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UBERON:0005744

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Name:cranial conduit
Definition:"Anatomical space that is an opening in a bone, usually for passage of blood vessels or nerves." [TAO:curator, Wikipedia:Foramina_of_the_skull]
Xrefs:
links:

AAO:0010438
FMA:53165
[ Gray193.png Gray193.png]
SCTID:276742007
TAO:0001736

ZFA:0005386
Synonyms: "foramen" BROAD [ZFA:0005386]
"foramen of skull" RELATED [Wikipedia:Foramina_of_the_skull]
Comments:AO notes: in FMA and ZFA this is a conduit space, not a conduit. Note there may be some additional disambiguation required: foramen is used loosely in the sense of any opening (e.g. foramen primum). FMA appears to use cranial conduit (undefined) in the sense of any foramen of the skull (includes mental foramen, which is not in the cranium proper).
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004111(anatomical conduit)
part_of:UBERON:0003129(skull)



Children NA

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005744 (cranial conduit), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_e2a38317b38acd5179c97834d64e7f64p3@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_e2a38317b38acd5179c97834d64e7f64p@chr16:93971325..93971337, -
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_e2a38317b38acd5179c97834d64e7f64p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_e2a38317b38acd5179c97834d64e7f64p1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr10:97109753..97109764,+#_e2a38317b38acd5179c97834d64e7f64p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_e2a38317b38acd5179c97834d64e7f64p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr19:4140290..4140321,+#_e2a38317b38acd5179c97834d64e7f64p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_e2a38317b38acd5179c97834d64e7f64p1@Otogl
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_e2a38317b38acd5179c97834d64e7f64p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_e2a38317b38acd5179c97834d64e7f64p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:29733825..29733837,-#_e2a38317b38acd5179c97834d64e7f64p@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:94627290..94627299,-#_e2a38317b38acd5179c97834d64e7f64p@chr1:94627290..94627299, -
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_e2a38317b38acd5179c97834d64e7f64p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr1:43454162..43454170,-#_e2a38317b38acd5179c97834d64e7f64p@chr1:43454162..43454170, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_e2a38317b38acd5179c97834d64e7f64p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:10536797..10536802,-#_e2a38317b38acd5179c97834d64e7f64p@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_e2a38317b38acd5179c97834d64e7f64p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_e2a38317b38acd5179c97834d64e7f64p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_e2a38317b38acd5179c97834d64e7f64p2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_e2a38317b38acd5179c97834d64e7f64p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_e2a38317b38acd5179c97834d64e7f64p1@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_e2a38317b38acd5179c97834d64e7f64p10@Otof
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_e2a38317b38acd5179c97834d64e7f64p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_e2a38317b38acd5179c97834d64e7f64p1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_e2a38317b38acd5179c97834d64e7f64p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_e2a38317b38acd5179c97834d64e7f64p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr8:13414289..13414295,+#_e2a38317b38acd5179c97834d64e7f64p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_e2a38317b38acd5179c97834d64e7f64p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_e2a38317b38acd5179c97834d64e7f64p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_e2a38317b38acd5179c97834d64e7f64p4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_e2a38317b38acd5179c97834d64e7f64p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr5:21371424..21371435,-#_e2a38317b38acd5179c97834d64e7f64p2@Slc26a5
1.87e-86FFCP PHASE1:Mm9::chr18:66033526..66033539,-#_e2a38317b38acd5179c97834d64e7f64p@chr18:66033526..66033539, -
1.87e-86FFCP PHASE2:Mm9::chr19:22767090..22767099,+#_e2a38317b38acd5179c97834d64e7f64p18@Trpm3
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_e2a38317b38acd5179c97834d64e7f64p@chr4:130461150..130461185, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_e2a38317b38acd5179c97834d64e7f64p3@Strc
1.87e-86FFCP PHASE2:Mm9::chr9:42207998..42208009,-#_e2a38317b38acd5179c97834d64e7f64p6@Tecta
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_e2a38317b38acd5179c97834d64e7f64p15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr1:172843847..172843880,-#_e2a38317b38acd5179c97834d64e7f64p@chr1:172843847..172843880, -
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_e2a38317b38acd5179c97834d64e7f64p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_e2a38317b38acd5179c97834d64e7f64p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr14:102297728..102297742,+#_e2a38317b38acd5179c97834d64e7f64p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_e2a38317b38acd5179c97834d64e7f64p2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_e2a38317b38acd5179c97834d64e7f64p@chr6:29428397..29428407, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_e2a38317b38acd5179c97834d64e7f64p@chr12:77084875..77084885, +
1.87e-86FFCP PHASE1:Mm9::chr1:60561636..60561645,-#_e2a38317b38acd5179c97834d64e7f64p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_e2a38317b38acd5179c97834d64e7f64p5@Otogl
1.87e-86FFCP PHASE2:Mm9::chr6:86746562..86746579,-#_e2a38317b38acd5179c97834d64e7f64p@chr6:86746562..86746579, -
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_e2a38317b38acd5179c97834d64e7f64+, p@chr3:81012915..81012923
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_e2a38317b38acd5179c97834d64e7f64p11@Tecta
1.87e-86FFCP PHASE2:Mm9::chr1:182528388..182528403,+#_e2a38317b38acd5179c97834d64e7f64p@chr1:182528388..182528403, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206677..121206683,-#_e2a38317b38acd5179c97834d64e7f64p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:89702580..89702593,-#_e2a38317b38acd5179c97834d64e7f64p@chr11:89702580..89702593, -
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_e2a38317b38acd5179c97834d64e7f64p1@Tmc1
1.87e-86FFCP PHASE2:Mm9::chr2:67011921..67011934,+#_e2a38317b38acd5179c97834d64e7f64p2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr5:68423014..68423037,+#_e2a38317b38acd5179c97834d64e7f64p1@Grxcr1
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_e2a38317b38acd5179c97834d64e7f64p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr1:172843796..172843799,-#_e2a38317b38acd5179c97834d64e7f64p@chr1:172843796..172843799, -
1.87e-86FFCP PHASE2:Mm9::chr9:41495920..41495928,-#_e2a38317b38acd5179c97834d64e7f64p@chr9:41495920..41495928, -
1.87e-86FFCP PHASE2:Mm9::chr19:4140290..4140321,+#_e2a38317b38acd5179c97834d64e7f64p2@Gpr152
1.87e-86FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_e2a38317b38acd5179c97834d64e7f64p1@Tmprss7
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_e2a38317b38acd5179c97834d64e7f64p@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_e2a38317b38acd5179c97834d64e7f64p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_e2a38317b38acd5179c97834d64e7f64p1@Tectb
1.87e-86FFCP PHASE1:Mm9::chr6:30619443..30619450,-#_e2a38317b38acd5179c97834d64e7f64p13@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_e2a38317b38acd5179c97834d64e7f64p2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_e2a38317b38acd5179c97834d64e7f64p7@Pkn3
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_e2a38317b38acd5179c97834d64e7f64p3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_e2a38317b38acd5179c97834d64e7f64p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr12:13508015..13508019,+#_e2a38317b38acd5179c97834d64e7f64p@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr14:31283072..31283081,-#_e2a38317b38acd5179c97834d64e7f64p@chr14:31283072..31283081, -
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_e2a38317b38acd5179c97834d64e7f64p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_e2a38317b38acd5179c97834d64e7f64p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_e2a38317b38acd5179c97834d64e7f64p4@Kncn
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_e2a38317b38acd5179c97834d64e7f64p@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr3:35012425..35012439,+#_e2a38317b38acd5179c97834d64e7f64p@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_e2a38317b38acd5179c97834d64e7f64p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_e2a38317b38acd5179c97834d64e7f64p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_e2a38317b38acd5179c97834d64e7f64p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_e2a38317b38acd5179c97834d64e7f64p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_e2a38317b38acd5179c97834d64e7f64p2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_e2a38317b38acd5179c97834d64e7f64p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_e2a38317b38acd5179c97834d64e7f64p@chr11:114603036..114603048, +
1.87e-86FFCP PHASE1:Mm9::chr12:13508046..13508055,+#_e2a38317b38acd5179c97834d64e7f64p@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_e2a38317b38acd5179c97834d64e7f64p3@Epyc
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_e2a38317b38acd5179c97834d64e7f64p2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_e2a38317b38acd5179c97834d64e7f64p4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_e2a38317b38acd5179c97834d64e7f64p@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_e2a38317b38acd5179c97834d64e7f64p7@A730017C20Rik
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_e2a38317b38acd5179c97834d64e7f64p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_e2a38317b38acd5179c97834d64e7f64p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_e2a38317b38acd5179c97834d64e7f64p@chr17:13983160..13983167, +
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_e2a38317b38acd5179c97834d64e7f64p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_e2a38317b38acd5179c97834d64e7f64p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_e2a38317b38acd5179c97834d64e7f64p@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257518..78257522,+#_e2a38317b38acd5179c97834d64e7f64p@chr13:78257518..78257522, +
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_e2a38317b38acd5179c97834d64e7f64p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr10:80806047..80806059,-#_e2a38317b38acd5179c97834d64e7f64p4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr16:93971357..93971363,-#_e2a38317b38acd5179c97834d64e7f64p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_e2a38317b38acd5179c97834d64e7f64p2@Tmprss3