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UBERON:0006904

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Name:head mesenchyme from mesoderm
Namespace:FANTOM
Xrefs:
links:

AAO:0011051
EFO:0003337
EFO:0003603
EHDAA2:0001118
EHDAA:655
EMAPA:16099
EMAPA:16270
TAO:0000998
VHOG:0000185
XAO:0000053

ZFA:0000998
Synonyms: "cranial mesoderm" RELATED [UBERON:0005280]
"head mesenchyme derived from mesoderm" EXACT []
"head mesenchyme from head mesoderm" EXACT [EHDAA2:0001118]
"head mesenchyme from mesoderm" EXACT []
"head mesoderm" RELATED [AAO:0011051, UBERON:0005280]
"mesenchyme derived from head mesoderm" EXACT [EHDAA:1057]
"mesenchyme from head mesoderm" EXACT []
Comments:Editor note: merged in 'head mesoderm' from XAO/AAO and EFO here. Partially implements UBERONREF:0000002 NC meeting scheme
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0005253(head mesenchyme)
develops_from:UBERON:0000926(mesoderm),UBERON:0003063(prechordal plate)



Children

is a:UBERON:0005705 (primary palate mesenchyme),UBERON:0006230 (extrinsic ocular pre-muscle mass),UBERON:0009617 (head paraxial mesoderm)
develops from:UBERON:0002376 (cranial muscle)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006904 (head mesenchyme from mesoderm), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


No analysis results