Personal tools

DOID:3904

From FANTOM5_SSTAR

Revision as of 16:32, 26 June 2012 by Autoedit (talk | contribs)
Jump to: navigation, search

Name:bronchogenic carcinoma
Namespace:disease_ontology
Xrefs:
links:

MSH:D002283
NCI:C35875
SNOMEDCT_2010_1_31:154485001
SNOMEDCT_2010_1_31:254622008
SNOMEDCT_2010_1_31:269561006
SNOMEDCT_2010_1_31:363493006

UMLS_CUI:C0007121
Synonyms: "BC - Bronchogenic carcinoma" EXACT [SNOMEDCT_2005_07_31:254622008]
"bronchial cancer" EXACT [CSP2005:2017-5516]
"Bronchiogenic carcinoma" EXACT [NCI2004_11_17:C35875]
"bronchogenic carcinoma" EXACT [CSP2005:2017-6052]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:154485001]
"Bronchus carcinoma" EXACT [SNOMEDCT_2005_07_31:269561006]
"cancer of bronchus" EXACT [SNOMEDCT_2005_07_31:363493006]

Ontology association<br>Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:DOID:1325(bronchus cancer)



Children
NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples

Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:3904 (bronchogenic carcinoma), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
4.76e-57FFCP PHASE1:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE1:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399533..45399540,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399533..45399540, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399294..45399301,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399294..45399301, +
4.76e-57FFCP PHASE2:Hg19::chr6:45405393..45405412,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405393..45405412, +
4.76e-57FFCP PHASE2:Hg19::chr6:45399263..45399274,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399263..45399274, +
4.76e-57FFCP PHASE2:Hg19::chr6:125378873..125378876,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:125378873..125378876, +
4.76e-57FFCP PHASE1:Hg19::chr6:45405332..45405343,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45405332..45405343, +
4.76e-57FFCP PHASE1:Hg19::chr6:45399245..45399258,+#_643d0d889628ccf12ac24901a36ea2bap@chr6:45399245..45399258, +
1.49e-38FFCP PHASE2:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE2:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE2:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr8:40525350..40525354,-#_3efaffa271a7215afa8f9beebeea155ap@chr8:40525350..40525354, -
1.49e-38FFCP PHASE2:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399724..45399733,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399724..45399733, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786593..73786601,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786593..73786601, +
1.49e-38FFCP PHASE1:Hg19::chr6:45399422..45399430,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:45399422..45399430, +
1.49e-38FFCP PHASE1:Hg19::chr6:73786620..73786627,+#_3efaffa271a7215afa8f9beebeea155ap@chr6:73786620..73786627, +
1.8e-38FFCP PHASE1:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
1.8e-38FFCP PHASE2:Hg19::chr18:10085554..10085562,+#_a89e065dbffaa49eaeb69500b6779beep@chr18:10085554..10085562, +
2.18e-38FFCP PHASE2:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
2.18e-38FFCP PHASE1:Hg19::chr2:233352641..233352675,+#_2f810072074677b83937c1f2a5e1735bp@chr2:233352641..233352675, +
1.14e-32FFCP PHASE2:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.14e-32FFCP PHASE1:Hg19::chr14:106916169..106916203,+#_0f3f47edfc78ae20205a26a9a4185251p@chr14:106916169..106916203, +
1.78e-29FFCP PHASE1:Hg19::chr11:41519057..41519065,-#_39df5efeecaef77fad20cc2f4b578036p@chr11:41519057..41519065, -
1.78e-29FFCP PHASE2:Hg19::chr2:220695661..220695670,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:220695661..220695670, +
1.78e-29FFCP PHASE2:Hg19::chr2:130564567..130564572,-#_39df5efeecaef77fad20cc2f4b578036p2@LOC100131048
1.78e-29FFCP PHASE1:Hg19::chr2:192805239..192805246,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:192805239..192805246, +
1.78e-29FFCP PHASE2:Hg19::chr7:26590606..26590616,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590606..26590616, -
1.78e-29FFCP PHASE2:Hg19::chr18:28978481..28978484,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:28978481..28978484, -
1.78e-29FFCP PHASE2:Hg19::chr13:76694533..76694542,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76694533..76694542, +
1.78e-29FFCP PHASE2:Hg19::chr8:98015305..98015315,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98015305..98015315, -
1.78e-29FFCP PHASE2:Hg19::chr8:139510692..139510697,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:139510692..139510697, -
1.78e-29FFCP PHASE2:Hg19::chr3:115898365..115898379,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:115898365..115898379, +
1.78e-29FFCP PHASE2:Hg19::chr14:89802926..89802934,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:89802926..89802934, -
1.78e-29FFCP PHASE1:Hg19::chr8:72938203..72938230,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:72938203..72938230, +
1.78e-29FFCP PHASE1:Hg19::chr6:125547084..125547089,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:125547084..125547089, +
1.78e-29FFCP PHASE1:Hg19::chr2:97625602..97625628,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:97625602..97625628, -
1.78e-29FFCP PHASE1:Hg19::chr2:222160774..222160804,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:222160774..222160804, +
1.78e-29FFCP PHASE1:Hg19::chr19:54024499..54024503,+#_39df5efeecaef77fad20cc2f4b578036p48@ZNF331
1.78e-29FFCP PHASE2:Hg19::chrX:135761853..135761876,-#_39df5efeecaef77fad20cc2f4b578036p@chrX:135761853..135761876, -
1.78e-29FFCP PHASE2:Hg19::chr7:120378742..120378768,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:120378742..120378768, -
1.78e-29FFCP PHASE1:Hg19::chr13:76694533..76694542,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:76694533..76694542, +
1.78e-29FFCP PHASE2:Hg19::chr14:36966895..36966899,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:36966895..36966899, -
1.78e-29FFCP PHASE2:Hg19::chr12:84664736..84664743,+#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000547882
1.78e-29FFCP PHASE1:Hg19::chr2:138685510..138685520,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:138685510..138685520, -
1.78e-29FFCP PHASE1:Hg19::chr18:37331745..37331763,-#_39df5efeecaef77fad20cc2f4b578036p@chr18:37331745..37331763, -
1.78e-29FFCP PHASE2:Hg19::chr9:129234745..129234747,-#_39df5efeecaef77fad20cc2f4b578036p@chr9:129234745..129234747, -
1.78e-29FFCP PHASE2:Hg19::chr6:23637684..23637686,-#_39df5efeecaef77fad20cc2f4b578036p@chr6:23637684..23637686, -
1.78e-29FFCP PHASE2:Hg19::chr15:85564362..85564385,+#_39df5efeecaef77fad20cc2f4b578036p@chr15:85564362..85564385, +
1.78e-29FFCP PHASE1:Hg19::chr8:98070371..98070384,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98070371..98070384, -
1.78e-29FFCP PHASE1:Hg19::chr6:154858754..154858762,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:154858754..154858762, +
1.78e-29FFCP PHASE1:Hg19::chr5:28571958..28571968,-#_39df5efeecaef77fad20cc2f4b578036p@chr5:28571958..28571968, -
1.78e-29FFCP PHASE1:Hg19::chr7:111234799..111234807,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:111234799..111234807, -
1.78e-29FFCP PHASE2:Hg19::chr9:17454052..17454060,+#_39df5efeecaef77fad20cc2f4b578036p@chr9:17454052..17454060, +
1.78e-29FFCP PHASE1:Hg19::chr10:129704382..129704389,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:129704382..129704389, +
1.78e-29FFCP PHASE2:Hg19::chr17:39140424..39140431,-#_39df5efeecaef77fad20cc2f4b578036p4@KRT40
1.78e-29FFCP PHASE1:Hg19::chr8:39970826..39970832,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:39970826..39970832, +
1.78e-29FFCP PHASE2:Hg19::chr6:141460346..141460355,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:141460346..141460355, +
1.78e-29FFCP PHASE1:Hg19::chr12:41194014..41194019,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:41194014..41194019, +
1.78e-29FFCP PHASE1:Hg19::chr8:57525935..57525942,+#_39df5efeecaef77fad20cc2f4b578036p@chr8:57525935..57525942, +
1.78e-29FFCP PHASE2:Hg19::chrX:10852011..10852021,-#_39df5efeecaef77fad20cc2f4b578036p27@MID1
1.78e-29FFCP PHASE2:Hg19::chr4:41750020..41750029,-#_39df5efeecaef77fad20cc2f4b578036p9@PHOX2B
1.78e-29FFCP PHASE1:Hg19::chr10:65821760..65821780,+#_39df5efeecaef77fad20cc2f4b578036p@chr10:65821760..65821780, +
1.78e-29FFCP PHASE2:Hg19::chr3:95401928..95401936,-#_39df5efeecaef77fad20cc2f4b578036p3@ENST00000494840, p3@uc003dro.1
1.78e-29FFCP PHASE1:Hg19::chr7:26590563..26590574,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:26590563..26590574, -
1.78e-29FFCP PHASE1:Hg19::chr2:135119636..135119642,+#_39df5efeecaef77fad20cc2f4b578036p@chr2:135119636..135119642, +
1.78e-29FFCP PHASE2:Hg19::chr15:62007373..62007374,-#_39df5efeecaef77fad20cc2f4b578036p2@ENST00000559590
1.78e-29FFCP PHASE2:Hg19::chr12:133040060..133040064,+#_39df5efeecaef77fad20cc2f4b578036p@chr12:133040060..133040064, +
1.78e-29FFCP PHASE1:Hg19::chr8:97972117..97972120,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:97972117..97972120, -
1.78e-29FFCP PHASE2:Hg19::chr7:95776285..95776292,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:95776285..95776292, -
1.78e-29FFCP PHASE2:Hg19::chr19:46763326..46763349,+#_39df5efeecaef77fad20cc2f4b578036p@chr19:46763326..46763349, +
1.78e-29FFCP PHASE2:Hg19::chr17:79973593..79973633,-#_39df5efeecaef77fad20cc2f4b578036p@chr17:79973593..79973633, -
1.78e-29FFCP PHASE1:Hg19::chr7:79840323..79840338,+#_39df5efeecaef77fad20cc2f4b578036p@chr7:79840323..79840338, +
1.78e-29FFCP PHASE2:Hg19::chr2:8803669..8803680,-#_39df5efeecaef77fad20cc2f4b578036p@chr2:8803669..8803680, -
1.78e-29FFCP PHASE2:Hg19::chr1:199134722..199134729,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:199134722..199134729, +
1.78e-29FFCP PHASE1:Hg19::chr3:150914192..150914197,+#_39df5efeecaef77fad20cc2f4b578036p@chr3:150914192..150914197, +
1.78e-29FFCP PHASE1:Hg19::chr16:83649482..83649491,+#_39df5efeecaef77fad20cc2f4b578036p@chr16:83649482..83649491, +
1.78e-29FFCP PHASE2:Hg19::chr6:137314390..137314394,-#_39df5efeecaef77fad20cc2f4b578036p1@ENST00000418699, p1@ENST00000432330
1.78e-29FFCP PHASE2:Hg19::chr14:60194318..60194325,-#_39df5efeecaef77fad20cc2f4b578036p22@RTN1
1.78e-29FFCP PHASE1:Hg19::chrX:48394285..48394295,+#_39df5efeecaef77fad20cc2f4b578036p@chrX:48394285..48394295, +
1.78e-29FFCP PHASE1:Hg19::chr7:95775942..95775990,-#_39df5efeecaef77fad20cc2f4b578036p@chr7:95775942..95775990, -
1.78e-29FFCP PHASE1:Hg19::chr19:46531064..46531073,+#_39df5efeecaef77fad20cc2f4b578036p@chr19:46531064..46531073, +
1.78e-29FFCP PHASE1:Hg19::chr14:58045730..58045732,-#_39df5efeecaef77fad20cc2f4b578036p@chr14:58045730..58045732, -
1.78e-29FFCP PHASE1:Hg19::chr13:25269257..25269262,+#_39df5efeecaef77fad20cc2f4b578036p@chr13:25269257..25269262, +
1.78e-29FFCP PHASE2:Hg19::chr3:86703154..86703166,-#_39df5efeecaef77fad20cc2f4b578036p@chr3:86703154..86703166, -
1.78e-29FFCP PHASE2:Hg19::chr10:101690855..101690861,-#_39df5efeecaef77fad20cc2f4b578036p14@DNMBP
1.78e-29FFCP PHASE1:Hg19::chr17:39140411..39140419,-#_39df5efeecaef77fad20cc2f4b578036p5@KRT40
1.78e-29FFCP PHASE2:Hg19::chr8:98108435..98108438,-#_39df5efeecaef77fad20cc2f4b578036p@chr8:98108435..98108438, -
1.78e-29FFCP PHASE2:Hg19::chr1:81686906..81686911,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:81686906..81686911, +
1.78e-29FFCP PHASE1:Hg19::chr6:140771120..140771128,+#_39df5efeecaef77fad20cc2f4b578036p@chr6:140771120..140771128, +
1.78e-29FFCP PHASE1:Hg19::chr2:234862436..234862439,+#_39df5efeecaef77fad20cc2f4b578036p16@TRPM8
1.78e-29FFCP PHASE1:Hg19::chr1:100110807..100110818,+#_39df5efeecaef77fad20cc2f4b578036p@chr1:100110807..100110818, +
1.78e-29FFCP PHASE1:Hg19::chr16:50553120..50553126,-#_39df5efeecaef77fad20cc2f4b578036p@chr16:50553120..50553126, -