CL:0002557: Difference between revisions
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{{CL | {{CL | ||
| | |alt_id= | ||
|comment= | |comment= | ||
|created_by=tmeehan | |created_by=tmeehan | ||
| | |def="A fibroblast of pulmonary artery." [GOC:tfm] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=CL:0002557 | |||
|is_a=CL:0000057 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=fibroblast of pulmonary artery | ||
|namespace=FANTOM | |||
|obo_creation_date=2011-02-28T05:22:27Z | |||
|part_of=UBERON:0002012 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/cl.owl | ||
| | |subset= | ||
| | |synonym= | ||
|union_of= | |||
|xref= | |||
}} | }} | ||
Latest revision as of 16:44, 12 September 2014
| Name: | fibroblast of pulmonary artery |
|---|---|
| Namespace: | FANTOM |
| Definition: | "A fibroblast of pulmonary artery." [GOC:tfm] |
| Created by: | tmeehan |
| Creation date: | 2011-02-28T05:22:27Z |
Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | CL:0000057(fibroblast) |
|---|---|
| part_of: | UBERON:0002012(pulmonary artery) |
Children
| derives from: | FF:0000068 (human fibroblast of pulmonary artery sample) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
Mouse (Mus musculus)
- 11250-116E8 (Fibroblast - Pulmonary Artery, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002557 (fibroblast of pulmonary artery), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 5.42e-195 | FFCP PHASE2:Hg19::chr4:70707713..70707716,-#_b6cbaba74135b03188a80eba3db5b773 | p@chr4:70707713..70707716, - |
| 5.42e-195 | FFCP PHASE1:Hg19::chr4:70707713..70707716,-#_b6cbaba74135b03188a80eba3db5b773 | p@chr4:70707713..70707716, - |
| 9.37e-99 | FFCP PHASE2:Hg19::chr4:70707556..70707558,-#_5ab6dec18ecfe3f220fd2be67e097b66 | p@chr4:70707556..70707558, - |
| 9.37e-99 | FFCP PHASE1:Hg19::chr4:70707556..70707558,-#_5ab6dec18ecfe3f220fd2be67e097b66 | p@chr4:70707556..70707558, - |
| 1.23e-66 | FFCP PHASE1:Hg19::chr4:70707608..70707615,-#_726aeaf66efd98f984736bd2b6269ee1 | p@chr4:70707608..70707615, - |
| 1.23e-66 | FFCP PHASE2:Hg19::chr4:70707608..70707615,-#_726aeaf66efd98f984736bd2b6269ee1 | p@chr4:70707608..70707615, - |
| 2.39e-66 | FFCP PHASE2:Hg19::chr4:70690584..70690589,+#_e49a72b1fd1c9dedb4633782485bba79 | p@chr4:70690584..70690589, + |
| 2.39e-66 | FFCP PHASE1:Hg19::chr3:156258392..156258395,-#_e49a72b1fd1c9dedb4633782485bba79 | p@chr3:156258392..156258395, - |
| 2.39e-66 | FFCP PHASE1:Hg19::chr4:70690584..70690589,+#_e49a72b1fd1c9dedb4633782485bba79 | p@chr4:70690584..70690589, + |
| 2.39e-66 | FFCP PHASE2:Hg19::chr3:156258392..156258395,-#_e49a72b1fd1c9dedb4633782485bba79 | p@chr3:156258392..156258395, - |
| 4.66e-66 | FFCP PHASE2:Hg19::chr13:38136724..38136726,+#_847e80753dbb368b0583ea3da0057329 | p@chr13:38136724..38136726, + |
| 4.66e-66 | FFCP PHASE1:Hg19::chr13:38136724..38136726,+#_847e80753dbb368b0583ea3da0057329 | p@chr13:38136724..38136726, + |
| 3.3e-40 | FFCP PHASE2:Hg19::chr14:61929766..61929777,+#_415d5fa0ba765f4ed09b3a56946ee0ed | p39@PRKCH |
| 3.3e-40 | FFCP PHASE1:Hg19::chr14:61929766..61929777,+#_415d5fa0ba765f4ed09b3a56946ee0ed | p39@PRKCH |
| 5.05e-34 | FFCP PHASE2:Hg19::chr3:42515138..42515150,-#_d205f2c19cd23be963afbf95d8b1d940 | p@chr3:42515138..42515150, - |
| 5.05e-34 | FFCP PHASE2:Hg19::chr14:61929802..61929817,+#_d205f2c19cd23be963afbf95d8b1d940 | p35@PRKCH |
| 5.05e-34 | FFCP PHASE1:Hg19::chr3:42515138..42515150,-#_d205f2c19cd23be963afbf95d8b1d940 | p@chr3:42515138..42515150, - |
| 5.05e-34 | FFCP PHASE1:Hg19::chr14:61929802..61929817,+#_d205f2c19cd23be963afbf95d8b1d940 | p35@PRKCH |
| 1.26e-25 | FFCP PHASE1:Hg19::chr18:37550533..37550548,+#_d326ecf33653f667a1219df55a519067 | p@chr18:37550533..37550548, + |
| 1.26e-25 | FFCP PHASE2:Hg19::chr18:37550533..37550548,+#_d326ecf33653f667a1219df55a519067 | p@chr18:37550533..37550548, + |
| 4.1e-23 | FFCP PHASE1:Hg19::chr14:61929948..61929975,+#_20a72d188db006b046befcd5a70aeea6 | p20@PRKCH |
| 4.1e-23 | FFCP PHASE2:Hg19::chr14:61929948..61929975,+#_20a72d188db006b046befcd5a70aeea6 | p20@PRKCH |
| 7.72e-21 | FFCP PHASE2:Hg19::chr1:20407255..20407264,+#_9a6d3b0e8f6683ae93bb67e236fa9f98 | p@chr1:20407255..20407264, + |
| 7.72e-21 | FFCP PHASE1:Hg19::chr1:20407255..20407264,+#_9a6d3b0e8f6683ae93bb67e236fa9f98 | p@chr1:20407255..20407264, + |
| 9.43e-21 | FFCP PHASE1:Hg19::chr8:55013984..55013996,-#_6ef0da65d6142edf7e258c5cc9a9bbb6 | p6@LYPLA1 |
| 9.43e-21 | FFCP PHASE2:Hg19::chr8:55013984..55013996,-#_6ef0da65d6142edf7e258c5cc9a9bbb6 | p6@LYPLA1 |
| 3.25e-19 | FFCP PHASE1:Hg19::chr2:216720351..216720357,+#_f0057375bff91d9112d9807a5b46137d | p@chr2:216720351..216720357, + |
| 3.25e-19 | FFCP PHASE2:Hg19::chr2:216720351..216720357,+#_f0057375bff91d9112d9807a5b46137d | p@chr2:216720351..216720357, + |
| 3.91e-19 | FFCP PHASE1:Hg19::chr18:10979606..10979617,-#_d734c0a8e4c8f3097d5721a1ecf64409 | p@chr18:10979606..10979617, - |
| 3.91e-19 | FFCP PHASE2:Hg19::chr18:10979606..10979617,-#_d734c0a8e4c8f3097d5721a1ecf64409 | p@chr18:10979606..10979617, - |
| 5.26e-18 | FFCP PHASE2:Hg19::chr1:147245435..147245444,-#_e4e0c1241b2d4f80d57ea6f0b0462c2a | p8@GJA5 |
| 5.26e-18 | FFCP PHASE1:Hg19::chr1:147245435..147245444,-#_e4e0c1241b2d4f80d57ea6f0b0462c2a | p8@GJA5 |
| 1.03e-17 | FFCP PHASE1:Hg19::chr1:147245407..147245417,-#_9968e4bd549806aa7753fc239a7929b9 | p5@GJA5 |
| 1.03e-17 | FFCP PHASE2:Hg19::chr1:147245407..147245417,-#_9968e4bd549806aa7753fc239a7929b9 | p5@GJA5 |
| 2.63e-16 | FFCP PHASE2:Hg19::chr19:16213636..16213660,+#_a956722079fb041338f00449849f131e | p@chr19:16213636..16213660, + |
| 2.63e-16 | FFCP PHASE1:Hg19::chr19:16213636..16213660,+#_a956722079fb041338f00449849f131e | p@chr19:16213636..16213660, + |
| 5.56e-16 | FFCP PHASE1:Hg19::chr4:70707689..70707711,-#_31d2fe00336183eff2f906424edf8ae8 | p@chr4:70707689..70707711, - |
| 5.56e-16 | FFCP PHASE2:Hg19::chr4:70707689..70707711,-#_31d2fe00336183eff2f906424edf8ae8 | p@chr4:70707689..70707711, - |
| 2.11e-14 | FFCP PHASE2:Hg19::chr7:81146338..81146341,-#_7629e888bfdae27f4c32300eb8373a0b | p@chr7:81146338..81146341, - |
| 2.11e-14 | FFCP PHASE1:Hg19::chr7:81146338..81146341,-#_7629e888bfdae27f4c32300eb8373a0b | p@chr7:81146338..81146341, - |
| 8.58e-14 | FFCP PHASE2:Hg19::chr20:30347712..30347751,+#_71dc0a2077c16aa60df413adbcf1865f | p5@TPX2 |
| 8.58e-14 | FFCP PHASE1:Hg19::chr20:30347712..30347751,+#_71dc0a2077c16aa60df413adbcf1865f | p5@TPX2 |
| 7.68e-13 | FFCP PHASE2:Hg19::chr7:100777096..100777106,-#_91bb297c27dabe195482e50e7ffc958d | p@chr7:100777096..100777106, - |
| 7.68e-13 | FFCP PHASE1:Hg19::chr7:100777096..100777106,-#_91bb297c27dabe195482e50e7ffc958d | p@chr7:100777096..100777106, - |
| 8.64e-13 | FFCP PHASE1:Hg19::chr1:198203826..198203841,+#_505e88f56bddd4460c68b21908d7373f | p@chr1:198203826..198203841, + |
| 8.64e-13 | FFCP PHASE2:Hg19::chr1:198203826..198203841,+#_505e88f56bddd4460c68b21908d7373f | p@chr1:198203826..198203841, + |
| 1.25e-12 | FFCP PHASE2:Hg19::chr1:147245485..147245494,-#_800a16b62a4ee1a67e3b6fc2aaf72f6d | p6@GJA5 |
| 1.25e-12 | FFCP PHASE1:Hg19::chr1:147245485..147245494,-#_800a16b62a4ee1a67e3b6fc2aaf72f6d | p6@GJA5 |
| 1.75e-12 | FFCP PHASE2:Hg19::chr1:147245422..147245431,-#_4300d8309b97248943f838faebb46623 | p7@GJA5 |
| 1.75e-12 | FFCP PHASE1:Hg19::chr1:147245422..147245431,-#_4300d8309b97248943f838faebb46623 | p7@GJA5 |
| 4.31e-12 | FFCP PHASE1:Hg19::chr14:34034235..34034251,+#_c79538905f2e936b2d0b357c09be4a06 | p@chr14:34034235..34034251, + |
| 4.31e-12 | FFCP PHASE2:Hg19::chr14:34034235..34034251,+#_c79538905f2e936b2d0b357c09be4a06 | p@chr14:34034235..34034251, + |
| 4.81e-12 | FFCP PHASE2:Hg19::chr9:6248469..6248472,+#_b12ca45f6f4baa7e2d7b47fc6fff8f47 | p@chr9:6248469..6248472, + |
| 4.81e-12 | FFCP PHASE1:Hg19::chr9:6248469..6248472,+#_b12ca45f6f4baa7e2d7b47fc6fff8f47 | p@chr9:6248469..6248472, + |
| 5.05e-12 | FFCP PHASE1:Hg19::chrX:86773106..86773119,+#_1b8531dfd6812a4072afe9a81056d4c9 | p5@KLHL4 |
| 5.05e-12 | FFCP PHASE2:Hg19::chrX:86773106..86773119,+#_1b8531dfd6812a4072afe9a81056d4c9 | p5@KLHL4 |
| 1.07e-11 | FFCP PHASE1:Hg19::chr3:149086808..149086812,+#_60afe8f3e65daf2f304b70aad7bb600c | p@chr3:149086808..149086812, + |
| 1.07e-11 | FFCP PHASE2:Hg19::chr3:149086808..149086812,+#_60afe8f3e65daf2f304b70aad7bb600c | p@chr3:149086808..149086812, + |
| 1.31e-11 | FFCP PHASE1:Hg19::chr2:129503997..129504017,-#_c8e2add163f50f17cecc876dced14e19 | p@chr2:129503997..129504017, - |
| 1.31e-11 | FFCP PHASE2:Hg19::chr2:129503997..129504017,-#_c8e2add163f50f17cecc876dced14e19 | p@chr2:129503997..129504017, - |
| 1.63e-11 | FFCP PHASE1:Hg19::chr2:208118999..208119017,-#_4d98db57dd5d4f257dd746df24c8c917 | p@chr2:208118999..208119017, - |
| 1.63e-11 | FFCP PHASE2:Hg19::chr2:208118999..208119017,-#_4d98db57dd5d4f257dd746df24c8c917 | p@chr2:208118999..208119017, - |
| 1.81e-11 | FFCP PHASE2:Hg19::chr9:73216831..73216844,+#_3d68102db06271f77343e4785bc3a1e3 | p@chr9:73216831..73216844, + |
| 1.81e-11 | FFCP PHASE1:Hg19::chr9:73216831..73216844,+#_3d68102db06271f77343e4785bc3a1e3 | p@chr9:73216831..73216844, + |
| 1.1e-10 | FFCP PHASE2:Hg19::chr18:53169326..53169330,-#_4b6b4aec1eb26aa36d439f1d9cbb45e1 | p@chr18:53169326..53169330, - |
| 1.1e-10 | FFCP PHASE1:Hg19::chr18:53169326..53169330,-#_4b6b4aec1eb26aa36d439f1d9cbb45e1 | p@chr18:53169326..53169330, - |
| 1.33e-10 | FFCP PHASE1:Hg19::chr22:24237405..24237410,-#_46eab2e507ed43d1963384822920b085 | p@chr22:24237405..24237410, - |
| 1.33e-10 | FFCP PHASE2:Hg19::chr22:24237405..24237410,-#_46eab2e507ed43d1963384822920b085 | p@chr22:24237405..24237410, - |
| 2.08e-10 | FFCP PHASE2:Hg19::chr22:36623359..36623360,-#_51b2e145acf1a03d6c3d1e2d8475c3cb | p@chr22:36623359..36623360, - |
| 2.08e-10 | FFCP PHASE1:Hg19::chr22:36623359..36623360,-#_51b2e145acf1a03d6c3d1e2d8475c3cb | p@chr22:36623359..36623360, - |
| 3.61e-10 | FFCP PHASE2:Hg19::chr5:167278055..167278068,+#_41dd35b352f1d9b29d1b51eeaab361c6 | p@chr5:167278055..167278068, + |
| 3.61e-10 | FFCP PHASE2:Hg19::chr2:18479067..18479081,+#_41dd35b352f1d9b29d1b51eeaab361c6 | p@chr2:18479067..18479081, + |
| 3.61e-10 | FFCP PHASE1:Hg19::chr5:167278055..167278068,+#_41dd35b352f1d9b29d1b51eeaab361c6 | p@chr5:167278055..167278068, + |
| 3.61e-10 | FFCP PHASE1:Hg19::chr2:18479067..18479081,+#_41dd35b352f1d9b29d1b51eeaab361c6 | p@chr2:18479067..18479081, + |
| 5.79e-10 | FFCP PHASE1:Hg19::chr13:38154792..38154807,-#_48242718e8729a15bc32d4ea987aee87 | p10@POSTN |
| 5.79e-10 | FFCP PHASE2:Hg19::chr13:38154792..38154807,-#_48242718e8729a15bc32d4ea987aee87 | p10@POSTN |
| 9.7e-10 | FFCP PHASE2:Hg19::chr1:173174580..173174592,-#_34d77f022fdf6e0c127da69d2e0875f4 | p8@TNFSF4 |
| 9.7e-10 | FFCP PHASE1:Hg19::chr1:173174580..173174592,-#_34d77f022fdf6e0c127da69d2e0875f4 | p8@TNFSF4 |
| 2.08e-9 | FFCP PHASE1:Hg19::chr14:62037287..62037307,+#_59a9d4378a74d6229ecfed7908c22986 | p1@ENST00000556569 |
| 2.08e-9 | FFCP PHASE1:Hg19::chr1:163045575..163045587,+#_59a9d4378a74d6229ecfed7908c22986 | p5@RGS4 |
| 2.08e-9 | FFCP PHASE2:Hg19::chr14:62037287..62037307,+#_59a9d4378a74d6229ecfed7908c22986 | p1@ENST00000556569 |
| 2.08e-9 | FFCP PHASE2:Hg19::chr1:163045575..163045587,+#_59a9d4378a74d6229ecfed7908c22986 | p5@RGS4 |
| 3.31e-9 | FFCP PHASE1:Hg19::chr18:28621487..28621504,+#_ce9851d4c750688c52b4efb710474e51 | p@chr18:28621487..28621504, + |
| 3.31e-9 | FFCP PHASE2:Hg19::chr18:28621487..28621504,+#_ce9851d4c750688c52b4efb710474e51 | p@chr18:28621487..28621504, + |
| 4.87e-9 | FFCP PHASE1:Hg19::chr13:110802649..110802660,-#_191455ed1b62dd04125ae544bd2cdf73 | p12@COL4A1 |
| 4.87e-9 | FFCP PHASE2:Hg19::chr13:110802649..110802660,-#_191455ed1b62dd04125ae544bd2cdf73 | p12@COL4A1 |
| 1.22e-8 | FFCP PHASE2:Hg19::chr3:171178683..171178696,+#_3484db615e46ba4378db8192d5fc41eb | p@chr3:171178683..171178696, + |
| 1.22e-8 | FFCP PHASE1:Hg19::chr3:171178683..171178696,+#_3484db615e46ba4378db8192d5fc41eb | p@chr3:171178683..171178696, + |
| 1.71e-8 | FFCP PHASE1:Hg19::chr8:123706338..123706351,-#_64e5a1bc01308f92498a655d62999203 | p1@ENST00000521608 |
| 1.71e-8 | FFCP PHASE2:Hg19::chr8:123706338..123706351,-#_64e5a1bc01308f92498a655d62999203 | p1@ENST00000521608 |
| 1.75e-8 | FFCP PHASE1:Hg19::chr12:49521567..49521570,+#_3f8f3c8ab6b9348d4bf02ac2adc1e99d | p1@ENST00000552893 |
| 1.75e-8 | FFCP PHASE2:Hg19::chr12:49521567..49521570,+#_3f8f3c8ab6b9348d4bf02ac2adc1e99d | p1@ENST00000552893 |
| 2.29e-8 | FFCP PHASE2:Hg19::chr4:70591874..70591902,-#_5639c557f95c8a2dead0a6610cf09792 | p@chr4:70591874..70591902, - |
| 2.29e-8 | FFCP PHASE2:Hg19::chr17:48437950..48437958,+#_5639c557f95c8a2dead0a6610cf09792 | p@chr17:48437950..48437958, + |
| 2.29e-8 | FFCP PHASE1:Hg19::chr4:70591874..70591902,-#_5639c557f95c8a2dead0a6610cf09792 | p@chr4:70591874..70591902, - |
| 2.29e-8 | FFCP PHASE1:Hg19::chr17:48437950..48437958,+#_5639c557f95c8a2dead0a6610cf09792 | p@chr17:48437950..48437958, + |
| 2.33e-8 | FFCP PHASE1:Hg19::chr19:17529120..17529123,-#_496ac05e3a6323dbee33f6c944533d2d | p1@ENST00000526892 |
| 2.33e-8 | FFCP PHASE2:Hg19::chr19:17529120..17529123,-#_496ac05e3a6323dbee33f6c944533d2d | p1@ENST00000526892 |
| 2.46e-8 | FFCP PHASE1:Hg19::chr2:133429091..133429104,-#_a21f765de2c82c036780adb70e4eda6e | p5@LYPD1 |
| 2.46e-8 | FFCP PHASE2:Hg19::chr2:133429091..133429104,-#_a21f765de2c82c036780adb70e4eda6e | p5@LYPD1 |
