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CL:0002591

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Name:smooth muscle cell of the pulmonary artery
Namespace:FANTOM
Definition:"A smooth muscle of the pulmonary artery." [GOC:tfm]
Xrefs:
links:
BTO:0003336
Created by:tmeehan
Creation date:2011-03-06T05:01:28Z


Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.

link to ontology dataset
data


Parents

is_a:CL:0000359(vascular associated smooth muscle cell)
part_of:UBERON:0002012(pulmonary artery)



Children


derives from:FF:0000174 (human smooth muscle cell of pulmonary artery sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Cell ontology.


Human (Homo sapiens)

  • 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
  • 11365-117I6 (Smooth Muscle Cells - Pulmonary Artery, donor2)
  • 11437-118H6 (Smooth Muscle Cells - Pulmonary Artery, donor3)

Mouse (Mus musculus)

  • 11288-117A1 (Smooth Muscle Cells - Pulmonary Artery, donor1)
  • 11365-117I6 (Smooth Muscle Cells - Pulmonary Artery, donor2)
  • 11437-118H6 (Smooth Muscle Cells - Pulmonary Artery, donor3)


Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002591 (smooth muscle cell of the pulmonary artery), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr8:90366581..90366594,-#_4add52912e2339b917dc043205ec384fp@chr8:90366581..90366594, -
5.42e-195FFCP PHASE1:Hg19::chr6:21648948..21648949,+#_4add52912e2339b917dc043205ec384fp@chr6:21648948..21648949, +
5.42e-195FFCP PHASE2:Hg19::chr6:21648948..21648949,+#_4add52912e2339b917dc043205ec384fp@chr6:21648948..21648949, +
5.42e-195FFCP PHASE1:Hg19::chr8:90366581..90366594,-#_4add52912e2339b917dc043205ec384fp@chr8:90366581..90366594, -
2.55e-98FFCP PHASE2:Hg19::chr3:158928407..158928414,+#_aa00c433d07c79bab149dc79088a2a5ep@chr3:158928407..158928414, +
2.55e-98FFCP PHASE2:Hg19::chrX:23072856..23072859,-#_aa00c433d07c79bab149dc79088a2a5ep@chrX:23072856..23072859, -
2.55e-98FFCP PHASE1:Hg19::chr8:120651826..120651840,-#_aa00c433d07c79bab149dc79088a2a5ep@chr8:120651826..120651840, -
2.55e-98FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_aa00c433d07c79bab149dc79088a2a5ep26@LINC00340
2.55e-98FFCP PHASE2:Hg19::chr8:120651826..120651840,-#_aa00c433d07c79bab149dc79088a2a5ep@chr8:120651826..120651840, -
2.55e-98FFCP PHASE1:Hg19::chrX:23072856..23072859,-#_aa00c433d07c79bab149dc79088a2a5ep@chrX:23072856..23072859, -
2.55e-98FFCP PHASE2:Hg19::chr10:90749902..90749913,+#_aa00c433d07c79bab149dc79088a2a5ep14@FAS
2.55e-98FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_aa00c433d07c79bab149dc79088a2a5ep26@LINC00340
2.55e-98FFCP PHASE1:Hg19::chr10:90749902..90749913,+#_aa00c433d07c79bab149dc79088a2a5ep14@FAS
2.55e-98FFCP PHASE1:Hg19::chr3:158928407..158928414,+#_aa00c433d07c79bab149dc79088a2a5ep@chr3:158928407..158928414, +
2.39e-66FFCP PHASE2:Hg19::chr17:76824975..76824978,-#_b12c7355c0833800822bb79a78be0bd5p@chr17:76824975..76824978, -
2.39e-66FFCP PHASE1:Hg19::chr17:76824975..76824978,-#_b12c7355c0833800822bb79a78be0bd5p@chr17:76824975..76824978, -
2.39e-66FFCP PHASE2:Hg19::chr11:131614903..131614910,-#_b12c7355c0833800822bb79a78be0bd5p@chr11:131614903..131614910, -
2.39e-66FFCP PHASE1:Hg19::chr11:131614903..131614910,-#_b12c7355c0833800822bb79a78be0bd5p@chr11:131614903..131614910, -
4.66e-66FFCP PHASE1:Hg19::chr20:48184812..48184818,-#_d03a3a9c2a0aaa1b5d0042777039a032p13@PTGIS
4.66e-66FFCP PHASE2:Hg19::chr1:93043102..93043113,-#_d03a3a9c2a0aaa1b5d0042777039a032p@chr1:93043102..93043113, -
4.66e-66FFCP PHASE2:Hg19::chr7:18834859..18834879,-#_d03a3a9c2a0aaa1b5d0042777039a032p@chr7:18834859..18834879, -
4.66e-66FFCP PHASE1:Hg19::chr19:54466179..54466202,+#_d03a3a9c2a0aaa1b5d0042777039a032p1@CACNG8
4.66e-66FFCP PHASE2:Hg19::chrX:140904171..140904173,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chrX:140904171..140904173, +
4.66e-66FFCP PHASE2:Hg19::chr11:94587086..94587097,+#_d03a3a9c2a0aaa1b5d0042777039a032p19@AMOTL1
4.66e-66FFCP PHASE2:Hg19::chr9:16059821..16059828,+#_d03a3a9c2a0aaa1b5d0042777039a032+, p@chr9:16059821..16059828
4.66e-66FFCP PHASE1:Hg19::chr4:24645959..24645967,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr4:24645959..24645967, +
4.66e-66FFCP PHASE1:Hg19::chr9:16059821..16059828,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr9:16059821..16059828, +
4.66e-66FFCP PHASE1:Hg19::chr11:94587086..94587097,+#_d03a3a9c2a0aaa1b5d0042777039a032p19@AMOTL1
4.66e-66FFCP PHASE1:Hg19::chr1:176668544..176668553,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr1:176668544..176668553, +
4.66e-66FFCP PHASE1:Hg19::chr8:134047162..134047169,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr8:134047162..134047169, +
4.66e-66FFCP PHASE1:Hg19::chr1:93043102..93043113,-#_d03a3a9c2a0aaa1b5d0042777039a032p@chr1:93043102..93043113, -
4.66e-66FFCP PHASE1:Hg19::chr7:18834859..18834879,-#_d03a3a9c2a0aaa1b5d0042777039a032p@chr7:18834859..18834879, -
4.66e-66FFCP PHASE2:Hg19::chr4:24645959..24645967,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr4:24645959..24645967, +
4.66e-66FFCP PHASE1:Hg19::chr6:119590894..119590904,-#_d03a3a9c2a0aaa1b5d0042777039a032p1@ENST00000406333
4.66e-66FFCP PHASE2:Hg19::chr4:38147484..38147500,-#_d03a3a9c2a0aaa1b5d0042777039a032p@chr4:38147484..38147500, -
4.66e-66FFCP PHASE2:Hg19::chr6:119590894..119590904,-#_d03a3a9c2a0aaa1b5d0042777039a032p1@ENST00000406333
4.66e-66FFCP PHASE1:Hg19::chr4:38147484..38147500,-#_d03a3a9c2a0aaa1b5d0042777039a032p@chr4:38147484..38147500, -
4.66e-66FFCP PHASE2:Hg19::chr19:54466179..54466202,+#_d03a3a9c2a0aaa1b5d0042777039a032p1@CACNG8
4.66e-66FFCP PHASE2:Hg19::chr20:48184812..48184818,-#_d03a3a9c2a0aaa1b5d0042777039a032p13@PTGIS
4.66e-66FFCP PHASE1:Hg19::chrX:140904171..140904173,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chrX:140904171..140904173, +
4.66e-66FFCP PHASE2:Hg19::chr8:134047162..134047169,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr8:134047162..134047169, +
4.66e-66FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_d03a3a9c2a0aaa1b5d0042777039a032+, p@chr7:22687639..22687644
4.66e-66FFCP PHASE2:Hg19::chr1:176668544..176668553,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr1:176668544..176668553, +
4.66e-66FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_d03a3a9c2a0aaa1b5d0042777039a032p@chr7:22687639..22687644, +
2.42e-50FFCP PHASE1:Hg19::chr9:33797893..33797903,+#_f512830b6586da88e846e1f5e2002a07p@chr9:33797893..33797903, +
2.42e-50FFCP PHASE2:Hg19::chr9:33797893..33797903,+#_f512830b6586da88e846e1f5e2002a07p@chr9:33797893..33797903, +
3.99e-50FFCP PHASE1:Hg19::chr19:15509437..15509442,-#_e044153cb3fca2265be14bff635e83bcp@chr19:15509437..15509442, -
3.99e-50FFCP PHASE2:Hg19::chr4:891819..891820,-#_e044153cb3fca2265be14bff635e83bcp@chr4:891819..891820, -
3.99e-50FFCP PHASE2:Hg19::chr19:10218330..10218339,+#_e044153cb3fca2265be14bff635e83bcp1@SNORD105
3.99e-50FFCP PHASE2:Hg19::chr17:61995172..61995199,-#_e044153cb3fca2265be14bff635e83bcp@chr17:61995172..61995199, -
3.99e-50FFCP PHASE2:Hg19::chr19:15509437..15509442,-#_e044153cb3fca2265be14bff635e83bcp@chr19:15509437..15509442, -
3.99e-50FFCP PHASE1:Hg19::chr8:123580995..123581003,-#_e044153cb3fca2265be14bff635e83bcp@chr8:123580995..123581003, -
3.99e-50FFCP PHASE1:Hg19::chr10:103040652..103040655,+#_e044153cb3fca2265be14bff635e83bcp1@ENST00000492301
3.99e-50FFCP PHASE1:Hg19::chr19:10218330..10218339,+#_e044153cb3fca2265be14bff635e83bcp1@SNORD105
3.99e-50FFCP PHASE2:Hg19::chr6:34208414..34208429,+#_e044153cb3fca2265be14bff635e83bcp16@HMGA1
3.99e-50FFCP PHASE1:Hg19::chr6:34208414..34208429,+#_e044153cb3fca2265be14bff635e83bcp16@HMGA1
3.99e-50FFCP PHASE1:Hg19::chr18:65175930..65175941,+#_e044153cb3fca2265be14bff635e83bcp@chr18:65175930..65175941, +
3.99e-50FFCP PHASE2:Hg19::chr2:73302288..73302299,-#_e044153cb3fca2265be14bff635e83bcp13@RAB11FIP5
3.99e-50FFCP PHASE2:Hg19::chr10:103040652..103040655,+#_e044153cb3fca2265be14bff635e83bcp1@ENST00000492301
3.99e-50FFCP PHASE1:Hg19::chr17:61995172..61995199,-#_e044153cb3fca2265be14bff635e83bcp@chr17:61995172..61995199, -
3.99e-50FFCP PHASE1:Hg19::chr2:73302288..73302299,-#_e044153cb3fca2265be14bff635e83bcp13@RAB11FIP5
3.99e-50FFCP PHASE2:Hg19::chr8:123580995..123581003,-#_e044153cb3fca2265be14bff635e83bcp@chr8:123580995..123581003, -
3.99e-50FFCP PHASE1:Hg19::chr4:891819..891820,-#_e044153cb3fca2265be14bff635e83bcp@chr4:891819..891820, -
3.99e-50FFCP PHASE2:Hg19::chr18:65175930..65175941,+#_e044153cb3fca2265be14bff635e83bcp@chr18:65175930..65175941, +
6.58e-50FFCP PHASE2:Hg19::chr11:13484984..13484992,+#_7ce2cb16c46fd71901ee0116aece1bfdp5@BC031228
6.58e-50FFCP PHASE1:Hg19::chr15:71371688..71371691,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr15:71371688..71371691, -
6.58e-50FFCP PHASE2:Hg19::chr15:71371688..71371691,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr15:71371688..71371691, -
6.58e-50FFCP PHASE1:Hg19::chr4:114257151..114257163,+#_7ce2cb16c46fd71901ee0116aece1bfdp28@ANK2
6.58e-50FFCP PHASE1:Hg19::chr6:148593641..148593643,+#_7ce2cb16c46fd71901ee0116aece1bfdp@chr6:148593641..148593643, +
6.58e-50FFCP PHASE1:Hg19::chr11:13484984..13484992,+#_7ce2cb16c46fd71901ee0116aece1bfdp5@BC031228
6.58e-50FFCP PHASE2:Hg19::chr1:185703364..185703371,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr1:185703364..185703371, -
6.58e-50FFCP PHASE1:Hg19::chr2:84316409..84316414,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr2:84316409..84316414, -
6.58e-50FFCP PHASE2:Hg19::chr8:94712896..94712909,+#_7ce2cb16c46fd71901ee0116aece1bfdp10@FAM92A1
6.58e-50FFCP PHASE2:Hg19::chr19:681941..681952,+#_7ce2cb16c46fd71901ee0116aece1bfd+, p@chr19:681941..681952
6.58e-50FFCP PHASE1:Hg19::chr2:238116338..238116342,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr2:238116338..238116342, -
6.58e-50FFCP PHASE2:Hg19::chr6:148593641..148593643,+#_7ce2cb16c46fd71901ee0116aece1bfdp@chr6:148593641..148593643, +
6.58e-50FFCP PHASE2:Hg19::chr8:37374492..37374499,-#_7ce2cb16c46fd71901ee0116aece1bfdp1@ENST00000521989
6.58e-50FFCP PHASE2:Hg19::chr3:11675748..11675759,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr3:11675748..11675759, -
6.58e-50FFCP PHASE2:Hg19::chr2:238116338..238116342,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr2:238116338..238116342, -
6.58e-50FFCP PHASE1:Hg19::chr5:146890197..146890224,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr5:146890197..146890224, -
6.58e-50FFCP PHASE1:Hg19::chr8:37374492..37374499,-#_7ce2cb16c46fd71901ee0116aece1bfdp1@ENST00000521989
6.58e-50FFCP PHASE1:Hg19::chr1:185703364..185703371,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr1:185703364..185703371, -
6.58e-50FFCP PHASE2:Hg19::chr5:146890197..146890224,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr5:146890197..146890224, -
6.58e-50FFCP PHASE2:Hg19::chr4:74392579..74392583,+#_7ce2cb16c46fd71901ee0116aece1bfdp@chr4:74392579..74392583, +
6.58e-50FFCP PHASE1:Hg19::chr3:11675748..11675759,-#_7ce2cb16c46fd71901ee0116aece1bfd-, p@chr3:11675748..11675759
6.58e-50FFCP PHASE1:Hg19::chr4:74392579..74392583,+#_7ce2cb16c46fd71901ee0116aece1bfdp@chr4:74392579..74392583, +
6.58e-50FFCP PHASE1:Hg19::chr9:33797981..33798005,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr9:33797981..33798005, -
6.58e-50FFCP PHASE1:Hg19::chr8:94712896..94712909,+#_7ce2cb16c46fd71901ee0116aece1bfdp10@FAM92A1
6.58e-50FFCP PHASE1:Hg19::chr19:681941..681952,+#_7ce2cb16c46fd71901ee0116aece1bfdp@chr19:681941..681952, +
6.58e-50FFCP PHASE2:Hg19::chr9:33797981..33798005,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr9:33797981..33798005, -
6.58e-50FFCP PHASE2:Hg19::chr2:84316409..84316414,-#_7ce2cb16c46fd71901ee0116aece1bfdp@chr2:84316409..84316414, -
6.58e-50FFCP PHASE2:Hg19::chr4:114257151..114257163,+#_7ce2cb16c46fd71901ee0116aece1bfdp28@ANK2
9.91e-41FFCP PHASE2:Hg19::chr10:61845000..61845015,-#_044d1ba4130ebf4581853178884ef43cp@chr10:61845000..61845015, -
9.91e-41FFCP PHASE2:Hg19::chr5:76102212..76102217,-#_044d1ba4130ebf4581853178884ef43cp@chr5:76102212..76102217, -
9.91e-41FFCP PHASE1:Hg19::chr10:61845000..61845015,-#_044d1ba4130ebf4581853178884ef43cp@chr10:61845000..61845015, -
9.91e-41FFCP PHASE1:Hg19::chr5:76102212..76102217,-#_044d1ba4130ebf4581853178884ef43cp@chr5:76102212..76102217, -
1.48e-40FFCP PHASE1:Hg19::chr12:58287614..58287637,-#_fcf04dbdfb6549b406b9f21f781a2a88p1@ENST00000548955
1.48e-40FFCP PHASE2:Hg19::chr12:58287614..58287637,-#_fcf04dbdfb6549b406b9f21f781a2a88p1@ENST00000548955
2.21e-40FFCP PHASE1:Hg19::chr7:55149426..55149432,+#_e76f6b57f1d03f8be8b91882f454e045p@chr7:55149426..55149432, +
2.21e-40FFCP PHASE2:Hg19::chr7:55149426..55149432,+#_e76f6b57f1d03f8be8b91882f454e045p@chr7:55149426..55149432, +