2ae345893bfe1826e7a1121386p@chr7:18206831..18206833, +
2.55e-98FFCP PHASE2:Hg19::chr8:47529304..47529311,-#_02e89e2ae345893bfe1826e7a1121386p@chr8:47529304..47529311, -
2.55e-98FFCP PHASE2:Hg19::chr13:53030077..53030083,-#_02e89e2ae345893bfe1826e7a1121386p@chr13:53030077..53030083, -
2.55e-98FFCP PHASE2:Hg19::chr3:193356854..193356864,+#_02e89e2ae345893bfe1826e7a1121386p@chr3:193356854..193356864, +
2.55e-98FFCP PHASE2:Hg19::chr19:40320572..40320586,-#_02e89e2ae345893bfe1826e7a1121386p@chr19:40320572..40320586, -
2.55e-98FFCP PHASE1:Hg19::chr8:69832864..69832865,+#_02e89e2ae345893bfe1826e7a1121386+, p@chr8:69832864..69832865
2.55e-98FFCP PHASE2:Hg19::chr2:9519086..9519101,+#_02e89e2ae345893bfe1826e7a1121386p@chr2:9519086..9519101, +
2.55e-98FFCP PHASE2:Hg19::chr19:54600897..54600899,+#_02e89e2ae345893bfe1826e7a1121386p@chr19:54600897..54600899, +
2.55e-98FFCP PHASE1:Hg19::chr3:193356854..193356864,+#_02e89e2ae345893bfe1826e7a1121386p@chr3:193356854..193356864, +
2.55e-98FFCP PHASE1:Hg19::chr3:170430340..170430344,+#_02e89e2ae345893bfe1826e7a1121386p@chr3:170430340..170430344, +
2.55e-98FFCP PHASE1:Hg19::chr19:54600897..54600899,+#_02e89e2ae345893bfe1826e7a1121386p@chr19:54600897..54600899, +
2.55e-98FFCP PHASE2:Hg19::chr3:170430340..170430344,+#_02e89e2ae345893bfe1826e7a1121386p@chr3:170430340..170430344, +
2.55e-98FFCP PHASE2:Hg19::chr7:89874193..89874199,+#_02e89e2ae345893bfe1826e7a1121386p7@C7orf63
2.55e-98FFCP PHASE1:Hg19::chr2:9519086..9519101,+#_02e89e2ae345893bfe1826e7a1121386p@chr2:9519086..9519101, +
1.23e-66FFCP PHASE2:Hg19::chr2:19551668..19551679,-#_b7c4e076d66128cecd58faeaa2eeb009p@chr2:19551668..19551679, -
1.23e-66FFCP PHASE1:Hg19::chr2:19551668..19551679,-#_b7c4e076d66128cecd58faeaa2eeb009p@chr2:19551668..19551679, -
2.39e-66FFCP PHASE1:Hg19::chr2:72803155..72803204,-#_1ce7dbe8b0ea85b0c229a490a9248f11p@chr2:72803155..72803204, -
2.39e-66FFCP PHASE1:Hg19::chr1:197889533..197889548,+#_1ce7dbe8b0ea85b0c229a490a9248f11p@chr1:197889533..197889548, +
2.39e-66FFCP PHASE2:Hg19::chr1:197889533..197889548,+#_1ce7dbe8b0ea85b0c229a490a9248f11p@chr1:197889533..197889548, +
2.39e-66FFCP PHASE1:Hg19::chr12:15815732..15815744,-#_1ce7dbe8b0ea85b0c229a490a9248f11p21@EPS8
2.39e-66FFCP PHASE2:Hg19::chr3:112931461..112931474,-#_1ce7dbe8b0ea85b0c229a490a9248f11p@chr3:112931461..112931474, -
2.39e-66FFCP PHASE1:Hg19::chr3:112931461..112931474,-#_1ce7dbe8b0ea85b0c229a490a9248f11p@chr3:112931461..112931474, -
2.39e-66FFCP PHASE2:Hg19::chr7:98445585..98445594,-#_1ce7dbe8b0ea85b0c229a490a9248f11p22@TMEM130
2.39e-66FFCP PHASE1:Hg19::chr7:98445585..98445594,-#_1ce7dbe8b0ea85b0c229a490a9248f11p22@TMEM130
2.39e-66FFCP PHASE2:Hg19::chr12:15815732..15815744,-#_1ce7dbe8b0ea85b0c229a490a9248f11p21@EPS8
2.39e-66FFCP PHASE2:Hg19::chr2:72803155..72803204,-#_1ce7dbe8b0ea85b0c229a490a9248f11p@chr2:72803155..72803204, -
4.66e-66FFCP PHASE1:Hg19::chr5:90830481..90830492,+#_533809c968bb2af477e5ef3f4a98db2fp@chr5:90830481..90830492, +
4.66e-66FFCP PHASE2:Hg19::chr21:48080873..48080878,+#_533809c968bb2af477e5ef3f4a98db2fp@chr21:48080873..48080878, +
4.66e-66FFCP PHASE1:Hg19::chr10:1034666..1034675,+#_533809c968bb2af477e5ef3f4a98db2fp4@GTPBP4
4.66e-66FFCP PHASE1:Hg19::chr8:141728731..141728740,-#_533809c968bb2af477e5ef3f4a98db2fp38@PTK2
4.66e-66FFCP PHASE2:Hg19::chr3:99984127..99984138,+#_533809c968bb2af477e5ef3f4a98db2fp@chr3:99984127..99984138, +
4.66e-66FFCP PHASE2:Hg19::chr10:1034666..1034675,+#_533809c968bb2af477e5ef3f4a98db2fp4@GTPBP4
4.66e-66FFCP PHASE2:Hg19::chr8:141728731..141728740,-#_533809c968bb2af477e5ef3f4a98db2fp38@PTK2
4.66e-66FFCP PHASE1:Hg19::chr3:170916991..170916995,-#_533809c968bb2af477e5ef3f4a98db2fp@chr3:170916991..170916995, -
4.66e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_533809c968bb2af477e5ef3f4a98db2fp@chr5:75912402..75912418, -
4.66e-66FFCP PHASE2:Hg19::chr5:90830481..90830492,+#_533809c968bb2af477e5ef3f4a98db2fp@chr5:90830481..90830492, +
4.66e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_533809c968bb2af477e5ef3f4a98db2fp@chr5:75912402..75912418, -
4.66e-66FFCP PHASE1:Hg19::chr21:48080873..48080878,+#_533809c968bb2af477e5ef3f4a98db2fp@chr21:48080873..48080878, +
4.66e-66FFCP PHASE1:Hg19::chr3:99984127..99984138,+#_533809c968bb2af477e5ef3f4a98db2fp@chr3:99984127..99984138, +
4.66e-66FFCP PHASE2:Hg19::chr3:170916991..170916995,-#_533809c968bb2af477e5ef3f4a98db2fp@chr3:170916991..170916995, -
6.41e-58FFCP PHASE2:Mm9::chr18:44264202..44264213,+#_30416e606338bad67b34b7a42ee0f4a6p4@Spink12
6.41e-58FFCP PHASE1:Mm9::chr18:44264202..44264213,+#_30416e606338bad67b34b7a42ee0f4a6p4@Spink12
1.46e-50FFCP PHASE2:Hg19::chr11:114173606..114173612,+#_9fa0e3e54a492b1916e1ab0b1476f91fp@chr11:114173606..114173612, +
1.46e-50FFCP PHASE2:Hg19::chr6:134210772..134210782,+#_9fa0e3e54a492b1916e1ab0b1476f91fp8@TCF21
1.46e-50FFCP PHASE1:Hg19::chr6:134210772..134210782,+#_9fa0e3e54a492b1916e1ab0b1476f91fp8@TCF21
1.46e-50FFCP PHASE2:Hg19::chr2:177009137..177009140,+#_9fa0e3e54a492b1916e1ab0b1476f91fp@chr2:177009137..177009140, +
1.46e-50FFCP PHASE1:Hg19::chr2:177009137..177009140,+#_9fa0e3e54a492b1916e1ab0b1476f91fp@chr2:177009137..177009140, +
1.46e-50FFCP PHASE1:Hg19::chr11:114173606..114173612,+#_9fa0e3e54a492b1916e1ab0b1476f91fp@chr11:114173606..114173612, +
2.42e-50FFCP PHASE1:Hg19::chr7:137564648..137564658,-#_0b16ad061bde10557ede4f8de44a078ep32@CREB3L2
2.42e-50FFCP PHASE2:Hg19::chr3:46477553..46477563,-#_0b16ad061bde10557ede4f8de44a078ep@chr3:46477553..46477563, -
2.42e-50FFCP PHASE1:Hg19::chr3:46477553..46477563,-#_0b16ad061bde10557ede4f8de44a078e-, p@chr3:46477553..46477563
2.42e-50FFCP PHASE2:Hg19::chr15:39288691..39288698,+#_0b16ad061bde10557ede4f8de44a078ep@chr15:39288691..39288698, +
2.42e-50FFCP PHASE2:Hg19::chr2:55459485..55459491,-#_0b16ad061bde10557ede4f8de44a078ep6@C2orf63
2.42e-50FFCP PHASE2:Hg19::chr7:137564648..137564658,-#_0b16ad061bde10557ede4f8de44a078ep32@CREB3L2
2.42e-50FFCP PHASE1:Hg19::chr2:55459485..55459491,-#_0b16ad061bde10557ede4f8de44a078ep6@C2orf63
2.42e-50FFCP PHASE1:Hg19::chr21:17214724..17214740,+#_0b16ad061bde10557ede4f8de44a078ep11@USP25
2.42e-50FFCP PHASE1:Hg19::chr19:54024454..54024463,+#_0b16ad061bde10557ede4f8de44a078ep31@ZNF331
2.42e-50FFCP PHASE1:Hg19::chr15:39288691..39288698,+#_0b16ad061bde10557ede4f8de44a078ep@chr15:39288691..39288698, +
2.42e-50FFCP PHASE2:Hg19::chr21:17214724..17214740,+#_0b16ad061bde10557ede4f8de44a078ep11@USP25
2.42e-50FFCP PHASE2:Hg19::chr19:54024454..54024463,+#_0b16ad061bde10557ede4f8de44a078ep31@ZNF331
2.42e-50FFCP PHASE1:Hg19::chr5:144875561..144875565,+#_0b16ad061bde10557ede4f8de44a078ep@chr5:144875561..144875565, +
2.42e-50FFCP PHASE2:Hg19::chr5:144875561..144875565,+#_0b16ad061bde10557ede4f8de44a078ep@chr5:144875561..144875565, +
3.99e-50FFCP PHASE1:Hg19::chr15:39420650..39420666,+#_7a0390d7aaab3e96de7b11f3b157f105p@chr15:39420650..39420666, +
3.99e-50FFCP PHASE1:Hg19::chr14:64804787..64804796,-#_7a0390d7aaab3e96de7b11f3b157f105p10@ESR2
3.99e-50FFCP PHASE2:Hg19::chr4:103969123..103969127,-#_7a0390d7aaab3e96de7b11f3b157f105p@chr4:103969123..103969127, -
3.99e-50FFCP PHASE1:Hg19::chr12:5198350..5198359,+#_7a0390d7aaab3e96de7b11f3b157f105p@chr12:5198350..5198359, +
3.99e-50FFCP PHASE1:Hg19::chr11:829412..829430,+#_7a0390d7aaab3e96de7b11f3b157f105p11@EFCAB4A
3.99e-50FFCP PHASE2:Hg19::chr14:64804787..64804796,-#_7a0390d7aaab3e96de7b11f3b157f105p10@ESR2
3.99e-50FFCP PHASE2:Hg19::chr11:829412..829430,+#_7a0390d7aaab3e96de7b11f3b157f105p11@EFCAB4A
3.99e-50FFCP PHASE2:Hg19::chr15:39420650..39420666,+#_7a0390d7aaab3e96de7b11f3b157f105p@chr15:39420650..39420666, +
3.99e-50FFCP PHASE1:Hg19::chr4:103969123..103969127,-#_7a0390d7aaab3e96de7b11f3b157f105p@chr4:103969123..103969127, -
3.99e-50FFCP PHASE2:Hg19::chr12:5198350..5198359,+#_7a0390d7aaab3e96de7b11f3b157f105p@chr12:5198350..5198359, +
6.58e-50FFCP PHASE2:Hg19::chr14:50697797..50697820,-#_14be21abe318274a8184bce751aa1a15p13@SOS2
6.58e-50FFCP PHASE1:Hg19::chr14:50697797..50697820,-#_14be21abe318274a8184bce751aa1a15p13@SOS2
6.58e-50FFCP PHASE1:Hg19::chr17:58165788..58165794,-#_14be21abe318274a8184bce751aa1a15p1@LOC645638
6.58e-50FFCP PHASE1:Hg19::chr16:1203194..1203207,+#_14be21abe318274a8184bce751aa1a15p3@CACNA1H
6.58e-50FFCP PHASE2:Hg19::chr17:58165788..58165794,-#_14be21abe318274a8184bce751aa1a15p1@LOC645638
6.58e-50FFCP PHASE2:Hg19::chr7:92462738..92462749,-#_14be21abe318274a8184bce751aa1a15p51@CDK6
6.58e-50FFCP PHASE1:Hg19::chr7:92462738..92462749,-#_14be21abe318274a8184bce751aa1a15p51@CDK6
6.58e-50FFCP PHASE2:Hg19::chr16:1203194..1203207,+#_14be21abe318274a8184bce751aa1a15p3@CACNA1H
4.52e-44FFCP PHASE1:Mm9::chr17:75581992..75582009,+#_0ff38299243207f8aca52774a39d2607p@chr17:75581992..75582009, +
4.52e-44FFCP PHASE2:Mm9::chr17:75581992..75582009,+#_0ff38299243207f8aca52774a39d2607p@chr17:75581992..75582009, +
6.62e-41FFCP PHASE1:Hg19::chr3:194214959..194214968,-#_abc4f84780d2988fed287c5f6879aed0p@chr3:194214959..194214968, -
6.62e-41FFCP PHASE2:Hg19::chr3:194214959..194214968,-#_abc4f84780d2988fed287c5f6879aed0p@chr3:194214959..194214968, -
9.91e-41FFCP PHASE2:Hg19::chr8:125193673..125193689,-#_c059a5f243e8017531074f815ec54d6ep@chr8:125193673..125193689, -
9.91e-41FFCP PHASE2:Hg19::chr2:102604493..102604499,+#_c059a5f243e8017531074f815ec54d6ep@chr2:102604493..102604499, +
9.91e-41FFCP PHASE1:Hg19::chr22:44377278..44377303,+#_c059a5f243e8017531074f815ec54d6ep@chr22:44377278..44377303, +
9.91e-41FFCP PHASE2:Hg19::chr9:114135497..114135526,-#_c059a5f243e8017531074f815ec54d6ep@chr9:114135497..114135526, -