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UBERON:0010364

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Name:dermal skeleton
Namespace:FANTOM
Definition:"Skeletal subdivision that undergoes direct development and includes elements that either develop in association with the basement membrane of the ectoderm or are homologous with such elements; includes dermatocranium, components of the appendicular skeleton, teeth and tooth-like elements of the oropharynx, and integumentary elements." [VSAO:0000035]
Xrefs:
links:

VSAO:0000035

XAO:0004025
Synonyms: "dermal skeletal system" RELATED [VSAO:curator]
"dermoskeleton" RELATED [VSAO:curator]
"desmoskeleton" RELATED [VSAO:curator]
"exoskeleton" BROAD [VSAO:curator]
Comments:This ontology covers metazoa, so we do not use exoskeleton as primary label, as in VSAO

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0010912(subdivision of skeleton)



Children

part of:UBERON:0003113 (dermatocranium),UBERON:0008907 (dermal bone)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 10813-111B3 (normal embryonic palatal mesenchymal cell line:HEPM)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0010364 (dermal skeleton), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr17:54893192..54893195,-#_9f8ddde6c79874b4f3b10cb4b7463c37p14@C17orf67
5.42e-195FFCP PHASE1:Hg19::chr17:54893192..54893195,-#_9f8ddde6c79874b4f3b10cb4b7463c37p14@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893269..54893278,-#_e4ab642b3d91985d51eb87be396c331fp11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893292..54893300,-#_e4ab642b3d91985d51eb87be396c331fp13@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr17:54893213..54893220,-#_e4ab642b3d91985d51eb87be396c331fp12@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr8:57353655..57353662,-#_e4ab642b3d91985d51eb87be396c331fp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893269..54893278,-#_e4ab642b3d91985d51eb87be396c331fp11@C17orf67
9.37e-99FFCP PHASE1:Hg19::chr17:54893213..54893220,-#_e4ab642b3d91985d51eb87be396c331fp12@C17orf67
9.37e-99FFCP PHASE2:Hg19::chr8:57353655..57353662,-#_e4ab642b3d91985d51eb87be396c331fp@chr8:57353655..57353662, -
9.37e-99FFCP PHASE2:Hg19::chr17:54893292..54893300,-#_e4ab642b3d91985d51eb87be396c331fp13@C17orf67
2.39e-66FFCP PHASE1:Hg19::chr4:151503647..151503656,+#_6f720d0105e4464b7e45c9a931c8821bp14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr4:151503647..151503656,+#_6f720d0105e4464b7e45c9a931c8821bp14@MAB21L2
2.39e-66FFCP PHASE2:Hg19::chr5:75912402..75912418,-#_6f720d0105e4464b7e45c9a931c8821bp@chr5:75912402..75912418, -
2.39e-66FFCP PHASE1:Hg19::chr5:75912402..75912418,-#_6f720d0105e4464b7e45c9a931c8821bp@chr5:75912402..75912418, -
4.66e-66FFCP PHASE1:Hg19::chr4:151505582..151505614,+#_b50d4e805aec7995bad6f50965516ee8p@chr4:151505582..151505614, +
4.66e-66FFCP PHASE2:Hg19::chr4:151505582..151505614,+#_b50d4e805aec7995bad6f50965516ee8p@chr4:151505582..151505614, +
1.46e-50FFCP PHASE1:Hg19::chr8:57354278..57354286,+#_8c2afac1912b00ea38891beeb54a06c3p@chr8:57354278..57354286, +
1.46e-50FFCP PHASE2:Hg19::chr17:54893196..54893207,-#_8c2afac1912b00ea38891beeb54a06c3p9@C17orf67
1.46e-50FFCP PHASE1:Hg19::chr3:157823323..157823328,+#_8c2afac1912b00ea38891beeb54a06c3p17@RSRC1
1.46e-50FFCP PHASE2:Hg19::chr8:57354278..57354286,+#_8c2afac1912b00ea38891beeb54a06c3+, p@chr8:57354278..57354286
1.46e-50FFCP PHASE1:Hg19::chr17:54893196..54893207,-#_8c2afac1912b00ea38891beeb54a06c3p9@C17orf67
1.46e-50FFCP PHASE2:Hg19::chr3:157823323..157823328,+#_8c2afac1912b00ea38891beeb54a06c3p17@RSRC1
2.42e-50FFCP PHASE1:Hg19::chr8:57802672..57802682,-#_92c57890dee49b5d3217886d187f2e23p@chr8:57802672..57802682, -
2.42e-50FFCP PHASE2:Hg19::chr8:57802672..57802682,-#_92c57890dee49b5d3217886d187f2e23p@chr8:57802672..57802682, -
3.99e-50FFCP PHASE1:Hg19::chr12:85673913..85673919,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp7@ALX1
3.99e-50FFCP PHASE2:Hg19::chr17:76930661..76930674,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr5:75913767..75913778,-#_5e8cf187fe88aa68b4df2cafbecf0f8fp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr5:75913767..75913778,-#_5e8cf187fe88aa68b4df2cafbecf0f8fp@chr5:75913767..75913778, -
3.99e-50FFCP PHASE1:Hg19::chr17:76930661..76930674,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp1@AK123925
3.99e-50FFCP PHASE2:Hg19::chr12:85673913..85673919,+#_5e8cf187fe88aa68b4df2cafbecf0f8fp7@ALX1
6.58e-50FFCP PHASE1:Hg19::chr2:33519090..33519092,+#_720b2e06fdb5a37caf4e9f256b8a16bbp@chr2:33519090..33519092, +
6.58e-50FFCP PHASE1:Hg19::chr13:28961248..28961262,-#_720b2e06fdb5a37caf4e9f256b8a16bbp23@FLT1
6.58e-50FFCP PHASE2:Hg19::chr2:33519090..33519092,+#_720b2e06fdb5a37caf4e9f256b8a16bbp@chr2:33519090..33519092, +
6.58e-50FFCP PHASE2:Hg19::chr13:28961248..28961262,-#_720b2e06fdb5a37caf4e9f256b8a16bbp23@FLT1
6.62e-41FFCP PHASE2:Hg19::chr8:57353666..57353675,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353666..57353675, -
6.62e-41FFCP PHASE1:Hg19::chr8:57354143..57354152,+#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE1:Hg19::chr8:57353779..57353790,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353779..57353790, -
6.62e-41FFCP PHASE2:Hg19::chr8:57354143..57354152,+#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57354143..57354152, +
6.62e-41FFCP PHASE2:Hg19::chr8:57353779..57353790,-#_1ef8f90c58514c1ed12f6d485354f5c3-, p@chr8:57353779..57353790
6.62e-41FFCP PHASE1:Hg19::chr8:57353666..57353675,-#_1ef8f90c58514c1ed12f6d485354f5c3p@chr8:57353666..57353675, -
1.48e-40FFCP PHASE1:Hg19::chr1:75600308..75600316,+#_01e90da7f6f8266da00851d7faae200ep8@LHX8
1.48e-40FFCP PHASE2:Hg19::chr1:6615391..6615401,+#_01e90da7f6f8266da00851d7faae200ep2@TAS1R1
1.48e-40FFCP PHASE1:Hg19::chr20:49253452..49253461,-#_01e90da7f6f8266da00851d7faae200ep12@FAM65C
1.48e-40FFCP PHASE2:Hg19::chr1:75600308..75600316,+#_01e90da7f6f8266da00851d7faae200ep8@LHX8
1.48e-40FFCP PHASE1:Hg19::chr1:6615391..6615401,+#_01e90da7f6f8266da00851d7faae200ep2@TAS1R1
1.48e-40FFCP PHASE2:Hg19::chr20:49253452..49253461,-#_01e90da7f6f8266da00851d7faae200ep12@FAM65C
2.21e-40FFCP PHASE2:Hg19::chr16:67687543..67687559,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr16:67687543..67687559, -
2.21e-40FFCP PHASE1:Hg19::chr16:67687543..67687559,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr16:67687543..67687559, -
2.21e-40FFCP PHASE2:Hg19::chr5:75912831..75912842,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr5:75912831..75912842, -
2.21e-40FFCP PHASE1:Hg19::chr5:75912831..75912842,-#_b2ef63791b27ab22b7bf1474026d7bfcp@chr5:75912831..75912842, -
3.3e-40FFCP PHASE2:Hg19::chr6:46190219..46190230,-#_69c7c26f2b5be4f4295a79e204ccc110p@chr6:46190219..46190230, -
3.3e-40FFCP PHASE1:Hg19::chr9:125165007..125165016,+#_69c7c26f2b5be4f4295a79e204ccc110p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE2:Hg19::chr9:125165007..125165016,+#_69c7c26f2b5be4f4295a79e204ccc110p@chr9:125165007..125165016, +
3.3e-40FFCP PHASE1:Hg19::chr6:46190219..46190230,-#_69c7c26f2b5be4f4295a79e204ccc110p@chr6:46190219..46190230, -
1.84e-34FFCP PHASE1:Hg19::chr8:57359557..57359570,-#_f937a306de2fba045477d5bc79a5af4ap5@PENK
1.84e-34FFCP PHASE2:Hg19::chr8:57359557..57359570,-#_f937a306de2fba045477d5bc79a5af4ap5@PENK
1.84e-34FFCP PHASE2:Hg19::chr4:8594472..8594473,+#_f937a306de2fba045477d5bc79a5af4ap4@CPZ
1.84e-34FFCP PHASE1:Hg19::chr10:15760985..15760992,-#_f937a306de2fba045477d5bc79a5af4ap@chr10:15760985..15760992, -
1.84e-34FFCP PHASE2:Hg19::chr10:15760985..15760992,-#_f937a306de2fba045477d5bc79a5af4ap@chr10:15760985..15760992, -
1.84e-34FFCP PHASE1:Hg19::chr4:8594472..8594473,+#_f937a306de2fba045477d5bc79a5af4ap4@CPZ
2.58e-34FFCP PHASE2:Hg19::chr14:61125018..61125037,-#_d4c11d4be89cf54544c14b782764a510p9@SIX1
2.58e-34FFCP PHASE1:Hg19::chr14:61125018..61125037,-#_d4c11d4be89cf54544c14b782764a510p9@SIX1
5.05e-34FFCP PHASE1:Hg19::chr6:134327986..134327991,-#_bcc2f27a6ff75d50848f6a06857a1a8ep@chr6:134327986..134327991, -
5.05e-34FFCP PHASE2:Hg19::chr6:134327986..134327991,-#_bcc2f27a6ff75d50848f6a06857a1a8ep@chr6:134327986..134327991, -
7.06e-34FFCP PHASE2:Hg19::chr13:58291223..58291226,+#_a441384d2082bc297edd3380107d3ca0p@chr13:58291223..58291226, +
7.06e-34FFCP PHASE1:Hg19::chr8:57353676..57353688,-#_a441384d2082bc297edd3380107d3ca0-, p@chr8:57353676..57353688
7.06e-34FFCP PHASE2:Hg19::chr8:57353676..57353688,-#_a441384d2082bc297edd3380107d3ca0p@chr8:57353676..57353688, -
7.06e-34FFCP PHASE1:Hg19::chr13:58291223..58291226,+#_a441384d2082bc297edd3380107d3ca0p@chr13:58291223..58291226, +
9.85e-34FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_02dfb8d21a4ea335f610412a711de0bcp12@FBN2
9.85e-34FFCP PHASE2:Hg19::chrX:133792540..133792551,-#_02dfb8d21a4ea335f610412a711de0bcp4@PLAC1
9.85e-34FFCP PHASE2:Hg19::chr5:19721484..19721507,-#_02dfb8d21a4ea335f610412a711de0bc-, p@chr5:19721484..19721507
9.85e-34FFCP PHASE1:Hg19::chrX:133792540..133792551,-#_02dfb8d21a4ea335f610412a711de0bcp4@PLAC1
9.85e-34FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_02dfb8d21a4ea335f610412a711de0bcp12@FBN2
9.85e-34FFCP PHASE1:Hg19::chr5:19721484..19721507,-#_02dfb8d21a4ea335f610412a711de0bcp@chr5:19721484..19721507, -
7.48e-30FFCP PHASE2:Hg19::chr8:57354360..57354367,+#_a7761f2eb878c3b347aa4a9cf9cfabeb+, p@chr8:57354360..57354367
7.48e-30FFCP PHASE1:Hg19::chr8:57353982..57353991,-#_a7761f2eb878c3b347aa4a9cf9cfabeb-, p@chr8:57353982..57353991
7.48e-30FFCP PHASE2:Hg19::chr8:57353982..57353991,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353982..57353991, -
7.48e-30FFCP PHASE1:Hg19::chr8:57353804..57353821,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353804..57353821, -
7.48e-30FFCP PHASE1:Hg19::chr8:57354360..57354367,+#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57354360..57354367, +
7.48e-30FFCP PHASE2:Hg19::chr8:57353804..57353821,-#_a7761f2eb878c3b347aa4a9cf9cfabebp@chr8:57353804..57353821, -
9.99e-30FFCP PHASE1:Hg19::chr10:15762107..15762114,-#_324a6be27eb20629f408a17c73d35597p10@ITGA8
9.99e-30FFCP PHASE1:Hg19::chr3:157824322..157824334,-#_324a6be27eb20629f408a17c73d35597p7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr3:157824322..157824334,-#_324a6be27eb20629f408a17c73d35597p7@SHOX2
9.99e-30FFCP PHASE2:Hg19::chr10:15762107..15762114,-#_324a6be27eb20629f408a17c73d35597p10@ITGA8
1.33e-29FFCP PHASE2:Hg19::chrX:132670143..132670152,-#_69d19c689434ada8c00a7743514e5c14p@chrX:132670143..132670152, -
1.33e-29FFCP PHASE2:Hg19::chr17:79071218..79071221,-#_69d19c689434ada8c00a7743514e5c14p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr17:79071218..79071221,-#_69d19c689434ada8c00a7743514e5c14p@chr17:79071218..79071221, -
1.33e-29FFCP PHASE1:Hg19::chr22:28193943..28193956,-#_69d19c689434ada8c00a7743514e5c14p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE2:Hg19::chr22:28193943..28193956,-#_69d19c689434ada8c00a7743514e5c14p@chr22:28193943..28193956, -
1.33e-29FFCP PHASE1:Hg19::chrX:132670143..132670152,-#_69d19c689434ada8c00a7743514e5c14p@chrX:132670143..132670152, -
1.78e-29FFCP PHASE1:Hg19::chr1:21904551..21904569,-#_7471d21b8636a8be1c7e21d7d415b5bcp@chr1:21904551..21904569, -
1.78e-29FFCP PHASE2:Hg19::chr1:21904551..21904569,-#_7471d21b8636a8be1c7e21d7d415b5bcp@chr1:21904551..21904569, -
3.16e-29FFCP PHASE2:Hg19::chr14:89044406..89044416,+#_e6447f24fa4e2d9d2426a1693898ca60p@chr14:89044406..89044416, +
3.16e-29FFCP PHASE1:Hg19::chr1:156470861..156470868,-#_e6447f24fa4e2d9d2426a1693898ca60p18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr8:57359975..57359992,-#_e6447f24fa4e2d9d2426a1693898ca60p@chr8:57359975..57359992, -
3.16e-29FFCP PHASE2:Hg19::chr8:57359975..57359992,-#_e6447f24fa4e2d9d2426a1693898ca60-, p@chr8:57359975..57359992
3.16e-29FFCP PHASE2:Hg19::chr1:156470861..156470868,-#_e6447f24fa4e2d9d2426a1693898ca60p18@MEF2D
3.16e-29FFCP PHASE1:Hg19::chr14:89044406..89044416,+#_e6447f24fa4e2d9d2426a1693898ca60p@chr14:89044406..89044416, +
4.2e-29FFCP PHASE1:Hg19::chr1:6615468..6615485,+#_1b168629e9c702f3dc4dfcb7b08bb736p1@TAS1R1
4.2e-29FFCP PHASE1:Hg19::chr15:52606315..52606320,-#_1b168629e9c702f3dc4dfcb7b08bb736p@chr15:52606315..52606320, -