Personal tools

CL:0000197: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(2 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{CL
{{CL
|id=CL:0000197
|alt_id=
|name=receptor cell
|namespace=cell
|def=
|xref=
|is_a=CL:0000144
|synonym=
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=CL:0000197
|is_a=CL:0000003
|is_obsolete=
|located_in=
|located_in=
|name=receptor cell
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym=
|union_of=
|xref=
}}
}}

Latest revision as of 16:31, 12 September 2014

Name:receptor cell
Namespace:FANTOM


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000003(native cell)



Children


is a:CL:0000006 (neuronal receptor cell),CL:0000098 (sensory epithelial cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results Mouse (Mus musculus)

  • 11933-125I7 (Olfactory epithelial cells, donor1)
  • 11934-125I8 (Olfactory epithelial cells, donor2)
  • 11935-125I9 (Olfactory epithelial cells, donor3)
  • 11936-126A1 (Olfactory epithelial cells, donor4)
  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000197 (receptor cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.07e-130FFCP PHASE2:Hg19::chr1:110662969..110662978,+#_41aeeec02cd4e16b0593a83668561f56p@chr1:110662969..110662978, +
1.07e-130FFCP PHASE1:Hg19::chr1:110662969..110662978,+#_41aeeec02cd4e16b0593a83668561f56p@chr1:110662969..110662978, +
5.17e-105FFCP PHASE2:Hg19::chrX:69308592..69308633,+#_ec6cb7824c8f69a5787b18c66d6a0bdbp@chrX:69308592..69308633, +
5.17e-105FFCP PHASE1:Hg19::chrX:69308592..69308633,+#_ec6cb7824c8f69a5787b18c66d6a0bdbp@chrX:69308592..69308633, +
7.0e-88FFCP PHASE1:Hg19::chr1:110662936..110662945,+#_d38632db69a580a3b4023a2c94414ae5p@chr1:110662936..110662945, +
7.0e-88FFCP PHASE2:Hg19::chr1:110662936..110662945,+#_d38632db69a580a3b4023a2c94414ae5p@chr1:110662936..110662945, +
8.76e-88FFCP PHASE1:Hg19::chr2:228246460..228246471,-#_ef9a87f66e3fbe3152f89a1276cdf965p4@TM4SF20
8.76e-88FFCP PHASE2:Hg19::chr2:228246460..228246471,-#_ef9a87f66e3fbe3152f89a1276cdf965p4@TM4SF20
1.87e-86FFCP PHASE1:Mm9::chr6:29428397..29428407,-#_13da6b5f98214549a3311eca6dad083fp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_13da6b5f98214549a3311eca6dad083fp@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_13da6b5f98214549a3311eca6dad083fp1@Strc
1.87e-86FFCP PHASE1:Mm9::chr15:58022966..58022995,-#_13da6b5f98214549a3311eca6dad083fp@chr15:58022966..58022995, -
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_13da6b5f98214549a3311eca6dad083fp15@Mctp1
1.87e-86FFCP PHASE2:Mm9::chr10:107349309..107349318,-#_13da6b5f98214549a3311eca6dad083fp4@Otogl
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_13da6b5f98214549a3311eca6dad083fp3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr17:13983179..13983190,+#_13da6b5f98214549a3311eca6dad083fp@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699228..43699239,+#_13da6b5f98214549a3311eca6dad083fp@chr13:43699228..43699239, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_13da6b5f98214549a3311eca6dad083fp@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_13da6b5f98214549a3311eca6dad083fp3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_13da6b5f98214549a3311eca6dad083fp3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:55255289..55255299,+#_13da6b5f98214549a3311eca6dad083fp2@Tectb
1.87e-86FFCP PHASE1:Mm9::chr15:97806034..97806061,+#_13da6b5f98214549a3311eca6dad083fp@chr15:97806034..97806061, +
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_13da6b5f98214549a3311eca6dad083fp@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_13da6b5f98214549a3311eca6dad083fp@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_13da6b5f98214549a3311eca6dad083fp@chr10:67371994..67372010, +
1.87e-86FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_13da6b5f98214549a3311eca6dad083fp@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr17:13983095..13983100,+#_13da6b5f98214549a3311eca6dad083fp@chr17:13983095..13983100, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_13da6b5f98214549a3311eca6dad083fp2@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_13da6b5f98214549a3311eca6dad083fp@chr7:29733825..29733837, -
1.87e-86FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_13da6b5f98214549a3311eca6dad083fp@chr1:93235228..93235249, +
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_13da6b5f98214549a3311eca6dad083fp@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_13da6b5f98214549a3311eca6dad083fp@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_13da6b5f98214549a3311eca6dad083fp@chr19:55256373..55256384, +
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_13da6b5f98214549a3311eca6dad083fp@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_13da6b5f98214549a3311eca6dad083fp@chr15:85334335..85334353, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_13da6b5f98214549a3311eca6dad083fp@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_13da6b5f98214549a3311eca6dad083fp@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr12:109905399..109905416,+#_13da6b5f98214549a3311eca6dad083fp@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_13da6b5f98214549a3311eca6dad083fp@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_13da6b5f98214549a3311eca6dad083fp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_13da6b5f98214549a3311eca6dad083fp2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_13da6b5f98214549a3311eca6dad083fp@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_13da6b5f98214549a3311eca6dad083fp@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_13da6b5f98214549a3311eca6dad083fp4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_13da6b5f98214549a3311eca6dad083fp4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_13da6b5f98214549a3311eca6dad083fp@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_13da6b5f98214549a3311eca6dad083fp@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_13da6b5f98214549a3311eca6dad083fp1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_13da6b5f98214549a3311eca6dad083fp@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_13da6b5f98214549a3311eca6dad083fp@chr4:101908153..101908163, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_13da6b5f98214549a3311eca6dad083fp@chr14:31283085..31283097, -
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_13da6b5f98214549a3311eca6dad083fp@chr6:113251614..113251623, +
1.87e-86FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_13da6b5f98214549a3311eca6dad083fp1@Dytn
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_13da6b5f98214549a3311eca6dad083fp@chr19:10536767..10536777, -
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_13da6b5f98214549a3311eca6dad083fp@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_13da6b5f98214549a3311eca6dad083fp@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_13da6b5f98214549a3311eca6dad083fp1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_13da6b5f98214549a3311eca6dad083fp@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_13da6b5f98214549a3311eca6dad083fp@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_13da6b5f98214549a3311eca6dad083fp@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_13da6b5f98214549a3311eca6dad083fp41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_13da6b5f98214549a3311eca6dad083fp@chr6:86746562..86746579, -
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_13da6b5f98214549a3311eca6dad083fp3@Otogl
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_13da6b5f98214549a3311eca6dad083fp@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_13da6b5f98214549a3311eca6dad083fp2@Otol1
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_13da6b5f98214549a3311eca6dad083fp@chr17:27252925..27252939, +
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_13da6b5f98214549a3311eca6dad083fp@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_13da6b5f98214549a3311eca6dad083fp@chr2:53464178..53464186, +
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_13da6b5f98214549a3311eca6dad083fp3@Strc
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_13da6b5f98214549a3311eca6dad083fp4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr11:94371127..94371139,-#_13da6b5f98214549a3311eca6dad083fp@chr11:94371127..94371139, -
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_13da6b5f98214549a3311eca6dad083fp2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chr15:89215319..89215330,+#_13da6b5f98214549a3311eca6dad083fp@chr15:89215319..89215330, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052297..109052300,-#_13da6b5f98214549a3311eca6dad083fp2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_13da6b5f98214549a3311eca6dad083fp10@Otof
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_13da6b5f98214549a3311eca6dad083fp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_13da6b5f98214549a3311eca6dad083fp@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_13da6b5f98214549a3311eca6dad083fp@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_13da6b5f98214549a3311eca6dad083fp@chr15:103146966..103146971, -
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_13da6b5f98214549a3311eca6dad083fp@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_13da6b5f98214549a3311eca6dad083fp2@Gm1322
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_13da6b5f98214549a3311eca6dad083fp@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr7:27964761..27964768,+#_13da6b5f98214549a3311eca6dad083fp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr1:94627290..94627299,-#_13da6b5f98214549a3311eca6dad083fp@chr1:94627290..94627299, -
1.87e-86FFCP PHASE2:Mm9::chr12:109905468..109905474,+#_13da6b5f98214549a3311eca6dad083fp@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_13da6b5f98214549a3311eca6dad083fp@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_13da6b5f98214549a3311eca6dad083fp@chr2:128881546..128881553, -
1.87e-86FFCP PHASE2:Mm9::chr16:93971367..93971379,-#_13da6b5f98214549a3311eca6dad083fp@chr16:93971367..93971379, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_13da6b5f98214549a3311eca6dad083fp4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_13da6b5f98214549a3311eca6dad083fp@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_13da6b5f98214549a3311eca6dad083fp4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_13da6b5f98214549a3311eca6dad083fp@chr14:47293487..47293493, -
1.87e-86FFCP PHASE2:Mm9::chr6:29428397..29428407,-#_13da6b5f98214549a3311eca6dad083fp@chr6:29428397..29428407, -
1.87e-86FFCP PHASE2:Mm9::chr4:115556939..115556945,+#_13da6b5f98214549a3311eca6dad083fp4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_13da6b5f98214549a3311eca6dad083fp@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_13da6b5f98214549a3311eca6dad083fp@chr7:27964761..27964768, +
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_13da6b5f98214549a3311eca6dad083fp21@Espn
1.87e-86FFCP PHASE2:Mm9::chr6:113251606..113251613,+#_13da6b5f98214549a3311eca6dad083fp@chr6:113251606..113251613, +
1.87e-86FFCP PHASE2:Mm9::chr2:170417150..170417155,-#_13da6b5f98214549a3311eca6dad083fp@chr2:170417150..170417155, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_13da6b5f98214549a3311eca6dad083fp@chr9:56208792..56208814, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000197&oldid=3275228"