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UBERON:0007284

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Name:presumptive neural plate
Namespace:FANTOM
Xrefs:
links:

EFO:0003424
TAO:0000063

ZFA:0000063

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0006598(presumptive structure),UBERON:0016879(future central nervous system)
develops_from:UBERON:0002346(neurectoderm)
part_of:UBERON:0004734(gastrula)



Children

develops from:UBERON:0003075 (neural plate)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0007284 (presumptive neural plate), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
9.11e-109FFCP PHASE1:Hg19::chr5:11588907..11588967,-#_4d17243ea0b2fc4f176613faafd17d5cp3@CTNND2
9.11e-109FFCP PHASE2:Hg19::chr5:11588907..11588967,-#_4d17243ea0b2fc4f176613faafd17d5cp3@CTNND2
3.26e-108FFCP PHASE1:Hg19::chr11:31839488..31839515,-#_de009bf76ef2ab8602f020a3fad68bd7p3@PAX6
3.26e-108FFCP PHASE2:Hg19::chr11:31839488..31839515,-#_de009bf76ef2ab8602f020a3fad68bd7p3@PAX6
7.37e-104FFCP PHASE2:Hg19::chr17:54230819..54230848,+#_e35e1385b2329f9bf45cad69177eaa66p1@ANKFN1
7.37e-104FFCP PHASE1:Hg19::chr17:54230819..54230848,+#_e35e1385b2329f9bf45cad69177eaa66p1@ANKFN1
2.38e-100FFCP PHASE1:Hg19::chr2:74612644..74612670,+#_0888b51e708e0d6c3f922182454987edp1@ENST00000412957
2.38e-100FFCP PHASE2:Hg19::chr2:74612644..74612670,+#_0888b51e708e0d6c3f922182454987edp1@ENST00000412957
3.23e-100FFCP PHASE1:Hg19::chr5:87439352..87439386,-#_50c20b0e431c3da078c411ce07de864dp@chr5:87439352..87439386, -
3.23e-100FFCP PHASE2:Hg19::chr5:87439352..87439386,-#_50c20b0e431c3da078c411ce07de864dp@chr5:87439352..87439386, -
1.2e-98FFCP PHASE1:Hg19::chr12:106976678..106976708,+#_05ce752154555b631fc208733b373e33p2@RFX4
1.2e-98FFCP PHASE2:Hg19::chr12:106976678..106976708,+#_05ce752154555b631fc208733b373e33p2@RFX4
1.54e-98FFCP PHASE2:Hg19::chr5:11384884..11384916,-#_e27f1c2e4cd7dbddd6b670832e9c06b4p8@CTNND2
1.54e-98FFCP PHASE1:Hg19::chr5:11384884..11384916,-#_e27f1c2e4cd7dbddd6b670832e9c06b4p8@CTNND2
2.06e-98FFCP PHASE1:Hg19::chr2:50201220..50201261,-#_87be61e04cc2eca508496fb5f5438406p3@NRXN1
2.06e-98FFCP PHASE2:Hg19::chr2:50201220..50201261,-#_87be61e04cc2eca508496fb5f5438406p3@NRXN1
4.02e-98FFCP PHASE1:Hg19::chr8:18541544..18541592,-#_f019ffe9a60308c397a2d5e01563336ep2@PSD3
4.02e-98FFCP PHASE2:Hg19::chr8:18541544..18541592,-#_f019ffe9a60308c397a2d5e01563336ep2@PSD3
4.6e-98FFCP PHASE2:Hg19::chr18:32398296..32398318,+#_07ec970fb75d8b419f324bcc1a53ad08p7@DTNA
4.6e-98FFCP PHASE1:Hg19::chr18:32398296..32398318,+#_07ec970fb75d8b419f324bcc1a53ad08p7@DTNA
9.29e-98FFCP PHASE1:Hg19::chr11:62475005..62475041,-#_1afb3100e228a3461579e426ddc504a1p6@BSCL2
9.29e-98FFCP PHASE2:Hg19::chr11:62475005..62475041,-#_1afb3100e228a3461579e426ddc504a1p6@BSCL2
2.26e-97FFCP PHASE1:Hg19::chr5:146314142..146314146,-#_dce1c27acd6f57a0ae390335631926e0-, p@chr5:146314142..146314146
2.26e-97FFCP PHASE2:Hg19::chr5:146314142..146314146,-#_dce1c27acd6f57a0ae390335631926e0p@chr5:146314142..146314146, -
1.06e-96FFCP PHASE2:Hg19::chr4:165305086..165305179,-#_3f984a0645bd953912690424c7517a52p2@MARCH1
1.06e-96FFCP PHASE1:Hg19::chr4:165305086..165305179,-#_3f984a0645bd953912690424c7517a52p2@MARCH1
1.15e-96FFCP PHASE1:Hg19::chr17:36760961..36760976,-#_f5be82a54923bf759724c549be08d6d3p2@SRCIN1
1.15e-96FFCP PHASE2:Hg19::chr17:36760961..36760976,-#_f5be82a54923bf759724c549be08d6d3p2@SRCIN1
1.21e-96FFCP PHASE2:Hg19::chr4:46126009..46126045,-#_def77f0111a0d5ca0f99e82cd7fe6576p1@GABRG1
1.21e-96FFCP PHASE1:Hg19::chr4:46126009..46126045,-#_def77f0111a0d5ca0f99e82cd7fe6576p1@GABRG1
2.85e-96FFCP PHASE2:Hg19::chr19:30016395..30016433,+#_ccfcfc3eb5bca6a5e47608109103d3f6+, p@chr19:30016395..30016433
2.85e-96FFCP PHASE1:Hg19::chr19:30016395..30016433,+#_ccfcfc3eb5bca6a5e47608109103d3f6p@chr19:30016395..30016433, +
4.51e-96FFCP PHASE1:Hg19::chr5:11386115..11386130,-#_0a10a81dd40312fb5c4c0ec867985decp2@CTNND2
4.51e-96FFCP PHASE2:Hg19::chr5:11386115..11386130,-#_0a10a81dd40312fb5c4c0ec867985decp2@CTNND2
7.48e-96FFCP PHASE1:Hg19::chr12:106976656..106976672,+#_aa9ccf9c4681bc9f6345d456c140dd3cp4@RFX4
7.48e-96FFCP PHASE2:Hg19::chr12:106976656..106976672,+#_aa9ccf9c4681bc9f6345d456c140dd3cp4@RFX4
7.68e-96FFCP PHASE2:Hg19::chr1:84630574..84630602,+#_418f791db29526beddb8e27375d66cc6p9@PRKACB
7.68e-96FFCP PHASE1:Hg19::chr1:84630574..84630602,+#_418f791db29526beddb8e27375d66cc6p9@PRKACB
8.2e-96FFCP PHASE1:Hg19::chr15:46702499..46702523,+#_a5d9ac81aeba2b2e1b95197e68c12871p@chr15:46702499..46702523, +
8.2e-96FFCP PHASE2:Hg19::chr15:46702499..46702523,+#_a5d9ac81aeba2b2e1b95197e68c12871p@chr15:46702499..46702523, +
8.26e-96FFCP PHASE1:Hg19::chr5:87980761..87980821,-#_e3b9b0b6cb841ea25f117d0b402258fdp4@LINC00461
8.26e-96FFCP PHASE2:Hg19::chr5:87980761..87980821,-#_e3b9b0b6cb841ea25f117d0b402258fdp4@LINC00461
9.79e-96FFCP PHASE1:Hg19::chrX:13835398..13835429,-#_e20af1c9fa49ef9ddb55453d6e6a0af2p6@GPM6B
9.79e-96FFCP PHASE2:Hg19::chrX:13835398..13835429,-#_e20af1c9fa49ef9ddb55453d6e6a0af2p6@GPM6B
1.45e-95FFCP PHASE2:Hg19::chr1:84630610..84630621,+#_1ad77db0fadfa339202c0f1aae4cdb87p17@PRKACB
1.45e-95FFCP PHASE1:Hg19::chr1:84630610..84630621,+#_1ad77db0fadfa339202c0f1aae4cdb87p17@PRKACB
1.98e-95FFCP PHASE1:Hg19::chr16:4850844..4850888,-#_298cb056a2210b10712df9a895a4464bp@chr16:4850844..4850888, -
1.98e-95FFCP PHASE2:Hg19::chr16:4850844..4850888,-#_298cb056a2210b10712df9a895a4464bp@chr16:4850844..4850888, -
2.2e-95FFCP PHASE2:Hg19::chr6:136848260..136848296,-#_ede8eff65d0cf0c5b5164bc4e165d6b6p4@MAP7
2.2e-95FFCP PHASE1:Hg19::chr6:136848260..136848296,-#_ede8eff65d0cf0c5b5164bc4e165d6b6p4@MAP7
3.63e-95FFCP PHASE1:Hg19::chr9:87283501..87283520,+#_45f396d4fdae32d412ea82a634ecb7a0p17@NTRK2
3.63e-95FFCP PHASE2:Hg19::chr9:87283501..87283520,+#_45f396d4fdae32d412ea82a634ecb7a0p17@NTRK2
3.98e-95FFCP PHASE2:Hg19::chr1:2005182..2005194,+#_54acd94e556c3a54fd66e6b9846f263ap8@PRKCZ
3.98e-95FFCP PHASE1:Hg19::chr1:2005182..2005194,+#_54acd94e556c3a54fd66e6b9846f263ap8@PRKCZ
4.64e-95FFCP PHASE1:Hg19::chr12:106976774..106976788,+#_f229911e437b308a97c44ebf4f2c5f9fp1@RFX4
4.64e-95FFCP PHASE2:Hg19::chr12:106976774..106976788,+#_f229911e437b308a97c44ebf4f2c5f9fp1@RFX4
6.45e-95FFCP PHASE1:Hg19::chr6:80131670..80131724,+#_46ec0e00ce4eb719bfbb9fc9104f6c7ap@chr6:80131670..80131724, +
6.45e-95FFCP PHASE2:Hg19::chr6:80131670..80131724,+#_46ec0e00ce4eb719bfbb9fc9104f6c7a+, p@chr6:80131670..80131724
1.07e-94FFCP PHASE2:Hg19::chr5:160279207..160279247,-#_c8b8796f1c791ae5f5d094486bba10eap1@ATP10B
1.07e-94FFCP PHASE1:Hg19::chr5:160279207..160279247,-#_c8b8796f1c791ae5f5d094486bba10eap1@ATP10B
1.15e-94FFCP PHASE2:Hg19::chr16:76311254..76311274,+#_d29838ca565c1138b6e330681f4119b0p2@CNTNAP4
1.15e-94FFCP PHASE1:Hg19::chr16:76311254..76311274,+#_d29838ca565c1138b6e330681f4119b0p2@CNTNAP4
1.24e-94FFCP PHASE1:Hg19::chr4:46126063..46126087,-#_83dace7cb7d35c1e84dde4ecffddee3ap2@GABRG1
1.24e-94FFCP PHASE2:Hg19::chr4:46126063..46126087,-#_83dace7cb7d35c1e84dde4ecffddee3ap2@GABRG1
3.41e-94FFCP PHASE2:Hg19::chr7:47420733..47420758,-#_fd63debe0f17b4293f84d5b6d3aa4828-, p@chr7:47420733..47420758
3.41e-94FFCP PHASE1:Hg19::chr7:47420733..47420758,-#_fd63debe0f17b4293f84d5b6d3aa4828-, p@chr7:47420733..47420758
3.86e-94FFCP PHASE1:Hg19::chrX:13835312..13835321,-#_ea406170a582ac6cac192fd10e2cc747p9@GPM6B
3.86e-94FFCP PHASE2:Hg19::chrX:13835312..13835321,-#_ea406170a582ac6cac192fd10e2cc747p9@GPM6B
4.07e-94FFCP PHASE1:Hg19::chr2:74612614..74612643,+#_549a406fe0e9ce15f2ed5ab979218456p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
4.07e-94FFCP PHASE1:Hg19::chr5:112074041..112074101,+#_549a406fe0e9ce15f2ed5ab979218456p4@APC
4.07e-94FFCP PHASE2:Hg19::chr2:74612614..74612643,+#_549a406fe0e9ce15f2ed5ab979218456p1@ENST00000418990, p1@ENST00000426715, p1@ENST00000427343
4.07e-94FFCP PHASE2:Hg19::chr5:112074041..112074101,+#_549a406fe0e9ce15f2ed5ab979218456p4@APC
1.32e-93FFCP PHASE1:Hg19::chr18:32398400..32398416,+#_9b49e22320f8e1a0d8b2c6638d6d2c8bp10@DTNA
1.32e-93FFCP PHASE2:Hg19::chr18:32398400..32398416,+#_9b49e22320f8e1a0d8b2c6638d6d2c8bp10@DTNA
1.41e-93FFCP PHASE2:Hg19::chr17:68101117..68101162,+#_8a6360b1a9a59cf73f1f74cbaa9f0235p2@KCNJ16
1.41e-93FFCP PHASE1:Hg19::chr17:68101117..68101162,+#_8a6360b1a9a59cf73f1f74cbaa9f0235p2@KCNJ16
1.62e-93FFCP PHASE1:Hg19::chr18:32398372..32398394,+#_ebac709d75e934fd1b2cef5a31860b27p5@DTNA
1.62e-93FFCP PHASE1:Hg19::chr17:42989121..42989166,-#_ebac709d75e934fd1b2cef5a31860b27p7@GFAP
1.62e-93FFCP PHASE2:Hg19::chr17:42989121..42989166,-#_ebac709d75e934fd1b2cef5a31860b27p7@GFAP
1.62e-93FFCP PHASE2:Hg19::chr18:32398372..32398394,+#_ebac709d75e934fd1b2cef5a31860b27p5@DTNA
3.0e-93FFCP PHASE2:Hg19::chr6:56716896..56716928,-#_985a216ca895d2814998af4fe427be4bp8@DST
3.0e-93FFCP PHASE1:Hg19::chr6:56716896..56716928,-#_985a216ca895d2814998af4fe427be4bp8@DST
4.29e-93FFCP PHASE2:Hg19::chr17:7558857..7558903,+#_50ded935a9e23ebc48e711c7b65cddd9p@chr17:7558857..7558903, +
4.29e-93FFCP PHASE1:Hg19::chr17:7558857..7558903,+#_50ded935a9e23ebc48e711c7b65cddd9p@chr17:7558857..7558903, +
4.3e-93FFCP PHASE1:Hg19::chr5:11384929..11384947,-#_f7167de91605635779a1493155b32f7dp15@CTNND2
4.3e-93FFCP PHASE2:Hg19::chr5:11384929..11384947,-#_f7167de91605635779a1493155b32f7dp15@CTNND2
4.84e-93FFCP PHASE1:Hg19::chr10:25940658..25940700,+#_eb32932cbe6a9ffa048ad6c26e8c0f7ep1@ENST00000450270
4.84e-93FFCP PHASE2:Hg19::chr10:25940658..25940700,+#_eb32932cbe6a9ffa048ad6c26e8c0f7ep1@ENST00000450270
5.06e-93FFCP PHASE2:Hg19::chr1:156217805..156217817,-#_bdb7182afdb5957d85f0b94deef416b3p2@PAQR6
5.06e-93FFCP PHASE1:Hg19::chr1:156217805..156217817,-#_bdb7182afdb5957d85f0b94deef416b3p2@PAQR6
5.69e-93FFCP PHASE1:Hg19::chr15:30261066..30261096,-#_8a7dab9afda25621044b8df549e4992fp12@TJP1
5.69e-93FFCP PHASE2:Hg19::chr15:30261066..30261096,-#_8a7dab9afda25621044b8df549e4992fp12@TJP1
6.08e-93FFCP PHASE2:Hg19::chr7:29519599..29519612,+#_1357df9e1005e59e2ac927f8bbb2549bp9@CHN2
6.08e-93FFCP PHASE1:Hg19::chr7:29519599..29519612,+#_1357df9e1005e59e2ac927f8bbb2549bp9@CHN2
6.68e-93FFCP PHASE1:Hg19::chr2:73286253..73286279,-#_9048d4381bd4d32224d0b49f5b937b09p3@SFXN5
6.68e-93FFCP PHASE2:Hg19::chr2:73286253..73286279,-#_9048d4381bd4d32224d0b49f5b937b09p3@SFXN5
1.1e-92FFCP PHASE2:Hg19::chr16:72459772..72459794,+#_602e9d50377331bac890e8c1454fb39bp2@uc002fch.1
1.1e-92FFCP PHASE1:Hg19::chr16:72459772..72459794,+#_602e9d50377331bac890e8c1454fb39bp2@uc002fch.1
2.68e-92FFCP PHASE1:Hg19::chr10:62149542..62149590,-#_ad0ca32f9a74476c44ed042b248e695dp1@ANK3
2.68e-92FFCP PHASE2:Hg19::chr10:62149542..62149590,-#_ad0ca32f9a74476c44ed042b248e695dp1@ANK3










Property "Property value" (as page type) with input value "UBPROP:0000001 "Region of the gastrula which gives rise to the neural plate.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.