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CL:0000864

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Name:tissue-resident macrophage
Namespace:FANTOM
Definition:"A macrophage constitutively resident in a particular tissue under non-inflammatory conditions, and capable of phagocytosing a variety of extracellular particulate material, including immune complexes, microorganisms, and dead cells." [GO_REF:0000031, GOC:ana, PMID:19770654]
Xrefs:
links:

FMA:84642

FMA:84644
Synonyms: "fixed macrophage" EXACT []
"resting histiocyte" EXACT []


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000235(macrophage)
part_of:UBERON:0000479(tissue)



Children


is a:CL:0000878 (central nervous system macrophage),CL:0002476 (bone marrow macrophage)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0000864 (tissue-resident macrophage), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.54e-44FFCP PHASE1:Mm9::chr11:4733080..4733087,-#_516c32b446bc26efc4de3890a61761cep13@Nf2
4.54e-44FFCP PHASE1:Mm9::chr4:136685291..136685295,+#_516c32b446bc26efc4de3890a61761cep@chr4:136685291..136685295, +
4.54e-44FFCP PHASE1:Mm9::chr12:112646729..112646768,+#_516c32b446bc26efc4de3890a61761cep@chr12:112646729..112646768, +
4.54e-44FFCP PHASE1:Mm9::chr6:48989609..48989612,+#_516c32b446bc26efc4de3890a61761cep@chr6:48989609..48989612, +
4.54e-44FFCP PHASE2:Mm9::chr7:31145621..31145622,+#_516c32b446bc26efc4de3890a61761cep@chr7:31145621..31145622, +
4.54e-44FFCP PHASE2:Mm9::chr8:113227136..113227143,+#_516c32b446bc26efc4de3890a61761cep@chr8:113227136..113227143, +
4.54e-44FFCP PHASE2:Mm9::chr13:103497023..103497030,+#_516c32b446bc26efc4de3890a61761cep@chr13:103497023..103497030, +
4.54e-44FFCP PHASE2:Mm9::chr4:136685291..136685295,+#_516c32b446bc26efc4de3890a61761cep@chr4:136685291..136685295, +
4.54e-44FFCP PHASE2:Mm9::chrX:9046562..9046572,-#_516c32b446bc26efc4de3890a61761cep4@Cybb
4.54e-44FFCP PHASE1:Mm9::chr13:13485859..13485864,-#_516c32b446bc26efc4de3890a61761cep4@Gpr137b
4.54e-44FFCP PHASE1:Mm9::chr7:135282667..135282669,+#_516c32b446bc26efc4de3890a61761cep@chr7:135282667..135282669, +
4.54e-44FFCP PHASE2:Mm9::chr12:112646729..112646768,+#_516c32b446bc26efc4de3890a61761cep@chr12:112646729..112646768, +
4.54e-44FFCP PHASE2:Mm9::chr13:13485859..13485864,-#_516c32b446bc26efc4de3890a61761cep4@Gpr137b
4.54e-44FFCP PHASE2:Mm9::chr7:135282667..135282669,+#_516c32b446bc26efc4de3890a61761cep@chr7:135282667..135282669, +
4.54e-44FFCP PHASE1:Mm9::chrX:9046562..9046572,-#_516c32b446bc26efc4de3890a61761cep4@Cybb
4.54e-44FFCP PHASE1:Mm9::chr7:31145621..31145622,+#_516c32b446bc26efc4de3890a61761cep@chr7:31145621..31145622, +
4.54e-44FFCP PHASE1:Mm9::chr8:113227136..113227143,+#_516c32b446bc26efc4de3890a61761cep@chr8:113227136..113227143, +
4.54e-44FFCP PHASE2:Mm9::chr11:4733080..4733087,-#_516c32b446bc26efc4de3890a61761cep13@Nf2
4.54e-44FFCP PHASE2:Mm9::chr6:48989609..48989612,+#_516c32b446bc26efc4de3890a61761cep@chr6:48989609..48989612, +
4.54e-44FFCP PHASE1:Mm9::chr13:103497023..103497030,+#_516c32b446bc26efc4de3890a61761ce+, p@chr13:103497023..103497030
6.75e-44FFCP PHASE1:Mm9::chr1:173164773..173164781,-#_e8b5b151a9dc19c8317f3c7903943577p3@Fcer1g
6.75e-44FFCP PHASE2:Mm9::chr1:173164773..173164781,-#_e8b5b151a9dc19c8317f3c7903943577p3@Fcer1g
1.12e-43FFCP PHASE2:Mm9::chr11:69478859..69478867,-#_0b084ba5b457cac5eedceaaaa57fafa5p@chr11:69478859..69478867, -
1.12e-43FFCP PHASE1:Mm9::chr11:69478859..69478867,-#_0b084ba5b457cac5eedceaaaa57fafa5p@chr11:69478859..69478867, -
1.85e-43FFCP PHASE1:Mm9::chr6:48997958..48997979,-#_5cefccc1a45f489754e6fa429f110341p@chr6:48997958..48997979, -
1.85e-43FFCP PHASE2:Mm9::chr6:48997958..48997979,-#_5cefccc1a45f489754e6fa429f110341p@chr6:48997958..48997979, -
1.93e-39FFCP PHASE2:Mm9::chr11:69479338..69479345,-#_50348d5027c3535b97d29c7a62d0b892p@chr11:69479338..69479345, -
1.93e-39FFCP PHASE1:Mm9::chr11:69479338..69479345,-#_50348d5027c3535b97d29c7a62d0b892p@chr11:69479338..69479345, -
5.95e-39FFCP PHASE1:Mm9::chr6:48997901..48997913,+#_e90322bcbf02696eb58df851b225795fp@chr6:48997901..48997913, +
5.95e-39FFCP PHASE2:Mm9::chr6:48997901..48997913,+#_e90322bcbf02696eb58df851b225795fp@chr6:48997901..48997913, +
5.95e-39FFCP PHASE2:Mm9::chr11:69479077..69479088,-#_e90322bcbf02696eb58df851b225795fp@chr11:69479077..69479088, -
5.95e-39FFCP PHASE1:Mm9::chr11:69479077..69479088,-#_e90322bcbf02696eb58df851b225795fp@chr11:69479077..69479088, -
1.6e-35FFCP PHASE1:Mm9::chr14:31973915..31973932,+#_8e9bbd81ca2ac5e301dc7339626b715ap@chr14:31973915..31973932, +
1.6e-35FFCP PHASE2:Mm9::chr14:31973915..31973932,+#_8e9bbd81ca2ac5e301dc7339626b715ap@chr14:31973915..31973932, +
1.97e-35FFCP PHASE2:Mm9::chr6:48997305..48997322,+#_ef1c66aab8f3db59a8528f0d17a5e6cfp@chr6:48997305..48997322, +
1.97e-35FFCP PHASE1:Mm9::chr6:48997305..48997322,+#_ef1c66aab8f3db59a8528f0d17a5e6cfp@chr6:48997305..48997322, +
2.41e-35FFCP PHASE2:Mm9::chr5:138670967..138670977,+#_502ba895206a5345d5e380ca9a83c793p3@BC055004, p3@LOC100504821
2.41e-35FFCP PHASE1:Mm9::chr5:138670967..138670977,+#_502ba895206a5345d5e380ca9a83c793p3@BC055004, p3@LOC100504821
2.95e-35FFCP PHASE1:Mm9::chr6:48993990..48994006,+#_33669c1dbe56ef52d77522fede5e0fc5p@chr6:48993990..48994006, +
2.95e-35FFCP PHASE2:Mm9::chr6:48993990..48994006,+#_33669c1dbe56ef52d77522fede5e0fc5p@chr6:48993990..48994006, +
1.23e-33FFCP PHASE2:Mm9::chr6:122805870..122805874,-#_cdc842e9e3f257387f5765fa7f1a5a3ap@chr6:122805870..122805874, -
1.23e-33FFCP PHASE1:Mm9::chr6:122805870..122805874,-#_cdc842e9e3f257387f5765fa7f1a5a3ap@chr6:122805870..122805874, -
2.04e-33FFCP PHASE1:Mm9::chr10:116715054..116715061,-#_1299bb4e3e98e76824dd6f4fe069aa21p@chr10:116715054..116715061, -
2.04e-33FFCP PHASE2:Mm9::chr10:116715054..116715061,-#_1299bb4e3e98e76824dd6f4fe069aa21p@chr10:116715054..116715061, -
2.62e-33FFCP PHASE2:Mm9::chr11:69479320..69479327,-#_87bf0cbd8afd127b2cae4f88afced72ep@chr11:69479320..69479327, -
2.62e-33FFCP PHASE1:Mm9::chr11:69479320..69479327,-#_87bf0cbd8afd127b2cae4f88afced72ep@chr11:69479320..69479327, -
2.62e-33FFCP PHASE2:Mm9::chr8:74103228..74103246,+#_87bf0cbd8afd127b2cae4f88afced72ep16@Slc27a1
2.62e-33FFCP PHASE1:Mm9::chr8:74103228..74103246,+#_87bf0cbd8afd127b2cae4f88afced72ep16@Slc27a1
7.1e-33FFCP PHASE2:Mm9::chr11:102297834..102297848,+#_c66dd78f250a7727c0326afaa9bcf9f5p@chr11:102297834..102297848, +
7.1e-33FFCP PHASE1:Mm9::chr11:102297834..102297848,+#_c66dd78f250a7727c0326afaa9bcf9f5p@chr11:102297834..102297848, +
9.22e-33FFCP PHASE2:Mm9::chr6:48997291..48997298,+#_30dc16176864b81253c5a4b1209bd0bbp@chr6:48997291..48997298, +
9.22e-33FFCP PHASE1:Mm9::chr6:48995364..48995370,+#_30dc16176864b81253c5a4b1209bd0bbp@chr6:48995364..48995370, +
9.22e-33FFCP PHASE1:Mm9::chr4:136452258..136452269,-#_30dc16176864b81253c5a4b1209bd0bbp@chr4:136452258..136452269, -
9.22e-33FFCP PHASE2:Mm9::chr6:48995364..48995370,+#_30dc16176864b81253c5a4b1209bd0bbp@chr6:48995364..48995370, +
9.22e-33FFCP PHASE1:Mm9::chr6:48997291..48997298,+#_30dc16176864b81253c5a4b1209bd0bbp@chr6:48997291..48997298, +
9.22e-33FFCP PHASE2:Mm9::chr4:136452258..136452269,-#_30dc16176864b81253c5a4b1209bd0bb-, p@chr4:136452258..136452269
2.16e-32FFCP PHASE1:Mm9::chr4:136446198..136446209,-#_d42cd31ca7fe044e7aa884662a713a24p@chr4:136446198..136446209, -
2.16e-32FFCP PHASE2:Mm9::chr4:136446198..136446209,-#_d42cd31ca7fe044e7aa884662a713a24p@chr4:136446198..136446209, -
2.6e-32FFCP PHASE1:Mm9::chr6:48995408..48995424,+#_d57268a49ea20a077356ed0d77f37a3fp@chr6:48995408..48995424, +
2.6e-32FFCP PHASE1:Mm9::chr6:48997398..48997412,+#_d57268a49ea20a077356ed0d77f37a3fp@chr6:48997398..48997412, +
2.6e-32FFCP PHASE2:Mm9::chr6:48997398..48997412,+#_d57268a49ea20a077356ed0d77f37a3fp@chr6:48997398..48997412, +
2.6e-32FFCP PHASE2:Mm9::chr6:48995408..48995424,+#_d57268a49ea20a077356ed0d77f37a3fp@chr6:48995408..48995424, +
3.13e-32FFCP PHASE1:Mm9::chr14:31973221..31973260,-#_3a22919d926d0496f4b4c05d4f9dcc27p@chr14:31973221..31973260, -
3.13e-32FFCP PHASE2:Mm9::chr14:31973221..31973260,-#_3a22919d926d0496f4b4c05d4f9dcc27p@chr14:31973221..31973260, -
5.28e-30FFCP PHASE1:Mm9::chr10:116714486..116714508,-#_3800462b08dfd9682fdf1e65ef9facb2p@chr10:116714486..116714508, -
5.28e-30FFCP PHASE2:Mm9::chr10:116714486..116714508,-#_3800462b08dfd9682fdf1e65ef9facb2p@chr10:116714486..116714508, -
5.63e-30FFCP PHASE1:Mm9::chr7:128207732..128207737,-#_4df89c165265332f918c1b0b4d66ae47p@chr7:128207732..128207737, -
5.63e-30FFCP PHASE1:Mm9::chr1:173159807..173159816,-#_4df89c165265332f918c1b0b4d66ae47p@chr1:173159807..173159816, -
5.63e-30FFCP PHASE1:Mm9::chr19:12539392..12539396,+#_4df89c165265332f918c1b0b4d66ae47p@chr19:12539392..12539396, +
5.63e-30FFCP PHASE2:Mm9::chr7:128207732..128207737,-#_4df89c165265332f918c1b0b4d66ae47p@chr7:128207732..128207737, -
5.63e-30FFCP PHASE1:Mm9::chr17:25273605..25273609,+#_4df89c165265332f918c1b0b4d66ae47p6@Clcn7
5.63e-30FFCP PHASE1:Mm9::chr10:75403311..75403323,-#_4df89c165265332f918c1b0b4d66ae47p3@ENSMUST00000059658, p3@uc007fts.1
5.63e-30FFCP PHASE2:Mm9::chr6:122528009..122528020,-#_4df89c165265332f918c1b0b4d66ae47p@chr6:122528009..122528020, -
5.63e-30FFCP PHASE1:Mm9::chr6:122528009..122528020,-#_4df89c165265332f918c1b0b4d66ae47-, p@chr6:122528009..122528020
5.63e-30FFCP PHASE1:Mm9::chr3:95358394..95358404,+#_4df89c165265332f918c1b0b4d66ae47p@chr3:95358394..95358404, +
5.63e-30FFCP PHASE2:Mm9::chr1:173159807..173159816,-#_4df89c165265332f918c1b0b4d66ae47p@chr1:173159807..173159816, -
5.63e-30FFCP PHASE2:Mm9::chr19:12539392..12539396,+#_4df89c165265332f918c1b0b4d66ae47p@chr19:12539392..12539396, +
5.63e-30FFCP PHASE1:Mm9::chr3:151394747..151394780,-#_4df89c165265332f918c1b0b4d66ae47p@chr3:151394747..151394780, -
5.63e-30FFCP PHASE2:Mm9::chr13:76099911..76099914,+#_4df89c165265332f918c1b0b4d66ae47p@chr13:76099911..76099914, +
5.63e-30FFCP PHASE2:Mm9::chrX:9046606..9046630,-#_4df89c165265332f918c1b0b4d66ae47p3@Cybb
5.63e-30FFCP PHASE2:Mm9::chr3:151394747..151394780,-#_4df89c165265332f918c1b0b4d66ae47p@chr3:151394747..151394780, -
5.63e-30FFCP PHASE2:Mm9::chr3:95358394..95358404,+#_4df89c165265332f918c1b0b4d66ae47p@chr3:95358394..95358404, +
5.63e-30FFCP PHASE2:Mm9::chr10:75403311..75403323,-#_4df89c165265332f918c1b0b4d66ae47p3@ENSMUST00000059658, p3@uc007fts.1
5.63e-30FFCP PHASE1:Mm9::chr13:76099911..76099914,+#_4df89c165265332f918c1b0b4d66ae47p@chr13:76099911..76099914, +
5.63e-30FFCP PHASE1:Mm9::chrX:9046606..9046630,-#_4df89c165265332f918c1b0b4d66ae47p3@Cybb
5.63e-30FFCP PHASE2:Mm9::chr17:25273605..25273609,+#_4df89c165265332f918c1b0b4d66ae47p6@Clcn7
7.42e-30FFCP PHASE1:Mm9::chr6:48997360..48997394,+#_0ed0255a2c7b2f725876be351a059fabp@chr6:48997360..48997394, +
7.42e-30FFCP PHASE2:Mm9::chr6:48997360..48997394,+#_0ed0255a2c7b2f725876be351a059fabp@chr6:48997360..48997394, +
1.1e-29FFCP PHASE1:Mm9::chr16:32400811..32400820,+#_b968842627caedafaed943da79c87bf1p4@Tm4sf19
1.1e-29FFCP PHASE2:Mm9::chr10:127033266..127033304,+#_b968842627caedafaed943da79c87bf1p1@ENSMUST00000124182
1.1e-29FFCP PHASE1:Mm9::chr10:127033266..127033304,+#_b968842627caedafaed943da79c87bf1p1@ENSMUST00000124182
1.1e-29FFCP PHASE2:Mm9::chr16:32400811..32400820,+#_b968842627caedafaed943da79c87bf1p4@Tm4sf19
6.0e-29FFCP PHASE1:Mm9::chr11:4733117..4733126,-#_c3fcfbc87fef057276f5c2728689a257p11@Nf2
6.0e-29FFCP PHASE2:Mm9::chr11:4733117..4733126,-#_c3fcfbc87fef057276f5c2728689a257p11@Nf2
2.2e-28FFCP PHASE1:Mm9::chr6:48992765..48992800,+#_9076c1ab092faae518db55be57a04dcep@chr6:48992765..48992800, +
2.2e-28FFCP PHASE2:Mm9::chr6:48992765..48992800,+#_9076c1ab092faae518db55be57a04dcep@chr6:48992765..48992800, +
2.2e-28FFCP PHASE1:Mm9::chr6:48992877..48992890,-#_9076c1ab092faae518db55be57a04dce-, p@chr6:48992877..48992890
2.2e-28FFCP PHASE2:Mm9::chr6:48992877..48992890,-#_9076c1ab092faae518db55be57a04dcep@chr6:48992877..48992890, -
8.9e-28FFCP PHASE2:Mm9::chr10:116714720..116714745,-#_9f00dde13d5322cef6db20786a87a955p@chr10:116714720..116714745, -
8.9e-28FFCP PHASE1:Mm9::chr10:116714720..116714745,-#_9f00dde13d5322cef6db20786a87a955p@chr10:116714720..116714745, -