CL:0002620
From FANTOM5_SSTAR
Name: | skin fibroblast | ||
---|---|---|---|
Namespace: | FANTOM | ||
Definition: | "A fibroblast of skin." [GOC:tfm] | ||
Xrefs: |
| ||
Created by: | tmeehan | ||
Creation date: | 2011-03-14T12:31:49Z |
Ontology association
Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.
link to ontology dataset
data
Parents
is_a: | CL:0000057(fibroblast) |
---|---|
part_of: | UBERON:0002097(skin of body) |
Children
is a: | CL:0002551 (fibroblast of dermis),FF:10600-108E6 (myxofibrosarcoma cell line:MFH-ino),FF:10684-109E9 (myxofibrosarcoma cell line:NMFH-1) |
---|---|
derives from: | FF:0000250 (human fibroblast of skin sample) |
Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Cell ontology.
Human (Homo sapiens)
- 10600-108E6 (myxofibrosarcoma cell line:MFH-ino)
- 10684-109E9 (myxofibrosarcoma cell line:NMFH-1)
- 11269-116G9 (Fibroblast - Dermal, donor1)
- 11346-117G5 (Fibroblast - Dermal, donor2)
- 11418-118F5 (Fibroblast - Dermal, donor3)
- 11450-119A1 (Fibroblast - Dermal, donor4)
- 11454-119A5 (Fibroblast - Dermal, donor5)
- 11458-119A9 (Fibroblast - Dermal, donor6)
- 11553-120C5 (Fibroblast - skin normal, donor1)
- 11554-120C6 (Fibroblast - skin walker warburg, donor1)
... further results Mouse (Mus musculus)
- 10600-108E6 (myxofibrosarcoma cell line:MFH-ino)
- 10684-109E9 (myxofibrosarcoma cell line:NMFH-1)
- 11269-116G9 (Fibroblast - Dermal, donor1)
- 11346-117G5 (Fibroblast - Dermal, donor2)
- 11418-118F5 (Fibroblast - Dermal, donor3)
- 11450-119A1 (Fibroblast - Dermal, donor4)
- 11454-119A5 (Fibroblast - Dermal, donor5)
- 11458-119A9 (Fibroblast - Dermal, donor6)
- 11553-120C5 (Fibroblast - skin normal, donor1)
- 11554-120C6 (Fibroblast - skin walker warburg, donor1)
Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with CL:0002620 (skin fibroblast), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
5.28e-79 | FFCP PHASE2:Hg19::chr13:24044200..24044211,+#_69afc2362cd47caecbac35b4ed413c82 | p2@LINC00327 |
5.28e-79 | FFCP PHASE1:Hg19::chr13:24044200..24044211,+#_69afc2362cd47caecbac35b4ed413c82 | p2@LINC00327 |
8.25e-75 | FFCP PHASE1:Hg19::chr4:184271970..184271992,-#_cd8e8a4d931ee4d2f547bee29ae9a459 | p@chr4:184271970..184271992, - |
8.25e-75 | FFCP PHASE2:Hg19::chr4:184271970..184271992,-#_cd8e8a4d931ee4d2f547bee29ae9a459 | p@chr4:184271970..184271992, - |
3.0e-69 | FFCP PHASE1:Hg19::chr22:48819856..48819861,+#_b2137156d4ec73abfc39c5cea573d675 | p@chr22:48819856..48819861, + |
3.0e-69 | FFCP PHASE2:Hg19::chr22:48819856..48819861,+#_b2137156d4ec73abfc39c5cea573d675 | p@chr22:48819856..48819861, + |
1.73e-68 | FFCP PHASE2:Hg19::chr13:24044226..24044237,+#_d902ba5ca429526dffcbef1afb960859 | p1@LINC00327 |
1.73e-68 | FFCP PHASE1:Hg19::chr13:24044226..24044237,+#_d902ba5ca429526dffcbef1afb960859 | p1@LINC00327 |
2.25e-64 | FFCP PHASE2:Hg19::chr15:33180498..33180522,-#_f9ac078cc1bca3493594eed3e11b7270 | p4@FMN1 |
2.25e-64 | FFCP PHASE1:Hg19::chr15:33180498..33180522,-#_f9ac078cc1bca3493594eed3e11b7270 | p4@FMN1 |
2.96e-62 | FFCP PHASE2:Hg19::chr1:197886772..197886790,+#_b0b5a9a6b40943104228f92fc176d479 | p4@LHX9 |
2.96e-62 | FFCP PHASE1:Hg19::chr1:197886772..197886790,+#_b0b5a9a6b40943104228f92fc176d479 | p4@LHX9 |
5.44e-61 | FFCP PHASE2:Hg19::chr1:198636258..198636278,-#_8978a4c66efa2ddfcabe07d5d64f80ae | p1@ENST00000413577 |
5.44e-61 | FFCP PHASE1:Hg19::chr1:198636258..198636278,-#_8978a4c66efa2ddfcabe07d5d64f80ae | p1@ENST00000413577 |
6.11e-60 | FFCP PHASE2:Hg19::chr15:33180622..33180633,-#_f6186c532842ecfaac0dae0a397c04f2 | p13@FMN1 |
6.11e-60 | FFCP PHASE1:Hg19::chr15:33180622..33180633,-#_f6186c532842ecfaac0dae0a397c04f2 | p13@FMN1 |
1.75e-59 | FFCP PHASE1:Hg19::chr1:198636234..198636246,-#_c7732738dcaec016d870c8dd9f28df0d | p2@ENST00000413577 |
1.75e-59 | FFCP PHASE2:Hg19::chr1:198636234..198636246,-#_c7732738dcaec016d870c8dd9f28df0d | p2@ENST00000413577 |
2.81e-57 | FFCP PHASE2:Hg19::chr15:33180558..33180570,-#_c28a75961c4aae95731c5cebbfe0ad80 | p9@FMN1 |
2.81e-57 | FFCP PHASE1:Hg19::chr15:33180558..33180570,-#_c28a75961c4aae95731c5cebbfe0ad80 | p9@FMN1 |
2.16e-56 | FFCP PHASE1:Hg19::chr14:38371323..38371347,-#_7493c8669eb0c36ca97f0cda106c009e | p1@ENST00000554257, p1@uc001wuk.1 |
2.16e-56 | FFCP PHASE2:Hg19::chr14:38371323..38371347,-#_7493c8669eb0c36ca97f0cda106c009e | p1@ENST00000554257, p1@uc001wuk.1 |
4.55e-54 | FFCP PHASE1:Hg19::chr1:197886421..197886432,+#_4f7c584d9e862267162b1ef34b4753b0 | p2@LHX9 |
4.55e-54 | FFCP PHASE2:Hg19::chr1:197886421..197886432,+#_4f7c584d9e862267162b1ef34b4753b0 | p2@LHX9 |
1.36e-53 | FFCP PHASE1:Hg19::chr14:32963433..32963487,+#_c953bf70d92f8a474143de9870054b04 | p4@AKAP6 |
1.36e-53 | FFCP PHASE2:Hg19::chr14:32963433..32963487,+#_c953bf70d92f8a474143de9870054b04 | p4@AKAP6 |
1.37e-52 | FFCP PHASE2:Hg19::chr1:198636401..198636419,-#_c570acd66874668ecccc5c4b0cd4e4d1 | p3@ENST00000413577 |
1.37e-52 | FFCP PHASE1:Hg19::chr1:198636401..198636419,-#_c570acd66874668ecccc5c4b0cd4e4d1 | p3@ENST00000413577 |
5.26e-49 | FFCP PHASE1:Hg19::chr12:88813132..88813143,-#_56d09f05117b8118ff98c3197af05fef | p@chr12:88813132..88813143, - |
5.26e-49 | FFCP PHASE2:Hg19::chr12:88813132..88813143,-#_56d09f05117b8118ff98c3197af05fef | p@chr12:88813132..88813143, - |
7.25e-49 | FFCP PHASE1:Hg19::chr1:197886646..197886657,+#_1cd0258c217401b843e0ad72f2f97396 | p5@LHX9 |
7.25e-49 | FFCP PHASE2:Hg19::chr1:197886646..197886657,+#_1cd0258c217401b843e0ad72f2f97396 | p5@LHX9 |
8.98e-46 | FFCP PHASE1:Hg19::chr6:140893217..140893243,-#_bf35dbb9eb6141f914b3bddba9cfad04 | p@chr6:140893217..140893243, - |
8.98e-46 | FFCP PHASE2:Hg19::chr6:140893217..140893243,-#_bf35dbb9eb6141f914b3bddba9cfad04 | p@chr6:140893217..140893243, - |
3.79e-45 | FFCP PHASE2:Hg19::chr5:167087144..167087148,-#_8ae8414b1dfd3401f8aa89b3633f03ef | p1@ENST00000522956 |
3.79e-45 | FFCP PHASE1:Hg19::chr5:167087144..167087148,-#_8ae8414b1dfd3401f8aa89b3633f03ef | p1@ENST00000522956 |
2.97e-44 | FFCP PHASE2:Hg19::chr3:58021410..58021424,+#_8aeb73aefc29f37a787af1072c3da5ac | p@chr3:58021410..58021424, + |
2.97e-44 | FFCP PHASE1:Hg19::chr3:58021410..58021424,+#_8aeb73aefc29f37a787af1072c3da5ac | p@chr3:58021410..58021424, + |
1.0e-42 | FFCP PHASE1:Hg19::chr21:28336890..28336913,-#_2111c8b682f7ad59a124dc4d3000ad86 | p@chr21:28336890..28336913, - |
1.0e-42 | FFCP PHASE2:Hg19::chr21:28336890..28336913,-#_2111c8b682f7ad59a124dc4d3000ad86 | p@chr21:28336890..28336913, - |
1.22e-42 | FFCP PHASE1:Hg19::chr1:115782479..115782490,+#_c749acfcae969b7da29577b63e40cdf5 | p@chr1:115782479..115782490, + |
1.22e-42 | FFCP PHASE2:Hg19::chr1:115782479..115782490,+#_c749acfcae969b7da29577b63e40cdf5 | p@chr1:115782479..115782490, + |
1.99e-42 | FFCP PHASE2:Hg19::chr6:113697400..113697411,-#_97dadb064a408429d36f71e4b6314f62 | p@chr6:113697400..113697411, - |
1.99e-42 | FFCP PHASE1:Hg19::chr6:113697400..113697411,-#_97dadb064a408429d36f71e4b6314f62 | p@chr6:113697400..113697411, - |
2.44e-42 | FFCP PHASE2:Hg19::chr1:197886665..197886732,+#_0c2fc39607609f025da789e390f82381 | p3@LHX9 |
2.44e-42 | FFCP PHASE1:Hg19::chr1:197886665..197886732,+#_0c2fc39607609f025da789e390f82381 | p3@LHX9 |
2.91e-42 | FFCP PHASE1:Hg19::chr8:23564380..23564391,+#_520414c9276135e7228357afd8136b30 | p1@ENST00000523874 |
2.91e-42 | FFCP PHASE2:Hg19::chr8:23564380..23564391,+#_520414c9276135e7228357afd8136b30 | p1@ENST00000523874 |
2.41e-40 | FFCP PHASE1:Hg19::chr17:1936721..1936751,+#_b0982d3b72cfa8c5931aa914d64142c8 | p3@DPH1 |
2.41e-40 | FFCP PHASE2:Hg19::chr17:1936721..1936751,+#_b0982d3b72cfa8c5931aa914d64142c8 | p3@DPH1 |
1.09e-39 | FFCP PHASE2:Hg19::chr6:113697548..113697566,-#_5582a90f4a40af6b9a7f7947fccfbc23 | p@chr6:113697548..113697566, - |
1.09e-39 | FFCP PHASE1:Hg19::chr6:113697548..113697566,-#_5582a90f4a40af6b9a7f7947fccfbc23 | p@chr6:113697548..113697566, - |
1.11e-38 | FFCP PHASE2:Hg19::chr5:167181769..167181798,+#_16018e8b0f0d1fa1016651cad49e903e | p17@ODZ2 |
1.11e-38 | FFCP PHASE1:Hg19::chr5:167181769..167181798,+#_16018e8b0f0d1fa1016651cad49e903e | p17@ODZ2 |
2.23e-38 | FFCP PHASE1:Hg19::chr2:239778648..239778664,+#_1aaf30f0667990e5d86fa4f6d3bba673 | +, p@chr2:239778648..239778664 |
2.23e-38 | FFCP PHASE2:Hg19::chr2:239778648..239778664,+#_1aaf30f0667990e5d86fa4f6d3bba673 | p@chr2:239778648..239778664, + |
2.45e-38 | FFCP PHASE1:Hg19::chr18:52969844..52969895,-#_d91689a2f8c92d7b9e80817ddcce6f04 | p27@TCF4 |
2.45e-38 | FFCP PHASE2:Hg19::chr18:52969844..52969895,-#_d91689a2f8c92d7b9e80817ddcce6f04 | p27@TCF4 |
2.79e-38 | FFCP PHASE2:Hg19::chr12:51986236..51986261,-#_d9b8defca948366a8339cbb4687387de | p@chr12:51986236..51986261, - |
2.79e-38 | FFCP PHASE1:Hg19::chr12:51986236..51986261,-#_d9b8defca948366a8339cbb4687387de | p@chr12:51986236..51986261, - |
4.55e-38 | FFCP PHASE2:Hg19::chr1:197889151..197889159,+#_2c9a4fd4fe2d3126a49745e3756700ff | p@chr1:197889151..197889159, + |
4.55e-38 | FFCP PHASE1:Hg19::chr1:197889151..197889159,+#_2c9a4fd4fe2d3126a49745e3756700ff | p@chr1:197889151..197889159, + |
6.71e-38 | FFCP PHASE1:Hg19::chr5:167148342..167148357,+#_ca4c98027ab9d92e8b66b134e1c52d66 | p1@ENST00000517346 |
6.71e-38 | FFCP PHASE2:Hg19::chr5:167148342..167148357,+#_ca4c98027ab9d92e8b66b134e1c52d66 | p1@ENST00000517346 |
7.92e-38 | FFCP PHASE2:Hg19::chr2:36784074..36784084,-#_ffd70640dbbbfebd12a948c7fcd57baa | p@chr2:36784074..36784084, - |
7.92e-38 | FFCP PHASE1:Hg19::chr2:36784074..36784084,-#_ffd70640dbbbfebd12a948c7fcd57baa | p@chr2:36784074..36784084, - |
1.37e-37 | FFCP PHASE1:Hg19::chr7:84122019..84122030,-#_e16fecf353bc522a2fdd00bc28a7cd77 | p18@SEMA3A |
1.37e-37 | FFCP PHASE2:Hg19::chr7:84122019..84122030,-#_e16fecf353bc522a2fdd00bc28a7cd77 | p18@SEMA3A |
4.82e-37 | FFCP PHASE2:Hg19::chr7:84121947..84121959,-#_d746fb8c7beef84e3bf5779e87903871 | p12@SEMA3A |
4.82e-37 | FFCP PHASE1:Hg19::chr7:84121947..84121959,-#_d746fb8c7beef84e3bf5779e87903871 | p12@SEMA3A |
7.5e-37 | FFCP PHASE1:Hg19::chr6:140985056..140985096,-#_47aaf88e53509cfce95695be288e6ec9 | p@chr6:140985056..140985096, - |
7.5e-37 | FFCP PHASE2:Hg19::chr6:140985056..140985096,-#_47aaf88e53509cfce95695be288e6ec9 | p@chr6:140985056..140985096, - |
3.48e-36 | FFCP PHASE2:Hg19::chr5:127873659..127873667,-#_701b99e97742ccb3becb05bf50d0bac3 | p12@FBN2 |
3.48e-36 | FFCP PHASE1:Hg19::chr5:127873659..127873667,-#_701b99e97742ccb3becb05bf50d0bac3 | p12@FBN2 |
4.93e-36 | FFCP PHASE2:Hg19::chr9:132472174..132472192,+#_8e7124899f4cedb184d813bad9ab5091 | p@chr9:132472174..132472192, + |
4.93e-36 | FFCP PHASE1:Hg19::chr9:132472174..132472192,+#_8e7124899f4cedb184d813bad9ab5091 | p@chr9:132472174..132472192, + |
5.38e-36 | FFCP PHASE2:Hg19::chr12:88801610..88801614,-#_77ca711afa49f2cbcf4ac81561145603 | p@chr12:88801610..88801614, - |
5.38e-36 | FFCP PHASE1:Hg19::chr12:88801610..88801614,-#_77ca711afa49f2cbcf4ac81561145603 | p@chr12:88801610..88801614, - |
6.14e-36 | FFCP PHASE1:Hg19::chr19:43690649..43690663,-#_507ebea4dac706786ca541444475579d | p2@PSG5 |
6.14e-36 | FFCP PHASE2:Hg19::chr19:43690649..43690663,-#_507ebea4dac706786ca541444475579d | p2@PSG5 |
6.47e-36 | FFCP PHASE1:Hg19::chr1:240256439..240256449,-#_2fed3581c12e17157ee2c7a59c7f951b | p@chr1:240256439..240256449, - |
6.47e-36 | FFCP PHASE2:Hg19::chr1:240256439..240256449,-#_2fed3581c12e17157ee2c7a59c7f951b | p@chr1:240256439..240256449, - |
1.33e-35 | FFCP PHASE1:Hg19::chr1:240448610..240448624,+#_dc28cd5b99edadcd55d944507297a01d | +, p@chr1:240448610..240448624 |
1.33e-35 | FFCP PHASE2:Hg19::chr1:240448610..240448624,+#_dc28cd5b99edadcd55d944507297a01d | p@chr1:240448610..240448624, + |
1.4e-35 | FFCP PHASE1:Hg19::chr12:88813089..88813098,-#_ef11bf1f117cfe02e0a394cda0aa13c0 | p@chr12:88813089..88813098, - |
1.4e-35 | FFCP PHASE2:Hg19::chr12:88813089..88813098,-#_ef11bf1f117cfe02e0a394cda0aa13c0 | p@chr12:88813089..88813098, - |
1.9e-35 | FFCP PHASE1:Hg19::chr18:52969674..52969685,-#_e9de429d3eed22246d7f7f87f9c15599 | p24@TCF4 |
1.9e-35 | FFCP PHASE2:Hg19::chr18:52969674..52969685,-#_e9de429d3eed22246d7f7f87f9c15599 | p24@TCF4 |
2.59e-35 | FFCP PHASE2:Hg19::chr11:26210383..26210402,+#_141453d787595b7ce6c7325fda9d87f6 | p2@ENST00000531798 |
2.59e-35 | FFCP PHASE1:Hg19::chr11:26210383..26210402,+#_141453d787595b7ce6c7325fda9d87f6 | p2@ENST00000531798 |
4.99e-35 | FFCP PHASE1:Hg19::chr9:81628797..81628811,+#_84d4b40b97b8da6eced55622a6d00dfb | p@chr9:81628797..81628811, + |
4.99e-35 | FFCP PHASE2:Hg19::chr9:81628797..81628811,+#_84d4b40b97b8da6eced55622a6d00dfb | p@chr9:81628797..81628811, + |
5.16e-35 | FFCP PHASE1:Hg19::chr15:33180439..33180446,-#_a45b57ab60b5c7de72ef440967eff552 | p@chr15:33180439..33180446, - |
5.16e-35 | FFCP PHASE2:Hg19::chr15:33180439..33180446,-#_a45b57ab60b5c7de72ef440967eff552 | p@chr15:33180439..33180446, - |
8.83e-35 | FFCP PHASE2:Hg19::chr4:127876558..127876592,-#_4608ae14af56fa251a349b97372df9f5 | p1@ENST00000515428 |
8.83e-35 | FFCP PHASE1:Hg19::chr4:127876558..127876592,-#_4608ae14af56fa251a349b97372df9f5 | p1@ENST00000515428 |
1.85e-34 | FFCP PHASE1:Hg19::chr8:19171231..19171238,+#_c7bac506568a3163efbac96c07e72a54 | p7@SH2D4A |
1.85e-34 | FFCP PHASE2:Hg19::chr8:19171231..19171238,+#_c7bac506568a3163efbac96c07e72a54 | p7@SH2D4A |
2.29e-34 | FFCP PHASE2:Hg19::chr11:121972578..121972593,-#_401ae3ac1835f350349dc8815c9ee6f9 | p3@ENST00000530955 |
2.29e-34 | FFCP PHASE1:Hg19::chr11:121972578..121972593,-#_401ae3ac1835f350349dc8815c9ee6f9 | p3@ENST00000530955 |