Personal tools

Difference between revisions of "DOID:8552"

From FANTOM5_SSTAR

Jump to: navigation, search
 
Line 13: Line 13:
 
|located_in=
 
|located_in=
 
|name=chronic myeloid leukemia
 
|name=chronic myeloid leukemia
|namespace=disease_ontology
+
|namespace=FANTOM
 
|obo_creation_date=
 
|obo_creation_date=
 
|part_of=
 
|part_of=

Latest revision as of 07:52, 12 September 2014

Name:chronic myeloid leukemia
Namespace:FANTOM
Xrefs:
links:

ICD9CM:205.1
MSH:D015464
NCI:C3174
OMIM:608232
SNOMEDCT_2010_1_31:154592009
SNOMEDCT_2010_1_31:188735005
SNOMEDCT_2010_1_31:63364005
SNOMEDCT_2010_1_31:92818009

UMLS_CUI:C0023473
Synonyms: "chronic myelogenous leukemia, no ICD-O subtype (morphologic abnormality)" EXACT [SNOMEDCT_2005_07_31:63364005]
"chronic myeloid leukaemia" EXACT [SNOMEDCT_2005_07_31:154592009]
"chronic myeloid leukemia in remission" EXACT []
"chronic myeloid leukemia in remission (disorder)" EXACT [SNOMEDCT_2005_07_31:92817004]
"chronic myeloid leukemia NOS (disorder)" EXACT [SNOMEDCT_2005_07_31:188735005]
"chronic myeloid leukemia without mention of remission" EXACT []
"chronic myeloid leukemia, disease (disorder)" EXACT [SNOMEDCT_2005_07_31:92818009]
"CML" EXACT [CSP2005:2004-1700]
"CML - chronic Myelogenous Leukemia" EXACT [NCI2004_11_17:C3174]
"CML in Remission" EXACT [NCI2004_11_17:C3589]
"Myeloid Leukemia, chronic" EXACT [MTH:NOCODE]
Comments:OMIM mapping confirmed by DO. [SN].
Alt_id: DOID:8551
DOID:8606

Ontology association
Each term has an is_a parent in the Disease Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to DISEASE ontologies.

link to ontology dataset
data


Parents

is_a:DOID:8692(myeloid leukemia)



Children


is a:FF:10766-110F1 (chronic myelogenous leukemia (CML) cell line:MEG-A2),FF:10769-110F4 ()


Ontology Tree: Loaded from BioPortal

FF samples

Human (Homo sapiens)

Mouse (Mus musculus)

Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with DOID:8552 (chronic myeloid leukemia), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE1:Hg19::chr11:119994013..119994021,-#_d6a39d8ba9edb33f1f1d6362231178abp50@TRIM29
5.42e-195FFCP PHASE2:Hg19::chr11:119994013..119994021,-#_d6a39d8ba9edb33f1f1d6362231178abp50@TRIM29
9.37e-99FFCP PHASE1:Hg19::chr11:59866802..59866805,-#_e1a926889fe3875f9d7838bf0a373219p@chr11:59866802..59866805, -
9.37e-99FFCP PHASE2:Hg19::chr11:59866802..59866805,-#_e1a926889fe3875f9d7838bf0a373219p@chr11:59866802..59866805, -
2.55e-98FFCP PHASE1:Hg19::chr11:66469256..66469259,-#_a4bc0d72186e06bb8f9a0fcdf8d14702p@chr11:66469256..66469259, -
2.55e-98FFCP PHASE2:Hg19::chr11:66469256..66469259,-#_a4bc0d72186e06bb8f9a0fcdf8d14702p@chr11:66469256..66469259, -
1.23e-66FFCP PHASE2:Hg19::chr3:195603532..195603537,-#_a37c994cd023b9090a89e95d76f5e066p30@TNK2
1.23e-66FFCP PHASE1:Hg19::chr11:13804110..13804121,-#_a37c994cd023b9090a89e95d76f5e066p@chr11:13804110..13804121, -
1.23e-66FFCP PHASE1:Hg19::chr13:52569530..52569556,-#_a37c994cd023b9090a89e95d76f5e066p@chr13:52569530..52569556, -
1.23e-66FFCP PHASE2:Hg19::chr11:13804110..13804121,-#_a37c994cd023b9090a89e95d76f5e066p@chr11:13804110..13804121, -
1.23e-66FFCP PHASE2:Hg19::chr13:52569530..52569556,-#_a37c994cd023b9090a89e95d76f5e066p@chr13:52569530..52569556, -
1.23e-66FFCP PHASE1:Hg19::chr3:195603532..195603537,-#_a37c994cd023b9090a89e95d76f5e066p30@TNK2
2.39e-66FFCP PHASE2:Hg19::chr10:127505042..127505063,-#_040a89978addb73db375564d08ace6f9p8@UROS
2.39e-66FFCP PHASE1:Hg19::chr10:127505042..127505063,-#_040a89978addb73db375564d08ace6f9p8@UROS
2.39e-66FFCP PHASE1:Hg19::chr1:236205360..236205375,-#_040a89978addb73db375564d08ace6f9p@chr1:236205360..236205375, -
2.39e-66FFCP PHASE2:Hg19::chr1:236205360..236205375,-#_040a89978addb73db375564d08ace6f9p@chr1:236205360..236205375, -
4.66e-66FFCP PHASE2:Hg19::chr5:91016062..91016069,+#_5949dad40a9d7e48e1836c20e14be7dep@chr5:91016062..91016069, +
4.66e-66FFCP PHASE1:Hg19::chr11:5264728..5264739,-#_5949dad40a9d7e48e1836c20e14be7dep5@HBBP1
4.66e-66FFCP PHASE1:Hg19::chr5:91016062..91016069,+#_5949dad40a9d7e48e1836c20e14be7dep@chr5:91016062..91016069, +
4.66e-66FFCP PHASE2:Hg19::chr11:5264728..5264739,-#_5949dad40a9d7e48e1836c20e14be7dep5@HBBP1
1.46e-50FFCP PHASE1:Hg19::chr7:150654795..150654806,-#_fd0cb77100dbffab3ac58d9f5fbe40aap@chr7:150654795..150654806, -
1.46e-50FFCP PHASE2:Hg19::chr7:150654795..150654806,-#_fd0cb77100dbffab3ac58d9f5fbe40aap@chr7:150654795..150654806, -
1.46e-50FFCP PHASE1:Hg19::chr1:6214945..6214961,-#_fd0cb77100dbffab3ac58d9f5fbe40aap@chr1:6214945..6214961, -
1.46e-50FFCP PHASE2:Hg19::chr1:6214945..6214961,-#_fd0cb77100dbffab3ac58d9f5fbe40aap@chr1:6214945..6214961, -
2.42e-50FFCP PHASE2:Hg19::chr6:132000668..132000670,+#_9ac2a84173ac1f197315f23db3b99b98p@chr6:132000668..132000670, +
2.42e-50FFCP PHASE1:Hg19::chr11:36119908..36119916,+#_9ac2a84173ac1f197315f23db3b99b98p7@LDLRAD3
2.42e-50FFCP PHASE2:Hg19::chr11:36119908..36119916,+#_9ac2a84173ac1f197315f23db3b99b98p7@LDLRAD3
2.42e-50FFCP PHASE1:Hg19::chr6:132000668..132000670,+#_9ac2a84173ac1f197315f23db3b99b98p@chr6:132000668..132000670, +
3.99e-50FFCP PHASE2:Hg19::chr4:175439176..175439186,-#_dfe9f8fd1d02af1c9ad8f3f8bd9ac237p@chr4:175439176..175439186, -
3.99e-50FFCP PHASE1:Hg19::chr1:25747423..25747428,-#_dfe9f8fd1d02af1c9ad8f3f8bd9ac237p3@RHCE
3.99e-50FFCP PHASE2:Hg19::chr1:25747423..25747428,-#_dfe9f8fd1d02af1c9ad8f3f8bd9ac237p3@RHCE
3.99e-50FFCP PHASE1:Hg19::chr4:175439176..175439186,-#_dfe9f8fd1d02af1c9ad8f3f8bd9ac237p@chr4:175439176..175439186, -
6.58e-50FFCP PHASE1:Hg19::chr11:36119758..36119765,+#_f13ad4fec0ce597ff273b4eed267f8acp9@LDLRAD3
6.58e-50FFCP PHASE2:Hg19::chr11:36119758..36119765,+#_f13ad4fec0ce597ff273b4eed267f8acp9@LDLRAD3
6.62e-41FFCP PHASE1:Hg19::chr13:52568084..52568091,-#_e1f792dbb2f9f823ffdb95b3be222bc8p@chr13:52568084..52568091, -
6.62e-41FFCP PHASE2:Hg19::chr13:52568084..52568091,-#_e1f792dbb2f9f823ffdb95b3be222bc8p@chr13:52568084..52568091, -
6.62e-41FFCP PHASE1:Hg19::chr11:5264923..5264932,-#_e1f792dbb2f9f823ffdb95b3be222bc8p6@HBBP1
6.62e-41FFCP PHASE2:Hg19::chr11:5264923..5264932,-#_e1f792dbb2f9f823ffdb95b3be222bc8p6@HBBP1
9.91e-41FFCP PHASE2:Hg19::chr11:36119803..36119812,+#_0bb25e852fd7d29f66be25497ca958c2p6@LDLRAD3
9.91e-41FFCP PHASE1:Hg19::chrX:81069119..81069129,+#_0bb25e852fd7d29f66be25497ca958c2p@chrX:81069119..81069129, +
9.91e-41FFCP PHASE2:Hg19::chr2:190448096..190448099,-#_0bb25e852fd7d29f66be25497ca958c2p15@SLC40A1
9.91e-41FFCP PHASE1:Hg19::chr2:190448096..190448099,-#_0bb25e852fd7d29f66be25497ca958c2p15@SLC40A1
9.91e-41FFCP PHASE1:Hg19::chrX:109564494..109564506,-#_0bb25e852fd7d29f66be25497ca958c2p@chrX:109564494..109564506, -
9.91e-41FFCP PHASE2:Hg19::chrX:109564494..109564506,-#_0bb25e852fd7d29f66be25497ca958c2p@chrX:109564494..109564506, -
9.91e-41FFCP PHASE1:Hg19::chr11:36119803..36119812,+#_0bb25e852fd7d29f66be25497ca958c2p6@LDLRAD3
9.91e-41FFCP PHASE2:Hg19::chrX:81069119..81069129,+#_0bb25e852fd7d29f66be25497ca958c2p@chrX:81069119..81069129, +
1.48e-40FFCP PHASE1:Hg19::chr10:17462911..17462917,-#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr10:17462911..17462917, -
1.48e-40FFCP PHASE1:Hg19::chr3:55001120..55001131,-#_96de7cb401c3b6de6a3f72b1fb42d2dfp6@LRTM1
1.48e-40FFCP PHASE2:Hg19::chr10:17462911..17462917,-#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr10:17462911..17462917, -
1.48e-40FFCP PHASE2:Hg19::chr5:134812717..134812721,+#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr5:134812717..134812721, +
1.48e-40FFCP PHASE2:Hg19::chr3:55001120..55001131,-#_96de7cb401c3b6de6a3f72b1fb42d2dfp6@LRTM1
1.48e-40FFCP PHASE2:Hg19::chr5:3778511..3778555,+#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr5:3778511..3778555, +
1.48e-40FFCP PHASE1:Hg19::chr4:175412395..175412407,-#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr4:175412395..175412407, -
1.48e-40FFCP PHASE1:Hg19::chr5:3778511..3778555,+#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr5:3778511..3778555, +
1.48e-40FFCP PHASE1:Hg19::chr5:134812717..134812721,+#_96de7cb401c3b6de6a3f72b1fb42d2df+, p@chr5:134812717..134812721
1.48e-40FFCP PHASE2:Hg19::chr4:175412395..175412407,-#_96de7cb401c3b6de6a3f72b1fb42d2dfp@chr4:175412395..175412407, -
2.21e-40FFCP PHASE1:Hg19::chr8:55013587..55013594,-#_975a805650b1bcc92ad75c8440954cafp@chr8:55013587..55013594, -
2.21e-40FFCP PHASE1:Hg19::chr11:36119770..36119780,+#_975a805650b1bcc92ad75c8440954cafp8@LDLRAD3
2.21e-40FFCP PHASE2:Hg19::chr8:55013587..55013594,-#_975a805650b1bcc92ad75c8440954cafp@chr8:55013587..55013594, -
2.21e-40FFCP PHASE2:Hg19::chr11:36119770..36119780,+#_975a805650b1bcc92ad75c8440954cafp8@LDLRAD3
3.3e-40FFCP PHASE1:Hg19::chr13:109248291..109248311,+#_a38e10d8d12a924b7efef4fb0e2248f1p10@MYO16
3.3e-40FFCP PHASE1:Hg19::chr11:57154881..57154893,+#_a38e10d8d12a924b7efef4fb0e2248f1p1@CU675194
3.3e-40FFCP PHASE2:Hg19::chr13:109248291..109248311,+#_a38e10d8d12a924b7efef4fb0e2248f1p10@MYO16
3.3e-40FFCP PHASE2:Hg19::chr11:57154881..57154893,+#_a38e10d8d12a924b7efef4fb0e2248f1p1@CU675194
3.3e-40FFCP PHASE2:Hg19::chr10:129780357..129780368,+#_a38e10d8d12a924b7efef4fb0e2248f1p@chr10:129780357..129780368, +
3.3e-40FFCP PHASE1:Hg19::chr10:129780357..129780368,+#_a38e10d8d12a924b7efef4fb0e2248f1p@chr10:129780357..129780368, +
3.3e-40FFCP PHASE1:Hg19::chr8:55013619..55013630,-#_a38e10d8d12a924b7efef4fb0e2248f1p@chr8:55013619..55013630, -
3.3e-40FFCP PHASE2:Hg19::chr8:55013619..55013630,-#_a38e10d8d12a924b7efef4fb0e2248f1p@chr8:55013619..55013630, -
1.84e-34FFCP PHASE2:Hg19::chr12:110211298..110211309,-#_bd525fad8b1c919ea8006b8377513a54p1@ENST00000541723
1.84e-34FFCP PHASE1:Hg19::chr11:59876093..59876098,-#_bd525fad8b1c919ea8006b8377513a54p@chr11:59876093..59876098, -
1.84e-34FFCP PHASE2:Hg19::chr11:59876093..59876098,-#_bd525fad8b1c919ea8006b8377513a54p@chr11:59876093..59876098, -
1.84e-34FFCP PHASE1:Hg19::chr12:110211298..110211309,-#_bd525fad8b1c919ea8006b8377513a54p1@ENST00000541723
2.58e-34FFCP PHASE1:Hg19::chr11:128132940..128132950,+#_9db85212ac53a057aec0c02d367dc9f6p@chr11:128132940..128132950, +
2.58e-34FFCP PHASE1:Hg19::chr12:16968439..16968442,-#_9db85212ac53a057aec0c02d367dc9f6p@chr12:16968439..16968442, -
2.58e-34FFCP PHASE2:Hg19::chr1:35309235..35309266,-#_9db85212ac53a057aec0c02d367dc9f6p@chr1:35309235..35309266, -
2.58e-34FFCP PHASE1:Hg19::chr2:68524697..68524699,-#_9db85212ac53a057aec0c02d367dc9f6p12@CNRIP1
2.58e-34FFCP PHASE2:Hg19::chr6:156941231..156941245,-#_9db85212ac53a057aec0c02d367dc9f6p@chr6:156941231..156941245, -
2.58e-34FFCP PHASE2:Hg19::chr11:128132940..128132950,+#_9db85212ac53a057aec0c02d367dc9f6p@chr11:128132940..128132950, +
2.58e-34FFCP PHASE1:Hg19::chr6:156941231..156941245,-#_9db85212ac53a057aec0c02d367dc9f6p@chr6:156941231..156941245, -
2.58e-34FFCP PHASE2:Hg19::chr6:39160057..39160060,-#_9db85212ac53a057aec0c02d367dc9f6p@chr6:39160057..39160060, -
2.58e-34FFCP PHASE1:Hg19::chr1:35309235..35309266,-#_9db85212ac53a057aec0c02d367dc9f6p@chr1:35309235..35309266, -
2.58e-34FFCP PHASE2:Hg19::chr2:190448106..190448113,-#_9db85212ac53a057aec0c02d367dc9f6p14@SLC40A1
2.58e-34FFCP PHASE1:Hg19::chr2:190448106..190448113,-#_9db85212ac53a057aec0c02d367dc9f6p14@SLC40A1
2.58e-34FFCP PHASE1:Hg19::chr6:39160057..39160060,-#_9db85212ac53a057aec0c02d367dc9f6p@chr6:39160057..39160060, -
2.58e-34FFCP PHASE2:Hg19::chr12:16968439..16968442,-#_9db85212ac53a057aec0c02d367dc9f6p@chr12:16968439..16968442, -
2.58e-34FFCP PHASE2:Hg19::chr2:68524697..68524699,-#_9db85212ac53a057aec0c02d367dc9f6p12@CNRIP1
3.61e-34FFCP PHASE1:Hg19::chr1:19939761..19939796,-#_c9f5da2d8b836a5a1a933701d0629579p@chr1:19939761..19939796, -
3.61e-34FFCP PHASE1:Hg19::chr4:139694701..139694704,+#_c9f5da2d8b836a5a1a933701d0629579p1@ENST00000502606
3.61e-34FFCP PHASE2:Hg19::chr1:19939761..19939796,-#_c9f5da2d8b836a5a1a933701d0629579p@chr1:19939761..19939796, -
3.61e-34FFCP PHASE2:Hg19::chr19:17392513..17392520,+#_c9f5da2d8b836a5a1a933701d0629579p5@ANKLE1
3.61e-34FFCP PHASE1:Hg19::chr19:17392513..17392520,+#_c9f5da2d8b836a5a1a933701d0629579p5@ANKLE1
3.61e-34FFCP PHASE2:Hg19::chr4:139694701..139694704,+#_c9f5da2d8b836a5a1a933701d0629579p1@ENST00000502606
5.05e-34FFCP PHASE2:Hg19::chr4:74281935..74281942,+#_fc51a8c22ce3e421c50fd7d36ffe10e7p34@ALB
5.05e-34FFCP PHASE1:Hg19::chr4:74281935..74281942,+#_fc51a8c22ce3e421c50fd7d36ffe10e7p34@ALB
5.05e-34FFCP PHASE1:Hg19::chr8:141312919..141312935,-#_fc51a8c22ce3e421c50fd7d36ffe10e7p8@TRAPPC9
5.05e-34FFCP PHASE2:Hg19::chr9:135730367..135730374,-#_fc51a8c22ce3e421c50fd7d36ffe10e7p@chr9:135730367..135730374, -
5.05e-34FFCP PHASE2:Hg19::chr8:141312919..141312935,-#_fc51a8c22ce3e421c50fd7d36ffe10e7p8@TRAPPC9
5.05e-34FFCP PHASE1:Hg19::chr9:135730367..135730374,-#_fc51a8c22ce3e421c50fd7d36ffe10e7p@chr9:135730367..135730374, -
7.06e-34FFCP PHASE2:Hg19::chr6:29447609..29447623,+#_b329f13b119aae61045347cfd90c9392p@chr6:29447609..29447623, +
7.06e-34FFCP PHASE1:Hg19::chr1:87652214..87652226,+#_b329f13b119aae61045347cfd90c9392p@chr1:87652214..87652226, +