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DOID:3451

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Name:skin carcinoma
Namespace:FANTOM
Definition:"A carcinoma that is located_in tissues of the skin." [url:http://www.cancer.gov/cancertopics/types/skin]
Xrefs:
links:

NCI:C4914

UMLS_CUI:C0699893
Synonyms: "carcinoma OF SKIN" EXACT [MTH:683]
"carcinoma of skin" RELATED []
"Non-melanoma skin cancer" EXACT [NCI2004_11_17:C4914]

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:4159(skin cancer)



Children


is a:DOID:2513 (basal cell carcinoma),DOID:3151 (skin squamous cell carcinoma)


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3451 (skin carcinoma), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
1.55e-98FFCP PHASE1:Hg19::chr10:69686723..69686726,-#_b1568f1db64e43108f2aad4c019a4f88p@chr10:69686723..69686726, -
1.55e-98FFCP PHASE2:Hg19::chr10:69686723..69686726,-#_b1568f1db64e43108f2aad4c019a4f88p@chr10:69686723..69686726, -
4.52e-50FFCP PHASE1:Hg19::chr8:123875147..123875159,+#_eca1904d5ad88c84b634895f549bc16dp26@ZHX2
4.52e-50FFCP PHASE1:Hg19::chr18:22080172..22080183,+#_eca1904d5ad88c84b634895f549bc16dp@chr18:22080172..22080183, +
4.52e-50FFCP PHASE2:Hg19::chr1:153431372..153431378,-#_eca1904d5ad88c84b634895f549bc16dp4@S100A7
4.52e-50FFCP PHASE1:Hg19::chr7:101448249..101448254,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448249..101448254, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448277..101448287,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448277..101448287, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448277..101448287,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448277..101448287, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448101..101448113,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448101..101448113, +
4.52e-50FFCP PHASE2:Hg19::chr8:123875147..123875159,+#_eca1904d5ad88c84b634895f549bc16dp26@ZHX2
4.52e-50FFCP PHASE1:Hg19::chr7:101448101..101448113,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448101..101448113, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448176..101448184,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448176..101448184, +
4.52e-50FFCP PHASE1:Hg19::chr7:101448176..101448184,+#_eca1904d5ad88c84b634895f549bc16dp@chr7:101448176..101448184, +
4.52e-50FFCP PHASE1:Hg19::chr1:153431372..153431378,-#_eca1904d5ad88c84b634895f549bc16dp4@S100A7
4.52e-50FFCP PHASE2:Hg19::chr18:22080172..22080183,+#_eca1904d5ad88c84b634895f549bc16dp@chr18:22080172..22080183, +
4.52e-50FFCP PHASE2:Hg19::chr7:101448249..101448254,+#_eca1904d5ad88c84b634895f549bc16d+, p@chr7:101448249..101448254
3.61e-34FFCP PHASE1:Hg19::chr20:49047228..49047236,-#_9db8e46b636973bfdb2141cb9bd49fb8p@chr20:49047228..49047236, -
3.61e-34FFCP PHASE1:Hg19::chr9:97563078..97563086,+#_9db8e46b636973bfdb2141cb9bd49fb8p@chr9:97563078..97563086, +
3.61e-34FFCP PHASE2:Hg19::chr20:49047228..49047236,-#_9db8e46b636973bfdb2141cb9bd49fb8p@chr20:49047228..49047236, -
3.61e-34FFCP PHASE2:Hg19::chr9:97563078..97563086,+#_9db8e46b636973bfdb2141cb9bd49fb8p@chr9:97563078..97563086, +
5.04e-34FFCP PHASE1:Hg19::chr21:37376927..37376938,+#_7dbd9415b12ee8dfb5f4330ccdcff8b1p@chr21:37376927..37376938, +
5.04e-34FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_7dbd9415b12ee8dfb5f4330ccdcff8b1p8@SERPINB13
5.04e-34FFCP PHASE1:Hg19::chr1:76127067..76127073,-#_7dbd9415b12ee8dfb5f4330ccdcff8b1-, p@chr1:76127067..76127073
5.04e-34FFCP PHASE1:Hg19::chr17:19648916..19648937,-#_7dbd9415b12ee8dfb5f4330ccdcff8b1p10@ALDH3A1
5.04e-34FFCP PHASE2:Hg19::chr3:81671636..81671662,-#_7dbd9415b12ee8dfb5f4330ccdcff8b1p@chr3:81671636..81671662, -
5.04e-34FFCP PHASE1:Hg19::chr3:81671636..81671662,-#_7dbd9415b12ee8dfb5f4330ccdcff8b1p@chr3:81671636..81671662, -
5.04e-34FFCP PHASE2:Hg19::chr1:76127067..76127073,-#_7dbd9415b12ee8dfb5f4330ccdcff8b1p@chr1:76127067..76127073, -
5.04e-34FFCP PHASE2:Hg19::chr21:37376927..37376938,+#_7dbd9415b12ee8dfb5f4330ccdcff8b1p@chr21:37376927..37376938, +
5.04e-34FFCP PHASE2:Hg19::chr17:19648916..19648937,-#_7dbd9415b12ee8dfb5f4330ccdcff8b1p10@ALDH3A1
5.04e-34FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_7dbd9415b12ee8dfb5f4330ccdcff8b1p8@SERPINB13
7.05e-34FFCP PHASE1:Hg19::chr1:18085798..18085805,+#_430597ae1d857f5c33020b19fe2d214fp@chr1:18085798..18085805, +
7.05e-34FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_430597ae1d857f5c33020b19fe2d214fp1@ENST00000457815
7.05e-34FFCP PHASE2:Hg19::chr19:51517875..51517889,-#_430597ae1d857f5c33020b19fe2d214fp3@AK026045
7.05e-34FFCP PHASE1:Hg19::chr11:101454246..101454255,-#_430597ae1d857f5c33020b19fe2d214fp11@TRPC6
7.05e-34FFCP PHASE1:Hg19::chr1:10980427..10980431,-#_430597ae1d857f5c33020b19fe2d214fp@chr1:10980427..10980431, -
7.05e-34FFCP PHASE2:Hg19::chr11:101454246..101454255,-#_430597ae1d857f5c33020b19fe2d214fp11@TRPC6
7.05e-34FFCP PHASE2:Hg19::chr13:28542963..28542973,-#_430597ae1d857f5c33020b19fe2d214fp1@CU677005
7.05e-34FFCP PHASE1:Hg19::chr3:177508111..177508119,-#_430597ae1d857f5c33020b19fe2d214fp@chr3:177508111..177508119, -
7.05e-34FFCP PHASE1:Hg19::chr19:51517875..51517889,-#_430597ae1d857f5c33020b19fe2d214fp3@AK026045
7.05e-34FFCP PHASE1:Hg19::chr2:178179611..178179619,-#_430597ae1d857f5c33020b19fe2d214fp4@ENST00000443132
7.05e-34FFCP PHASE1:Hg19::chr17:48072063..48072074,-#_430597ae1d857f5c33020b19fe2d214fp5@DLX3
7.05e-34FFCP PHASE2:Hg19::chr1:18085798..18085805,+#_430597ae1d857f5c33020b19fe2d214fp@chr1:18085798..18085805, +
7.05e-34FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_430597ae1d857f5c33020b19fe2d214fp1@ENST00000457815
7.05e-34FFCP PHASE2:Hg19::chr2:178179611..178179619,-#_430597ae1d857f5c33020b19fe2d214fp4@ENST00000443132
7.05e-34FFCP PHASE2:Hg19::chr1:10980427..10980431,-#_430597ae1d857f5c33020b19fe2d214f-, p@chr1:10980427..10980431
7.05e-34FFCP PHASE1:Hg19::chr13:28542963..28542973,-#_430597ae1d857f5c33020b19fe2d214fp1@CU677005
7.05e-34FFCP PHASE2:Hg19::chr3:177508111..177508119,-#_430597ae1d857f5c33020b19fe2d214fp@chr3:177508111..177508119, -
7.05e-34FFCP PHASE2:Hg19::chr17:48072063..48072074,-#_430597ae1d857f5c33020b19fe2d214fp5@DLX3
4.32e-26FFCP PHASE2:Hg19::chr16:55600644..55600645,+#_9224e541f2ab3d70ccc9e9f3fbbe9e02p2@CAPNS2
4.32e-26FFCP PHASE1:Hg19::chr5:1884077..1884085,+#_9224e541f2ab3d70ccc9e9f3fbbe9e02p1@ENST00000506335
4.32e-26FFCP PHASE1:Hg19::chr16:55600644..55600645,+#_9224e541f2ab3d70ccc9e9f3fbbe9e02p2@CAPNS2
4.32e-26FFCP PHASE1:Hg19::chr1:151826151..151826159,-#_9224e541f2ab3d70ccc9e9f3fbbe9e02p3@THEM5
4.32e-26FFCP PHASE1:Hg19::chr4:73248974..73249005,+#_9224e541f2ab3d70ccc9e9f3fbbe9e02p@chr4:73248974..73249005, +
4.32e-26FFCP PHASE2:Hg19::chr1:151826151..151826159,-#_9224e541f2ab3d70ccc9e9f3fbbe9e02p3@THEM5
4.32e-26FFCP PHASE2:Hg19::chr5:1884077..1884085,+#_9224e541f2ab3d70ccc9e9f3fbbe9e02p1@ENST00000506335
4.32e-26FFCP PHASE2:Hg19::chr4:73248974..73249005,+#_9224e541f2ab3d70ccc9e9f3fbbe9e02p@chr4:73248974..73249005, +
5.56e-26FFCP PHASE1:Hg19::chr12:130647145..130647153,+#_53d797709debc43329f99f76df9b3f98p3@FZD10
5.56e-26FFCP PHASE2:Hg19::chr1:86921028..86921032,+#_53d797709debc43329f99f76df9b3f98p@chr1:86921028..86921032, +
5.56e-26FFCP PHASE2:Hg19::chr3:50367252..50367278,-#_53d797709debc43329f99f76df9b3f98p@chr3:50367252..50367278, -
5.56e-26FFCP PHASE1:Hg19::chr3:50367252..50367278,-#_53d797709debc43329f99f76df9b3f98-, p@chr3:50367252..50367278
5.56e-26FFCP PHASE2:Hg19::chr16:66906996..66906997,-#_53d797709debc43329f99f76df9b3f98p@chr16:66906996..66906997, -
5.56e-26FFCP PHASE2:Hg19::chr8:123875131..123875140,+#_53d797709debc43329f99f76df9b3f98p25@ZHX2
5.56e-26FFCP PHASE1:Hg19::chr16:66906996..66906997,-#_53d797709debc43329f99f76df9b3f98p@chr16:66906996..66906997, -
5.56e-26FFCP PHASE1:Hg19::chr1:86921028..86921032,+#_53d797709debc43329f99f76df9b3f98p@chr1:86921028..86921032, +
5.56e-26FFCP PHASE2:Hg19::chr8:120233966..120233975,+#_53d797709debc43329f99f76df9b3f98+, p@chr8:120233966..120233975
5.56e-26FFCP PHASE1:Hg19::chr6:152792772..152792787,-#_53d797709debc43329f99f76df9b3f98p@chr6:152792772..152792787, -
5.56e-26FFCP PHASE2:Hg19::chr12:130647145..130647153,+#_53d797709debc43329f99f76df9b3f98p3@FZD10
5.56e-26FFCP PHASE1:Hg19::chr17:77774350..77774360,+#_53d797709debc43329f99f76df9b3f98p@chr17:77774350..77774360, +
5.56e-26FFCP PHASE2:Hg19::chr7:101448204..101448229,+#_53d797709debc43329f99f76df9b3f98p@chr7:101448204..101448229, +
5.56e-26FFCP PHASE2:Hg19::chr17:77774350..77774360,+#_53d797709debc43329f99f76df9b3f98p@chr17:77774350..77774360, +
5.56e-26FFCP PHASE1:Hg19::chr8:123875131..123875140,+#_53d797709debc43329f99f76df9b3f98p25@ZHX2
5.56e-26FFCP PHASE1:Hg19::chr7:101448204..101448229,+#_53d797709debc43329f99f76df9b3f98p@chr7:101448204..101448229, +
5.56e-26FFCP PHASE2:Hg19::chr6:152792772..152792787,-#_53d797709debc43329f99f76df9b3f98p@chr6:152792772..152792787, -
5.56e-26FFCP PHASE1:Hg19::chr8:120233966..120233975,+#_53d797709debc43329f99f76df9b3f98p@chr8:120233966..120233975, +
7.14e-26FFCP PHASE2:Hg19::chr2:234526341..234526346,+#_380566dac2a8cdec14a58644f5573cd7p1@UGT1A8
7.14e-26FFCP PHASE1:Hg19::chr2:234526341..234526346,+#_380566dac2a8cdec14a58644f5573cd7p1@UGT1A8
9.18e-26FFCP PHASE1:Hg19::chr5:14437967..14437970,+#_80ed41ced0479862d73a43e5872c631fp@chr5:14437967..14437970, +
9.18e-26FFCP PHASE1:Hg19::chr1:118570948..118570964,-#_80ed41ced0479862d73a43e5872c631fp@chr1:118570948..118570964, -
9.18e-26FFCP PHASE2:Hg19::chr10:127591699..127591713,-#_80ed41ced0479862d73a43e5872c631fp@chr10:127591699..127591713, -
9.18e-26FFCP PHASE1:Hg19::chr10:54259346..54259353,+#_80ed41ced0479862d73a43e5872c631fp@chr10:54259346..54259353, +
9.18e-26FFCP PHASE1:Hg19::chr10:127591699..127591713,-#_80ed41ced0479862d73a43e5872c631f-, p@chr10:127591699..127591713
9.18e-26FFCP PHASE1:Hg19::chr10:92754303..92754313,+#_80ed41ced0479862d73a43e5872c631fp2@ENST00000412362
9.18e-26FFCP PHASE2:Hg19::chr10:92754303..92754313,+#_80ed41ced0479862d73a43e5872c631fp2@ENST00000412362
9.18e-26FFCP PHASE1:Hg19::chr1:153430422..153430443,-#_80ed41ced0479862d73a43e5872c631fp3@S100A7
9.18e-26FFCP PHASE2:Hg19::chr10:54259346..54259353,+#_80ed41ced0479862d73a43e5872c631fp@chr10:54259346..54259353, +
9.18e-26FFCP PHASE1:Hg19::chr14:65406349..65406358,+#_80ed41ced0479862d73a43e5872c631fp@chr14:65406349..65406358, +
9.18e-26FFCP PHASE2:Hg19::chr1:118570948..118570964,-#_80ed41ced0479862d73a43e5872c631fp@chr1:118570948..118570964, -
9.18e-26FFCP PHASE2:Hg19::chr5:14437967..14437970,+#_80ed41ced0479862d73a43e5872c631fp@chr5:14437967..14437970, +
9.18e-26FFCP PHASE2:Hg19::chr1:153430422..153430443,-#_80ed41ced0479862d73a43e5872c631fp3@S100A7
9.18e-26FFCP PHASE1:Hg19::chr3:136885144..136885147,+#_80ed41ced0479862d73a43e5872c631fp@chr3:136885144..136885147, +
9.18e-26FFCP PHASE2:Hg19::chr14:65406349..65406358,+#_80ed41ced0479862d73a43e5872c631fp@chr14:65406349..65406358, +
9.18e-26FFCP PHASE2:Hg19::chr4:152117165..152117168,+#_80ed41ced0479862d73a43e5872c631fp@chr4:152117165..152117168, +
9.18e-26FFCP PHASE1:Hg19::chr4:152117165..152117168,+#_80ed41ced0479862d73a43e5872c631fp@chr4:152117165..152117168, +
9.18e-26FFCP PHASE2:Hg19::chr3:136885144..136885147,+#_80ed41ced0479862d73a43e5872c631fp@chr3:136885144..136885147, +
3.11e-21FFCP PHASE2:Hg19::chr10:5567644..5567657,+#_3b4ed01e40d2a28d46b0b0596acfaffcp@chr10:5567644..5567657, +
3.11e-21FFCP PHASE2:Hg19::chr5:11385573..11385583,-#_3b4ed01e40d2a28d46b0b0596acfaffcp47@CTNND2
3.11e-21FFCP PHASE2:Hg19::chr4:75180763..75180777,+#_3b4ed01e40d2a28d46b0b0596acfaffcp@chr4:75180763..75180777, +
3.11e-21FFCP PHASE1:Hg19::chr10:5567644..5567657,+#_3b4ed01e40d2a28d46b0b0596acfaffcp@chr10:5567644..5567657, +
3.11e-21FFCP PHASE2:Hg19::chr1:152572708..152572714,+#_3b4ed01e40d2a28d46b0b0596acfaffcp1@LCE3C
3.11e-21FFCP PHASE1:Hg19::chr5:11385573..11385583,-#_3b4ed01e40d2a28d46b0b0596acfaffcp47@CTNND2