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Difference between revisions of "CL:0002251"

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Line 13: Line 13:
 
|located_in=
 
|located_in=
 
|name=epithelial cell of alimentary canal
 
|name=epithelial cell of alimentary canal
|namespace=cell
+
|namespace=FANTOM
 
|obo_creation_date=2010-09-08T09:26:53Z
 
|obo_creation_date=2010-09-08T09:26:53Z
 
|part_of=UBERON:0001555
 
|part_of=UBERON:0001555

Latest revision as of 07:41, 12 September 2014

Name:epithelial cell of alimentary canal
Namespace:FANTOM
Definition:"An epithelial cell of the musculomembranous digestive tube extending from the mouth to the anus." [GOC:tfm, ISBN:0721662544]
Created by:tmeehan
Creation date:2010-09-08T09:26:53Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0002076(endo-epithelial cell)
part_of:UBERON:0001555(digestive tract)



Children


is a:CL:0000682 (M cell of gut),CL:0002166 (epithelial cell of Malassez),CL:0002170 (keratinized cell of the oral mucosa),CL:0002178 (epithelial cell of stomach),CL:0002252 (epithelial cell of esophagus),CL:0002563 (intestinal epithelial cell),CL:0002621 (gingival epithelial cell),CL:1001596 (salivary gland glandular cell)
derives from:FF:0100790 (pharyngeal cancer cell line sample),FF:0102211 (oral squamous cell carcinoma cell line sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002251 (epithelial cell of alimentary canal), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
4.97e-77FFCP PHASE1:Mm9::chr8:122335239..122335244,+#_3a9ebee0556296f778917fc9cd4dfcf9p@chr8:122335239..122335244, +
4.97e-77FFCP PHASE2:Mm9::chr8:122335239..122335244,+#_3a9ebee0556296f778917fc9cd4dfcf9p@chr8:122335239..122335244, +
1.86e-71FFCP PHASE1:Mm9::chr17:57201412..57201418,-#_5d02c5c8aa69521d457f0d58a0ff29b4p@chr17:57201412..57201418, -
1.86e-71FFCP PHASE2:Mm9::chr17:57201412..57201418,-#_5d02c5c8aa69521d457f0d58a0ff29b4p@chr17:57201412..57201418, -
1.41e-68FFCP PHASE1:Mm9::chr4:155434167..155434177,+#_246a2bb74098783258fc3993abba0a1cp@chr4:155434167..155434177, +
1.41e-68FFCP PHASE2:Mm9::chr4:155434167..155434177,+#_246a2bb74098783258fc3993abba0a1cp@chr4:155434167..155434177, +
1.7e-67FFCP PHASE2:Mm9::chr8:64192378..64192389,+#_f26a716760003c7f800e870b6a6e30fdp@chr8:64192378..64192389, +
1.7e-67FFCP PHASE1:Mm9::chr8:64192378..64192389,+#_f26a716760003c7f800e870b6a6e30fdp@chr8:64192378..64192389, +
3.55e-65FFCP PHASE2:Mm9::chr3:122215917..122215967,-#_b3d941adc66253b176faef24dc04ca4ep@chr3:122215917..122215967, -
3.55e-65FFCP PHASE1:Mm9::chr3:122215917..122215967,-#_b3d941adc66253b176faef24dc04ca4ep@chr3:122215917..122215967, -
7.03e-65FFCP PHASE1:Mm9::chr2:143738263..143738267,+#_f09c207864714499e3e319391f8c76c5+, p@chr2:143738263..143738267
7.03e-65FFCP PHASE2:Mm9::chr2:143738263..143738267,+#_f09c207864714499e3e319391f8c76c5p@chr2:143738263..143738267, +
2.43e-61FFCP PHASE1:Mm9::chr5:135465906..135465912,+#_a0c04cb8f39c5e6a841464b526d935fcp@chr5:135465906..135465912, +
2.43e-61FFCP PHASE2:Mm9::chr5:135465906..135465912,+#_a0c04cb8f39c5e6a841464b526d935fcp@chr5:135465906..135465912, +
5.84e-61FFCP PHASE2:Mm9::chr7:4101973..4101978,-#_060aecfe905d7a00355849df980ffa6cp4@Leng9
5.84e-61FFCP PHASE1:Mm9::chr7:4101973..4101978,-#_060aecfe905d7a00355849df980ffa6cp4@Leng9
1.29e-60FFCP PHASE1:Mm9::chr7:4101821..4101832,-#_5bd62426d8b559d69a07f664a203c12fp5@Leng9
1.29e-60FFCP PHASE2:Mm9::chr7:4101821..4101832,-#_5bd62426d8b559d69a07f664a203c12fp5@Leng9
5.24e-58FFCP PHASE2:Mm9::chr12:86771033..86771037,-#_2bd04d55fb31ab8494cc70b51d84b91bp@chr12:86771033..86771037, -
5.24e-58FFCP PHASE1:Mm9::chr12:86771033..86771037,-#_2bd04d55fb31ab8494cc70b51d84b91bp@chr12:86771033..86771037, -
6.35e-57FFCP PHASE1:Mm9::chr5:145119593..145119596,+#_2a9ce5bd45b9947bc72db8d2be5ab83ap@chr5:145119593..145119596, +
6.35e-57FFCP PHASE2:Mm9::chr5:145119593..145119596,+#_2a9ce5bd45b9947bc72db8d2be5ab83ap@chr5:145119593..145119596, +
8.86e-57FFCP PHASE1:Mm9::chr13:49066571..49066574,-#_4f03b4768131b90941d66160fcca9d85p@chr13:49066571..49066574, -
8.86e-57FFCP PHASE2:Mm9::chr13:49066571..49066574,-#_4f03b4768131b90941d66160fcca9d85p@chr13:49066571..49066574, -
1.46e-56FFCP PHASE2:Mm9::chr11:96797681..96797709,-#_26a90e2028d475db2244826dc5778abdp@chr11:96797681..96797709, -
1.46e-56FFCP PHASE1:Mm9::chr11:96797681..96797709,-#_26a90e2028d475db2244826dc5778abdp@chr11:96797681..96797709, -
2.19e-56FFCP PHASE2:Mm9::chr18:36576247..36576252,-#_2a3c7895fb51207223985eb4a3cdfc26p@chr18:36576247..36576252, -
2.19e-56FFCP PHASE1:Mm9::chr18:36576247..36576252,-#_2a3c7895fb51207223985eb4a3cdfc26p@chr18:36576247..36576252, -
5.47e-56FFCP PHASE1:Mm9::chr9:66888939..66888949,+#_51b116bc23c22c7c9dce2ed70cb709e6p@chr9:66888939..66888949, +
5.47e-56FFCP PHASE2:Mm9::chr9:66888939..66888949,+#_51b116bc23c22c7c9dce2ed70cb709e6p@chr9:66888939..66888949, +
6.45e-56FFCP PHASE2:Mm9::chr17:46693370..46693378,+#_3645da7113330ba5e5b36700c464f5b6p@chr17:46693370..46693378, +
6.45e-56FFCP PHASE1:Mm9::chr17:46693370..46693378,+#_3645da7113330ba5e5b36700c464f5b6p@chr17:46693370..46693378, +
1.93e-53FFCP PHASE2:Mm9::chr7:52317191..52317193,+#_380eaa359cac613b23ec468af994f76bp@chr7:52317191..52317193, +
1.93e-53FFCP PHASE1:Mm9::chr7:52317191..52317193,+#_380eaa359cac613b23ec468af994f76bp@chr7:52317191..52317193, +
2.55e-53FFCP PHASE1:Mm9::chr5:135442713..135442733,+#_332b4e3d9494ece360e762e2df53615bp@chr5:135442713..135442733, +
2.55e-53FFCP PHASE2:Mm9::chr5:135442713..135442733,+#_332b4e3d9494ece360e762e2df53615bp@chr5:135442713..135442733, +
5.3e-53FFCP PHASE2:Mm9::chr2:38781010..38781017,+#_26e06edb5ab79d651312768d83740430p@chr2:38781010..38781017, +
5.3e-53FFCP PHASE1:Mm9::chr2:38781010..38781017,+#_26e06edb5ab79d651312768d83740430p@chr2:38781010..38781017, +
3.46e-52FFCP PHASE2:Mm9::chr10:80565428..80565433,+#_b1778979f87b23e85b38f9cf494d639fp@chr10:80565428..80565433, +
3.46e-52FFCP PHASE1:Mm9::chr10:80565428..80565433,+#_b1778979f87b23e85b38f9cf494d639fp@chr10:80565428..80565433, +
7.4e-52FFCP PHASE1:Mm9::chr11:35759012..35759018,+#_dce7fcfe662a63012c60b3e39f192fb5p@chr11:35759012..35759018, +
7.4e-52FFCP PHASE2:Mm9::chr11:35759012..35759018,+#_dce7fcfe662a63012c60b3e39f192fb5p@chr11:35759012..35759018, +
1.0e-51FFCP PHASE2:Mm9::chr18:66636209..66636215,-#_c482f06dc2514759290098b243507e81p@chr18:66636209..66636215, -
1.0e-51FFCP PHASE1:Mm9::chr18:66636209..66636215,-#_c482f06dc2514759290098b243507e81p@chr18:66636209..66636215, -
1.17e-51FFCP PHASE2:Mm9::chr16:78268076..78268083,-#_7cc88e135be484e96145e33649845d89p@chr16:78268076..78268083, -
1.17e-51FFCP PHASE1:Mm9::chr16:78268076..78268083,-#_7cc88e135be484e96145e33649845d89p@chr16:78268076..78268083, -
3.47e-50FFCP PHASE2:Mm9::chr16:30055801..30055806,+#_36f505cdc1229077edb4ae42937fddc3p@chr16:30055801..30055806, +
3.47e-50FFCP PHASE1:Mm9::chr16:30055801..30055806,+#_36f505cdc1229077edb4ae42937fddc3+, p@chr16:30055801..30055806
5.12e-50FFCP PHASE2:Mm9::chr7:19814309..19814320,+#_25049529acb9f90fc94af16a89ac4ab5p@chr7:19814309..19814320, +
5.12e-50FFCP PHASE1:Mm9::chr7:19814309..19814320,+#_25049529acb9f90fc94af16a89ac4ab5p@chr7:19814309..19814320, +
7.55e-50FFCP PHASE1:Mm9::chr16:91548532..91548555,-#_3ab727e27d8a1741e54e06327746e96cp@chr16:91548532..91548555, -
7.55e-50FFCP PHASE2:Mm9::chr16:91548532..91548555,-#_3ab727e27d8a1741e54e06327746e96cp@chr16:91548532..91548555, -
3.13e-49FFCP PHASE2:Mm9::chr15:77670701..77670706,+#_d4ad94c65ccaac812906da414ae60bb0p@chr15:77670701..77670706, +
3.13e-49FFCP PHASE1:Mm9::chr15:77670701..77670706,+#_d4ad94c65ccaac812906da414ae60bb0p@chr15:77670701..77670706, +
1.47e-48FFCP PHASE2:Mm9::chr3:126314780..126314810,-#_3d40ab8965de1f99e36a92967a0911d3p@chr3:126314780..126314810, -
1.47e-48FFCP PHASE2:Mm9::chr5:32270354..32270364,-#_3d40ab8965de1f99e36a92967a0911d3p@chr5:32270354..32270364, -
1.47e-48FFCP PHASE1:Mm9::chr5:32270354..32270364,-#_3d40ab8965de1f99e36a92967a0911d3p@chr5:32270354..32270364, -
1.47e-48FFCP PHASE1:Mm9::chr3:126314780..126314810,-#_3d40ab8965de1f99e36a92967a0911d3-, p@chr3:126314780..126314810
3.07e-48FFCP PHASE2:Mm9::chr12:111682896..111682907,+#_9f6b91c7868010c70d9468ef46e0f698p@chr12:111682896..111682907, +
3.07e-48FFCP PHASE1:Mm9::chr12:111682896..111682907,+#_9f6b91c7868010c70d9468ef46e0f698p@chr12:111682896..111682907, +
4.07e-48FFCP PHASE2:Mm9::chr2:84491058..84491102,+#_6a99a86d71fd23bac62663434875c9c3p@chr2:84491058..84491102, +
4.07e-48FFCP PHASE1:Mm9::chr2:84491058..84491102,+#_6a99a86d71fd23bac62663434875c9c3p@chr2:84491058..84491102, +
4.98e-48FFCP PHASE2:Mm9::chr1:90912298..90912303,+#_0bfb4d7aa4c6a40ee5acec2b41c0b6e7p3@1700067G17Rik
4.98e-48FFCP PHASE1:Mm9::chr1:90912298..90912303,+#_0bfb4d7aa4c6a40ee5acec2b41c0b6e7p3@1700067G17Rik
6.85e-48FFCP PHASE1:Mm9::chr15:100568814..100568821,-#_20b498d739e3743dfc1e129176606680p@chr15:100568814..100568821, -
6.85e-48FFCP PHASE2:Mm9::chr15:100568814..100568821,-#_20b498d739e3743dfc1e129176606680p@chr15:100568814..100568821, -
1.78e-47FFCP PHASE2:Mm9::chr2:167904248..167904260,+#_08711854095697db2c3867cf3f2da76ap@chr2:167904248..167904260, +
1.78e-47FFCP PHASE1:Mm9::chr2:167904248..167904260,+#_08711854095697db2c3867cf3f2da76ap@chr2:167904248..167904260, +
2.02e-47FFCP PHASE1:Mm9::chr10:19251573..19251584,+#_a129cc08708f03773b86d1b813b33ac5p@chr10:19251573..19251584, +
2.02e-47FFCP PHASE2:Mm9::chr10:19251573..19251584,+#_a129cc08708f03773b86d1b813b33ac5p@chr10:19251573..19251584, +
3.29e-47FFCP PHASE1:Mm9::chr9:66888952..66888964,+#_ad3d7d2431db55459e4ecffe337751ffp@chr9:66888952..66888964, +
3.29e-47FFCP PHASE2:Mm9::chr9:66888952..66888964,+#_ad3d7d2431db55459e4ecffe337751ffp@chr9:66888952..66888964, +
1.12e-46FFCP PHASE1:Mm9::chr1:36331417..36331462,+#_fb365a36271a21acab30798e8cc91c94p@chr1:36331417..36331462, +
1.12e-46FFCP PHASE2:Mm9::chr1:36331417..36331462,+#_fb365a36271a21acab30798e8cc91c94p@chr1:36331417..36331462, +
3.4e-45FFCP PHASE2:Mm9::chr8:126155114..126155118,+#_3471c72cbb73825a93c726bec47b02e4p1@uc009nwl.1
3.4e-45FFCP PHASE1:Mm9::chr15:83305098..83305104,+#_3471c72cbb73825a93c726bec47b02e4p@chr15:83305098..83305104, +
3.4e-45FFCP PHASE2:Mm9::chr15:83305098..83305104,+#_3471c72cbb73825a93c726bec47b02e4p@chr15:83305098..83305104, +
3.4e-45FFCP PHASE1:Mm9::chr8:126155114..126155118,+#_3471c72cbb73825a93c726bec47b02e4p1@uc009nwl.1
6.51e-45FFCP PHASE1:Mm9::chr7:20335303..20335317,+#_6b1b7be6f13ee6bbd85cdab1e2cd6c77p@chr7:20335303..20335317, +
6.51e-45FFCP PHASE2:Mm9::chr7:20335303..20335317,+#_6b1b7be6f13ee6bbd85cdab1e2cd6c77p@chr7:20335303..20335317, +
7.31e-45FFCP PHASE1:Mm9::chr5:135442349..135442362,-#_687a3da78d67f45fde1fc8a1b9016343p@chr5:135442349..135442362, -
7.31e-45FFCP PHASE2:Mm9::chr5:135442349..135442362,-#_687a3da78d67f45fde1fc8a1b9016343p@chr5:135442349..135442362, -
1.85e-44FFCP PHASE1:Mm9::chr5:145015979..145015991,-#_d338bafdcc739a75447c873db7a6a063p@chr5:145015979..145015991, -
1.85e-44FFCP PHASE1:Mm9::chr4:62163210..62163216,-#_d338bafdcc739a75447c873db7a6a063p3@Hdhd3
1.85e-44FFCP PHASE2:Mm9::chr4:62163210..62163216,-#_d338bafdcc739a75447c873db7a6a063p3@Hdhd3
1.85e-44FFCP PHASE2:Mm9::chr5:145015979..145015991,-#_d338bafdcc739a75447c873db7a6a063p@chr5:145015979..145015991, -
1.86e-44FFCP PHASE2:Mm9::chrX:96331285..96331289,-#_4d9a0af4057598fcba2b038a0b8e5cd4p@chrX:96331285..96331289, -
1.86e-44FFCP PHASE1:Mm9::chrX:96331285..96331289,-#_4d9a0af4057598fcba2b038a0b8e5cd4p@chrX:96331285..96331289, -
5.06e-44FFCP PHASE1:Mm9::chr7:29382208..29382215,+#_08ae6e7844fea770eec41cd23921a99ep@chr7:29382208..29382215, +
5.06e-44FFCP PHASE2:Mm9::chr7:29382208..29382215,+#_08ae6e7844fea770eec41cd23921a99ep@chr7:29382208..29382215, +
7.11e-44FFCP PHASE2:Mm9::chr14:73507116..73507118,+#_381f7735ddc0dd916fcb83aaf7dd76a4p@chr14:73507116..73507118, +
7.11e-44FFCP PHASE1:Mm9::chr14:73507116..73507118,+#_381f7735ddc0dd916fcb83aaf7dd76a4p@chr14:73507116..73507118, +
9.98e-44FFCP PHASE2:Mm9::chr11:69778735..69778745,-#_9fb29cced1c247a7382a9a573d716cd8p@chr11:69778735..69778745, -
9.98e-44FFCP PHASE2:Mm9::chr19:6264408..6264418,-#_9fb29cced1c247a7382a9a573d716cd8p@chr19:6264408..6264418, -
9.98e-44FFCP PHASE1:Mm9::chr11:69778735..69778745,-#_9fb29cced1c247a7382a9a573d716cd8p@chr11:69778735..69778745, -
9.98e-44FFCP PHASE1:Mm9::chr19:6264408..6264418,-#_9fb29cced1c247a7382a9a573d716cd8p@chr19:6264408..6264418, -
1.18e-43FFCP PHASE1:Mm9::chr5:99756112..99756132,-#_b824502792b609f5e7e928042d60862dp@chr5:99756112..99756132, -
1.18e-43FFCP PHASE2:Mm9::chr5:99756112..99756132,-#_b824502792b609f5e7e928042d60862dp@chr5:99756112..99756132, -
1.21e-43FFCP PHASE2:Mm9::chr4:133369317..133369320,+#_f64fbd11bbccd5b81173bd8e9cf53908p@chr4:133369317..133369320, +
1.21e-43FFCP PHASE1:Mm9::chr4:133369317..133369320,+#_f64fbd11bbccd5b81173bd8e9cf53908p@chr4:133369317..133369320, +