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UBERON:0006240

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Name:future forebrain
Namespace:FANTOM
Xrefs:
links:

EFO:0003423
EHDAA2:0000661
EHDAA:2643
EMAPA:16640
TAO:0000062

ZFA:0000062
Synonyms: "presumptive forebrain" EXACT [ZFA:0000062]
"prosencephalon" RELATED []
Comments:TODO. Add relationships to neural plate (both ZFA and EMAPA time this with the neural plate)
Subset: emapa_ehdaa2
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0006598(presumptive structure)
part_of:UBERON:0006238(future brain)



Children

part of:UBERON:0006222 (future diencephalon),UBERON:0014371 (future telencephalon)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006240 (future forebrain), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
6.11e-141FFCP PHASE1:Hg19::chr5:89977201..89977236,+#_33578e20b178c934ad5b7a60cc5954aep@chr5:89977201..89977236, +
6.11e-141FFCP PHASE2:Hg19::chr5:89977201..89977236,+#_33578e20b178c934ad5b7a60cc5954aep@chr5:89977201..89977236, +
2.38e-133FFCP PHASE2:Hg19::chr18:55019840..55019850,+#_4fa925e21646a4c5721a688e41257817p5@ST8SIA3
2.38e-133FFCP PHASE1:Hg19::chr18:55019840..55019850,+#_4fa925e21646a4c5721a688e41257817p5@ST8SIA3
6.8e-130FFCP PHASE2:Hg19::chr6:12717031..12717057,+#_97e6a8013cee26debaf9be09e35c5bf2p5@PHACTR1
6.8e-130FFCP PHASE1:Hg19::chr6:12717031..12717057,+#_97e6a8013cee26debaf9be09e35c5bf2p5@PHACTR1
2.27e-128FFCP PHASE1:Hg19::chr6:12716992..12717005,+#_d878b29670cb65a087dd6d9f34ac97adp3@PHACTR1
2.27e-128FFCP PHASE2:Hg19::chr6:12716992..12717005,+#_d878b29670cb65a087dd6d9f34ac97adp3@PHACTR1
6.39e-128FFCP PHASE1:Hg19::chr10:104178839..104178855,-#_48f4c74011ab65538e2cf08ed913b7b8p6@PSD
6.39e-128FFCP PHASE2:Hg19::chr10:104178839..104178855,-#_48f4c74011ab65538e2cf08ed913b7b8p6@PSD
7.77e-125FFCP PHASE2:Hg19::chr20:61806320..61806344,+#_b33e6758f1f8a3e591dfe31b77e5b45dp@chr20:61806320..61806344, +
7.77e-125FFCP PHASE1:Hg19::chr20:61806320..61806344,+#_b33e6758f1f8a3e591dfe31b77e5b45dp@chr20:61806320..61806344, +
3.82e-123FFCP PHASE1:Hg19::chr19:35633957..35633969,+#_0608786ad8ad0586e6da7b7eee48f883p2@FXYD7
3.82e-123FFCP PHASE2:Hg19::chr19:35633957..35633969,+#_0608786ad8ad0586e6da7b7eee48f883p2@FXYD7
1.09e-121FFCP PHASE2:Hg19::chr6:108487289..108487302,+#_fda764ecbe51012106508becf2b28bc5p1@NR2E1
1.09e-121FFCP PHASE1:Hg19::chr6:108487289..108487302,+#_fda764ecbe51012106508becf2b28bc5p1@NR2E1
2.87e-118FFCP PHASE1:Hg19::chr11:133402410..133402434,-#_c6b6f80d5d3627a690dfff7d38921c8ep5@OPCML
2.87e-118FFCP PHASE2:Hg19::chr11:133402410..133402434,-#_c6b6f80d5d3627a690dfff7d38921c8ep5@OPCML
7.25e-118FFCP PHASE1:Hg19::chr7:154002369..154002398,+#_df75ecaf4f25d80e22b9f207440e80dbp4@DPP6
7.25e-118FFCP PHASE2:Hg19::chr7:154002369..154002398,+#_df75ecaf4f25d80e22b9f207440e80dbp4@DPP6
8.87e-118FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_e98bc3e85dbcd085c768eee6628433bap9@GPM6B
8.87e-118FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_e98bc3e85dbcd085c768eee6628433bap9@GPM6B
1.66e-117FFCP PHASE2:Hg19::chr4:6514469..6514483,-#_c4ba6e7dd744beb133a660b1ccc5152fp@chr4:6514469..6514483, -
1.66e-117FFCP PHASE1:Hg19::chr4:6514469..6514483,-#_c4ba6e7dd744beb133a660b1ccc5152fp@chr4:6514469..6514483, -
2.75e-117FFCP PHASE2:Hg19::chr12:14133429..14133438,-#_3004d62c7d2697eefb8f2078c7c40ebep3@GRIN2B
2.75e-117FFCP PHASE1:Hg19::chr12:14133429..14133438,-#_3004d62c7d2697eefb8f2078c7c40ebep3@GRIN2B
2.82e-116FFCP PHASE2:Hg19::chr6:12717819..12717851,+#_2e130dbdc61dad6b0605b6e8062b4846p4@PHACTR1
2.82e-116FFCP PHASE1:Hg19::chr6:12717819..12717851,+#_2e130dbdc61dad6b0605b6e8062b4846p4@PHACTR1
2.93e-116FFCP PHASE2:Hg19::chr8:104831416..104831427,+#_3e251ccd252a703672e86df6b3ba61dbp8@RIMS2
2.93e-116FFCP PHASE1:Hg19::chr8:104831416..104831427,+#_3e251ccd252a703672e86df6b3ba61dbp8@RIMS2
5.58e-116FFCP PHASE1:Hg19::chr1:70033108..70033121,+#_619fc158d7c0f1a486143232e39dd65ap8@LRRC7
5.58e-116FFCP PHASE2:Hg19::chr1:70033108..70033121,+#_619fc158d7c0f1a486143232e39dd65ap8@LRRC7
6.52e-116FFCP PHASE2:Hg19::chr1:35391249..35391269,-#_f1a6b9cc6d2ecfc44b2537225b9963b4p4@DLGAP3
6.52e-116FFCP PHASE1:Hg19::chr1:35391249..35391269,-#_f1a6b9cc6d2ecfc44b2537225b9963b4p4@DLGAP3
6.61e-116FFCP PHASE1:Hg19::chr6:12717801..12717817,+#_17c043d81bec6ef539323f8a0a680340p8@PHACTR1
6.61e-116FFCP PHASE2:Hg19::chr6:12717801..12717817,+#_17c043d81bec6ef539323f8a0a680340p8@PHACTR1
5.28e-115FFCP PHASE2:Hg19::chr7:111424462..111424496,-#_a2ce1bb1c25284ed6bfc3c53ea3f849cp3@DOCK4
5.28e-115FFCP PHASE1:Hg19::chr7:111424462..111424496,-#_a2ce1bb1c25284ed6bfc3c53ea3f849cp3@DOCK4
5.97e-115FFCP PHASE1:Hg19::chr5:89936560..89936586,+#_f025312d47ea713bc69334c12ea13b10p3@GPR98
5.97e-115FFCP PHASE2:Hg19::chr5:89936560..89936586,+#_f025312d47ea713bc69334c12ea13b10p3@GPR98
1.02e-114FFCP PHASE1:Hg19::chr1:35391417..35391476,-#_3b891db668fa6e5c15ccce9320fc9b8fp2@DLGAP3
1.02e-114FFCP PHASE2:Hg19::chr1:35391417..35391476,-#_3b891db668fa6e5c15ccce9320fc9b8fp2@DLGAP3
1.06e-114FFCP PHASE2:Hg19::chr16:14280513..14280524,+#_ad9ddfd92e772cb0d9e38b08e687c4cap5@MKL2
1.06e-114FFCP PHASE1:Hg19::chr16:14280513..14280524,+#_ad9ddfd92e772cb0d9e38b08e687c4cap5@MKL2
8.42e-114FFCP PHASE2:Hg19::chr6:97753454..97753523,+#_2ef1393570f2870e0eadd45f5985297dp1@uc003ppd.1
8.42e-114FFCP PHASE1:Hg19::chr6:97753454..97753523,+#_2ef1393570f2870e0eadd45f5985297dp1@uc003ppd.1
3.53e-113FFCP PHASE1:Hg19::chr1:70035018..70035044,+#_c7be013a5a155eacf27ee0753ca49411p@chr1:70035018..70035044, +
3.53e-113FFCP PHASE2:Hg19::chr1:70035018..70035044,+#_c7be013a5a155eacf27ee0753ca49411p@chr1:70035018..70035044, +
5.22e-113FFCP PHASE1:Hg19::chr4:46392101..46392112,-#_22a21fe10ca0c949f1738e8c156ea8cbp6@GABRA2
5.22e-113FFCP PHASE2:Hg19::chr4:46392101..46392112,-#_22a21fe10ca0c949f1738e8c156ea8cbp6@GABRA2
5.23e-113FFCP PHASE1:Hg19::chr12:120242250..120242273,-#_193b7f365fc21939b5dbaee2d729abc5p6@CIT
5.23e-113FFCP PHASE2:Hg19::chr12:120242250..120242273,-#_193b7f365fc21939b5dbaee2d729abc5p6@CIT
1.08e-112FFCP PHASE1:Hg19::chr19:49016319..49016405,-#_e29d7a53bad8f5dd0cb127ba5695ab56p2@LMTK3
1.08e-112FFCP PHASE2:Hg19::chr19:49016319..49016405,-#_e29d7a53bad8f5dd0cb127ba5695ab56p2@LMTK3
1.26e-112FFCP PHASE1:Hg19::chrX:13835472..13835483,-#_74865b7dc3038fe47a3f8c4eecbc9463p10@GPM6B
1.26e-112FFCP PHASE2:Hg19::chrX:13835472..13835483,-#_74865b7dc3038fe47a3f8c4eecbc9463p10@GPM6B
1.39e-112FFCP PHASE2:Hg19::chr5:80255907..80255942,+#_41a5f58d4be4cecc23a9542c390aeb8cp@chr5:80255907..80255942, +
1.39e-112FFCP PHASE1:Hg19::chr5:80255907..80255942,+#_41a5f58d4be4cecc23a9542c390aeb8cp@chr5:80255907..80255942, +
1.42e-112FFCP PHASE2:Hg19::chr17:61194578..61194599,+#_bf527486f1e48d80874a85da1c9408d8p@chr17:61194578..61194599, +
1.42e-112FFCP PHASE1:Hg19::chr17:61194578..61194599,+#_bf527486f1e48d80874a85da1c9408d8p@chr17:61194578..61194599, +
1.66e-112FFCP PHASE1:Hg19::chr5:89977181..89977199,+#_5efa480c101467c5b027e8577c81e2ffp@chr5:89977181..89977199, +
1.66e-112FFCP PHASE2:Hg19::chr5:89977181..89977199,+#_5efa480c101467c5b027e8577c81e2ffp@chr5:89977181..89977199, +
6.89e-112FFCP PHASE1:Hg19::chr7:94843638..94843650,-#_8baabdd3026c65e13544479cd91426d1p1@ENST00000417881
6.89e-112FFCP PHASE2:Hg19::chr7:94843638..94843650,-#_8baabdd3026c65e13544479cd91426d1p1@ENST00000417881
7.85e-112FFCP PHASE2:Hg19::chr7:154002341..154002355,+#_72224f42b2f2cb187e0c54f089f99388p6@DPP6
7.85e-112FFCP PHASE1:Hg19::chr7:154002341..154002355,+#_72224f42b2f2cb187e0c54f089f99388p6@DPP6
1.02e-111FFCP PHASE1:Hg19::chr5:27038708..27038730,-#_39278ced699f013f61a0c81eefe98c27p2@CDH9
1.02e-111FFCP PHASE2:Hg19::chr5:27038708..27038730,-#_39278ced699f013f61a0c81eefe98c27p2@CDH9
1.42e-111FFCP PHASE2:Hg19::chr2:3134361..3134374,-#_155aa68210ac9d1cd33f3ce257cc2e1ep@chr2:3134361..3134374, -
1.42e-111FFCP PHASE1:Hg19::chr2:3134361..3134374,-#_155aa68210ac9d1cd33f3ce257cc2e1ep@chr2:3134361..3134374, -
1.94e-111FFCP PHASE1:Hg19::chr6:155538132..155538147,+#_3bdab584955aedf972596dc1a14f47a7p3@TIAM2
1.94e-111FFCP PHASE2:Hg19::chr6:155538132..155538147,+#_3bdab584955aedf972596dc1a14f47a7p3@TIAM2
3.18e-111FFCP PHASE1:Hg19::chr3:124103620..124103704,+#_17c50a77a73948c6e85f56edbf3ec4dap1@KALRN
3.18e-111FFCP PHASE2:Hg19::chr3:124103620..124103704,+#_17c50a77a73948c6e85f56edbf3ec4dap1@KALRN
4.18e-111FFCP PHASE1:Hg19::chr1:177134053..177134069,-#_d350f56be320258adeae1e45c85ec698p4@ASTN1
4.18e-111FFCP PHASE2:Hg19::chr1:177134053..177134069,-#_d350f56be320258adeae1e45c85ec698p4@ASTN1
5.69e-111FFCP PHASE2:Hg19::chr11:132982177..132982181,-#_9510378901ef572b191ba73434b542dcp@chr11:132982177..132982181, -
5.69e-111FFCP PHASE1:Hg19::chr11:132982177..132982181,-#_9510378901ef572b191ba73434b542dcp@chr11:132982177..132982181, -
7.54e-111FFCP PHASE2:Hg19::chr8:63161215..63161235,+#_d9314200a207caa7920718b3882348c5p5@NKAIN3
7.54e-111FFCP PHASE1:Hg19::chr8:63161215..63161235,+#_d9314200a207caa7920718b3882348c5p5@NKAIN3
1.27e-110FFCP PHASE2:Hg19::chr12:99548462..99548482,-#_d94e32705250190511b0402c907fabf5p9@ANKS1B
1.27e-110FFCP PHASE1:Hg19::chr12:99548462..99548482,-#_d94e32705250190511b0402c907fabf5p9@ANKS1B
1.38e-110FFCP PHASE1:Hg19::chr15:80735246..80735321,+#_4e35fb7f60281d8af90f2408995cd398p3@ARNT2
1.38e-110FFCP PHASE2:Hg19::chr15:80735246..80735321,+#_4e35fb7f60281d8af90f2408995cd398p3@ARNT2
2.12e-110FFCP PHASE1:Hg19::chr20:1791316..1791339,-#_b61b2b9c95d277e7c642640c56803e02p@chr20:1791316..1791339, -
2.12e-110FFCP PHASE2:Hg19::chr20:1791316..1791339,-#_b61b2b9c95d277e7c642640c56803e02-, p@chr20:1791316..1791339
2.27e-110FFCP PHASE2:Hg19::chr9:112629781..112629806,+#_8569eda7a83d220bbfb4a18778c56c6ep14@PALM2-AKAP2
2.27e-110FFCP PHASE1:Hg19::chr9:112629781..112629806,+#_8569eda7a83d220bbfb4a18778c56c6ep14@PALM2-AKAP2
3.45e-110FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_f84c31ec7bab849930c049e3255ed4fdp6@GPM6B
3.45e-110FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_f84c31ec7bab849930c049e3255ed4fdp6@GPM6B
4.23e-110FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_b4bd55a371f8ce97eda5233c1609e070p1@ENST00000412957
4.23e-110FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_b4bd55a371f8ce97eda5233c1609e070p1@ENST00000412957
5.12e-110FFCP PHASE1:Hg19::chr12:99548342..99548354,-#_4efa6e6923a4c43d45b3099ebd4ddc88p7@ANKS1B
5.12e-110FFCP PHASE2:Hg19::chr12:99548342..99548354,-#_4efa6e6923a4c43d45b3099ebd4ddc88p7@ANKS1B
7.19e-110FFCP PHASE2:Hg19::chr20:1791288..1791304,-#_7cbeb7f812d78eb443b3f54397276732p@chr20:1791288..1791304, -
7.19e-110FFCP PHASE1:Hg19::chr20:1791288..1791304,-#_7cbeb7f812d78eb443b3f54397276732p@chr20:1791288..1791304, -
9.49e-110FFCP PHASE1:Hg19::chr21:43917145..43917190,-#_601787aa9f9a480d5d60cd462b79f0c5p@chr21:43917145..43917190, -
9.49e-110FFCP PHASE2:Hg19::chr21:43917145..43917190,-#_601787aa9f9a480d5d60cd462b79f0c5p@chr21:43917145..43917190, -
1.01e-109FFCP PHASE1:Hg19::chr6:155538093..155538109,+#_50022d3d9ae40ed6ccccf2d358a1b27ap2@TIAM2
1.01e-109FFCP PHASE2:Hg19::chr6:155538093..155538109,+#_50022d3d9ae40ed6ccccf2d358a1b27ap2@TIAM2