CL:0002222
From FANTOM5_SSTAR
Name: | vertebrate lens cell | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "A cell comprising the transparent, biconvex body separating the posterior chamber and vitreous body, and constituting part of the refracting mechanism of the mammalian eye." [GOC:tfm, ISBN:0721662544] | ||
Xrefs: |
| ||
Created by: | tmeehan | ||
Creation date: | 2010-09-07T10:38:03Z |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000066(epithelial cell),CL:0000306(crystallin accumulating cell),CL:0002371(somatic cell) |
---|---|
part_of: | UBERON:0000965(lens of camera-type eye) |
Children
is a: | CL:0002224 (lens epithelial cell) |
---|
Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Mouse (Mus musculus)
- 10647-109A8 (lens epithelial cell line:SRA 01/04)
- 11529-119I8 (Lens Epithelial Cells, donor1)
- 11609-120I7 (Lens Epithelial Cells, donor2)
- 11690-122I7 (Lens Epithelial Cells, donor3)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002222 (vertebrate lens cell), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.41e-88 | FFCP PHASE1:Hg19::chr22:25595823..25595826,+#_62525fd9efbc11171f3ce554eaac3b37 | p1@CRYBB3 |
1.41e-88 | FFCP PHASE2:Hg19::chr22:25595823..25595826,+#_62525fd9efbc11171f3ce554eaac3b37 | p1@CRYBB3 |
3.32e-74 | FFCP PHASE1:Hg19::chr22:25615600..25615611,+#_853714fb28d1c53b7501497cd8e1ad1e | p1@CRYBB2 |
3.32e-74 | FFCP PHASE2:Hg19::chr22:25615600..25615611,+#_853714fb28d1c53b7501497cd8e1ad1e | p1@CRYBB2 |
5.48e-74 | FFCP PHASE2:Hg19::chr19:51891222..51891233,-#_c29434cfd2fb817d51655baf61a2df0a | p1@LIM2 |
5.48e-74 | FFCP PHASE1:Hg19::chr19:51891222..51891233,-#_c29434cfd2fb817d51655baf61a2df0a | p1@LIM2 |
3.8e-56 | FFCP PHASE1:Hg19::chr22:27017921..27017928,+#_98df0c1d7164d031b01ab5e851941bdc | p1@CRYBA4 |
3.8e-56 | FFCP PHASE2:Hg19::chr22:27017921..27017928,+#_98df0c1d7164d031b01ab5e851941bdc | p1@CRYBA4 |
3.1e-50 | FFCP PHASE1:Hg19::chr20:61204240..61204241,+#_1b3f1a09c2ace582bf7bc9f441c21a68 | p@chr20:61204240..61204241, + |
3.1e-50 | FFCP PHASE2:Hg19::chr13:104778247..104778293,+#_1b3f1a09c2ace582bf7bc9f441c21a68 | p@chr13:104778247..104778293, + |
3.1e-50 | FFCP PHASE2:Hg19::chr20:61204240..61204241,+#_1b3f1a09c2ace582bf7bc9f441c21a68 | p@chr20:61204240..61204241, + |
3.1e-50 | FFCP PHASE1:Hg19::chr13:104778247..104778293,+#_1b3f1a09c2ace582bf7bc9f441c21a68 | p@chr13:104778247..104778293, + |
5.14e-50 | FFCP PHASE2:Hg19::chr14:37642016..37642022,-#_a4397da7f5d422e790ff492d6c59bdce | p7@SLC25A21 |
5.14e-50 | FFCP PHASE2:Hg19::chr21:44592820..44592840,-#_a4397da7f5d422e790ff492d6c59bdce | p2@CU686889 |
5.14e-50 | FFCP PHASE1:Hg19::chr21:44592820..44592840,-#_a4397da7f5d422e790ff492d6c59bdce | p2@CU686889 |
5.14e-50 | FFCP PHASE1:Hg19::chr14:37642016..37642022,-#_a4397da7f5d422e790ff492d6c59bdce | p7@SLC25A21 |
6.6e-50 | FFCP PHASE1:Hg19::chr21:44589339..44589372,-#_14d6a5d582228d4791d597aeb4a6f8f4 | p@chr21:44589339..44589372, - |
6.6e-50 | FFCP PHASE2:Hg19::chr21:44592842..44592867,-#_14d6a5d582228d4791d597aeb4a6f8f4 | p1@CU686889 |
6.6e-50 | FFCP PHASE2:Hg19::chr12:132475501..132475504,+#_14d6a5d582228d4791d597aeb4a6f8f4 | p@chr12:132475501..132475504, + |
6.6e-50 | FFCP PHASE1:Hg19::chr12:132475501..132475504,+#_14d6a5d582228d4791d597aeb4a6f8f4 | p@chr12:132475501..132475504, + |
6.6e-50 | FFCP PHASE2:Hg19::chr21:44589339..44589372,-#_14d6a5d582228d4791d597aeb4a6f8f4 | p@chr21:44589339..44589372, - |
6.6e-50 | FFCP PHASE1:Hg19::chr21:44592842..44592867,-#_14d6a5d582228d4791d597aeb4a6f8f4 | p1@CU686889 |
6.27e-44 | FFCP PHASE1:Hg19::chr11:31827535..31827565,-#_9d8bda1a242333c9473d2696560537ee | p11@PAX6 |
6.27e-44 | FFCP PHASE2:Hg19::chr11:31827535..31827565,-#_9d8bda1a242333c9473d2696560537ee | p11@PAX6 |
1.92e-41 | FFCP PHASE1:Hg19::chr3:186262166..186262170,-#_acc6c5dd78ac300aad523af6bea5fbd0 | p1@CRYGS |
1.92e-41 | FFCP PHASE2:Hg19::chr3:186262166..186262170,-#_acc6c5dd78ac300aad523af6bea5fbd0 | p1@CRYGS |
4.94e-40 | FFCP PHASE1:Hg19::chr5:112173525..112173532,+#_c7ae718a71e62502e6ccd61a8c64fd44 | p@chr5:112173525..112173532, + |
4.94e-40 | FFCP PHASE2:Hg19::chr5:112173525..112173532,+#_c7ae718a71e62502e6ccd61a8c64fd44 | p@chr5:112173525..112173532, + |
1.62e-37 | FFCP PHASE2:Hg19::chr1:29586692..29586705,+#_b2b4823a2fc2b395f558f61113b8d576 | p7@PTPRU |
1.62e-37 | FFCP PHASE1:Hg19::chr1:29586692..29586705,+#_b2b4823a2fc2b395f558f61113b8d576 | p7@PTPRU |
2.1e-35 | FFCP PHASE2:Hg19::chr14:60975644..60975673,+#_75030ec8fa9bdd9976e4f5839e61730b | p3@SIX6 |
2.1e-35 | FFCP PHASE1:Hg19::chr14:60975644..60975673,+#_75030ec8fa9bdd9976e4f5839e61730b | p3@SIX6 |
6.73e-35 | FFCP PHASE2:Hg19::chr14:60975871..60975880,+#_71c218ffe719484b5124129e7650c4a8 | p4@SIX6 |
6.73e-35 | FFCP PHASE1:Hg19::chr14:60975871..60975880,+#_71c218ffe719484b5124129e7650c4a8 | p4@SIX6 |
5.06e-34 | FFCP PHASE1:Hg19::chr11:31667372..31667383,-#_244931b2dc4ba9c62e62792062f1b36e | p@chr11:31667372..31667383, - |
5.06e-34 | FFCP PHASE2:Hg19::chr11:31667372..31667383,-#_244931b2dc4ba9c62e62792062f1b36e | p@chr11:31667372..31667383, - |
8.36e-34 | FFCP PHASE1:Hg19::chr19:1470631..1470648,-#_f4c6e3f23468956be84aad8d230c7555 | p@chr19:1470631..1470648, - |
8.36e-34 | FFCP PHASE2:Hg19::chr19:1470631..1470648,-#_f4c6e3f23468956be84aad8d230c7555 | p@chr19:1470631..1470648, - |
5.55e-33 | FFCP PHASE2:Hg19::chr21:44589135..44589151,+#_4aa0dd26f84d8b29ecbff14c067b76df | p1@CRYAA |
5.55e-33 | FFCP PHASE1:Hg19::chr21:44589135..44589151,+#_4aa0dd26f84d8b29ecbff14c067b76df | p1@CRYAA |
9.55e-33 | FFCP PHASE2:Hg19::chr17:27573875..27573878,+#_a340bac2244af98fa7baec405ac0dd67 | p1@CRYBA1 |
9.55e-33 | FFCP PHASE1:Hg19::chr17:27573875..27573878,+#_a340bac2244af98fa7baec405ac0dd67 | p1@CRYBA1 |
2.74e-29 | FFCP PHASE2:Hg19::chr2:45168589..45168601,-#_9d735e246c8f66e92a89fd0409a28cf6 | p2@ENST00000456467 |
2.74e-29 | FFCP PHASE1:Hg19::chr2:45168589..45168601,-#_9d735e246c8f66e92a89fd0409a28cf6 | p2@ENST00000456467 |
3.65e-29 | FFCP PHASE2:Hg19::chr7:107883678..107883689,-#_389f029fec4f1b2873f712ecb943a58b | p13@NRCAM |
3.65e-29 | FFCP PHASE1:Hg19::chr7:107883678..107883689,-#_389f029fec4f1b2873f712ecb943a58b | p13@NRCAM |
7.46e-29 | FFCP PHASE1:Hg19::chr13:114202163..114202178,+#_4a2bf3cf8e3f58ca46c2298e8f3dc2d6 | p@chr13:114202163..114202178, + |
7.46e-29 | FFCP PHASE2:Hg19::chr13:114202163..114202178,+#_4a2bf3cf8e3f58ca46c2298e8f3dc2d6 | p@chr13:114202163..114202178, + |
1.36e-28 | FFCP PHASE1:Hg19::chr3:173116225..173116242,+#_e81d975bd536f53137979ea64c6c376b | p10@NLGN1 |
1.36e-28 | FFCP PHASE2:Hg19::chr3:173116225..173116242,+#_e81d975bd536f53137979ea64c6c376b | p10@NLGN1 |
2.64e-27 | FFCP PHASE1:Hg19::chr2:45169233..45169244,+#_251ac97212e5e5888893ba8727b1f547 | p10@SIX3 |
2.64e-27 | FFCP PHASE2:Hg19::chr2:45169233..45169244,+#_251ac97212e5e5888893ba8727b1f547 | p10@SIX3 |
8.39e-27 | FFCP PHASE2:Hg19::chr14:60975858..60975869,+#_2cd5d3bd88681bb61fceed450e62617b | p2@SIX6 |
8.39e-27 | FFCP PHASE1:Hg19::chr14:60975858..60975869,+#_2cd5d3bd88681bb61fceed450e62617b | p2@SIX6 |
5.56e-26 | FFCP PHASE1:Hg19::chr19:40920692..40920700,-#_a97d2146e948221d187449ba227eca4c | p@chr19:40920692..40920700, - |
5.56e-26 | FFCP PHASE1:Hg19::chr20:35861148..35861151,+#_a97d2146e948221d187449ba227eca4c | p@chr20:35861148..35861151, + |
5.56e-26 | FFCP PHASE2:Hg19::chr1:147374915..147374932,+#_a97d2146e948221d187449ba227eca4c | p1@GJA8 |
5.56e-26 | FFCP PHASE2:Hg19::chr20:35861148..35861151,+#_a97d2146e948221d187449ba227eca4c | p@chr20:35861148..35861151, + |
5.56e-26 | FFCP PHASE2:Hg19::chr19:40920692..40920700,-#_a97d2146e948221d187449ba227eca4c | p@chr19:40920692..40920700, - |
5.56e-26 | FFCP PHASE1:Hg19::chr3:150690809..150690822,-#_a97d2146e948221d187449ba227eca4c | p3@CLRN1 |
5.56e-26 | FFCP PHASE2:Hg19::chr9:75848662..75848671,-#_a97d2146e948221d187449ba227eca4c | p@chr9:75848662..75848671, - |
5.56e-26 | FFCP PHASE2:Hg19::chrX:43587410..43587413,+#_a97d2146e948221d187449ba227eca4c | p@chrX:43587410..43587413, + |
5.56e-26 | FFCP PHASE2:Hg19::chr3:150690809..150690822,-#_a97d2146e948221d187449ba227eca4c | p3@CLRN1 |
5.56e-26 | FFCP PHASE1:Hg19::chr9:75848662..75848671,-#_a97d2146e948221d187449ba227eca4c | p@chr9:75848662..75848671, - |
5.56e-26 | FFCP PHASE1:Hg19::chr1:147374915..147374932,+#_a97d2146e948221d187449ba227eca4c | p1@GJA8 |
5.56e-26 | FFCP PHASE1:Hg19::chrX:43587410..43587413,+#_a97d2146e948221d187449ba227eca4c | +, p@chrX:43587410..43587413 |
7.14e-26 | FFCP PHASE1:Hg19::chr7:123198284..123198329,-#_671f4df912aa5319e038348dd8788347 | p3@NDUFA5 |
7.14e-26 | FFCP PHASE1:Hg19::chr9:100057272..100057276,+#_671f4df912aa5319e038348dd8788347 | p@chr9:100057272..100057276, + |
7.14e-26 | FFCP PHASE2:Hg19::chr16:85617064..85617073,-#_671f4df912aa5319e038348dd8788347 | p@chr16:85617064..85617073, - |
7.14e-26 | FFCP PHASE2:Hg19::chr13:44875179..44875188,-#_671f4df912aa5319e038348dd8788347 | p@chr13:44875179..44875188, - |
7.14e-26 | FFCP PHASE1:Hg19::chr4:140656282..140656285,-#_671f4df912aa5319e038348dd8788347 | p@chr4:140656282..140656285, - |
7.14e-26 | FFCP PHASE2:Hg19::chr20:33903184..33903189,-#_671f4df912aa5319e038348dd8788347 | p11@UQCC |
7.14e-26 | FFCP PHASE2:Hg19::chr7:123198284..123198329,-#_671f4df912aa5319e038348dd8788347 | p3@NDUFA5 |
7.14e-26 | FFCP PHASE2:Hg19::chr2:45154282..45154288,-#_671f4df912aa5319e038348dd8788347 | p@chr2:45154282..45154288, - |
7.14e-26 | FFCP PHASE2:Hg19::chr19:41727698..41727705,+#_671f4df912aa5319e038348dd8788347 | p@chr19:41727698..41727705, + |
7.14e-26 | FFCP PHASE1:Hg19::chr1:115873480..115873484,+#_671f4df912aa5319e038348dd8788347 | p@chr1:115873480..115873484, + |
7.14e-26 | FFCP PHASE2:Hg19::chr13:72440726..72440736,-#_671f4df912aa5319e038348dd8788347 | p19@DACH1 |
7.14e-26 | FFCP PHASE1:Hg19::chr21:44592750..44592758,-#_671f4df912aa5319e038348dd8788347 | p4@CU686889 |
7.14e-26 | FFCP PHASE2:Hg19::chr19:17137781..17137792,-#_671f4df912aa5319e038348dd8788347 | p6@CPAMD8 |
7.14e-26 | FFCP PHASE1:Hg19::chr2:45154282..45154288,-#_671f4df912aa5319e038348dd8788347 | p@chr2:45154282..45154288, - |
7.14e-26 | FFCP PHASE1:Hg19::chr5:124468141..124468176,-#_671f4df912aa5319e038348dd8788347 | p@chr5:124468141..124468176, - |
7.14e-26 | FFCP PHASE1:Hg19::chr5:45038620..45038622,+#_671f4df912aa5319e038348dd8788347 | p@chr5:45038620..45038622, + |
7.14e-26 | FFCP PHASE1:Hg19::chr1:45769711..45769721,-#_671f4df912aa5319e038348dd8788347 | p@chr1:45769711..45769721, - |
7.14e-26 | FFCP PHASE1:Hg19::chr12:56848437..56848442,-#_671f4df912aa5319e038348dd8788347 | p1@MIP |
7.14e-26 | FFCP PHASE2:Hg19::chr2:10538258..10538282,+#_671f4df912aa5319e038348dd8788347 | p@chr2:10538258..10538282, + |
7.14e-26 | FFCP PHASE2:Hg19::chr21:44592512..44592521,+#_671f4df912aa5319e038348dd8788347 | +, p@chr21:44592512..44592521 |
7.14e-26 | FFCP PHASE1:Hg19::chr13:44875179..44875188,-#_671f4df912aa5319e038348dd8788347 | -, p@chr13:44875179..44875188 |
7.14e-26 | FFCP PHASE1:Hg19::chr21:44592358..44592365,+#_671f4df912aa5319e038348dd8788347 | p@chr21:44592358..44592365, + |
7.14e-26 | FFCP PHASE2:Hg19::chr10:73406056..73406065,+#_671f4df912aa5319e038348dd8788347 | p@chr10:73406056..73406065, + |
7.14e-26 | FFCP PHASE1:Hg19::chr20:33903184..33903189,-#_671f4df912aa5319e038348dd8788347 | p11@UQCC |
7.14e-26 | FFCP PHASE1:Hg19::chr16:17563573..17563582,+#_671f4df912aa5319e038348dd8788347 | p@chr16:17563573..17563582, + |
7.14e-26 | FFCP PHASE2:Hg19::chr1:115873480..115873484,+#_671f4df912aa5319e038348dd8788347 | p@chr1:115873480..115873484, + |
7.14e-26 | FFCP PHASE2:Hg19::chr1:86064794..86064797,+#_671f4df912aa5319e038348dd8788347 | p1@ENST00000426794 |
7.14e-26 | FFCP PHASE2:Hg19::chr4:140656282..140656285,-#_671f4df912aa5319e038348dd8788347 | -, p@chr4:140656282..140656285 |
7.14e-26 | FFCP PHASE1:Hg19::chr21:44592788..44592807,+#_671f4df912aa5319e038348dd8788347 | p@chr21:44592788..44592807, + |
7.14e-26 | FFCP PHASE2:Hg19::chr16:17563573..17563582,+#_671f4df912aa5319e038348dd8788347 | p@chr16:17563573..17563582, + |
7.14e-26 | FFCP PHASE1:Hg19::chr2:693025..693036,+#_671f4df912aa5319e038348dd8788347 | p@chr2:693025..693036, + |
7.14e-26 | FFCP PHASE2:Hg19::chr9:100057272..100057276,+#_671f4df912aa5319e038348dd8788347 | p@chr9:100057272..100057276, + |
7.14e-26 | FFCP PHASE1:Hg19::chr2:10538258..10538282,+#_671f4df912aa5319e038348dd8788347 | p@chr2:10538258..10538282, + |
7.14e-26 | FFCP PHASE1:Hg19::chr1:86064794..86064797,+#_671f4df912aa5319e038348dd8788347 | p1@ENST00000426794 |