UBERON:0005396
From FANTOM5_SSTAR
Name: | carotid artery segment | ||
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Namespace: | FANTOM | ||
Definition: | "One of: the common carotid artery, or its branches, the external and internal carotid arteries." [https://sourceforge.net/tracker/?func | ||
Xrefs: |
| ||
Synonyms: |
"carotid artery" EXACT [MA:0001925] "subdivision of common carotid artery" EXACT [FMA:70504] | ||
Comments: | Editor/usage notes: This is a generic grouping class that is the superclass of the trunks/branches of the common carotid artery. Note that AOs vary widely in how they divide up and generalize arteries | ||
Subset: |
grouping_class vertebrate_core |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0004573(systemic artery) |
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Children
part of: | CL:0002596 (smooth muscle cell of the carotid artery) |
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Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11285-116I7 (Smooth Muscle Cells - Carotid, donor1)
- 11362-117I3 (Smooth Muscle Cells - Carotid, donor2)
- 11434-118H3 (Smooth Muscle Cells - Carotid, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005396 (carotid artery segment), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
4.52e-50 | FFCP PHASE2:Hg19::chr1:169985638..169985652,-#_8e5ae667f19c44935451dfb0005dd386 | p@chr1:169985638..169985652, - |
4.52e-50 | FFCP PHASE1:Hg19::chr1:169985638..169985652,-#_8e5ae667f19c44935451dfb0005dd386 | p@chr1:169985638..169985652, - |
5.04e-34 | FFCP PHASE2:Hg19::chr1:25046857..25046871,+#_3ced82e99c07dc96e8333eb4bc2b2b76 | p@chr1:25046857..25046871, + |
5.04e-34 | FFCP PHASE1:Hg19::chr1:25046857..25046871,+#_3ced82e99c07dc96e8333eb4bc2b2b76 | p@chr1:25046857..25046871, + |
5.04e-34 | FFCP PHASE2:Hg19::chr7:120725207..120725210,+#_3ced82e99c07dc96e8333eb4bc2b2b76 | p@chr7:120725207..120725210, + |
5.04e-34 | FFCP PHASE1:Hg19::chr7:120725207..120725210,+#_3ced82e99c07dc96e8333eb4bc2b2b76 | p@chr7:120725207..120725210, + |
1.87e-31 | FFCP PHASE2:Hg19::chr21:30006488..30006499,+#_6c13b732fd80f0ffe219122fd3fb1e95 | p@chr21:30006488..30006499, + |
1.87e-31 | FFCP PHASE1:Hg19::chr21:30006488..30006499,+#_6c13b732fd80f0ffe219122fd3fb1e95 | p@chr21:30006488..30006499, + |
2.18e-31 | FFCP PHASE1:Hg19::chr17:80575169..80575172,-#_16647e97c902df034738d15c9e111be4 | p@chr17:80575169..80575172, - |
2.18e-31 | FFCP PHASE2:Hg19::chr17:80575169..80575172,-#_16647e97c902df034738d15c9e111be4 | p@chr17:80575169..80575172, - |
4.32e-26 | FFCP PHASE2:Hg19::chr7:82172409..82172413,+#_024d5711cd12a0ceed6a2b65817f32f8 | p@chr7:82172409..82172413, + |
4.32e-26 | FFCP PHASE1:Hg19::chr7:82172409..82172413,+#_024d5711cd12a0ceed6a2b65817f32f8 | p@chr7:82172409..82172413, + |
5.56e-26 | FFCP PHASE2:Hg19::chr9:114720368..114720377,-#_fa96b2b7c25e9b9d1cb98cdb7fc3ec04 | p@chr9:114720368..114720377, - |
5.56e-26 | FFCP PHASE1:Hg19::chr9:114720368..114720377,-#_fa96b2b7c25e9b9d1cb98cdb7fc3ec04 | p@chr9:114720368..114720377, - |
7.14e-26 | FFCP PHASE2:Hg19::chr6:136397717..136397720,-#_4169fa4195ef5ed88558837220ec6aa4 | -, p@chr6:136397717..136397720 |
7.14e-26 | FFCP PHASE1:Hg19::chr11:120317216..120317220,+#_4169fa4195ef5ed88558837220ec6aa4 | p@chr11:120317216..120317220, + |
7.14e-26 | FFCP PHASE2:Hg19::chr11:120317216..120317220,+#_4169fa4195ef5ed88558837220ec6aa4 | p@chr11:120317216..120317220, + |
7.14e-26 | FFCP PHASE1:Hg19::chr12:6806552..6806592,-#_4169fa4195ef5ed88558837220ec6aa4 | p@chr12:6806552..6806592, - |
7.14e-26 | FFCP PHASE1:Hg19::chr6:136397717..136397720,-#_4169fa4195ef5ed88558837220ec6aa4 | p@chr6:136397717..136397720, - |
7.14e-26 | FFCP PHASE2:Hg19::chr12:6806552..6806592,-#_4169fa4195ef5ed88558837220ec6aa4 | p@chr12:6806552..6806592, - |
3.53e-22 | FFCP PHASE2:Hg19::chr19:42724302..42724313,-#_f7c40083f9df332d5ac43f6206b6dca9 | p4@DEDD2 |
3.53e-22 | FFCP PHASE1:Hg19::chr19:42724302..42724313,-#_f7c40083f9df332d5ac43f6206b6dca9 | p4@DEDD2 |
1.01e-21 | FFCP PHASE2:Hg19::chr21:47539028..47539037,+#_b1e2d2edd6253b97e477996b2a6fcb6d | p@chr21:47539028..47539037, + |
1.01e-21 | FFCP PHASE1:Hg19::chr21:47539028..47539037,+#_b1e2d2edd6253b97e477996b2a6fcb6d | p@chr21:47539028..47539037, + |
3.81e-21 | FFCP PHASE2:Hg19::chr22:36727653..36727660,-#_639536d8ded5afd7ddd79d315e7d88cf | p@chr22:36727653..36727660, - |
3.81e-21 | FFCP PHASE2:Hg19::chr3:51429598..51429609,+#_639536d8ded5afd7ddd79d315e7d88cf | p12@RBM15B |
3.81e-21 | FFCP PHASE1:Hg19::chr2:216578345..216578377,+#_639536d8ded5afd7ddd79d315e7d88cf | p@chr2:216578345..216578377, + |
3.81e-21 | FFCP PHASE1:Hg19::chr22:36727653..36727660,-#_639536d8ded5afd7ddd79d315e7d88cf | -, p@chr22:36727653..36727660 |
3.81e-21 | FFCP PHASE1:Hg19::chr3:51429598..51429609,+#_639536d8ded5afd7ddd79d315e7d88cf | p12@RBM15B |
3.81e-21 | FFCP PHASE2:Hg19::chr2:216578345..216578377,+#_639536d8ded5afd7ddd79d315e7d88cf | p@chr2:216578345..216578377, + |
4.66e-21 | FFCP PHASE2:Hg19::chr1:25046892..25046903,+#_40ea46112a6fa5cd4051c4c93e011849 | p@chr1:25046892..25046903, + |
4.66e-21 | FFCP PHASE1:Hg19::chr1:25046892..25046903,+#_40ea46112a6fa5cd4051c4c93e011849 | p@chr1:25046892..25046903, + |
5.7e-21 | FFCP PHASE1:Hg19::chr12:65959570..65959573,-#_f919f90d06fdd48bb2a101b0f1f4d656 | p@chr12:65959570..65959573, - |
5.7e-21 | FFCP PHASE1:Hg19::chr1:43917566..43917577,-#_f919f90d06fdd48bb2a101b0f1f4d656 | p6@HYI |
5.7e-21 | FFCP PHASE1:Hg19::chr12:57628774..57628785,-#_f919f90d06fdd48bb2a101b0f1f4d656 | p@chr12:57628774..57628785, - |
5.7e-21 | FFCP PHASE2:Hg19::chr12:65959570..65959573,-#_f919f90d06fdd48bb2a101b0f1f4d656 | p@chr12:65959570..65959573, - |
5.7e-21 | FFCP PHASE2:Hg19::chr12:57628774..57628785,-#_f919f90d06fdd48bb2a101b0f1f4d656 | p@chr12:57628774..57628785, - |
5.7e-21 | FFCP PHASE2:Hg19::chr1:43917566..43917577,-#_f919f90d06fdd48bb2a101b0f1f4d656 | p6@HYI |
2.26e-20 | FFCP PHASE1:Hg19::chr2:134548872..134548879,-#_6af0de23508766030fa74ff795183fa6 | p@chr2:134548872..134548879, - |
2.26e-20 | FFCP PHASE2:Hg19::chr2:134548872..134548879,-#_6af0de23508766030fa74ff795183fa6 | p@chr2:134548872..134548879, - |
1.24e-19 | FFCP PHASE1:Hg19::chr12:122261654..122261658,+#_3d9e86ef4e1da224f650ba45292d7234 | p@chr12:122261654..122261658, + |
1.24e-19 | FFCP PHASE2:Hg19::chr12:122261654..122261658,+#_3d9e86ef4e1da224f650ba45292d7234 | p@chr12:122261654..122261658, + |
8.4e-19 | FFCP PHASE1:Hg19::chr12:12939901..12939915,-#_2f13e4df1e102264adf3b15548e9f1af | -, p@chr12:12939901..12939915 |
8.4e-19 | FFCP PHASE2:Hg19::chr12:12939901..12939915,-#_2f13e4df1e102264adf3b15548e9f1af | p@chr12:12939901..12939915, - |
3.16e-18 | FFCP PHASE1:Hg19::chr11:122073019..122073034,-#_7e4b829754fd95414e6721c181aeb5bf | p@chr11:122073019..122073034, - |
3.16e-18 | FFCP PHASE2:Hg19::chr11:122073019..122073034,-#_7e4b829754fd95414e6721c181aeb5bf | p@chr11:122073019..122073034, - |
5.48e-18 | FFCP PHASE2:Hg19::chr4:169022528..169022531,+#_7f9c95a81937b00209a05239d48582a6 | p@chr4:169022528..169022531, + |
5.48e-18 | FFCP PHASE1:Hg19::chr4:169022528..169022531,+#_7f9c95a81937b00209a05239d48582a6 | p@chr4:169022528..169022531, + |
6.27e-18 | FFCP PHASE2:Hg19::chr2:47109897..47109901,+#_58fbc993111851a5a795c36d856ee9a0 | p@chr2:47109897..47109901, + |
6.27e-18 | FFCP PHASE1:Hg19::chr2:47109897..47109901,+#_58fbc993111851a5a795c36d856ee9a0 | p@chr2:47109897..47109901, + |
6.48e-18 | FFCP PHASE1:Hg19::chr6:27198375..27198387,-#_c18359f44e81a18963d30499a91c5f83 | p@chr6:27198375..27198387, - |
6.48e-18 | FFCP PHASE2:Hg19::chr2:85173188..85173189,-#_c18359f44e81a18963d30499a91c5f83 | p@chr2:85173188..85173189, - |
6.48e-18 | FFCP PHASE1:Hg19::chr2:85173188..85173189,-#_c18359f44e81a18963d30499a91c5f83 | p@chr2:85173188..85173189, - |
6.48e-18 | FFCP PHASE2:Hg19::chr6:27198375..27198387,-#_c18359f44e81a18963d30499a91c5f83 | p@chr6:27198375..27198387, - |
7.67e-18 | FFCP PHASE1:Hg19::chr9:33797953..33797969,+#_aeca0d1ec22e1376758e8b44c99fe5f1 | p@chr9:33797953..33797969, + |
7.67e-18 | FFCP PHASE2:Hg19::chr9:33797953..33797969,+#_aeca0d1ec22e1376758e8b44c99fe5f1 | p@chr9:33797953..33797969, + |
1.62e-17 | FFCP PHASE1:Hg19::chr16:89595986..89595990,+#_91c55e04e2050bba1afe50a0be2188ef | p@chr16:89595986..89595990, + |
1.62e-17 | FFCP PHASE2:Hg19::chr16:89595986..89595990,+#_91c55e04e2050bba1afe50a0be2188ef | p@chr16:89595986..89595990, + |
2.99e-16 | FFCP PHASE1:Hg19::chr17:40672344..40672359,+#_ef9378544bd8fe4752376e14065eca74 | p4@ATP6V0A1 |
2.99e-16 | FFCP PHASE2:Hg19::chr17:40672344..40672359,+#_ef9378544bd8fe4752376e14065eca74 | p4@ATP6V0A1 |
4.79e-16 | FFCP PHASE1:Hg19::chr12:127768750..127768765,+#_76e85e406232080e5b747655cb9ad235 | p@chr12:127768750..127768765, + |
4.79e-16 | FFCP PHASE2:Hg19::chr12:127768750..127768765,+#_76e85e406232080e5b747655cb9ad235 | p@chr12:127768750..127768765, + |
1.15e-15 | FFCP PHASE1:Hg19::chr1:155932380..155932384,-#_a6fa455f3f92401fed2cf7d77185e4c8 | p45@ARHGEF2 |
1.15e-15 | FFCP PHASE2:Hg19::chr1:155932380..155932384,-#_a6fa455f3f92401fed2cf7d77185e4c8 | p45@ARHGEF2 |
1.33e-15 | FFCP PHASE2:Hg19::chr15:80841630..80841633,-#_1ed15c10674ca0c1abcccd4eced62ea7 | p@chr15:80841630..80841633, - |
1.33e-15 | FFCP PHASE1:Hg19::chr15:80841630..80841633,-#_1ed15c10674ca0c1abcccd4eced62ea7 | p@chr15:80841630..80841633, - |
1.54e-15 | FFCP PHASE2:Hg19::chr21:26713474..26713508,-#_f093c1071378abb60e7693dc04f84fa2 | p@chr21:26713474..26713508, - |
1.54e-15 | FFCP PHASE2:Hg19::chr9:118431048..118431059,+#_f093c1071378abb60e7693dc04f84fa2 | p@chr9:118431048..118431059, + |
1.54e-15 | FFCP PHASE1:Hg19::chr9:118431048..118431059,+#_f093c1071378abb60e7693dc04f84fa2 | p@chr9:118431048..118431059, + |
1.54e-15 | FFCP PHASE1:Hg19::chr21:26713474..26713508,-#_f093c1071378abb60e7693dc04f84fa2 | p@chr21:26713474..26713508, - |
1.78e-15 | FFCP PHASE1:Hg19::chr12:65959975..65959997,+#_22d00fa7782d5b969db9ddbbed02b03c | p@chr12:65959975..65959997, + |
1.78e-15 | FFCP PHASE2:Hg19::chr12:65959975..65959997,+#_22d00fa7782d5b969db9ddbbed02b03c | +, p@chr12:65959975..65959997 |
2.05e-15 | FFCP PHASE2:Hg19::chr18:52495549..52495589,-#_8bd6190603a03bdb3cce820c578890f0 | p@chr18:52495549..52495589, - |
2.05e-15 | FFCP PHASE1:Hg19::chr18:52495549..52495589,-#_8bd6190603a03bdb3cce820c578890f0 | p@chr18:52495549..52495589, - |
3.37e-15 | FFCP PHASE2:Hg19::chr7:27154961..27154973,+#_b4d2aa2f5260a69ce6dc1895755b1056 | p1@ENST00000517635 |
3.37e-15 | FFCP PHASE1:Hg19::chr7:27154961..27154973,+#_b4d2aa2f5260a69ce6dc1895755b1056 | p1@ENST00000517635 |
3.46e-15 | FFCP PHASE1:Hg19::chr12:63097437..63097440,-#_b00d83f2770e48306440e6a46051eca0 | p@chr12:63097437..63097440, - |
3.46e-15 | FFCP PHASE2:Hg19::chr12:63097437..63097440,-#_b00d83f2770e48306440e6a46051eca0 | p@chr12:63097437..63097440, - |
3.99e-15 | FFCP PHASE2:Hg19::chr12:69633237..69633264,-#_135eeb49cbdef214bf367023a9b285ad | p@chr12:69633237..69633264, - |
3.99e-15 | FFCP PHASE1:Hg19::chr12:69633237..69633264,-#_135eeb49cbdef214bf367023a9b285ad | p@chr12:69633237..69633264, - |
5.52e-15 | FFCP PHASE2:Hg19::chr3:106484411..106484418,+#_b363336e32a483294fffc70a80f4fc67 | +, p@chr3:106484411..106484418 |
5.52e-15 | FFCP PHASE1:Hg19::chr3:106484411..106484418,+#_b363336e32a483294fffc70a80f4fc67 | p@chr3:106484411..106484418, + |
9.65e-15 | FFCP PHASE1:Hg19::chr2:33437467..33437488,+#_1a082ee50e95813aaacfe25ec710cb53 | p@chr2:33437467..33437488, + |
9.65e-15 | FFCP PHASE2:Hg19::chr2:33437467..33437488,+#_1a082ee50e95813aaacfe25ec710cb53 | p@chr2:33437467..33437488, + |
2.21e-14 | FFCP PHASE1:Hg19::chr20:48140671..48140693,-#_5dc2e48e2f4c7dc0d23ed91a5db9e07d | p@chr20:48140671..48140693, - |
2.21e-14 | FFCP PHASE2:Hg19::chr20:48140671..48140693,-#_5dc2e48e2f4c7dc0d23ed91a5db9e07d | p@chr20:48140671..48140693, - |
5.44e-14 | FFCP PHASE1:Hg19::chr11:12182490..12182503,+#_00c3051944ff430ee4f7fa60b6cb74d9 | p8@MICAL2 |
5.44e-14 | FFCP PHASE2:Hg19::chr11:12182490..12182503,+#_00c3051944ff430ee4f7fa60b6cb74d9 | p8@MICAL2 |
7.07e-14 | FFCP PHASE2:Hg19::chr4:74736899..74736917,+#_70f624f2e502b87d6e097ae197e5ba13 | p@chr4:74736899..74736917, + |
7.07e-14 | FFCP PHASE1:Hg19::chr4:74736899..74736917,+#_70f624f2e502b87d6e097ae197e5ba13 | p@chr4:74736899..74736917, + |
8.06e-14 | FFCP PHASE2:Hg19::chr1:32257811..32257816,-#_db8e883d9f3cfb321d6b5be03944526e | p1@BC098449 |
8.06e-14 | FFCP PHASE1:Hg19::chr1:32257811..32257816,-#_db8e883d9f3cfb321d6b5be03944526e | p1@BC098449 |
8.28e-14 | FFCP PHASE2:Hg19::chr11:5385751..5385762,+#_fabc773f432f931b66cafd475616c5e9 | p@chr11:5385751..5385762, + |
8.28e-14 | FFCP PHASE2:Hg19::chr13:52027062..52027077,-#_fabc773f432f931b66cafd475616c5e9 | p13@INTS6 |
8.28e-14 | FFCP PHASE1:Hg19::chr11:5385751..5385762,+#_fabc773f432f931b66cafd475616c5e9 | p@chr11:5385751..5385762, + |
8.28e-14 | FFCP PHASE1:Hg19::chr13:52027062..52027077,-#_fabc773f432f931b66cafd475616c5e9 | p13@INTS6 |
1.07e-13 | FFCP PHASE2:Hg19::chr12:66009286..66009299,+#_ecac2c78bd51891ef9f4caf9395115c7 | p@chr12:66009286..66009299, + |
1.07e-13 | FFCP PHASE2:Hg19::chr4:66960590..66960627,-#_ecac2c78bd51891ef9f4caf9395115c7 | p@chr4:66960590..66960627, - |
1.07e-13 | FFCP PHASE1:Hg19::chr11:1006616..1006623,+#_ecac2c78bd51891ef9f4caf9395115c7 | p6@AP2A2 |
1.07e-13 | FFCP PHASE2:Hg19::chr11:1006616..1006623,+#_ecac2c78bd51891ef9f4caf9395115c7 | p6@AP2A2 |
Property "Property value" (as page type) with input value "UBPROP:0000001 "Artery originating at the junction of the first two aortic arches and supplying the anterior brain. Kimmel et al, 1995.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.