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CL:0000552

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Name:orthochromatic erythroblast
Namespace:FANTOM
Definition:"The final stage of the nucleated, immature erythrocyte, before nuclear loss. Typically the cytoplasm is described as acidophilic, but it still shows a faint polychromatic tint. The nucleus is small and initially may still have coarse, clumped chromatin, as in its precursor, the polychromatophilic erythroblast, but ultimately it becomes pyknotic, and appears as a deeply staining, blue-black, homogeneous structureless mass. The nucleus is often eccentric and sometimes lobulated." [ISBN:0721601464]
Xrefs:
links:
FMA:84646
Synonyms: "acidophilic erythroblast" EXACT [ISBN:0721601464]
"eosinophilic erythroblast" EXACT [ISBN:0721601464]
"late erythoblast" EXACT []
"orthochromatic normoblast" EXACT [ISBN:0721601464]
"pyknotic eto enrythroblast" EXACT [ISBN:0721601464]


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data

Parents

is_a:CL:0000765(erythroblast)
develops_from:CL:0000550(polychromatophilic erythroblast)



Children


develops from:CL:0000558 (reticulocyte)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.



Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000552 (orthochromatic erythroblast), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data

P-valueFFCPShort description
3.29e-195FFCP PHASE1:Hg19::chr6:155472342..155472346,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr6:155472342..155472346, -
3.29e-195FFCP PHASE1:Hg19::chr12:131245491..131245492,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr12:131245491..131245492, +
3.29e-195FFCP PHASE1:Hg19::chr7:23205190..23205198,+#_ccf2239d507bb0b2b1ce7b5538a0129fp10@KLHL7
3.29e-195FFCP PHASE1:Hg19::chr10:94679592..94679594,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr10:94679592..94679594, -
3.29e-195FFCP PHASE1:Hg19::chr1:25598961..25598966,+#_ccf2239d507bb0b2b1ce7b5538a0129fp5@RHD
3.29e-195FFCP PHASE1:Hg19::chr13:106256314..106256318,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr13:106256314..106256318, +
3.29e-195FFCP PHASE1:Hg19::chr2:62801311..62801318,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:62801311..62801318, +
3.29e-195FFCP PHASE1:Hg19::chr18:11740276..11740278,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr18:11740276..11740278, +
3.29e-195FFCP PHASE2:Hg19::chr9:123853258..123853276,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr9:123853258..123853276, -
3.29e-195FFCP PHASE2:Hg19::chr2:62801311..62801318,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:62801311..62801318, +
3.29e-195FFCP PHASE2:Hg19::chr2:71833597..71833600,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:71833597..71833600, +
3.29e-195FFCP PHASE1:Hg19::chr2:87816262..87816269,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:87816262..87816269, +
3.29e-195FFCP PHASE2:Hg19::chr19:1207927..1207939,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr19:1207927..1207939, -
3.29e-195FFCP PHASE2:Hg19::chr1:2250692..2250695,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr1:2250692..2250695, +
3.29e-195FFCP PHASE2:Hg19::chr17:27188395..27188398,-#_ccf2239d507bb0b2b1ce7b5538a0129fp1@MIR451A
3.29e-195FFCP PHASE2:Hg19::chr16:15616042..15616045,+#_ccf2239d507bb0b2b1ce7b5538a0129f+, p@chr16:15616042..15616045
3.29e-195FFCP PHASE1:Hg19::chr6:10585661..10585670,+#_ccf2239d507bb0b2b1ce7b5538a0129fp26@GCNT2
3.29e-195FFCP PHASE1:Hg19::chr8:63838198..63838201,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr8:63838198..63838201, +
3.29e-195FFCP PHASE2:Hg19::chr17:42343955..42343974,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr17:42343955..42343974, -
3.29e-195FFCP PHASE1:Hg19::chr8:101412217..101412218,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr8:101412217..101412218, +
3.29e-195FFCP PHASE1:Hg19::chr4:82805715..82805717,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:82805715..82805717, +
3.29e-195FFCP PHASE2:Hg19::chr16:67228546..67228549,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr16:67228546..67228549, +
3.29e-195FFCP PHASE2:Hg19::chr6:10585672..10585677,+#_ccf2239d507bb0b2b1ce7b5538a0129fp42@GCNT2
3.29e-195FFCP PHASE1:Hg19::chr1:207823590..207823599,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr1:207823590..207823599, +
3.29e-195FFCP PHASE2:Hg19::chr13:78682773..78682778,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr13:78682773..78682778, +
3.29e-195FFCP PHASE1:Hg19::chr17:27188395..27188398,-#_ccf2239d507bb0b2b1ce7b5538a0129fp1@MIR451A
3.29e-195FFCP PHASE1:Hg19::chr12:75560876..75560881,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr12:75560876..75560881, +
3.29e-195FFCP PHASE1:Hg19::chrX:107332036..107332041,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chrX:107332036..107332041, +
3.29e-195FFCP PHASE2:Hg19::chr10:94679592..94679594,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr10:94679592..94679594, -
3.29e-195FFCP PHASE2:Hg19::chr16:227522..227524,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr16:227522..227524, +
3.29e-195FFCP PHASE1:Hg19::chr21:27203678..27203684,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr21:27203678..27203684, +
3.29e-195FFCP PHASE2:Hg19::chr21:27203678..27203684,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr21:27203678..27203684, +
3.29e-195FFCP PHASE1:Hg19::chr22:30680245..30680254,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr22:30680245..30680254, -
3.29e-195FFCP PHASE1:Hg19::chr11:115492263..115492265,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr11:115492263..115492265, +
3.29e-195FFCP PHASE2:Hg19::chr4:82805715..82805717,+#_ccf2239d507bb0b2b1ce7b5538a0129f+, p@chr4:82805715..82805717
3.29e-195FFCP PHASE2:Hg19::chr3:49726593..49726603,+#_ccf2239d507bb0b2b1ce7b5538a0129fp4@RNF123
3.29e-195FFCP PHASE1:Hg19::chr9:123853258..123853276,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr9:123853258..123853276, -
3.29e-195FFCP PHASE2:Hg19::chr17:42392517..42392522,+#_ccf2239d507bb0b2b1ce7b5538a0129fp17@RUNDC3A
3.29e-195FFCP PHASE1:Hg19::chr7:23205201..23205207,+#_ccf2239d507bb0b2b1ce7b5538a0129fp13@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr9:138852021..138852030,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr9:138852021..138852030, +
3.29e-195FFCP PHASE1:Hg19::chr1:2250692..2250695,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr1:2250692..2250695, +
3.29e-195FFCP PHASE1:Hg19::chr4:175593804..175593809,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:175593804..175593809, +
3.29e-195FFCP PHASE2:Hg19::chr1:25598961..25598966,+#_ccf2239d507bb0b2b1ce7b5538a0129fp5@RHD
3.29e-195FFCP PHASE1:Hg19::chr20:24432163..24432165,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr20:24432163..24432165, +
3.29e-195FFCP PHASE1:Hg19::chr1:25598971..25598977,+#_ccf2239d507bb0b2b1ce7b5538a0129fp4@RHD
3.29e-195FFCP PHASE2:Hg19::chr22:30680245..30680254,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr22:30680245..30680254, -
3.29e-195FFCP PHASE2:Hg19::chr11:57416011..57416016,+#_ccf2239d507bb0b2b1ce7b5538a0129fp9@CLP1
3.29e-195FFCP PHASE2:Hg19::chr8:138915590..138915591,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr8:138915590..138915591, +
3.29e-195FFCP PHASE1:Hg19::chr16:15616042..15616045,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr16:15616042..15616045, +
3.29e-195FFCP PHASE1:Hg19::chr9:45465498..45465501,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr9:45465498..45465501, +
3.29e-195FFCP PHASE1:Hg19::chr17:42366115..42366125,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr17:42366115..42366125, +
3.29e-195FFCP PHASE2:Hg19::chr4:175593804..175593809,+#_ccf2239d507bb0b2b1ce7b5538a0129f+, p@chr4:175593804..175593809
3.29e-195FFCP PHASE1:Hg19::chr4:190941380..190941381,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:190941380..190941381, +
3.29e-195FFCP PHASE2:Hg19::chr6:155472342..155472346,-#_ccf2239d507bb0b2b1ce7b5538a0129f-, p@chr6:155472342..155472346
3.29e-195FFCP PHASE1:Hg19::chr6:10585672..10585677,+#_ccf2239d507bb0b2b1ce7b5538a0129fp42@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr1:95582484..95582492,+#_ccf2239d507bb0b2b1ce7b5538a0129fp10@TMEM56
3.29e-195FFCP PHASE2:Hg19::chr11:115492263..115492265,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr11:115492263..115492265, +
3.29e-195FFCP PHASE1:Hg19::chr11:66676050..66676060,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr11:66676050..66676060, +
3.29e-195FFCP PHASE2:Hg19::chr6:10585684..10585689,+#_ccf2239d507bb0b2b1ce7b5538a0129fp37@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr4:190941380..190941381,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:190941380..190941381, +
3.29e-195FFCP PHASE2:Hg19::chr4:160049078..160049079,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:160049078..160049079, +
3.29e-195FFCP PHASE2:Hg19::chr1:158580993..158580998,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr1:158580993..158580998, -
3.29e-195FFCP PHASE1:Hg19::chr14:96742091..96742094,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr14:96742091..96742094, -
3.29e-195FFCP PHASE2:Hg19::chr2:87816262..87816269,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:87816262..87816269, +
3.29e-195FFCP PHASE1:Hg19::chr15:71406717..71406718,+#_ccf2239d507bb0b2b1ce7b5538a0129f+, p@chr15:71406717..71406718
3.29e-195FFCP PHASE1:Hg19::chr17:42343955..42343974,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr17:42343955..42343974, -
3.29e-195FFCP PHASE2:Hg19::chr1:207823590..207823599,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr1:207823590..207823599, +
3.29e-195FFCP PHASE1:Hg19::chr2:71833597..71833600,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:71833597..71833600, +
3.29e-195FFCP PHASE2:Hg19::chr6:50700492..50700495,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr6:50700492..50700495, +
3.29e-195FFCP PHASE1:Hg19::chr3:49726561..49726577,+#_ccf2239d507bb0b2b1ce7b5538a0129fp3@RNF123
3.29e-195FFCP PHASE1:Hg19::chr1:95582484..95582492,+#_ccf2239d507bb0b2b1ce7b5538a0129fp10@TMEM56
3.29e-195FFCP PHASE2:Hg19::chr1:25598971..25598977,+#_ccf2239d507bb0b2b1ce7b5538a0129fp4@RHD
3.29e-195FFCP PHASE1:Hg19::chr1:25598993..25599007,+#_ccf2239d507bb0b2b1ce7b5538a0129fp1@RHD
3.29e-195FFCP PHASE2:Hg19::chr12:75560876..75560881,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr12:75560876..75560881, +
3.29e-195FFCP PHASE1:Hg19::chr1:220146675..220146678,-#_ccf2239d507bb0b2b1ce7b5538a0129f-, p@chr1:220146675..220146678
3.29e-195FFCP PHASE1:Hg19::chr10:86596455..86596456,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr10:86596455..86596456, +
3.29e-195FFCP PHASE2:Hg19::chr7:23205190..23205198,+#_ccf2239d507bb0b2b1ce7b5538a0129fp10@KLHL7
3.29e-195FFCP PHASE2:Hg19::chr9:45465498..45465501,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr9:45465498..45465501, +
3.29e-195FFCP PHASE1:Hg19::chr1:5543682..5543685,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr1:5543682..5543685, +
3.29e-195FFCP PHASE1:Hg19::chr17:42392517..42392522,+#_ccf2239d507bb0b2b1ce7b5538a0129fp17@RUNDC3A
3.29e-195FFCP PHASE2:Hg19::chrX:107332036..107332041,+#_ccf2239d507bb0b2b1ce7b5538a0129f+, p@chrX:107332036..107332041
3.29e-195FFCP PHASE2:Hg19::chr20:24432163..24432165,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr20:24432163..24432165, +
3.29e-195FFCP PHASE1:Hg19::chr11:57415965..57415973,+#_ccf2239d507bb0b2b1ce7b5538a0129fp5@CLP1
3.29e-195FFCP PHASE1:Hg19::chr11:5247692..5247701,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr11:5247692..5247701, -
3.29e-195FFCP PHASE1:Hg19::chr4:26378984..26378987,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:26378984..26378987, +
3.29e-195FFCP PHASE1:Hg19::chr6:10585684..10585689,+#_ccf2239d507bb0b2b1ce7b5538a0129fp37@GCNT2
3.29e-195FFCP PHASE2:Hg19::chr15:71406717..71406718,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr15:71406717..71406718, +
3.29e-195FFCP PHASE1:Hg19::chr6:50700492..50700495,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr6:50700492..50700495, +
3.29e-195FFCP PHASE1:Hg19::chr16:67228546..67228549,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr16:67228546..67228549, +
3.29e-195FFCP PHASE1:Hg19::chr13:78682773..78682778,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr13:78682773..78682778, +
3.29e-195FFCP PHASE1:Hg19::chr11:5255612..5255613,-#_ccf2239d507bb0b2b1ce7b5538a0129fp10@HBD
3.29e-195FFCP PHASE1:Hg19::chr19:1207927..1207939,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr19:1207927..1207939, -
3.29e-195FFCP PHASE1:Hg19::chr4:160049078..160049079,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr4:160049078..160049079, +
3.29e-195FFCP PHASE2:Hg19::chr12:131245491..131245492,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr12:131245491..131245492, +
3.29e-195FFCP PHASE2:Hg19::chr11:66676050..66676060,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr11:66676050..66676060, +
3.29e-195FFCP PHASE2:Hg19::chr13:23969126..23969130,+#_ccf2239d507bb0b2b1ce7b5538a0129f+, p@chr13:23969126..23969130
3.29e-195FFCP PHASE2:Hg19::chr10:86596455..86596456,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr10:86596455..86596456, +
3.29e-195FFCP PHASE1:Hg19::chr11:29581179..29581180,+#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr11:29581179..29581180, +
3.29e-195FFCP PHASE2:Hg19::chr2:112191654..112191660,-#_ccf2239d507bb0b2b1ce7b5538a0129fp@chr2:112191654..112191660, -
3.29e-195FFCP PHASE1:Hg19::chr3:49726589..49726592,+#_ccf2239d507bb0b2b1ce7b5538a0129fp7@RNF123

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