Personal tools

CL:0000855: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{CL |id=CL:0000855 |name=sensory hair cell |namespace=cell |def="Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocil...")
 
No edit summary
Line 20: Line 20:
|located_in=
|located_in=
|part_of=
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl.owl
|is_obsolete=
|preceded_by=
}}
}}

Revision as of 17:39, 15 June 2012

Name:sensory hair cell
Namespace:cell
Definition:"Hair cell is a mechanoreceptor cell that is sensitive to movement of the hair-like projections (stereocilia and kinocilia) which relay the information centrally in the nervous system." [SANBI:mhl]
Xrefs:
links:
BTO:0004744
Synonyms: "hair cell" BROAD []


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:CL:0000199(mechanoreceptor cell)



Children


is a:CL:0002374 (ear hair cell)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.

Human (Homo sapiens)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)

Mouse (Mus musculus)

  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000855 (sensory hair cell), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
3.07e-86FFCP PHASE2:Mm9::chr4:106770202..106770208,+#_69a436025048d8cd4ef3889620a3674dp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684637..64684654,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684637..64684654,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684637..64684654, +
3.07e-86FFCP PHASE2:Mm9::chr2:12032746..12032751,-#_69a436025048d8cd4ef3889620a3674dp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185389..34185401,+#_69a436025048d8cd4ef3889620a3674dp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr18:66033513..66033517,-#_69a436025048d8cd4ef3889620a3674dp@chr18:66033513..66033517, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185362..34185370,+#_69a436025048d8cd4ef3889620a3674dp10@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr2:142907424..142907448,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE2:Mm9::chr16:55283394..55283400,-#_69a436025048d8cd4ef3889620a3674dp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr13:31171742..31171745,-#_69a436025048d8cd4ef3889620a3674dp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE1:Mm9::chr15:91379135..91379143,-#_69a436025048d8cd4ef3889620a3674dp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE2:Mm9::chr15:97828021..97828028,-#_69a436025048d8cd4ef3889620a3674dp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:64684692..64684697,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE1:Mm9::chr6:64684692..64684697,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684692..64684697, +
3.07e-86FFCP PHASE2:Mm9::chr2:180335744..180335746,+#_69a436025048d8cd4ef3889620a3674dp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr16:55283394..55283400,-#_69a436025048d8cd4ef3889620a3674dp1@Zpld1
3.07e-86FFCP PHASE2:Mm9::chr17:34185378..34185383,+#_69a436025048d8cd4ef3889620a3674dp11@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr10:18246142..18246145,+#_69a436025048d8cd4ef3889620a3674dp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr5:72652671..72652676,+#_69a436025048d8cd4ef3889620a3674dp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE1:Mm9::chr4:106770202..106770208,+#_69a436025048d8cd4ef3889620a3674dp@chr4:106770202..106770208, +
3.07e-86FFCP PHASE1:Mm9::chr11:94371110..94371111,-#_69a436025048d8cd4ef3889620a3674dp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr19:10535924..10535927,-#_69a436025048d8cd4ef3889620a3674dp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185343..34185356,+#_69a436025048d8cd4ef3889620a3674dp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142906965..142906982,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr6:83129695..83129696,+#_69a436025048d8cd4ef3889620a3674dp24@Dctn1
3.07e-86FFCP PHASE1:Mm9::chr9:92087990..92087995,+#_69a436025048d8cd4ef3889620a3674dp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr9:92087990..92087995,+#_69a436025048d8cd4ef3889620a3674dp3@Plscr5
3.07e-86FFCP PHASE2:Mm9::chr17:34185389..34185401,+#_69a436025048d8cd4ef3889620a3674dp8@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr15:97828021..97828028,-#_69a436025048d8cd4ef3889620a3674dp@chr15:97828021..97828028, -
3.07e-86FFCP PHASE2:Mm9::chr6:36966723..36966734,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr11:94371110..94371111,-#_69a436025048d8cd4ef3889620a3674dp@chr11:94371110..94371111, -
3.07e-86FFCP PHASE1:Mm9::chr8:94283075..94283082,+#_69a436025048d8cd4ef3889620a3674dp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr6:83129695..83129696,+#_69a436025048d8cd4ef3889620a3674dp24@Dctn1
3.07e-86FFCP PHASE2:Mm9::chr17:15466888..15466898,-#_69a436025048d8cd4ef3889620a3674dp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE2:Mm9::chr3:127520184..127520191,-#_69a436025048d8cd4ef3889620a3674dp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr2:12032746..12032751,-#_69a436025048d8cd4ef3889620a3674dp@chr2:12032746..12032751, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185362..34185370,+#_69a436025048d8cd4ef3889620a3674dp10@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr2:142907424..142907448,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142907424..142907448, -
3.07e-86FFCP PHASE1:Mm9::chr6:64684505..64684512,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE2:Mm9::chr11:114652018..114652020,+#_69a436025048d8cd4ef3889620a3674dp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:180335744..180335746,+#_69a436025048d8cd4ef3889620a3674dp@chr2:180335744..180335746, +
3.07e-86FFCP PHASE1:Mm9::chr17:15466888..15466898,-#_69a436025048d8cd4ef3889620a3674dp@chr17:15466888..15466898, -
3.07e-86FFCP PHASE1:Mm9::chr5:72652671..72652676,+#_69a436025048d8cd4ef3889620a3674dp@chr5:72652671..72652676, +
3.07e-86FFCP PHASE2:Mm9::chr6:36966993..36966996,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE1:Mm9::chr3:127520184..127520191,-#_69a436025048d8cd4ef3889620a3674dp@chr3:127520184..127520191, -
3.07e-86FFCP PHASE1:Mm9::chr6:36966723..36966734,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966723..36966734, -
3.07e-86FFCP PHASE2:Mm9::chr9:87599703..87599714,-#_69a436025048d8cd4ef3889620a3674dp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE2:Mm9::chr8:94283075..94283082,+#_69a436025048d8cd4ef3889620a3674dp@chr8:94283075..94283082, +
3.07e-86FFCP PHASE2:Mm9::chr6:64684505..64684512,+#_69a436025048d8cd4ef3889620a3674dp@chr6:64684505..64684512, +
3.07e-86FFCP PHASE1:Mm9::chr9:87599703..87599714,-#_69a436025048d8cd4ef3889620a3674dp@chr9:87599703..87599714, -
3.07e-86FFCP PHASE1:Mm9::chr17:34185378..34185383,+#_69a436025048d8cd4ef3889620a3674dp11@Col11a2
3.07e-86FFCP PHASE1:Mm9::chr13:31171742..31171745,-#_69a436025048d8cd4ef3889620a3674dp@chr13:31171742..31171745, -
3.07e-86FFCP PHASE2:Mm9::chr17:34185343..34185356,+#_69a436025048d8cd4ef3889620a3674dp7@Col11a2
3.07e-86FFCP PHASE2:Mm9::chr15:91379135..91379143,-#_69a436025048d8cd4ef3889620a3674dp@chr15:91379135..91379143, -
3.07e-86FFCP PHASE1:Mm9::chr10:18246142..18246145,+#_69a436025048d8cd4ef3889620a3674dp@chr10:18246142..18246145, +
3.07e-86FFCP PHASE2:Mm9::chr19:10535924..10535927,-#_69a436025048d8cd4ef3889620a3674dp@chr19:10535924..10535927, -
3.07e-86FFCP PHASE1:Mm9::chr2:142906965..142906982,-#_69a436025048d8cd4ef3889620a3674dp@chr2:142906965..142906982, -
3.07e-86FFCP PHASE1:Mm9::chr11:114652018..114652020,+#_69a436025048d8cd4ef3889620a3674dp@chr11:114652018..114652020, +
3.07e-86FFCP PHASE1:Mm9::chr2:53464193..53464197,+#_69a436025048d8cd4ef3889620a3674dp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE2:Mm9::chr2:53464193..53464197,+#_69a436025048d8cd4ef3889620a3674dp@chr2:53464193..53464197, +
3.07e-86FFCP PHASE1:Mm9::chr6:36966993..36966996,-#_69a436025048d8cd4ef3889620a3674dp@chr6:36966993..36966996, -
3.07e-86FFCP PHASE2:Mm9::chr18:66033513..66033517,-#_69a436025048d8cd4ef3889620a3674dp@chr18:66033513..66033517, -
2.74e-44FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_3c70b699083a5138fd6e482cca9fa0abp@chr2:170417150..170417155, -
2.74e-44FFCP PHASE2:Mm9::chr18:81314626..81314636,+#_3c70b699083a5138fd6e482cca9fa0abp@chr18:81314626..81314636, +
2.74e-44FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_3c70b699083a5138fd6e482cca9fa0abp@chr15:89215306..89215315, +
2.74e-44FFCP PHASE1:Mm9::chr17:13983160..13983167,+#_3c70b699083a5138fd6e482cca9fa0abp@chr17:13983160..13983167, +
2.74e-44FFCP PHASE2:Mm9::chr17:66272852..66272855,-#_3c70b699083a5138fd6e482cca9fa0abp@chr17:66272852..66272855, -
2.74e-44FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_3c70b699083a5138fd6e482cca9fa0abp@chr5:150945209..150945220, +
2.74e-44FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_3c70b699083a5138fd6e482cca9fa0abp@chrX:154140781..154140788, +
2.74e-44FFCP PHASE1:Mm9::chr1:182528388..182528403,+#_3c70b699083a5138fd6e482cca9fa0abp@chr1:182528388..182528403, +
2.74e-44FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_3c70b699083a5138fd6e482cca9fa0abp@chr3:154459246..154459253, +
2.74e-44FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_3c70b699083a5138fd6e482cca9fa0abp2@Tmprss3
2.74e-44FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_3c70b699083a5138fd6e482cca9fa0abp@chr16:93971357..93971363, -
2.74e-44FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_3c70b699083a5138fd6e482cca9fa0abp@chr17:13983160..13983167, +
2.74e-44FFCP PHASE1:Mm9::chr16:45693840..45693856,-#_3c70b699083a5138fd6e482cca9fa0abp1@Tmprss7
2.74e-44FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_3c70b699083a5138fd6e482cca9fa0abp@chr9:66860888..66860899, +
2.74e-44FFCP PHASE1:Mm9::chr9:92087926..92087938,+#_3c70b699083a5138fd6e482cca9fa0abp2@Plscr5
2.74e-44FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_3c70b699083a5138fd6e482cca9fa0abp2@Gm1322
2.74e-44FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_3c70b699083a5138fd6e482cca9fa0abp@chr12:109905468..109905474, +
2.74e-44FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_3c70b699083a5138fd6e482cca9fa0abp@chr6:113251614..113251623, +
2.74e-44FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_3c70b699083a5138fd6e482cca9fa0abp@chr8:13414266..13414279, +
2.74e-44FFCP PHASE2:Mm9::chr15:65641779..65641790,+#_3c70b699083a5138fd6e482cca9fa0abp@chr15:65641779..65641790, +
2.74e-44FFCP PHASE2:Mm9::chr15:12848147..12848162,+#_3c70b699083a5138fd6e482cca9fa0abp@chr15:12848147..12848162, +
2.74e-44FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_3c70b699083a5138fd6e482cca9fa0abp5@BC030867
2.74e-44FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_3c70b699083a5138fd6e482cca9fa0abp1@Tmc1
2.74e-44FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_3c70b699083a5138fd6e482cca9fa0abp4@Chrna10
2.74e-44FFCP PHASE1:Mm9::chr4:130461150..130461185,+#_3c70b699083a5138fd6e482cca9fa0abp@chr4:130461150..130461185, +
2.74e-44FFCP PHASE2:Mm9::chr2:75320183..75320189,+#_3c70b699083a5138fd6e482cca9fa0abp@chr2:75320183..75320189, +
2.74e-44FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_3c70b699083a5138fd6e482cca9fa0abp@chr2:128881546..128881553, -
2.74e-44FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_3c70b699083a5138fd6e482cca9fa0abp1@Espnl
2.74e-44FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_3c70b699083a5138fd6e482cca9fa0abp2@Slc26a5
2.74e-44FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_3c70b699083a5138fd6e482cca9fa0abp5@Fer1l6
2.74e-44FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_3c70b699083a5138fd6e482cca9fa0abp@chr9:50968647..50968668, -
2.74e-44FFCP PHASE1:Mm9::chr3:154459184..154459195,+#_3c70b699083a5138fd6e482cca9fa0abp@chr3:154459184..154459195, +
2.74e-44FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_3c70b699083a5138fd6e482cca9fa0abp3@Strc
2.74e-44FFCP PHASE1:Mm9::chr17:27252925..27252939,+#_3c70b699083a5138fd6e482cca9fa0abp@chr17:27252925..27252939, +
2.74e-44FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_3c70b699083a5138fd6e482cca9fa0abp@chr1:194818647..194818660, -
2.74e-44FFCP PHASE2:Mm9::chr5:72652660..72652667,+#_3c70b699083a5138fd6e482cca9fa0abp@chr5:72652660..72652667, +
2.74e-44FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_3c70b699083a5138fd6e482cca9fa0abp10@Otof
2.74e-44FFCP PHASE1:Mm9::chr11:11599532..11599539,-#_3c70b699083a5138fd6e482cca9fa0abp@chr11:11599532..11599539, -

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=CL:0000855&oldid=1833721"