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UBERON:0010046

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Name:entire pharyngeal arch associated mesenchyme
Namespace:FANTOM
Definition:"The sum total of mesenchymal tissue in the pharyngeal arch region." [UBERON:cjm]
Xrefs:
links:

EHDAA2:0001459

EMAPA:16550
Synonyms: "associated mesenchyme of pharyngeal region" EXACT [EMAPA:16550]
"entire branchial arch associated mesenchyme" EXACT [UBERON:cjm]
"pharyngeal arch associated mesenchyme" EXACT [EHDAA2:0001459]

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0004119(endoderm-derived structure),UBERON:0005291(embryonic tissue),UBERON:0007524(dense mesenchyme tissue),UBERON:0010314(structure with developmental contribution from neural crest)
part_of:UBERON:0008814(pharyngeal arch system)



Children

part of:UBERON:0009494 (pharyngeal arch mesenchymal region),UBERON:0010359 (pharyngeal arch mesenchyme from neural crest)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010046 (entire pharyngeal arch associated mesenchyme), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_2508a78257f676e7a0d635ba6c2b463cp14@C17orf67
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_2508a78257f676e7a0d635ba6c2b463cp14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_700415fabca4ed2c1df673b701082f85p12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_700415fabca4ed2c1df673b701082f85p12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_700415fabca4ed2c1df673b701082f85p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_700415fabca4ed2c1df673b701082f85p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_700415fabca4ed2c1df673b701082f85p11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_700415fabca4ed2c1df673b701082f85p13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_700415fabca4ed2c1df673b701082f85p@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_700415fabca4ed2c1df673b701082f85p13@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_597df48b0c99b9dea0b0c154cd7150ccp14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_597df48b0c99b9dea0b0c154cd7150ccp14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_597df48b0c99b9dea0b0c154cd7150ccp@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_597df48b0c99b9dea0b0c154cd7150ccp@chr5:75912402..75912418, -
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_72077ecc8cc0189cc9628f6767e82266p@chr4:151505582..151505614, +
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_72077ecc8cc0189cc9628f6767e82266p@chr4:151505582..151505614, +
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_2b915803edc2e92935266c9ccef2d23fp@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_2b915803edc2e92935266c9ccef2d23fp9@C17orf67
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_2b915803edc2e92935266c9ccef2d23fp17@RSRC1
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_2b915803edc2e92935266c9ccef2d23f+, p@chr8:57354278..57354286
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_2b915803edc2e92935266c9ccef2d23fp17@RSRC1
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_2b915803edc2e92935266c9ccef2d23fp9@C17orf67
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_1fe46f818b83c8e39373db7b8f1703d5p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_1fe46f818b83c8e39373db7b8f1703d5p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_bf814cc8904a6bca2a8f800e32b980b8p1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_bf814cc8904a6bca2a8f800e32b980b8p@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_bf814cc8904a6bca2a8f800e32b980b8p@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_bf814cc8904a6bca2a8f800e32b980b8p7@ALX1
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_bf814cc8904a6bca2a8f800e32b980b8p7@ALX1
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_bf814cc8904a6bca2a8f800e32b980b8p1@AK123925
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_6a5f132323d66ca717c33038b07e55a8p@chr2:33519090..33519092, +
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_6a5f132323d66ca717c33038b07e55a8p23@FLT1
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_6a5f132323d66ca717c33038b07e55a8p23@FLT1
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_6a5f132323d66ca717c33038b07e55a8p@chr2:33519090..33519092, +
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_d2b016ae03339f258b1b363c18dac4f2p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_d2b016ae03339f258b1b363c18dac4f2p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_d2b016ae03339f258b1b363c18dac4f2p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_d2b016ae03339f258b1b363c18dac4f2-, p@chr8:57353779..57353790
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_d2b016ae03339f258b1b363c18dac4f2p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_d2b016ae03339f258b1b363c18dac4f2p@chr8:57353666..57353675, -
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_ff1a18c3b78f6c089acc1bae4bada67fp2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_ff1a18c3b78f6c089acc1bae4bada67fp2@TAS1R1
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_ff1a18c3b78f6c089acc1bae4bada67fp12@FAM65C
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_ff1a18c3b78f6c089acc1bae4bada67fp8@LHX8
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_ff1a18c3b78f6c089acc1bae4bada67fp12@FAM65C
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_ff1a18c3b78f6c089acc1bae4bada67fp8@LHX8
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_4ec2c5b860fa7fe847be03718ba90655p@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_4ec2c5b860fa7fe847be03718ba90655p@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_4ec2c5b860fa7fe847be03718ba90655p@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_4ec2c5b860fa7fe847be03718ba90655p@chr16:67687543..67687559, -
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_798b1df08e9dd317ac0daa2aa97fe1cep@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_798b1df08e9dd317ac0daa2aa97fe1cep@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_798b1df08e9dd317ac0daa2aa97fe1cep@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_798b1df08e9dd317ac0daa2aa97fe1cep@chr6:46190219..46190230, -
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_783cb357cb5276e291c3220a415d3bddp5@PENK
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_783cb357cb5276e291c3220a415d3bddp5@PENK
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_783cb357cb5276e291c3220a415d3bddp4@CPZ
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_783cb357cb5276e291c3220a415d3bddp@chr10:15760985..15760992, -
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_783cb357cb5276e291c3220a415d3bddp4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_783cb357cb5276e291c3220a415d3bddp@chr10:15760985..15760992, -
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_15af2a9daf426eebc45b1dba21a30522p9@SIX1
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_15af2a9daf426eebc45b1dba21a30522p9@SIX1
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_24130e3f59f1967a1f0625425991a776p@chr6:134327986..134327991, -
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_24130e3f59f1967a1f0625425991a776p@chr6:134327986..134327991, -
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_92a5fd56bec2fd9e89f4ee68d8131080p@chr8:57353676..57353688, -
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_92a5fd56bec2fd9e89f4ee68d8131080p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_92a5fd56bec2fd9e89f4ee68d8131080p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_92a5fd56bec2fd9e89f4ee68d8131080-, p@chr8:57353676..57353688
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_fa519bee7d8a65332929b0a0d3c685d4p12@FBN2
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_fa519bee7d8a65332929b0a0d3c685d4p4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_fa519bee7d8a65332929b0a0d3c685d4-, p@chr5:19721484..19721507
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_fa519bee7d8a65332929b0a0d3c685d4p4@PLAC1
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_fa519bee7d8a65332929b0a0d3c685d4p12@FBN2
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_fa519bee7d8a65332929b0a0d3c685d4p@chr5:19721484..19721507, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_50a17815b2b9e2f7909b9397529cf8b0-, p@chr8:57353982..57353991
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_50a17815b2b9e2f7909b9397529cf8b0p@chr8:57353982..57353991, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_50a17815b2b9e2f7909b9397529cf8b0p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_50a17815b2b9e2f7909b9397529cf8b0p@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_50a17815b2b9e2f7909b9397529cf8b0p@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_50a17815b2b9e2f7909b9397529cf8b0+, p@chr8:57354360..57354367
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_b0531acb1ece9f640a5ab8209a891638p10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_b0531acb1ece9f640a5ab8209a891638p7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_b0531acb1ece9f640a5ab8209a891638p7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_b0531acb1ece9f640a5ab8209a891638p10@ITGA8
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_f07014532e8e2d2c418abd73afae91e6p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_f07014532e8e2d2c418abd73afae91e6p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_f07014532e8e2d2c418abd73afae91e6p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_f07014532e8e2d2c418abd73afae91e6p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_f07014532e8e2d2c418abd73afae91e6p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_f07014532e8e2d2c418abd73afae91e6p@chr17:79071218..79071221, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_3e6a5970818fa30ef0e0c016a105790dp@chr1:21904551..21904569, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_3e6a5970818fa30ef0e0c016a105790dp@chr1:21904551..21904569, -
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_460839d67581b150e799cbf990a461b9p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_460839d67581b150e799cbf990a461b9p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_460839d67581b150e799cbf990a461b9p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_460839d67581b150e799cbf990a461b9-, p@chr8:57359975..57359992
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_460839d67581b150e799cbf990a461b9p18@MEF2D
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_460839d67581b150e799cbf990a461b9p18@MEF2D
4.2e-29FFCP PHASE2:Hg19::chr1:75602768..75602785,+#_804be6c0b7cf7dcddd2bd1d7488966c7+, p@chr1:75602768..75602785
4.2e-29FFCP PHASE1:Hg19::chr4:151503350..151503358,+#_804be6c0b7cf7dcddd2bd1d7488966c7p11@MAB21L2