Personal tools

EFO:0000369

From FANTOM5_SSTAR

Revision as of 15:27, 12 September 2014 by Autoedit (talk | contribs) (Created page with "{{EFO |id=EFO:0000369 |is_a=EFO:0000727 |name=compound based treatment |namespace=FANTOM }}")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Name:compound based treatment
Namespace:FANTOM
Definition:{{{def}}}
Xrefs:
links:
{{{xref}}}:[1]
Synonyms: {{{synonym}}}
Comments:{{{comment}}}
Alt_id: {{{alt_id}}}
Subset: {{{subset}}}
Created by:{{{created_by}}}
Creation date:{{{obo_creation_date}}}
Has quality:{{{has_quality}}}


Ontology association <br>Each term has an is_a parent in the Cell ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to Cell ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:EFO:0000727(treatment)
disjoint_from:[[{{{disjoint_from}}}]]()
union_of:[[{{{union_of}}}]]()
derives_from:[[{{{derives_from}}}]]()
develops_from:[[{{{develops_from}}}]]()
has_quality:[[{{{has_quality}}}]]()
located_in:[[{{{located_in}}}]]()
part_of:[[{{{part_of}}}]]()



Children


is a:FF:0000329 (adipogenic induction sample),FF:0000330 (EGF1 treatment sample),FF:0000331 (HRG treatment sample),FF:0000332 (calcification induced with ascorbate and BPG sample),FF:0000333 (medium change sample),FF:0000334 (melanocytic induction sample),FF:0000335 (LPS treatment sample),FF:0000336 (osteogenic induction sample),FF:0000337 (erythropoietin treatment sample),FF:0000338 (hemin treatment sample),FF:0000339 (FGF2 treatment sample),FF:0000340 (IL1-beta treatment sample),FF:0000341 (Vegfc treatment sample),FF:0000342 (T-cell induction sample),FF:0000409 (T cell expansion sample),FF:0000627 (RANK ligand treatment sample),FF:0000629 (IFN and N-hexane treatment sample),FF:0000630 (beta-glucan treatment sample),FF:0000631 (trehalose dimycolate (TDM) treatment sample),FF:0000636 (IL-2 treatment sample),FF:0000637 (IL-33 treatment sample),FF:0000644 (trophoblast cell line differentiation sample),FF:0000645 (tracheal ciliated cell differentiation sample),FF:0000651 (cardiomyocyte differentiation treatment sample),FF:11844-124H8 ()

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)


FF samples<br>It includes FANTOM5 samples that overlay the Cell ontology.




Enrichment analysis: top 100 FFCP enriched with this ontology termTOP 100 FANTOM5 Cage Peaks enriched with EFO:0000369 (compound based treatment), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results for this cluster








"{{{obo_creation_date}}}" contains an extrinsic dash or other characters that are invalid for a date interpretation.