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UBERON:0005396

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Name:carotid artery segment
Namespace:FANTOM
Definition:"One of: the common carotid artery, or its branches, the external and internal carotid arteries." [https://sourceforge.net/tracker/?func
Xrefs:
links:

BTO:0000168
EFO:0000818
EHDAA:6385
EMAPA:18609
EV:0100379
FMA:70504
GAID:478
galen:CarotidArtery
MA:0001925
MAT:0000501
MESH:A.07.231.114.186
ncithesaurus:Carotid_Artery
OpenCyc:Mx4rvg7rcJwpEbGdrcN5Y29ycA
SCTID:362040006
SCTID:69105007
TAO:0000097
VHOG:0000266

ZFA:0000097
Synonyms: "carotid artery" EXACT [MA:0001925]
"subdivision of common carotid artery" EXACT [FMA:70504]
Comments:Editor/usage notes: This is a generic grouping class that is the superclass of the trunks/branches of the common carotid artery. Note that AOs vary widely in how they divide up and generalize arteries
Subset: grouping_class
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data

Parents

is_a:UBERON:0004573(systemic artery)



Children

part of:CL:0002596 (smooth muscle cell of the carotid artery)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005396 (carotid artery segment), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
4.52e-50FFCP PHASE1:Hg19::chr1:169985638..169985652,-#_8e5ae667f19c44935451dfb0005dd386p@chr1:169985638..169985652, -
4.52e-50FFCP PHASE2:Hg19::chr1:169985638..169985652,-#_8e5ae667f19c44935451dfb0005dd386p@chr1:169985638..169985652, -
5.04e-34FFCP PHASE2:Hg19::chr1:25046857..25046871,+#_3ced82e99c07dc96e8333eb4bc2b2b76p@chr1:25046857..25046871, +
5.04e-34FFCP PHASE1:Hg19::chr1:25046857..25046871,+#_3ced82e99c07dc96e8333eb4bc2b2b76p@chr1:25046857..25046871, +
5.04e-34FFCP PHASE1:Hg19::chr7:120725207..120725210,+#_3ced82e99c07dc96e8333eb4bc2b2b76p@chr7:120725207..120725210, +
5.04e-34FFCP PHASE2:Hg19::chr7:120725207..120725210,+#_3ced82e99c07dc96e8333eb4bc2b2b76p@chr7:120725207..120725210, +
1.87e-31FFCP PHASE2:Hg19::chr21:30006488..30006499,+#_6c13b732fd80f0ffe219122fd3fb1e95p@chr21:30006488..30006499, +
1.87e-31FFCP PHASE1:Hg19::chr21:30006488..30006499,+#_6c13b732fd80f0ffe219122fd3fb1e95p@chr21:30006488..30006499, +
2.18e-31FFCP PHASE2:Hg19::chr17:80575169..80575172,-#_16647e97c902df034738d15c9e111be4p@chr17:80575169..80575172, -
2.18e-31FFCP PHASE1:Hg19::chr17:80575169..80575172,-#_16647e97c902df034738d15c9e111be4p@chr17:80575169..80575172, -
4.32e-26FFCP PHASE2:Hg19::chr7:82172409..82172413,+#_024d5711cd12a0ceed6a2b65817f32f8p@chr7:82172409..82172413, +
4.32e-26FFCP PHASE1:Hg19::chr7:82172409..82172413,+#_024d5711cd12a0ceed6a2b65817f32f8p@chr7:82172409..82172413, +
5.56e-26FFCP PHASE1:Hg19::chr9:114720368..114720377,-#_fa96b2b7c25e9b9d1cb98cdb7fc3ec04p@chr9:114720368..114720377, -
5.56e-26FFCP PHASE2:Hg19::chr9:114720368..114720377,-#_fa96b2b7c25e9b9d1cb98cdb7fc3ec04p@chr9:114720368..114720377, -
7.14e-26FFCP PHASE2:Hg19::chr12:6806552..6806592,-#_4169fa4195ef5ed88558837220ec6aa4p@chr12:6806552..6806592, -
7.14e-26FFCP PHASE1:Hg19::chr12:6806552..6806592,-#_4169fa4195ef5ed88558837220ec6aa4p@chr12:6806552..6806592, -
7.14e-26FFCP PHASE2:Hg19::chr11:120317216..120317220,+#_4169fa4195ef5ed88558837220ec6aa4p@chr11:120317216..120317220, +
7.14e-26FFCP PHASE1:Hg19::chr11:120317216..120317220,+#_4169fa4195ef5ed88558837220ec6aa4p@chr11:120317216..120317220, +
7.14e-26FFCP PHASE2:Hg19::chr6:136397717..136397720,-#_4169fa4195ef5ed88558837220ec6aa4-, p@chr6:136397717..136397720
7.14e-26FFCP PHASE1:Hg19::chr6:136397717..136397720,-#_4169fa4195ef5ed88558837220ec6aa4p@chr6:136397717..136397720, -
3.53e-22FFCP PHASE1:Hg19::chr19:42724302..42724313,-#_f7c40083f9df332d5ac43f6206b6dca9p4@DEDD2
3.53e-22FFCP PHASE2:Hg19::chr19:42724302..42724313,-#_f7c40083f9df332d5ac43f6206b6dca9p4@DEDD2
1.01e-21FFCP PHASE2:Hg19::chr21:47539028..47539037,+#_b1e2d2edd6253b97e477996b2a6fcb6dp@chr21:47539028..47539037, +
1.01e-21FFCP PHASE1:Hg19::chr21:47539028..47539037,+#_b1e2d2edd6253b97e477996b2a6fcb6dp@chr21:47539028..47539037, +
3.81e-21FFCP PHASE2:Hg19::chr3:51429598..51429609,+#_639536d8ded5afd7ddd79d315e7d88cfp12@RBM15B
3.81e-21FFCP PHASE2:Hg19::chr22:36727653..36727660,-#_639536d8ded5afd7ddd79d315e7d88cfp@chr22:36727653..36727660, -
3.81e-21FFCP PHASE1:Hg19::chr22:36727653..36727660,-#_639536d8ded5afd7ddd79d315e7d88cf-, p@chr22:36727653..36727660
3.81e-21FFCP PHASE1:Hg19::chr2:216578345..216578377,+#_639536d8ded5afd7ddd79d315e7d88cfp@chr2:216578345..216578377, +
3.81e-21FFCP PHASE1:Hg19::chr3:51429598..51429609,+#_639536d8ded5afd7ddd79d315e7d88cfp12@RBM15B
3.81e-21FFCP PHASE2:Hg19::chr2:216578345..216578377,+#_639536d8ded5afd7ddd79d315e7d88cfp@chr2:216578345..216578377, +
4.66e-21FFCP PHASE2:Hg19::chr1:25046892..25046903,+#_40ea46112a6fa5cd4051c4c93e011849p@chr1:25046892..25046903, +
4.66e-21FFCP PHASE1:Hg19::chr1:25046892..25046903,+#_40ea46112a6fa5cd4051c4c93e011849p@chr1:25046892..25046903, +
5.7e-21FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_f919f90d06fdd48bb2a101b0f1f4d656p6@HYI
5.7e-21FFCP PHASE2:Hg19::chr12:65959570..65959573,-#_f919f90d06fdd48bb2a101b0f1f4d656p@chr12:65959570..65959573, -
5.7e-21FFCP PHASE2:Hg19::chr12:57628774..57628785,-#_f919f90d06fdd48bb2a101b0f1f4d656p@chr12:57628774..57628785, -
5.7e-21FFCP PHASE1:Hg19::chr12:65959570..65959573,-#_f919f90d06fdd48bb2a101b0f1f4d656p@chr12:65959570..65959573, -
5.7e-21FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_f919f90d06fdd48bb2a101b0f1f4d656p6@HYI
5.7e-21FFCP PHASE1:Hg19::chr12:57628774..57628785,-#_f919f90d06fdd48bb2a101b0f1f4d656p@chr12:57628774..57628785, -
2.26e-20FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_6af0de23508766030fa74ff795183fa6p@chr2:134548872..134548879, -
2.26e-20FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_6af0de23508766030fa74ff795183fa6p@chr2:134548872..134548879, -
1.24e-19FFCP PHASE2:Hg19::chr12:122261654..122261658,+#_3d9e86ef4e1da224f650ba45292d7234p@chr12:122261654..122261658, +
1.24e-19FFCP PHASE1:Hg19::chr12:122261654..122261658,+#_3d9e86ef4e1da224f650ba45292d7234p@chr12:122261654..122261658, +
8.4e-19FFCP PHASE2:Hg19::chr12:12939901..12939915,-#_2f13e4df1e102264adf3b15548e9f1afp@chr12:12939901..12939915, -
8.4e-19FFCP PHASE1:Hg19::chr12:12939901..12939915,-#_2f13e4df1e102264adf3b15548e9f1af-, p@chr12:12939901..12939915
3.16e-18FFCP PHASE1:Hg19::chr11:122073019..122073034,-#_7e4b829754fd95414e6721c181aeb5bfp@chr11:122073019..122073034, -
3.16e-18FFCP PHASE2:Hg19::chr11:122073019..122073034,-#_7e4b829754fd95414e6721c181aeb5bfp@chr11:122073019..122073034, -
5.48e-18FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_7f9c95a81937b00209a05239d48582a6p@chr4:169022528..169022531, +
5.48e-18FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_7f9c95a81937b00209a05239d48582a6p@chr4:169022528..169022531, +
6.27e-18FFCP PHASE2:Hg19::chr2:47109897..47109901,+#_58fbc993111851a5a795c36d856ee9a0p@chr2:47109897..47109901, +
6.27e-18FFCP PHASE1:Hg19::chr2:47109897..47109901,+#_58fbc993111851a5a795c36d856ee9a0p@chr2:47109897..47109901, +
6.48e-18FFCP PHASE1:Hg19::chr6:27198375..27198387,-#_c18359f44e81a18963d30499a91c5f83p@chr6:27198375..27198387, -
6.48e-18FFCP PHASE2:Hg19::chr6:27198375..27198387,-#_c18359f44e81a18963d30499a91c5f83p@chr6:27198375..27198387, -
6.48e-18FFCP PHASE2:Hg19::chr2:85173188..85173189,-#_c18359f44e81a18963d30499a91c5f83p@chr2:85173188..85173189, -
6.48e-18FFCP PHASE1:Hg19::chr2:85173188..85173189,-#_c18359f44e81a18963d30499a91c5f83p@chr2:85173188..85173189, -
7.67e-18FFCP PHASE2:Hg19::chr9:33797953..33797969,+#_aeca0d1ec22e1376758e8b44c99fe5f1p@chr9:33797953..33797969, +
7.67e-18FFCP PHASE1:Hg19::chr9:33797953..33797969,+#_aeca0d1ec22e1376758e8b44c99fe5f1p@chr9:33797953..33797969, +
1.62e-17FFCP PHASE2:Hg19::chr16:89595986..89595990,+#_91c55e04e2050bba1afe50a0be2188efp@chr16:89595986..89595990, +
1.62e-17FFCP PHASE1:Hg19::chr16:89595986..89595990,+#_91c55e04e2050bba1afe50a0be2188efp@chr16:89595986..89595990, +
2.99e-16FFCP PHASE2:Hg19::chr17:40672344..40672359,+#_ef9378544bd8fe4752376e14065eca74p4@ATP6V0A1
2.99e-16FFCP PHASE1:Hg19::chr17:40672344..40672359,+#_ef9378544bd8fe4752376e14065eca74p4@ATP6V0A1
4.79e-16FFCP PHASE2:Hg19::chr12:127768750..127768765,+#_76e85e406232080e5b747655cb9ad235p@chr12:127768750..127768765, +
4.79e-16FFCP PHASE1:Hg19::chr12:127768750..127768765,+#_76e85e406232080e5b747655cb9ad235p@chr12:127768750..127768765, +
1.15e-15FFCP PHASE2:Hg19::chr1:155932380..155932384,-#_a6fa455f3f92401fed2cf7d77185e4c8p45@ARHGEF2
1.15e-15FFCP PHASE1:Hg19::chr1:155932380..155932384,-#_a6fa455f3f92401fed2cf7d77185e4c8p45@ARHGEF2
1.33e-15FFCP PHASE1:Hg19::chr15:80841630..80841633,-#_1ed15c10674ca0c1abcccd4eced62ea7p@chr15:80841630..80841633, -
1.33e-15FFCP PHASE2:Hg19::chr15:80841630..80841633,-#_1ed15c10674ca0c1abcccd4eced62ea7p@chr15:80841630..80841633, -
1.54e-15FFCP PHASE2:Hg19::chr21:26713474..26713508,-#_f093c1071378abb60e7693dc04f84fa2p@chr21:26713474..26713508, -
1.54e-15FFCP PHASE2:Hg19::chr9:118431048..118431059,+#_f093c1071378abb60e7693dc04f84fa2p@chr9:118431048..118431059, +
1.54e-15FFCP PHASE1:Hg19::chr21:26713474..26713508,-#_f093c1071378abb60e7693dc04f84fa2p@chr21:26713474..26713508, -
1.54e-15FFCP PHASE1:Hg19::chr9:118431048..118431059,+#_f093c1071378abb60e7693dc04f84fa2p@chr9:118431048..118431059, +
1.78e-15FFCP PHASE1:Hg19::chr12:65959975..65959997,+#_22d00fa7782d5b969db9ddbbed02b03cp@chr12:65959975..65959997, +
1.78e-15FFCP PHASE2:Hg19::chr12:65959975..65959997,+#_22d00fa7782d5b969db9ddbbed02b03c+, p@chr12:65959975..65959997
2.05e-15FFCP PHASE1:Hg19::chr18:52495549..52495589,-#_8bd6190603a03bdb3cce820c578890f0p@chr18:52495549..52495589, -
2.05e-15FFCP PHASE2:Hg19::chr18:52495549..52495589,-#_8bd6190603a03bdb3cce820c578890f0p@chr18:52495549..52495589, -
3.37e-15FFCP PHASE1:Hg19::chr7:27154961..27154973,+#_b4d2aa2f5260a69ce6dc1895755b1056p1@ENST00000517635
3.37e-15FFCP PHASE2:Hg19::chr7:27154961..27154973,+#_b4d2aa2f5260a69ce6dc1895755b1056p1@ENST00000517635
3.46e-15FFCP PHASE2:Hg19::chr12:63097437..63097440,-#_b00d83f2770e48306440e6a46051eca0p@chr12:63097437..63097440, -
3.46e-15FFCP PHASE1:Hg19::chr12:63097437..63097440,-#_b00d83f2770e48306440e6a46051eca0p@chr12:63097437..63097440, -
3.99e-15FFCP PHASE1:Hg19::chr12:69633237..69633264,-#_135eeb49cbdef214bf367023a9b285adp@chr12:69633237..69633264, -
3.99e-15FFCP PHASE2:Hg19::chr12:69633237..69633264,-#_135eeb49cbdef214bf367023a9b285adp@chr12:69633237..69633264, -
5.52e-15FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_b363336e32a483294fffc70a80f4fc67+, p@chr3:106484411..106484418
5.52e-15FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_b363336e32a483294fffc70a80f4fc67p@chr3:106484411..106484418, +
9.65e-15FFCP PHASE2:Hg19::chr2:33437467..33437488,+#_1a082ee50e95813aaacfe25ec710cb53p@chr2:33437467..33437488, +
9.65e-15FFCP PHASE1:Hg19::chr2:33437467..33437488,+#_1a082ee50e95813aaacfe25ec710cb53p@chr2:33437467..33437488, +
2.21e-14FFCP PHASE2:Hg19::chr20:48140671..48140693,-#_5dc2e48e2f4c7dc0d23ed91a5db9e07dp@chr20:48140671..48140693, -
2.21e-14FFCP PHASE1:Hg19::chr20:48140671..48140693,-#_5dc2e48e2f4c7dc0d23ed91a5db9e07dp@chr20:48140671..48140693, -
5.44e-14FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_00c3051944ff430ee4f7fa60b6cb74d9p8@MICAL2
5.44e-14FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_00c3051944ff430ee4f7fa60b6cb74d9p8@MICAL2
7.07e-14FFCP PHASE1:Hg19::chr4:74736899..74736917,+#_70f624f2e502b87d6e097ae197e5ba13p@chr4:74736899..74736917, +
7.07e-14FFCP PHASE2:Hg19::chr4:74736899..74736917,+#_70f624f2e502b87d6e097ae197e5ba13p@chr4:74736899..74736917, +
8.06e-14FFCP PHASE1:Hg19::chr1:32257811..32257816,-#_db8e883d9f3cfb321d6b5be03944526ep1@BC098449
8.06e-14FFCP PHASE2:Hg19::chr1:32257811..32257816,-#_db8e883d9f3cfb321d6b5be03944526ep1@BC098449
8.28e-14FFCP PHASE2:Hg19::chr11:5385751..5385762,+#_fabc773f432f931b66cafd475616c5e9p@chr11:5385751..5385762, +
8.28e-14FFCP PHASE2:Hg19::chr13:52027062..52027077,-#_fabc773f432f931b66cafd475616c5e9p13@INTS6
8.28e-14FFCP PHASE1:Hg19::chr11:5385751..5385762,+#_fabc773f432f931b66cafd475616c5e9p@chr11:5385751..5385762, +
8.28e-14FFCP PHASE1:Hg19::chr13:52027062..52027077,-#_fabc773f432f931b66cafd475616c5e9p13@INTS6
1.07e-13FFCP PHASE1:Hg19::chr11:1006616..1006623,+#_ecac2c78bd51891ef9f4caf9395115c7p6@AP2A2
1.07e-13FFCP PHASE2:Hg19::chr12:66009286..66009299,+#_ecac2c78bd51891ef9f4caf9395115c7p@chr12:66009286..66009299, +
1.07e-13FFCP PHASE1:Hg19::chr12:66009286..66009299,+#_ecac2c78bd51891ef9f4caf9395115c7p@chr12:66009286..66009299, +
1.07e-13FFCP PHASE1:Hg19::chr16:59666186..59666189,-#_ecac2c78bd51891ef9f4caf9395115c7p@chr16:59666186..59666189, -










Property "Property value" (as page type) with input value "UBPROP:0000001 "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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