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{{DOID
 
{{DOID
|id=DOID:169
+
|alt_id=
|name=neuroendocrine tumor
 
|namespace=disease_ontology
 
|def=
 
|xref=ICD9CM:209;;ICD9CM:209-209.99;;MSH:D018358;;NCI:C3809;;SNOMEDCT_2010_1_31:128928004;;SNOMEDCT_2010_1_31:255046005;;UMLS_CUI:C0206754
 
|is_a=DOID:171
 
|synonym="neuroendocrine neoplasm" EXACT [SNOMEDCT_2005_07_31:128928004];;"neuroendocrine neoplasm" EXACT [NCI2004_11_17:C3809];;"neuroendocrine tumor (disorder)" EXACT [SNOMEDCT_2005_07_31:255046005]
 
 
|comment=
 
|comment=
|alt_id=
 
|disjoint_from=
 
|union_of=
 
 
|created_by=
 
|created_by=
|obo_creation_date=
+
|def=
|subset=
 
 
|derives_from=
 
|derives_from=
 
|develops_from=
 
|develops_from=
 +
|disjoint_from=
 
|has_quality=
 
|has_quality=
 +
|id=DOID:169
 +
|is_a=DOID:171
 +
|is_obsolete=
 
|located_in=
 
|located_in=
 +
|name=neuroendocrine tumor
 +
|namespace=FANTOM
 +
|obo_creation_date=
 
|part_of=
 
|part_of=
 +
|preceded_by=
 
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
 
|property_value=IAO:0000412 file:/Users/cjm/Dropbox/fantom5/HumanDO.obo
|is_obsolete=
+
|subset=
|preceded_by=
+
|synonym="neuroendocrine neoplasm" EXACT [SNOMEDCT_2005_07_31:128928004];;"neuroendocrine neoplasm" EXACT [NCI2004_11_17:C3809];;"neuroendocrine tumor (disorder)" EXACT [SNOMEDCT_2005_07_31:255046005]
 +
|union_of=
 +
|xref=ICD9CM:209;;ICD9CM:209-209.99;;MSH:D018358;;NCI:C3809;;SNOMEDCT_2010_1_31:128928004;;SNOMEDCT_2010_1_31:255046005;;UMLS_CUI:C0206754
 
}}
 
}}

Latest revision as of 07:49, 12 September 2014

Name:neuroendocrine tumor
Namespace:FANTOM
Xrefs:
links:

ICD9CM:209
ICD9CM:209-209.99
MSH:D018358
NCI:C3809
SNOMEDCT_2010_1_31:128928004
SNOMEDCT_2010_1_31:255046005

UMLS_CUI:C0206754
Synonyms: "neuroendocrine neoplasm" EXACT [SNOMEDCT_2005_07_31:128928004]
"neuroendocrine neoplasm" EXACT [NCI2004_11_17:C3809]
"neuroendocrine tumor (disorder)" EXACT [SNOMEDCT_2005_07_31:255046005]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:171(neuroectodermal tumor)



Children


is a:DOID:4430 (somatostatinoma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:169 (neuroendocrine tumor), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.83e-98FFCP PHASE1:Hg19::chr11:71952309..71952319,-#_78ef6175a8f2dbe947ab04cf81b16a13p2@PHOX2A
1.83e-98FFCP PHASE1:Hg19::chr2:16082384..16082391,+#_78ef6175a8f2dbe947ab04cf81b16a13p9@MYCN
1.83e-98FFCP PHASE1:Hg19::chr2:16081024..16081034,+#_78ef6175a8f2dbe947ab04cf81b16a13p10@MYCN
1.83e-98FFCP PHASE2:Hg19::chr11:71952309..71952319,-#_78ef6175a8f2dbe947ab04cf81b16a13p2@PHOX2A
1.83e-98FFCP PHASE1:Hg19::chr1:50569575..50569586,+#_78ef6175a8f2dbe947ab04cf81b16a13p11@ELAVL4
1.83e-98FFCP PHASE2:Hg19::chr1:50569575..50569586,+#_78ef6175a8f2dbe947ab04cf81b16a13p11@ELAVL4
1.83e-98FFCP PHASE1:Hg19::chr4:41884620..41884663,-#_78ef6175a8f2dbe947ab04cf81b16a13p1@ENST00000504870
1.83e-98FFCP PHASE1:Hg19::chr4:41859832..41859854,+#_78ef6175a8f2dbe947ab04cf81b16a13p@chr4:41859832..41859854, +
1.83e-98FFCP PHASE2:Hg19::chr4:41884620..41884663,-#_78ef6175a8f2dbe947ab04cf81b16a13p1@ENST00000504870
1.83e-98FFCP PHASE2:Hg19::chr4:41859832..41859854,+#_78ef6175a8f2dbe947ab04cf81b16a13p@chr4:41859832..41859854, +
1.83e-98FFCP PHASE2:Hg19::chr2:16082384..16082391,+#_78ef6175a8f2dbe947ab04cf81b16a13p9@MYCN
1.83e-98FFCP PHASE2:Hg19::chr2:16081024..16081034,+#_78ef6175a8f2dbe947ab04cf81b16a13p10@MYCN
1.1e-87FFCP PHASE2:Hg19::chr4:41750860..41750867,-#_0253e308f1960ffb84ef6c214e8aa4bap8@PHOX2B
1.1e-87FFCP PHASE1:Hg19::chr4:41750860..41750867,-#_0253e308f1960ffb84ef6c214e8aa4bap8@PHOX2B
1.37e-87FFCP PHASE1:Hg19::chr8:142878006..142878015,+#_2d7a25108b9f2c987dc0215cb9d4dabfp@chr8:142878006..142878015, +
1.37e-87FFCP PHASE2:Hg19::chr8:142878006..142878015,+#_2d7a25108b9f2c987dc0215cb9d4dabfp@chr8:142878006..142878015, +
2.58e-74FFCP PHASE1:Hg19::chr4:174440390..174440400,-#_a6ae962c6f95b9fd415a9b576e631888p@chr4:174440390..174440400, -
2.58e-74FFCP PHASE2:Hg19::chr2:16082395..16082415,+#_a6ae962c6f95b9fd415a9b576e631888p6@MYCN
2.58e-74FFCP PHASE2:Hg19::chr2:74735290..74735299,-#_a6ae962c6f95b9fd415a9b576e631888p11@PCGF1
2.58e-74FFCP PHASE2:Hg19::chr4:174440390..174440400,-#_a6ae962c6f95b9fd415a9b576e631888p@chr4:174440390..174440400, -
2.58e-74FFCP PHASE1:Hg19::chr2:16082395..16082415,+#_a6ae962c6f95b9fd415a9b576e631888p6@MYCN
2.58e-74FFCP PHASE2:Hg19::chr2:16082418..16082429,+#_a6ae962c6f95b9fd415a9b576e631888p8@MYCN
2.58e-74FFCP PHASE2:Hg19::chr5:168271880..168271889,-#_a6ae962c6f95b9fd415a9b576e631888p15@SLIT3
2.58e-74FFCP PHASE1:Hg19::chr2:16082418..16082429,+#_a6ae962c6f95b9fd415a9b576e631888p8@MYCN
2.58e-74FFCP PHASE1:Hg19::chr5:168271880..168271889,-#_a6ae962c6f95b9fd415a9b576e631888p15@SLIT3
2.58e-74FFCP PHASE1:Hg19::chr2:74735290..74735299,-#_a6ae962c6f95b9fd415a9b576e631888p11@PCGF1
3.31e-74FFCP PHASE2:Hg19::chr2:74735271..74735288,-#_77abb64ee2b99a17b38a283623f5d86bp10@PCGF1
3.31e-74FFCP PHASE1:Hg19::chr2:74735271..74735288,-#_77abb64ee2b99a17b38a283623f5d86bp10@PCGF1
3.31e-74FFCP PHASE1:Hg19::chr11:71952772..71952788,-#_77abb64ee2b99a17b38a283623f5d86bp@chr11:71952772..71952788, -
3.31e-74FFCP PHASE2:Hg19::chr11:71952772..71952788,-#_77abb64ee2b99a17b38a283623f5d86bp@chr11:71952772..71952788, -
4.26e-74FFCP PHASE1:Hg19::chr4:175257438..175257442,+#_2980704a3e6b242ab13733fb80122cbfp@chr4:175257438..175257442, +
4.26e-74FFCP PHASE2:Hg19::chr4:175257438..175257442,+#_2980704a3e6b242ab13733fb80122cbfp@chr4:175257438..175257442, +
2.62e-66FFCP PHASE1:Hg19::chr4:41750895..41750904,-#_6ca878f5932dc5799a089c4eecde34a7p6@PHOX2B
2.62e-66FFCP PHASE2:Hg19::chr4:41750895..41750904,-#_6ca878f5932dc5799a089c4eecde34a7p6@PHOX2B
2.83e-66FFCP PHASE1:Hg19::chr5:16180927..16180934,-#_6a30c607f5571e02d2e9c760c5552ca9p7@MARCH11
2.83e-66FFCP PHASE1:Hg19::chr1:22696471..22696505,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr1:22696471..22696505, -
2.83e-66FFCP PHASE1:Hg19::chr13:37494987..37494992,-#_6a30c607f5571e02d2e9c760c5552ca9p23@SMAD9
2.83e-66FFCP PHASE2:Hg19::chr1:22696471..22696505,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr1:22696471..22696505, -
2.83e-66FFCP PHASE2:Hg19::chr4:113870230..113870237,+#_6a30c607f5571e02d2e9c760c5552ca9+, p@chr4:113870230..113870237
2.83e-66FFCP PHASE2:Hg19::chr4:174954376..174954399,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174954376..174954399, -
2.83e-66FFCP PHASE1:Hg19::chr4:174968748..174968753,+#_6a30c607f5571e02d2e9c760c5552ca9+, p@chr4:174968748..174968753
2.83e-66FFCP PHASE1:Hg19::chr7:19184929..19184938,-#_6a30c607f5571e02d2e9c760c5552ca9p4@FERD3L
2.83e-66FFCP PHASE1:Hg19::chr4:41875797..41875802,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:41875797..41875802, -
2.83e-66FFCP PHASE2:Hg19::chr11:71955016..71955024,-#_6a30c607f5571e02d2e9c760c5552ca9p7@PHOX2A
2.83e-66FFCP PHASE2:Hg19::chr13:36045103..36045110,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr13:36045103..36045110, +
2.83e-66FFCP PHASE2:Hg19::chr7:8276508..8276551,-#_6a30c607f5571e02d2e9c760c5552ca9p14@ICA1
2.83e-66FFCP PHASE2:Hg19::chr7:19185475..19185487,-#_6a30c607f5571e02d2e9c760c5552ca9p1@FERD3L
2.83e-66FFCP PHASE1:Hg19::chr13:36045103..36045110,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr13:36045103..36045110, +
2.83e-66FFCP PHASE2:Hg19::chr4:174930472..174930480,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930472..174930480, -
2.83e-66FFCP PHASE2:Hg19::chr4:175041762..175041777,-#_6a30c607f5571e02d2e9c760c5552ca9p2@ENST00000503140
2.83e-66FFCP PHASE1:Hg19::chr7:19185585..19185590,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185585..19185590, -
2.83e-66FFCP PHASE1:Hg19::chr7:8276508..8276551,-#_6a30c607f5571e02d2e9c760c5552ca9p14@ICA1
2.83e-66FFCP PHASE1:Hg19::chr4:174930547..174930558,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930547..174930558, -
2.83e-66FFCP PHASE2:Hg19::chr7:19186529..19186536,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19186529..19186536, +
2.83e-66FFCP PHASE2:Hg19::chr2:29728669..29728672,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29728669..29728672, -
2.83e-66FFCP PHASE1:Hg19::chr11:71952706..71952712,-#_6a30c607f5571e02d2e9c760c5552ca9p4@PHOX2A
2.83e-66FFCP PHASE1:Hg19::chr7:19185044..19185056,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185044..19185056, +
2.83e-66FFCP PHASE1:Hg19::chr5:168310338..168310348,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr5:168310338..168310348, -
2.83e-66FFCP PHASE2:Hg19::chr17:11389592..11389599,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr17:11389592..11389599, -
2.83e-66FFCP PHASE2:Hg19::chr2:29747945..29747955,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29747945..29747955, -
2.83e-66FFCP PHASE2:Hg19::chr18:56886837..56886844,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:56886837..56886844, +
2.83e-66FFCP PHASE2:Hg19::chr7:8276855..8276873,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:8276855..8276873, +
2.83e-66FFCP PHASE2:Hg19::chr7:19185493..19185503,-#_6a30c607f5571e02d2e9c760c5552ca9p2@FERD3L
2.83e-66FFCP PHASE2:Hg19::chr4:41875797..41875802,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:41875797..41875802, -
2.83e-66FFCP PHASE2:Hg19::chr2:30142997..30143009,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:30142997..30143009, -
2.83e-66FFCP PHASE1:Hg19::chr17:11389592..11389599,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr17:11389592..11389599, -
2.83e-66FFCP PHASE2:Hg19::chr4:174930493..174930503,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930493..174930503, -
2.83e-66FFCP PHASE1:Hg19::chr7:8276855..8276873,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:8276855..8276873, +
2.83e-66FFCP PHASE2:Hg19::chr7:8302002..8302015,-#_6a30c607f5571e02d2e9c760c5552ca9p10@ICA1
2.83e-66FFCP PHASE1:Hg19::chr17:74540293..74540300,+#_6a30c607f5571e02d2e9c760c5552ca9p15@PRCD
2.83e-66FFCP PHASE2:Hg19::chr11:71952706..71952712,-#_6a30c607f5571e02d2e9c760c5552ca9p4@PHOX2A
2.83e-66FFCP PHASE2:Hg19::chr4:174968748..174968753,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174968748..174968753, +
2.83e-66FFCP PHASE1:Hg19::chr7:8302002..8302015,-#_6a30c607f5571e02d2e9c760c5552ca9p10@ICA1
2.83e-66FFCP PHASE1:Hg19::chr4:175041125..175041137,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:175041125..175041137, -
2.83e-66FFCP PHASE1:Hg19::chr18:77044132..77044175,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:77044132..77044175, +
2.83e-66FFCP PHASE1:Hg19::chr7:19185475..19185487,-#_6a30c607f5571e02d2e9c760c5552ca9p1@FERD3L
2.83e-66FFCP PHASE2:Hg19::chr2:29894082..29894092,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29894082..29894092, -
2.83e-66FFCP PHASE2:Hg19::chr5:16180927..16180934,-#_6a30c607f5571e02d2e9c760c5552ca9p7@MARCH11
2.83e-66FFCP PHASE1:Hg19::chr2:29728669..29728672,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29728669..29728672, -
2.83e-66FFCP PHASE2:Hg19::chr7:19185559..19185569,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19185559..19185569, -
2.83e-66FFCP PHASE2:Hg19::chr4:174930547..174930558,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930547..174930558, -
2.83e-66FFCP PHASE1:Hg19::chr7:19186529..19186536,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr7:19186529..19186536, +
2.83e-66FFCP PHASE1:Hg19::chr4:174954376..174954399,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174954376..174954399, -
2.83e-66FFCP PHASE2:Hg19::chr18:77044132..77044175,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:77044132..77044175, +
2.83e-66FFCP PHASE1:Hg19::chr2:29747945..29747955,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29747945..29747955, -
2.83e-66FFCP PHASE1:Hg19::chr2:30142997..30143009,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:30142997..30143009, -
2.83e-66FFCP PHASE2:Hg19::chr12:85380546..85380557,+#_6a30c607f5571e02d2e9c760c5552ca9+, p@chr12:85380546..85380557
2.83e-66FFCP PHASE2:Hg19::chr2:16082933..16082942,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:16082933..16082942, +
2.83e-66FFCP PHASE1:Hg19::chr18:56886837..56886844,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr18:56886837..56886844, +
2.83e-66FFCP PHASE1:Hg19::chr4:175041762..175041777,-#_6a30c607f5571e02d2e9c760c5552ca9p2@ENST00000503140
2.83e-66FFCP PHASE2:Hg19::chr7:19184929..19184938,-#_6a30c607f5571e02d2e9c760c5552ca9p4@FERD3L
2.83e-66FFCP PHASE1:Hg19::chr7:19185493..19185503,-#_6a30c607f5571e02d2e9c760c5552ca9p2@FERD3L
2.83e-66FFCP PHASE2:Hg19::chr17:74540293..74540300,+#_6a30c607f5571e02d2e9c760c5552ca9p15@PRCD
2.83e-66FFCP PHASE1:Hg19::chr4:174930472..174930480,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr4:174930472..174930480, -
2.83e-66FFCP PHASE2:Hg19::chr7:19185585..19185590,-#_6a30c607f5571e02d2e9c760c5552ca9-, p@chr7:19185585..19185590
2.83e-66FFCP PHASE1:Hg19::chr2:29894082..29894092,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr2:29894082..29894092, -
2.83e-66FFCP PHASE2:Hg19::chr13:37494987..37494992,-#_6a30c607f5571e02d2e9c760c5552ca9p23@SMAD9
2.83e-66FFCP PHASE2:Hg19::chr5:168310338..168310348,-#_6a30c607f5571e02d2e9c760c5552ca9p@chr5:168310338..168310348, -
2.83e-66FFCP PHASE1:Hg19::chr12:85380546..85380557,+#_6a30c607f5571e02d2e9c760c5552ca9p@chr12:85380546..85380557, +
2.83e-66FFCP PHASE1:Hg19::chr11:71955016..71955024,-#_6a30c607f5571e02d2e9c760c5552ca9p7@PHOX2A