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{{f5samples
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0000956,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001890,UBERON:0001893,UBERON:0001950,UBERON:0002021,UBERON:0002050,UBERON:0002346,UBERON:0002532,UBERON:0002616,UBERON:0002619,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007135,UBERON:0007284
|DRA_sample_Accession=CAGE@SAMD00005049
|accession_numbers=CAGE;DRX008693;DRR009565;DRZ000990;DRZ002375;DRZ012340;DRZ013725
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0000922,UBERON:0000955,UBERON:0002021,UBERON:0000956,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0002619,UBERON:0001062,UBERON:0000480,UBERON:0002616,UBERON:0002780,UBERON:0002020,UBERON:0010317,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0000203,UBERON:0001950
|ancestors_in_cell_lineage_facet=
|ancestors_in_cell_lineage_facet=
|ancestors_in_disease_facet=
|ancestors_in_disease_facet=
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000999,FF:0000004,FF:0010073
|comment=
|comment=
|created_by=
|created_by=
|creation_date=
|creation_date=
|data_phase=2
|datafreeze_phase=2
|def=
|def=
|expression_enrichment_score=chr2:5832508..5832524,+!p1@SOX11!2.71!515.23!SOX11;;chr7:31380292..31380351,-!p1@NEUROD6!2.52!327.95!NEUROD6;;chr17:37764128..37764258,-!p1@NEUROD2!2.49!305.51!NEUROD2;;chrX:25034067..25034088,-!p1@ARX!2.46!287.11!ARX;;chr14:29235961..29236008,+!p1@FOXG1!2.45!279.30!FOXG1;;chr2:2334997..2335053,-!p1@MYT1L!2.41!254.34!MYT1L;;chr1:244214577..244214593,+!p1@ZNF238!2.33!210.98!ZNF238;;chr2:5832493..5832507,+!p2@SOX11!2.29!193.84!SOX11;;chr2:162272785..162272836,+!p1@TBR1!2.28!188.30!TBR1;;chr5:88178983..88179012,-!p1@MEF2C!2.25!1287.58!MEF2C;;chr9:77112244..77112262,+!p1@RORB!2.21!181.24!RORB;;chr2:200322229..200322251,-!p3@SATB2!2.16!143.93!SATB2;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.14!136.12!POU3F3;;chr4:113437332..113437337,-!p1@NEUROG2!2.11!129.31!NEUROG2;;chr2:145277882..145277967,-!p3@ZEB2!2.05!188.55!ZEB2;;chr4:81118647..81118666,+!p1@PRDM8!2.03!138.89!PRDM8;;chr8:65492756..65492768,+!p2@BHLHE22!2.03!107.13!BHLHE22;;chr14:29234581..29234601,+!p2@FOXG1!2.02!103.60!FOXG1;;chr9:126773880..126773895,+!p2@LHX2!2.00!99.32!LHX2;;chr8:93107451..93107468,-!p2@RUNX1T1!1.92!82.18!RUNX1T1;;chr21:34442439..34442455,+!p1@OLIG1!1.91!81.17!OLIG1;;chr2:200322723..200322739,-!p6@SATB2!1.88!75.12!SATB2;;chr2:2335109..2335134,-!p2@MYT1L!1.88!74.36!MYT1L;;chr2:162272889..162272915,+!p2@TBR1!1.87!73.60!TBR1;;chr1:151032922..151032951,+!p2@MLLT11!1.86!114.69!MLLT11;;chr5:88179271..88179286,-!p7@MEF2C!1.86!71.84!MEF2C;;chr19:38720294..38720348,-!p1@DPF1!1.84!84.44!DPF1;;chr8:93115274..93115323,-!p4@RUNX1T1!1.84!68.82!RUNX1T1;;chr9:126774018..126774055,+!p1@LHX2!1.81!64.03!LHX2;;chr5:88179017..88179046,-!p2@MEF2C!1.79!229.89!MEF2C;;chr19:13135582..13135600,+!p3@NFIX!1.77!57.47!NFIX;;chr2:200320768..200320800,-!p4@SATB2!1.77!57.22!SATB2;;chr12:103351444..103351461,+!p1@ASCL1!1.76!56.21!ASCL1;;chr2:16080659..16080685,+!p1@MYCN!1.72!51.93!MYCN;;chr1:2461692..2461710,-!p1@HES5!1.71!50.41!HES5;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.71!50.16!POU3F3;;chr3:181429704..181429722,+!p1@SOX2!1.71!49.91!SOX2;;chr1:244219775..244219893,+!p2@ZNF238!1.69!64.53!ZNF238;;chr18:53070846..53070902,-!p6@TCF4!1.69!48.40!TCF4;;chr2:200322259..200322280,-!p5@SATB2!1.69!47.89!SATB2;;chr8:93107696..93107716,-!p8@RUNX1T1!1.69!47.64!RUNX1T1;;chr14:29236269..29236285,+!p3@FOXG1!1.66!44.62!FOXG1;;chr15:37392724..37392757,-!p1@MEIS2!1.65!193.34!MEIS2;;chr19:13134772..13134822,+!p2@NFIX!1.65!63.52!NFIX;;chr12:24102576..24102623,-!p2@SOX5!1.65!43.61!SOX5;;chr2:172967621..172967637,-!p1@DLX2!1.64!111.42!DLX2;;chr2:200325204..200325243,-!p7@SATB2!1.64!43.10!SATB2;;chr2:166428839..166428859,+!p2@CSRNP3!1.64!42.85!CSRNP3;;chr20:20348740..20348757,+!p1@INSM1!1.64!42.35!INSM1;;chr5:88179230..88179270,-!p4@MEF2C!1.63!78.65!MEF2C;;chrX:84498989..84499003,+!p1@ZNF711!1.63!56.46!ZNF711;;chr7:96654133..96654150,-!p1@DLX5!1.63!41.34!DLX5;;chr14:33403881..33403924,+!p1@NPAS3!1.62!40.58!NPAS3;;chr2:145277640..145277771,-!p1@ZEB2!1.61!500.87!ZEB2;;chr9:20621834..20621884,-!p5@MLLT3!1.60!39.07!MLLT3;;chr21:34398234..34398250,+!p1@OLIG2!1.59!38.31!OLIG2;;chr2:162272716..162272753,+!p3@TBR1!1.59!37.81!TBR1;;chr3:24536253..24536328,-!p1@THRB!1.58!68.31!THRB;;chr9:20621927..20621996,-!p3@MLLT3!1.58!61.00!MLLT3;;chr5:88179195..88179224,-!p3@MEF2C!1.58!57.22!MEF2C;;chr6:21593973..21593988,+!p1@SOX4!1.57!1224.82!SOX4;;chr2:172950227..172950249,+!p2@DLX1!1.57!36.30!DLX1;;chr2:239148671..239148686,-!p1@HES6!1.56!123.52!HES6;;chr2:166326200..166326216,+!p1@CSRNP3!1.56!51.42!CSRNP3;;chrX:82763292..82763317,+!p1@POU3F4!1.56!35.29!POU3F4;;chr8:93074803..93074845,-!p1@RUNX1T1!1.56!35.04!RUNX1T1;;chr15:80696703..80696754,+!p1@ARNT2!1.55!45.12!ARNT2;;chr1:244214611..244214624,+!p4@ZNF238!1.54!33.53!ZNF238;;chr2:200213794..200213807,-!p9@SATB2!1.54!33.53!SATB2;;chr1:151032860..151032918,+!p1@MLLT11!1.53!370.80!MLLT11;;chr2:172949484..172949522,+!p1@DLX1!1.52!31.76!DLX1;;chr18:42260059..42260132,+!p1@SETBP1!1.51!51.42!SETBP1;;chr2:60780753..60780800,-!p1@BCL11A!1.50!144.69!BCL11A;;chr14:29236301..29236317,+!p5@FOXG1!1.50!30.75!FOXG1;;chr9:14314131..14314147,-!p2@NFIB!1.48!156.03!NFIB;;chr19:57352087..57352102,-!p1@PEG3,p1@ZIM2!1.48!28.99!PEG3;;chr1:164528616..164528660,+!p5@PBX1!1.47!57.47!PBX1;;chr11:8102846..8102892,+!p1@TUB!1.47!39.07!TUB;;chr2:2335070..2335098,-!p4@MYT1L!1.47!28.74!MYT1L;;chr6:21597514..21597578,+!p4@SOX4!1.46!46.63!SOX4;;chr12:24715376..24715432,-!p1@SOX5!1.46!35.04!SOX5;;chr12:111471526..111471541,+!p1@CUX2!1.46!27.73!CUX2;;chr1:214161272..214161322,+!p1@PROX1!1.45!38.31!PROX1;;chr6:21594252..21594285,+!p11@SOX4!1.44!29.24!SOX4;;chr8:93115445..93115462,-!p7@RUNX1T1!1.44!26.47!RUNX1T1;;chr2:200323414..200323455,-!p1@SATB2!1.43!54.20!SATB2;;chr6:91006575..91006602,-!p2@BACH2!1.43!37.81!BACH2;;chr5:92919375..92919438,+!p6@NR2F1!1.43!28.23!NR2F1;;chr1:164528410..164528428,+!p1@PBX1!1.42!184.52!PBX1;;chr2:200322654..200322707,-!p2@SATB2!1.42!36.55!SATB2;;chr19:13135731..13135787,+!p10@NFIX!1.42!25.46!NFIX;;chr2:60781201..60781258,-!p3@BCL11A!1.42!25.21!BCL11A;;chr18:52988979..52988993,-!p18@TCF4!1.41!24.45!TCF4;;chr8:93115332..93115360,-!p11@RUNX1T1!1.41!24.45!RUNX1T1;;chr2:60780607..60780624,-!p2@BCL11A!1.40!71.84!BCL11A;;chr6:91006518..91006570,-!p1@BACH2!1.40!54.95!BACH2;;chr1:61548374..61548415,+!p4@NFIA!1.40!44.11!NFIA;;chr8:60031682..60031710,-!p2@TOX!1.39!37.56!TOX;;chr2:175199675..175199688,+!p1@SP9!1.39!23.69!SP9;;chr18:53254566..53254567,-!p8@TCF4!1.37!36.55!TCF4;;chr3:141105705..141105770,+!p4@ZBTB38!1.37!27.22!ZBTB38;;chr18:53068911..53068935,-!p4@TCF4!1.37!25.21!TCF4;;chr1:38512457..38512474,-!p1@POU3F1!1.37!24.45!POU3F1;;chr2:200322213..200322224,-!p14@SATB2!1.37!22.69!SATB2;;chr2:185463247..185463263,+!p1@ZNF804A!1.36!38.57!ZNF804A;;chr5:92919100..92919135,+!p3@NR2F1!1.36!26.72!NR2F1;;chr2:145275982..145276003,-!p7@ZEB2!1.36!21.93!ZEB2;;chr6:21597600..21597664,+!p3@SOX4!1.35!34.79!SOX4;;chr8:65492520..65492554,+!p3@BHLHE22!1.35!21.43!BHLHE22;;chr11:31832862..31832884,-!p2@PAX6!1.35!21.43!PAX6;;chr2:145277792..145277808,-!p15@ZEB2!1.35!21.17!ZEB2;;chr18:53257027..53257052,-!p3@TCF4!1.34!81.17!TCF4;;chr8:93115362..93115391,-!p9@RUNX1T1!1.34!20.67!RUNX1T1;;chr15:37392616..37392638,-!p2@MEIS2!1.33!63.02!MEIS2;;chr3:114173720..114173794,-!p6@ZBTB20!1.33!20.42!ZBTB20;;chr9:126774058..126774081,+!p3@LHX2!1.33!20.42!LHX2;;chr8:30890810..30890880,-!p1@PURG!1.33!20.17!PURG;;chr14:29236169..29236216,+!p6@FOXG1!1.33!20.17!FOXG1;;chr14:29236510..29236521,+!p9@FOXG1!1.33!20.17!FOXG1;;chrX:84499081..84499115,+!p2@ZNF711!1.32!28.74!ZNF711;;chrY:21906594..21906622,-!p1@KDM5D!1.32!19.91!KDM5D;;chr2:182545234..182545252,-!p1@NEUROD1!1.32!19.91!NEUROD1;;chr18:42260030..42260055,+!p3@SETBP1!1.31!24.20!SETBP1;;chr7:20826504..20826526,-!p1@SP8!1.31!19.41!SP8;;chr20:657284..657307,-!p1@SCRT2!1.31!19.41!SCRT2;;chr19:58220517..58220583,-!p1@ZNF154!1.30!59.74!ZNF154;;chr1:61548069..61548102,+!p3@NFIA!1.30!44.87!NFIA;;chr5:178368186..178368238,+!p1@ZNF454!1.30!34.03!ZNF454;;chr18:53070913..53070933,-!p16@TCF4!1.30!19.16!TCF4;;chr2:200322711..200322722,-!p10@SATB2!1.30!19.16!SATB2;;chr9:124991204..124991246,-!p1@LHX6!1.30!19.16!LHX6;;chr15:37392094..37392116,-!p6@MEIS2!1.29!22.69!MEIS2;;chr16:52581025..52581072,-!p1@TOX3!1.29!18.65!TOX3;;chr6:21594206..21594221,+!p15@SOX4!1.29!18.40!SOX4;;chr8:93074848..93074871,-!p3@RUNX1T1!1.29!18.40!RUNX1T1;;chr8:93107855..93107901,-!p12@RUNX1T1!1.29!18.40!RUNX1T1;;chr11:125034640..125034655,+!p1@PKNOX2!1.29!18.40!PKNOX2;;chr19:38183208..38183225,-!p1@ZNF781!1.28!22.94!ZNF781;;chr2:200325244..200325264,-!p11@SATB2!1.28!18.15!SATB2;;chr9:109625401..109625458,+!p1@ZNF462!1.27!45.88!ZNF462;;chr5:124082322..124082364,-!p1@ZNF608!1.27!44.36!ZNF608;;chr1:164528942..164528964,+!p11@PBX1!1.27!17.65!PBX1;;chr17:7492684..7492778,-!p2@SOX15!1.26!36.30!SOX15;;chr16:79634595..79634620,-!p2@MAF!1.26!31.00!MAF;;chrX:84499056..84499078,+!p3@ZNF711!1.26!17.39!ZNF711;;chr3:33482052..33482116,-!p2@UBP1!1.25!25.96!UBP1;;chr15:37392703..37392717,-!p8@MEIS2!1.25!23.95!MEIS2;;chr1:164528687..164528711,+!p6@PBX1!1.25!19.41!PBX1;;chr9:14308004..14308041,-!p14@NFIB!1.25!16.89!NFIB;;chr14:58798013..58798071,+!p2@ARID4A!1.25!16.89!ARID4A;;chr8:93107726..93107744,-!p21@RUNX1T1!1.25!16.89!RUNX1T1;;chr5:88119715..88119757,-!p11@MEF2C!1.25!16.64!MEF2C;;chr8:93107638..93107649,-!p22@RUNX1T1!1.25!16.64!RUNX1T1;;chr16:79634624..79634642,-!p1@MAF!1.24!63.02!MAF;;chr9:14314106..14314119,-!p5@NFIB!1.24!28.99!NFIB;;chr1:164528445..164528459,+!p2@PBX1!1.23!49.15!PBX1;;chr15:80696666..80696700,+!p4@ARNT2!1.23!16.13!ARNT2;;chr2:166428861..166428883,+!p3@CSRNP3!1.23!16.13!CSRNP3;;chr1:151032957..151032968,+!p7@MLLT11!1.23!15.88!MLLT11;;chr7:113726357..113726443,+!p1@FOXP2!1.22!26.72!FOXP2;;chr18:53257001..53257015,-!p5@TCF4!1.22!26.72!TCF4;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.22!15.63!POU3F3;;chr8:106330656..106330684,+!p1@ZFPM2!1.21!39.83!ZFPM2;;chr18:56532100..56532130,+!p1@ZNF532!1.21!27.98!ZNF532;;chr5:92918768..92918783,+!p8@NR2F1!1.21!15.38!NR2F1;;chr10:119302232..119302265,+!p1@EMX2!1.21!15.38!EMX2;;chr18:52988952..52988965,-!p23@TCF4!1.21!15.12!TCF4;;chr9:20622444..20622468,-!p2@MLLT3!1.20!47.39!MLLT3;;chr11:8102819..8102845,+!p3@TUB!1.20!18.40!TUB;;chr15:80733570..80733659,+!p2@ARNT2!1.20!14.87!ARNT2;;chr16:51185172..51185197,-!p1@SALL1!1.20!14.87!SALL1;;chr2:162273241..162273253,+!p4@TBR1!1.20!14.87!TBR1;;chr3:181429741..181429767,+!p2@SOX2!1.20!14.87!SOX2;;chr9:3525910..3525955,-!p4@RFX3!1.19!42.85!RFX3;;chr14:29237009..29237049,+!p4@FOXG1!1.19!14.62!FOXG1;;chr1:42384343..42384380,-!p4@HIVEP3!1.19!14.37!HIVEP3;;chr9:3525867..3525902,-!p3@RFX3!1.18!48.40!RFX3;;chr1:164528975..164528998,+!p13@PBX1!1.18!14.12!PBX1;;chr1:164528384..164528409,+!p3@PBX1!1.17!43.10!PBX1;;chr9:14313893..14313908,-!p7@NFIB!1.17!19.91!NFIB;;chr2:145275947..145275981,-!p10@ZEB2!1.17!13.86!ZEB2;;chr6:99282592..99282616,+!p3@POU3F2!1.17!13.86!POU3F2;;chr3:21792682..21792720,-!p1@ZNF385D!1.16!13.61!ZNF385D;;chrX:139587228.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|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0002021;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
|fonse_cell_line=
|fonse_cell_line=
|fonse_cell_line_closure=
|fonse_cell_line_closure=
Line 34: Line 41:
|fonse_treatment_closure=
|fonse_treatment_closure=
|has_quality=
|has_quality=
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg19.nobarcode.bam
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg19.ctss.bed.gz
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg19.nobarcode.rdna.fa.gz
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg38.nobarcode.bam
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/occipital%2520lobe%252c%2520fetal%252c%2520donor1.CNhs11784.10073-102A1.hg38.nobarcode.ctss.bed.gz
|id=FF:10073-102A1
|id=FF:10073-102A1
|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010073
|is_a=EFO:0002091;;FF:0010073
|is_obsolete=
|library_id=CNhs11784
|library_id_phase_based=2:CNhs11784
|microRNAs=
|microRNAs_nn=
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10073
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10073
|name=occipital lobe, fetal, donor1
|name=occipital lobe, fetal, donor1
|namespace=FANTOM5
|namespace=FANTOM5
Line 41: Line 60:
|profile_cagescan=,,,
|profile_cagescan=,,,
|profile_hcage=CNhs11784,LSID820,release009,COMPLETED
|profile_hcage=CNhs11784,LSID820,release009,COMPLETED
|profile_rnaseq=,,,
|profile_rnaseq=
|profile_srnaseq=,,,
|profile_srnaseq=,,,
|refex=http://refex.dbcls.jp/genelist.php?lang
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|rna_box=102
|rna_box=102
|rna_catalog_number=Cat:RtHFN: Brain occiptal lobe
|rna_catalog_number=Cat:RtHFN: Brain occiptal lobe
Line 56: Line 78:
|rna_weight_ug=50
|rna_weight_ug=50
|sample_age=
|sample_age=
|sample_category=tissues
|sample_cell_catalog=NA
|sample_cell_catalog=NA
|sample_cell_line=
|sample_cell_line=
Line 68: Line 91:
|sample_ethnicity=A?
|sample_ethnicity=A?
|sample_experimental_condition=
|sample_experimental_condition=
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.65675550441188e-239!GO:0043226;organelle;5.98879607260882e-139!GO:0043229;intracellular organelle;2.19437771873927e-138!GO:0043227;membrane-bound organelle;9.30078422615105e-133!GO:0043231;intracellular membrane-bound organelle;1.19213560338376e-132!GO:0005737;cytoplasm;2.59184350536691e-112!GO:0044422;organelle part;2.57325804217918e-82!GO:0044446;intracellular organelle part;2.99350667126404e-81!GO:0044444;cytoplasmic part;1.72294140028677e-72!GO:0032991;macromolecular complex;1.0110123654588e-70!GO:0005634;nucleus;4.39172733262e-62!GO:0005515;protein binding;1.18072070198186e-56!GO:0003723;RNA binding;1.80551874694723e-54!GO:0030529;ribonucleoprotein complex;9.96510025620041e-54!GO:0016043;cellular component organization and biogenesis;2.20610291425279e-53!GO:0043170;macromolecule metabolic process;1.56914162717703e-51!GO:0044238;primary metabolic process;3.67785425545409e-49!GO:0044237;cellular metabolic process;1.61866087106885e-46!GO:0044428;nuclear part;6.2687265177243e-46!GO:0043283;biopolymer metabolic process;4.39451292621713e-42!GO:0043234;protein complex;4.71063958504092e-38!GO:0043233;organelle lumen;4.78651938688558e-38!GO:0031974;membrane-enclosed lumen;4.78651938688558e-38!GO:0010467;gene expression;8.91202606711609e-35!GO:0033036;macromolecule localization;8.91202606711609e-35!GO:0015031;protein transport;1.99080490488171e-34!GO:0031090;organelle membrane;1.60825652305309e-32!GO:0006396;RNA processing;1.60825652305309e-32!GO:0005840;ribosome;1.27272795533333e-31!GO:0008104;protein localization;2.75593962459127e-31!GO:0005739;mitochondrion;2.75593962459127e-31!GO:0016071;mRNA metabolic process;4.21615705117993e-31!GO:0045184;establishment of protein localization;9.54014630278625e-31!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.39921052012577e-29!GO:0006996;organelle organization and biogenesis;1.64795277285215e-29!GO:0008380;RNA splicing;1.71015206242541e-29!GO:0046907;intracellular transport;1.23332632612631e-28!GO:0003735;structural constituent of ribosome;5.27754711891606e-28!GO:0031981;nuclear lumen;2.869537308265e-27!GO:0006397;mRNA processing;1.79895779458128e-26!GO:0019538;protein metabolic process;1.83844989937546e-25!GO:0003676;nucleic acid binding;3.40288210859026e-25!GO:0033279;ribosomal subunit;5.11106425542956e-25!GO:0031975;envelope;2.16308006294281e-24!GO:0065003;macromolecular complex assembly;2.25244893772775e-24!GO:0031967;organelle envelope;2.79524707309955e-24!GO:0006412;translation;2.79575322022381e-24!GO:0051649;establishment of cellular localization;3.37309148933812e-24!GO:0051641;cellular localization;5.31244661534391e-24!GO:0044429;mitochondrial part;7.25890878148425e-24!GO:0044267;cellular protein metabolic process;1.46586763042043e-22!GO:0044260;cellular macromolecule metabolic process;3.75682804266527e-22!GO:0022607;cellular component assembly;4.28454820781397e-22!GO:0006886;intracellular protein transport;7.55462980975978e-22!GO:0005829;cytosol;2.13520475629156e-21!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.4723320666849e-21!GO:0043228;non-membrane-bound organelle;9.72858353218653e-20!GO:0043232;intracellular non-membrane-bound organelle;9.72858353218653e-20!GO:0016070;RNA metabolic process;1.0702786174166e-19!GO:0006512;ubiquitin cycle;1.55393771159106e-19!GO:0044445;cytosolic part;2.12254909984383e-19!GO:0006119;oxidative phosphorylation;2.56096403747106e-19!GO:0005681;spliceosome;1.1860609447043e-18!GO:0005794;Golgi apparatus;2.70961639218819e-18!GO:0000166;nucleotide binding;4.78268162842138e-18!GO:0005654;nucleoplasm;1.25297118000516e-17!GO:0016192;vesicle-mediated transport;1.59639464311706e-17!GO:0009059;macromolecule biosynthetic process;4.23237949619471e-17!GO:0016874;ligase activity;2.13687837173408e-16!GO:0005740;mitochondrial envelope;2.21529075123912e-16!GO:0031966;mitochondrial membrane;5.20136141672233e-16!GO:0019866;organelle inner membrane;7.90466160633426e-16!GO:0009058;biosynthetic process;9.31103974063653e-16!GO:0043412;biopolymer modification;1.27023631945944e-15!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.73689156609679e-15!GO:0044451;nucleoplasm part;3.18902006278608e-15!GO:0044455;mitochondrial membrane part;3.95014761492204e-15!GO:0006259;DNA metabolic process;6.15363591288548e-15!GO:0044249;cellular biosynthetic process;1.52124376857485e-14!GO:0016462;pyrophosphatase activity;1.52124376857485e-14!GO:0006325;establishment and/or maintenance of chromatin architecture;1.55260921994488e-14!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;1.84215439142464e-14!GO:0006464;protein modification process;1.84215439142464e-14!GO:0016817;hydrolase activity, acting on acid anhydrides;3.0639368497625e-14!GO:0017111;nucleoside-triphosphatase activity;3.84550916061669e-14!GO:0005743;mitochondrial inner membrane;4.48005957160617e-14!GO:0043687;post-translational protein modification;5.02270091814487e-14!GO:0006323;DNA packaging;1.05357637377033e-13!GO:0005746;mitochondrial respiratory chain;1.6268375431169e-13!GO:0015935;small ribosomal subunit;3.47683527229531e-13!GO:0012505;endomembrane system;3.92250616281948e-13!GO:0050136;NADH dehydrogenase (quinone) activity;9.07484845600681e-13!GO:0003954;NADH dehydrogenase activity;9.07484845600681e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;9.07484845600681e-13!GO:0015934;large ribosomal subunit;9.88203537858795e-13!GO:0032553;ribonucleotide binding;1.12661372700191e-12!GO:0032555;purine ribonucleotide binding;1.12661372700191e-12!GO:0051276;chromosome organization and biogenesis;2.51491863329792e-12!GO:0022618;protein-RNA complex assembly;3.84873091315142e-12!GO:0048193;Golgi vesicle transport;4.80854051981129e-12!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;2.20245717881422e-11!GO:0006511;ubiquitin-dependent protein catabolic process;2.31628912284343e-11!GO:0051603;proteolysis involved in cellular protein catabolic process;2.79166285798156e-11!GO:0031965;nuclear membrane;3.67226255359575e-11!GO:0007399;nervous system development;3.94082822260528e-11!GO:0042775;organelle ATP synthesis coupled electron transport;4.01342360287449e-11!GO:0042773;ATP synthesis coupled electron transport;4.01342360287449e-11!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);4.47603495531578e-11!GO:0019941;modification-dependent protein catabolic process;4.67500092010564e-11!GO:0043632;modification-dependent macromolecule catabolic process;4.67500092010564e-11!GO:0008135;translation factor activity, nucleic acid binding;4.67500092010564e-11!GO:0017076;purine nucleotide binding;5.01715362276625e-11!GO:0006457;protein folding;5.06193268045356e-11!GO:0030964;NADH dehydrogenase complex (quinone);6.19754956548883e-11!GO:0045271;respiratory chain complex I;6.19754956548883e-11!GO:0005747;mitochondrial respiratory chain complex I;6.19754956548883e-11!GO:0044257;cellular protein catabolic process;6.8084977503299e-11!GO:0006605;protein targeting;9.80280118515478e-11!GO:0008639;small protein conjugating enzyme activity;1.14074674028789e-10!GO:0004842;ubiquitin-protein ligase activity;1.47948169643742e-10!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.62536682345632e-10!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.71965964135088e-10!GO:0015630;microtubule cytoskeleton;2.80433307287415e-10!GO:0008565;protein transporter activity;2.83439330427427e-10!GO:0044431;Golgi apparatus part;4.9797934053025e-10!GO:0045045;secretory pathway;6.20406918973622e-10!GO:0000398;nuclear mRNA splicing, via spliceosome;7.34322447582421e-10!GO:0000375;RNA splicing, via transesterification reactions;7.34322447582421e-10!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.34322447582421e-10!GO:0019787;small conjugating protein ligase activity;1.34895001534854e-09!GO:0006333;chromatin assembly or disassembly;1.47655682732654e-09!GO:0006913;nucleocytoplasmic transport;3.16784034759725e-09!GO:0008134;transcription factor binding;3.66510886544595e-09!GO:0044265;cellular macromolecule catabolic process;4.14076647496434e-09!GO:0031980;mitochondrial lumen;5.36851244803951e-09!GO:0005759;mitochondrial matrix;5.36851244803951e-09!GO:0051169;nuclear transport;5.73526795663891e-09!GO:0031982;vesicle;6.20018810976026e-09!GO:0031988;membrane-bound vesicle;6.98771262132185e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;7.21678323845432e-09!GO:0044453;nuclear membrane part;7.27044629727468e-09!GO:0051082;unfolded protein binding;8.56886846648053e-09!GO:0019829;cation-transporting ATPase activity;9.00240338816244e-09!GO:0032559;adenyl ribonucleotide binding;1.15482880568235e-08!GO:0005635;nuclear envelope;1.17439804303422e-08!GO:0003743;translation initiation factor activity;1.51064113093744e-08!GO:0005524;ATP binding;1.65737250394891e-08!GO:0031410;cytoplasmic vesicle;1.68291914226296e-08!GO:0016023;cytoplasmic membrane-bound vesicle;2.08604841426829e-08!GO:0005730;nucleolus;2.14364978718722e-08!GO:0016881;acid-amino acid ligase activity;3.14749940888371e-08!GO:0065004;protein-DNA complex assembly;4.00902247657767e-08!GO:0016568;chromatin modification;4.12507444552955e-08!GO:0005643;nuclear pore;4.47013634764837e-08!GO:0006793;phosphorus metabolic process;5.2983130560656e-08!GO:0006796;phosphate metabolic process;5.2983130560656e-08!GO:0015631;tubulin binding;5.32585353153905e-08!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;5.62243753234595e-08!GO:0016879;ligase activity, forming carbon-nitrogen bonds;5.65918507687548e-08!GO:0000139;Golgi membrane;6.52564181252311e-08!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;1.16359038803977e-07!GO:0030163;protein catabolic process;1.1857707280729e-07!GO:0043285;biopolymer catabolic process;1.29053440982717e-07!GO:0048770;pigment granule;1.33498085142931e-07!GO:0042470;melanosome;1.33498085142931e-07!GO:0030135;coated vesicle;1.44992707804284e-07!GO:0000785;chromatin;1.59858048528023e-07!GO:0006413;translational initiation;1.6547884396263e-07!GO:0016604;nuclear body;1.66719933383095e-07!GO:0032446;protein modification by small protein conjugation;1.80291889331317e-07!GO:0015986;ATP synthesis coupled proton transport;1.98098433279333e-07!GO:0015985;energy coupled proton transport, down electrochemical gradient;1.98098433279333e-07!GO:0006403;RNA localization;2.09003621155951e-07!GO:0030554;adenyl nucleotide binding;3.00411105161505e-07!GO:0006446;regulation of translational initiation;3.20213560637944e-07!GO:0003924;GTPase activity;3.22508255089085e-07!GO:0005761;mitochondrial ribosome;3.73423934356281e-07!GO:0000313;organellar ribosome;3.73423934356281e-07!GO:0007010;cytoskeleton organization and biogenesis;3.8587274966446e-07!GO:0050657;nucleic acid transport;3.8587274966446e-07!GO:0051236;establishment of RNA localization;3.8587274966446e-07!GO:0050658;RNA transport;3.8587274966446e-07!GO:0000502;proteasome complex (sensu Eukaryota);4.6204610862127e-07!GO:0050794;regulation of cellular process;4.79136815037025e-07!GO:0016567;protein ubiquitination;5.58024562547571e-07!GO:0016607;nuclear speck;9.2895248658176e-07!GO:0005874;microtubule;9.39359075141987e-07!GO:0048475;coated membrane;1.01187481679857e-06!GO:0030117;membrane coat;1.01187481679857e-06!GO:0042623;ATPase activity, coupled;1.0276281747746e-06!GO:0017038;protein import;1.11030679934153e-06!GO:0016887;ATPase activity;1.23930620098771e-06!GO:0006334;nucleosome assembly;1.26925038030707e-06!GO:0051186;cofactor metabolic process;1.27558493492156e-06!GO:0007264;small GTPase mediated signal transduction;1.37924187073481e-06!GO:0009060;aerobic respiration;1.58903298843411e-06!GO:0031497;chromatin assembly;1.91488308583458e-06!GO:0006461;protein complex assembly;2.0032531084647e-06!GO:0005694;chromosome;2.11406694656277e-06!GO:0009057;macromolecule catabolic process;2.88627914059018e-06!GO:0050789;regulation of biological process;3.01898800557323e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;3.01898800557323e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;3.01898800557323e-06!GO:0009142;nucleoside triphosphate biosynthetic process;3.15486405125522e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;3.15486405125522e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.16067804083702e-06!GO:0009144;purine nucleoside triphosphate metabolic process;3.16067804083702e-06!GO:0009141;nucleoside triphosphate metabolic process;3.16067804083702e-06!GO:0009199;ribonucleoside triphosphate metabolic process;3.2269682955982e-06!GO:0008287;protein serine/threonine phosphatase complex;3.98973698623597e-06!GO:0032940;secretion by cell;4.01249174152398e-06!GO:0009150;purine ribonucleotide metabolic process;4.30828334616188e-06!GO:0006163;purine nucleotide metabolic process;4.8436520453966e-06!GO:0006754;ATP biosynthetic process;5.06777040918827e-06!GO:0006753;nucleoside phosphate metabolic process;5.06777040918827e-06!GO:0016310;phosphorylation;6.25000690792109e-06!GO:0007049;cell cycle;6.25000690792109e-06!GO:0009152;purine ribonucleotide biosynthetic process;6.44845938316227e-06!GO:0045259;proton-transporting ATP synthase complex;7.04980430316189e-06!GO:0046034;ATP metabolic process;7.21281898749254e-06!GO:0004386;helicase activity;7.50032905931891e-06!GO:0006164;purine nucleotide biosynthetic process;7.62368578339783e-06!GO:0005905;coated pit;8.13944836385095e-06!GO:0009259;ribonucleotide metabolic process;8.61207899345087e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;9.09527493575576e-06!GO:0008017;microtubule binding;9.59488550184476e-06!GO:0051028;mRNA transport;1.0082536292959e-05!GO:0008270;zinc ion binding;1.03291988736326e-05!GO:0043005;neuron projection;1.06466160918077e-05!GO:0044427;chromosomal part;1.13698407803674e-05!GO:0005525;GTP binding;1.24142309057931e-05!GO:0016469;proton-transporting two-sector ATPase complex;1.24142309057931e-05!GO:0045333;cellular respiration;1.36447040204001e-05!GO:0046930;pore complex;1.48486671364605e-05!GO:0019222;regulation of metabolic process;1.48486671364605e-05!GO:0008092;cytoskeletal protein binding;1.48515182209351e-05!GO:0003712;transcription cofactor activity;1.61064759229705e-05!GO:0006974;response to DNA damage stimulus;1.84381264126614e-05!GO:0030120;vesicle coat;1.95312317916199e-05!GO:0030662;coated vesicle membrane;1.95312317916199e-05!GO:0005768;endosome;2.14580006640303e-05!GO:0009260;ribonucleotide biosynthetic process;2.30369896554992e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.38399804376407e-05!GO:0006732;coenzyme metabolic process;2.45313750043265e-05!GO:0000902;cell morphogenesis;2.63008467580655e-05!GO:0032989;cellular structure morphogenesis;2.63008467580655e-05!GO:0048471;perinuclear region of cytoplasm;2.8101479272234e-05!GO:0000245;spliceosome assembly;3.04862501171326e-05!GO:0030182;neuron differentiation;3.52968229299694e-05!GO:0000151;ubiquitin ligase complex;3.76848934041035e-05!GO:0030036;actin cytoskeleton organization and biogenesis;3.76848934041035e-05!GO:0030532;small nuclear ribonucleoprotein complex;4.80205276664242e-05!GO:0006281;DNA repair;4.81268232701134e-05!GO:0015078;hydrogen ion transmembrane transporter activity;5.49543346826954e-05!GO:0005798;Golgi-associated vesicle;5.9204835006088e-05!GO:0006606;protein import into nucleus;5.9204835006088e-05!GO:0005083;small GTPase regulator activity;6.19063201429355e-05!GO:0006350;transcription;6.36156109719677e-05!GO:0044248;cellular catabolic process;6.68725385838198e-05!GO:0006099;tricarboxylic acid cycle;7.02515324260119e-05!GO:0046356;acetyl-CoA catabolic process;7.02515324260119e-05!GO:0065002;intracellular protein transport across a membrane;7.07384914297346e-05!GO:0006888;ER to Golgi vesicle-mediated transport;7.11013378368369e-05!GO:0030030;cell projection organization and biogenesis;8.25938675730808e-05!GO:0048858;cell projection morphogenesis;8.25938675730808e-05!GO:0032990;cell part morphogenesis;8.25938675730808e-05!GO:0051170;nuclear import;8.52787355635351e-05!GO:0003729;mRNA binding;8.54903022321932e-05!GO:0032561;guanyl ribonucleotide binding;9.01643488661928e-05!GO:0019001;guanyl nucleotide binding;9.01643488661928e-05!GO:0015077;monovalent inorganic cation transmembrane transporter activity;9.03744580404448e-05!GO:0043623;cellular protein complex assembly;9.3868978976861e-05!GO:0000904;cellular morphogenesis during differentiation;0.00011883091737883!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.000132823881780493!GO:0004812;aminoacyl-tRNA ligase activity;0.000132823881780493!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.000132823881780493!GO:0008026;ATP-dependent helicase activity;0.000134130878087441!GO:0045786;negative regulation of progression through cell cycle;0.000140632413407133!GO:0005813;centrosome;0.000140733733735311!GO:0048699;generation of neurons;0.000149495080199018!GO:0006084;acetyl-CoA metabolic process;0.000182473779382882!GO:0003697;single-stranded DNA binding;0.0001850959364844!GO:0005769;early endosome;0.000190247169682372!GO:0048666;neuron development;0.000199311319033536!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000199311319033536!GO:0019717;synaptosome;0.000205933906168433!GO:0007017;microtubule-based process;0.000209643350076064!GO:0019899;enzyme binding;0.000210946809209214!GO:0043566;structure-specific DNA binding;0.000229615629433663!GO:0009055;electron carrier activity;0.000232621477356022!GO:0048489;synaptic vesicle transport;0.00023477938577143!GO:0048667;neuron morphogenesis during differentiation;0.000246070207820812!GO:0048812;neurite morphogenesis;0.000246070207820812!GO:0044440;endosomal part;0.00024980139013485!GO:0010008;endosome membrane;0.00024980139013485!GO:0031175;neurite development;0.000255687800841654!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.000261686290476515!GO:0042254;ribosome biogenesis and assembly;0.000262095983916142!GO:0009109;coenzyme catabolic process;0.00026232552708811!GO:0030427;site of polarized growth;0.00028188226525995!GO:0030136;clathrin-coated vesicle;0.000284895172437326!GO:0030426;growth cone;0.000315378206955205!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000328891469042483!GO:0051188;cofactor biosynthetic process;0.000362620370283786!GO:0016044;membrane organization and biogenesis;0.000372165082415814!GO:0043038;amino acid activation;0.00037635872779245!GO:0006418;tRNA aminoacylation for protein translation;0.00037635872779245!GO:0043039;tRNA aminoacylation;0.00037635872779245!GO:0005815;microtubule organizing center;0.00039431297005162!GO:0005875;microtubule associated complex;0.000403919615780501!GO:0016311;dephosphorylation;0.000408607927939817!GO:0022008;neurogenesis;0.000421848691446176!GO:0032774;RNA biosynthetic process;0.000428153238197677!GO:0030029;actin filament-based process;0.0004297318446868!GO:0010468;regulation of gene expression;0.000453757563871659!GO:0006351;transcription, DNA-dependent;0.000454218859201131!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0004842737883412!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.000489753758102616!GO:0015399;primary active transmembrane transporter activity;0.000489753758102616!GO:0005783;endoplasmic reticulum;0.000497236077342437!GO:0007409;axonogenesis;0.000500469665775142!GO:0051726;regulation of cell cycle;0.00050333156126309!GO:0022402;cell cycle process;0.000506448014588498!GO:0006613;cotranslational protein targeting to membrane;0.000524610521373646!GO:0016740;transferase activity;0.000533840312828453!GO:0006414;translational elongation;0.000568293389637351!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000648792415976382!GO:0006752;group transfer coenzyme metabolic process;0.000674681766901503!GO:0051168;nuclear export;0.000703376580367011!GO:0031323;regulation of cellular metabolic process;0.000714367055194279!GO:0030027;lamellipodium;0.000788388964511521!GO:0000074;regulation of progression through cell cycle;0.00079603680101507!GO:0005793;ER-Golgi intermediate compartment;0.00083645468043695!GO:0008654;phospholipid biosynthetic process;0.000838563610445089!GO:0030695;GTPase regulator activity;0.000872302426986173!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000936257570167776!GO:0007269;neurotransmitter secretion;0.000948867591684928!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000948867591684928!GO:0030118;clathrin coat;0.000966937569718291!GO:0051187;cofactor catabolic process;0.000993824049865472!GO:0005667;transcription factor complex;0.00100022996038154!GO:0004674;protein serine/threonine kinase activity;0.00108758668966016!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00126464039440036!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00126464039440036!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00126464039440036!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00127366648772657!GO:0006470;protein amino acid dephosphorylation;0.00133167277783142!GO:0000059;protein import into nucleus, docking;0.00147982291608902!GO:0031252;leading edge;0.00150594879829246!GO:0005770;late endosome;0.00152369121629144!GO:0045449;regulation of transcription;0.00152632989839191!GO:0016363;nuclear matrix;0.00158904506201136!GO:0030425;dendrite;0.00158905272703769!GO:0006891;intra-Golgi vesicle-mediated transport;0.00161430124957168!GO:0006366;transcription from RNA polymerase II promoter;0.00174800818362535!GO:0031901;early endosome membrane;0.00180315007098054!GO:0009108;coenzyme biosynthetic process;0.00192743604418427!GO:0000159;protein phosphatase type 2A complex;0.00193064613863988!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00195957103725792!GO:0046914;transition metal ion binding;0.00198002961312205!GO:0051427;hormone receptor binding;0.00212785402021652!GO:0006399;tRNA metabolic process;0.00212959216463163!GO:0006892;post-Golgi vesicle-mediated transport;0.00214821848828992!GO:0051128;regulation of cellular component organization and biogenesis;0.00222847391561046!GO:0008601;protein phosphatase type 2A regulator activity;0.00223101860476314!GO:0004721;phosphoprotein phosphatase activity;0.00230152685873671!GO:0050767;regulation of neurogenesis;0.00295742039775961!GO:0035257;nuclear hormone receptor binding;0.00320053668234466!GO:0006355;regulation of transcription, DNA-dependent;0.00333149154354842!GO:0019208;phosphatase regulator activity;0.00341130931154746!GO:0007265;Ras protein signal transduction;0.00345459675842377!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.00348624716396817!GO:0008250;oligosaccharyl transferase complex;0.00358996413283427!GO:0004576;oligosaccharyl transferase activity;0.00365979446168994!GO:0006650;glycerophospholipid metabolic process;0.00366479766447528!GO:0051087;chaperone binding;0.00382332471981424!GO:0003713;transcription coactivator activity;0.00382674457470657!GO:0043492;ATPase activity, coupled to movement of substances;0.00390374785635477!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00410153623286077!GO:0048167;regulation of synaptic plasticity;0.00416566906654952!GO:0003724;RNA helicase activity;0.00427834485320178!GO:0030133;transport vesicle;0.00430639103427769!GO:0006364;rRNA processing;0.00446990669176437!GO:0006607;NLS-bearing substrate import into nucleus;0.00458565316852372!GO:0030660;Golgi-associated vesicle membrane;0.00484048874717842!GO:0051056;regulation of small GTPase mediated signal transduction;0.00484048874717842!GO:0006595;polyamine metabolic process;0.00488351487945078!GO:0031072;heat shock protein binding;0.00502605608883187!GO:0016585;chromatin remodeling complex;0.00506404399272804!GO:0048523;negative regulation of cellular process;0.00518325431350258!GO:0006897;endocytosis;0.00518325431350258!GO:0010324;membrane invagination;0.00518325431350258!GO:0016197;endosome transport;0.00545492887849278!GO:0030137;COPI-coated vesicle;0.00582780281926938!GO:0000786;nucleosome;0.0059325310088978!GO:0006260;DNA replication;0.00593940481323233!GO:0000118;histone deacetylase complex;0.00593940481323233!GO:0044432;endoplasmic reticulum part;0.00607526878290938!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.00666128004633056!GO:0046467;membrane lipid biosynthetic process;0.00673960963155417!GO:0003746;translation elongation factor activity;0.00678032088203665!GO:0031124;mRNA 3'-end processing;0.00680386855722102!GO:0008139;nuclear localization sequence binding;0.00680821874129898!GO:0008022;protein C-terminus binding;0.00684031633894646!GO:0006338;chromatin remodeling;0.00684216460819508!GO:0030658;transport vesicle membrane;0.00695812972382625!GO:0022406;membrane docking;0.00714561589844349!GO:0048278;vesicle docking;0.00714561589844349!GO:0003730;mRNA 3'-UTR binding;0.00782679552943782!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00813392696382473!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00813392696382473!GO:0016564;transcription repressor activity;0.00818057836882877!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00830120878694731!GO:0005762;mitochondrial large ribosomal subunit;0.00851826292366996!GO:0000315;organellar large ribosomal subunit;0.00851826292366996!GO:0009117;nucleotide metabolic process;0.00873166283060856!GO:0006402;mRNA catabolic process;0.00895688845699941!GO:0005869;dynactin complex;0.00921601894026447!GO:0016072;rRNA metabolic process;0.00963266802555365!GO:0007411;axon guidance;0.00968681953976976!GO:0019902;phosphatase binding;0.0097830144393988!GO:0016481;negative regulation of transcription;0.010002390657196!GO:0005637;nuclear inner membrane;0.0102082492392573!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.0102824382282982!GO:0019198;transmembrane receptor protein phosphatase activity;0.0102824382282982!GO:0000209;protein polyubiquitination;0.0103676459818693!GO:0003682;chromatin binding;0.0106741280437893!GO:0051246;regulation of protein metabolic process;0.0106862960458735!GO:0016584;nucleosome positioning;0.0111566965188865!GO:0051252;regulation of RNA metabolic process;0.0111794973120954!GO:0000314;organellar small ribosomal subunit;0.0111958213409679!GO:0005763;mitochondrial small ribosomal subunit;0.0111958213409679!GO:0006810;transport;0.0119321371542998!GO:0050803;regulation of synapse structure and activity;0.0122087683015095!GO:0019888;protein phosphatase regulator activity;0.012222120134564!GO:0016126;sterol biosynthetic process;0.0122724068581276!GO:0005048;signal sequence binding;0.0123579162129166!GO:0048487;beta-tubulin binding;0.0124581689321361!GO:0016301;kinase activity;0.0134981814545172!GO:0005839;proteasome core complex (sensu Eukaryota);0.0135796248300134!GO:0003899;DNA-directed RNA polymerase activity;0.0138319372699926!GO:0007019;microtubule depolymerization;0.0138880143033075!GO:0032594;protein transport within lipid bilayer;0.0143265694111134!GO:0032907;transforming growth factor-beta3 production;0.0143265694111134!GO:0032596;protein transport into lipid raft;0.0143265694111134!GO:0032910;regulation of transforming growth factor-beta3 production;0.0143265694111134!GO:0032595;B cell receptor transport within lipid bilayer;0.0143265694111134!GO:0033606;chemokine receptor transport within lipid bilayer;0.0143265694111134!GO:0032600;chemokine receptor transport out of lipid raft;0.0143265694111134!GO:0032599;protein transport out of lipid raft;0.0143265694111134!GO:0032597;B cell receptor transport into lipid raft;0.0143265694111134!GO:0032913;negative regulation of transforming growth factor-beta3 production;0.0143265694111134!GO:0003711;transcription elongation regulator activity;0.0146580358761628!GO:0006904;vesicle docking during exocytosis;0.0146668457405155!GO:0006612;protein targeting to membrane;0.0147191856805026!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.0148861937766355!GO:0009719;response to endogenous stimulus;0.0149681447051137!GO:0043025;cell soma;0.0156183885535969!GO:0019904;protein domain specific binding;0.0156255470760771!GO:0004722;protein serine/threonine phosphatase activity;0.015862896439164!GO:0046578;regulation of Ras protein signal transduction;0.01616076265212!GO:0030258;lipid modification;0.0163751232728667!GO:0045055;regulated secretory pathway;0.0165805548175177!GO:0005852;eukaryotic translation initiation factor 3 complex;0.016711503929735!GO:0051920;peroxiredoxin activity;0.0167295758074334!GO:0001578;microtubule bundle formation;0.0168689891407267!GO:0000792;heterochromatin;0.0174650060920079!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.0176146724905865!GO:0016281;eukaryotic translation initiation factor 4F complex;0.0178412581524346!GO:0008154;actin polymerization and/or depolymerization;0.0178412581524346!GO:0019843;rRNA binding;0.0178412581524346!GO:0065007;biological regulation;0.0179090118515679!GO:0042734;presynaptic membrane;0.0179212392878596!GO:0031301;integral to organelle membrane;0.0181091077754305!GO:0003714;transcription corepressor activity;0.0182180004787452!GO:0030145;manganese ion binding;0.0188111660693152!GO:0008021;synaptic vesicle;0.0188111660693152!GO:0030031;cell projection biogenesis;0.0191140561218117!GO:0019894;kinesin binding;0.0196685917107813!GO:0008286;insulin receptor signaling pathway;0.0198369345999931!GO:0045892;negative regulation of transcription, DNA-dependent;0.0199223451383648!GO:0005885;Arp2/3 protein complex;0.0199247743091523!GO:0040029;regulation of gene expression, epigenetic;0.020040546415699!GO:0006695;cholesterol biosynthetic process;0.020107216329384!GO:0030384;phosphoinositide metabolic process;0.0201381165563927!GO:0005789;endoplasmic reticulum membrane;0.0203972207420065!GO:0003677;DNA binding;0.0207553011981048!GO:0031123;RNA 3'-end processing;0.0212514992812325!GO:0005791;rough endoplasmic reticulum;0.0217768909048849!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0230446295329317!GO:0000339;RNA cap binding;0.0233051148243429!GO:0030132;clathrin coat of coated pit;0.0233348708539682!GO:0022890;inorganic cation transmembrane transporter activity;0.0236645317178856!GO:0006378;mRNA polyadenylation;0.0237494422281386!GO:0003684;damaged DNA binding;0.0238969528401438!GO:0006405;RNA export from nucleus;0.0239704025441602!GO:0015980;energy derivation by oxidation of organic compounds;0.0249168542209557!GO:0016050;vesicle organization and biogenesis;0.0251386893238133!GO:0018196;peptidyl-asparagine modification;0.0251386893238133!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.0251386893238133!GO:0007005;mitochondrion organization and biogenesis;0.0252787602539648!GO:0000226;microtubule cytoskeleton organization and biogenesis;0.0256420657481294!GO:0046474;glycerophospholipid biosynthetic process;0.0257715660211813!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.0261801634962925!GO:0050811;GABA receptor binding;0.0262140817475796!GO:0016791;phosphoric monoester hydrolase activity;0.0263882006490645!GO:0009892;negative regulation of metabolic process;0.0263882006490645!GO:0003690;double-stranded DNA binding;0.0267119227138851!GO:0043681;protein import into mitochondrion;0.0269466276365186!GO:0030125;clathrin vesicle coat;0.0269594257149811!GO:0030665;clathrin coated vesicle membrane;0.0269594257149811!GO:0007006;mitochondrial membrane organization and biogenesis;0.0272814637135793!GO:0005868;cytoplasmic dynein complex;0.0273500143107477!GO:0009165;nucleotide biosynthetic process;0.0273925250429242!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.0278979757549996!GO:0005521;lamin binding;0.0279183667683584!GO:0051540;metal cluster binding;0.0279847973154208!GO:0051536;iron-sulfur cluster binding;0.0279847973154208!GO:0008186;RNA-dependent ATPase activity;0.0287678538796551!GO:0005832;chaperonin-containing T-complex;0.0303156113175127!GO:0030175;filopodium;0.031949135112109!GO:0008180;signalosome;0.0327435387715666!GO:0007417;central nervous system development;0.0330195221938548!GO:0007185;transmembrane receptor protein tyrosine phosphatase signaling pathway;0.0331363103580135!GO:0004298;threonine endopeptidase activity;0.033375930817804!GO:0006916;anti-apoptosis;0.0334451792543626!GO:0050770;regulation of axonogenesis;0.0334840219427804!GO:0019887;protein kinase regulator activity;0.0336628305773882!GO:0051129;negative regulation of cellular component organization and biogenesis;0.0337350707364099!GO:0030742;GTP-dependent protein binding;0.0337767435108205!GO:0006383;transcription from RNA polymerase III promoter;0.0343656061207562!GO:0030663;COPI coated vesicle membrane;0.0346221935247528!GO:0030126;COPI vesicle coat;0.0346221935247528!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0352147113697788!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.035600383678811!GO:0045047;protein targeting to ER;0.035600383678811!GO:0030119;AP-type membrane coat adaptor complex;0.0356839184083075!GO:0008312;7S RNA binding;0.0356839184083075!GO:0006611;protein export from nucleus;0.0356839184083075!GO:0016569;covalent chromatin modification;0.0359298762574633!GO:0031902;late endosome membrane;0.0361242266451152!GO:0030041;actin filament polymerization;0.0371281700083392!GO:0046839;phospholipid dephosphorylation;0.0371281700083392!GO:0005938;cell cortex;0.0380445951031604!GO:0030032;lamellipodium biogenesis;0.0384166020988978!GO:0031114;regulation of microtubule depolymerization;0.0386451224168578!GO:0007026;negative regulation of microtubule depolymerization;0.0386451224168578!GO:0048488;synaptic vesicle endocytosis;0.0386627819679773!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0387083702442479!GO:0006818;hydrogen transport;0.0391127000147506!GO:0048519;negative regulation of biological process;0.0404369449688793!GO:0008276;protein methyltransferase activity;0.0404369449688793!GO:0030134;ER to Golgi transport vesicle;0.0405172377474228!GO:0032011;ARF protein signal transduction;0.0405172377474228!GO:0032012;regulation of ARF protein signal transduction;0.0405172377474228!GO:0030867;rough endoplasmic reticulum membrane;0.0407005321288485!GO:0012506;vesicle membrane;0.0410001634863178!GO:0003779;actin binding;0.0410680997143097!GO:0042585;germinal vesicle;0.0412123183620625!GO:0031324;negative regulation of cellular metabolic process;0.0424977958005063!GO:0048500;signal recognition particle;0.0431621037201899!GO:0007158;neuron adhesion;0.0438066273066403!GO:0001505;regulation of neurotransmitter levels;0.0446446259302931!GO:0016579;protein deubiquitination;0.0451541354000725!GO:0019207;kinase regulator activity;0.045686272512678!GO:0008097;5S rRNA binding;0.0459906493321043!GO:0051539;4 iron, 4 sulfur cluster binding;0.0463945975218374!GO:0016859;cis-trans isomerase activity;0.04695183095151!GO:0051179;localization;0.0469809701277772!GO:0008088;axon cargo transport;0.0469867102612815!GO:0043284;biopolymer biosynthetic process;0.0469867102612815!GO:0006352;transcription initiation;0.0469867102612815!GO:0016779;nucleotidyltransferase activity;0.0483268518739965!GO:0035258;steroid hormone receptor binding;0.0483268518739965!GO:0031628;opioid receptor binding;0.0484681242127774!GO:0031852;mu-type opioid receptor binding;0.0484681242127774!GO:0005784;translocon complex;0.0489373995899915!GO:0030127;COPII vesicle coat;0.0490684011333279!GO:0012507;ER to Golgi transport vesicle membrane;0.0490684011333279!GO:0006643;membrane lipid metabolic process;0.0498124298894364!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0499336276000106!GO:0005741;mitochondrial outer membrane;0.0499336276000106!GO:0005684;U2-dependent spliceosome;0.0499336276000106!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0499336276000106!GO:0033043;regulation of organelle organization and biogenesis;0.0499336276000106
|sample_id=10073
|sample_id=10073
|sample_note=
|sample_note=
Line 75: Line 99:
|sample_tissue=occipital lobe
|sample_tissue=occipital lobe
|top_motifs=PRRX1,2:4.73817258856;NKX2-3_NKX2-5:4.56928912053;FOXM1:4.43308904411;POU5F1:4.38904620437;AHR_ARNT_ARNT2:4.35457149444;MZF1:4.09918483294;ZFP161:3.91247462749;ADNP_IRX_SIX_ZHX:3.84748698701;SOX2:3.82729465891;BREu{core}:3.82474359164;POU1F1:3.81329057812;MED-1{core}:3.81107318778;CUX2:3.73677815158;POU3F1..4:3.6699154449;HOXA9_MEIS1:3.66867268136;POU6F1:3.63289364482;ALX1:3.52772895306;ZNF384:3.48945066966;EGR1..3:3.44657462134;FOXP1:3.38300609304;MTE{core}:3.34969152496;OCT4_SOX2{dimer}:3.20865423069;PRDM1:3.16839130295;NKX6-1,2:3.13229464517;SOX17:3.07610851394;FOXD3:3.06151523105;CDC5L:3.05548794355;TFAP2B:2.97540518397;HMGA1,2:2.9733430142;TEF:2.73787347335;PAX4:2.73377914477;PATZ1:2.70108817057;IKZF2:2.69914805462;TFDP1:2.67694070759;DBP:2.64585266768;LHX3,4:2.6438812867;ARID5B:2.55370471796;NHLH1,2:2.50697696248;RFX1:2.48983741012;T:2.47023990863;RREB1:2.44331402629;REST:2.40120659773;MYFfamily:2.37362605307;GTF2I:2.37285810271;HOX{A4,D4}:2.35943511886;ONECUT1,2:2.33215021627;TGIF1:2.30449740435;GATA4:2.28578153915;SOX{8,9,10}:2.18892297756;GFI1B:2.18051811351;HIC1:2.04606351774;PAX5:2.00543318782;ATF2:1.99177234216;NRF1:1.94709299465;GFI1:1.93627095635;BPTF:1.89881319775;ZBTB6:1.86704310292;SMAD1..7,9:1.86505379786;GCM1,2:1.85328781451;ZIC1..3:1.85085758142;PITX1..3:1.82545166117;TOPORS:1.7994322399;MAZ:1.71157274333;AIRE:1.69897287865;LEF1_TCF7_TCF7L1,2:1.68686390011;EVI1:1.67298814141;NKX3-1:1.58144838783;STAT1,3:1.56412607109;FOXQ1:1.49033235207;KLF4:1.48743711019;RORA:1.46220776297;SOX5:1.44556517445;RBPJ:1.44351720321;MTF1:1.42441203102;FOXL1:1.33203292627;ZBTB16:1.30730583418;ZNF143:1.2938039852;PAX8:1.27953800586;FOXP3:1.24975134044;LMO2:1.16404108707;PAX1,9:1.15958847855;YY1:1.11738402991;NANOG:1.11331710189;CDX1,2,4:1.09647741985;JUN:1.03788034962;PAX6:1.03045084468;RFX2..5_RFXANK_RFXAP:0.983667189094;GZF1:0.945835808144;NKX3-2:0.933665461127;EP300:0.880567353776;FOXN1:0.789254944276;FOXA2:0.647805975871;UFEwm:0.622014269984;ZNF423:0.61599063184;TLX2:0.591989415857;SPZ1:0.436711590713;PBX1:0.431630041024;ATF5_CREB3:0.407712608689;XCPE1{core}:0.330327579618;ATF4:0.325926583547;HBP1_HMGB_SSRP1_UBTF:0.293690374351;CREB1:0.246634718519;MYOD1:0.230686542883;SP1:0.221122979018;MAFB:0.201117042746;PAX3,7:0.198979451864;CRX:0.178324912884;XBP1:0.150897719338;GTF2A1,2:0.123183347298;HAND1,2:0.0776323161403;MEF2{A,B,C,D}:0.0624803299128;NFY{A,B,C}:0.0417907162374;FOX{F1,F2,J1}:0.0317750653599;ELK1,4_GABP{A,B1}:-0.0106339719566;PDX1:-0.0539936977205;HMX1:-0.178876330643;DMAP1_NCOR{1,2}_SMARC:-0.187857237558;GATA6:-0.213560378954;TAL1_TCF{3,4,12}:-0.214125574395;E2F1..5:-0.222405438701;POU2F1..3:-0.24532416525;NANOG{mouse}:-0.261922672357;ZNF238:-0.270323947389;NR1H4:-0.28261197903;VSX1,2:-0.403242279687;ZEB1:-0.458515442303;FOX{D1,D2}:-0.488405242212;TFAP2{A,C}:-0.509289910413;HIF1A:-0.530087625996;FOX{I1,J2}:-0.544261158276;EBF1:-0.571756799662;FOXO1,3,4:-0.577238150321;HNF1A:-0.581551450315;SREBF1,2:-0.58952115178;SPIB:-0.61416630259;ALX4:-0.622880523217;PAX2:-0.629550460755;HSF1,2:-0.667665344378;TLX1..3_NFIC{dimer}:-0.755113063773;NKX2-1,4:-0.76147763204;MYBL2:-0.802311606056;HOX{A5,B5}:-0.807302777608;SPI1:-0.810108744967;HNF4A_NR2F1,2:-0.810661653587;CEBPA,B_DDIT3:-0.815765526993;PPARG:-0.871935710579;HOX{A6,A7,B6,B7}:-0.879342168612;RUNX1..3:-0.904347845549;NFIL3:-0.916180424643;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.917052892397;MYB:-0.919560039624;IRF7:-0.931611108375;TEAD1:-0.940427733841;NR3C1:-0.955881894164;SNAI1..3:-0.96583672164;TBP:-0.977916646337;STAT2,4,6:-1.03265717784;NFATC1..3:-1.05397283506;TFAP4:-1.10313473258;GLI1..3:-1.10974153385;bHLH_family:-1.1120533655;IRF1,2:-1.12579601694;NR6A1:-1.12762115141;NFIX:-1.15918728699;IKZF1:-1.16355568721;NFKB1_REL_RELA:-1.17432881063;FOS_FOS{B,L1}_JUN{B,D}:-1.21035584148;FOSL2:-1.22959901593;NFE2L2:-1.2473933152;ZNF148:-1.29805554813;BACH2:-1.30095104446;AR:-1.30294301314;NFE2L1:-1.32180864198;ETS1,2:-1.37275175693;NR5A1,2:-1.38636602266;NFE2:-1.42199532308;TP53:-1.43827647753;STAT5{A,B}:-1.48739317647;TBX4,5:-1.57061544854;ATF6:-1.57208317447;EN1,2:-1.60132708475;HLF:-1.61056624231;ESRRA:-1.6326978557;RXRA_VDR{dimer}:-1.71392239701;HES1:-1.74213143328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.75382747972;ELF1,2,4:-1.79313495606;TFCP2:-1.89558865292;ESR1:-1.90950862067;NKX2-2,8:-1.98619665149;RXR{A,B,G}:-2.13740559928;SRF:-2.37390258431
|top_motifs=PRRX1,2:4.73817258856;NKX2-3_NKX2-5:4.56928912053;FOXM1:4.43308904411;POU5F1:4.38904620437;AHR_ARNT_ARNT2:4.35457149444;MZF1:4.09918483294;ZFP161:3.91247462749;ADNP_IRX_SIX_ZHX:3.84748698701;SOX2:3.82729465891;BREu{core}:3.82474359164;POU1F1:3.81329057812;MED-1{core}:3.81107318778;CUX2:3.73677815158;POU3F1..4:3.6699154449;HOXA9_MEIS1:3.66867268136;POU6F1:3.63289364482;ALX1:3.52772895306;ZNF384:3.48945066966;EGR1..3:3.44657462134;FOXP1:3.38300609304;MTE{core}:3.34969152496;OCT4_SOX2{dimer}:3.20865423069;PRDM1:3.16839130295;NKX6-1,2:3.13229464517;SOX17:3.07610851394;FOXD3:3.06151523105;CDC5L:3.05548794355;TFAP2B:2.97540518397;HMGA1,2:2.9733430142;TEF:2.73787347335;PAX4:2.73377914477;PATZ1:2.70108817057;IKZF2:2.69914805462;TFDP1:2.67694070759;DBP:2.64585266768;LHX3,4:2.6438812867;ARID5B:2.55370471796;NHLH1,2:2.50697696248;RFX1:2.48983741012;T:2.47023990863;RREB1:2.44331402629;REST:2.40120659773;MYFfamily:2.37362605307;GTF2I:2.37285810271;HOX{A4,D4}:2.35943511886;ONECUT1,2:2.33215021627;TGIF1:2.30449740435;GATA4:2.28578153915;SOX{8,9,10}:2.18892297756;GFI1B:2.18051811351;HIC1:2.04606351774;PAX5:2.00543318782;ATF2:1.99177234216;NRF1:1.94709299465;GFI1:1.93627095635;BPTF:1.89881319775;ZBTB6:1.86704310292;SMAD1..7,9:1.86505379786;GCM1,2:1.85328781451;ZIC1..3:1.85085758142;PITX1..3:1.82545166117;TOPORS:1.7994322399;MAZ:1.71157274333;AIRE:1.69897287865;LEF1_TCF7_TCF7L1,2:1.68686390011;EVI1:1.67298814141;NKX3-1:1.58144838783;STAT1,3:1.56412607109;FOXQ1:1.49033235207;KLF4:1.48743711019;RORA:1.46220776297;SOX5:1.44556517445;RBPJ:1.44351720321;MTF1:1.42441203102;FOXL1:1.33203292627;ZBTB16:1.30730583418;ZNF143:1.2938039852;PAX8:1.27953800586;FOXP3:1.24975134044;LMO2:1.16404108707;PAX1,9:1.15958847855;YY1:1.11738402991;NANOG:1.11331710189;CDX1,2,4:1.09647741985;JUN:1.03788034962;PAX6:1.03045084468;RFX2..5_RFXANK_RFXAP:0.983667189094;GZF1:0.945835808144;NKX3-2:0.933665461127;EP300:0.880567353776;FOXN1:0.789254944276;FOXA2:0.647805975871;UFEwm:0.622014269984;ZNF423:0.61599063184;TLX2:0.591989415857;SPZ1:0.436711590713;PBX1:0.431630041024;ATF5_CREB3:0.407712608689;XCPE1{core}:0.330327579618;ATF4:0.325926583547;HBP1_HMGB_SSRP1_UBTF:0.293690374351;CREB1:0.246634718519;MYOD1:0.230686542883;SP1:0.221122979018;MAFB:0.201117042746;PAX3,7:0.198979451864;CRX:0.178324912884;XBP1:0.150897719338;GTF2A1,2:0.123183347298;HAND1,2:0.0776323161403;MEF2{A,B,C,D}:0.0624803299128;NFY{A,B,C}:0.0417907162374;FOX{F1,F2,J1}:0.0317750653599;ELK1,4_GABP{A,B1}:-0.0106339719566;PDX1:-0.0539936977205;HMX1:-0.178876330643;DMAP1_NCOR{1,2}_SMARC:-0.187857237558;GATA6:-0.213560378954;TAL1_TCF{3,4,12}:-0.214125574395;E2F1..5:-0.222405438701;POU2F1..3:-0.24532416525;NANOG{mouse}:-0.261922672357;ZNF238:-0.270323947389;NR1H4:-0.28261197903;VSX1,2:-0.403242279687;ZEB1:-0.458515442303;FOX{D1,D2}:-0.488405242212;TFAP2{A,C}:-0.509289910413;HIF1A:-0.530087625996;FOX{I1,J2}:-0.544261158276;EBF1:-0.571756799662;FOXO1,3,4:-0.577238150321;HNF1A:-0.581551450315;SREBF1,2:-0.58952115178;SPIB:-0.61416630259;ALX4:-0.622880523217;PAX2:-0.629550460755;HSF1,2:-0.667665344378;TLX1..3_NFIC{dimer}:-0.755113063773;NKX2-1,4:-0.76147763204;MYBL2:-0.802311606056;HOX{A5,B5}:-0.807302777608;SPI1:-0.810108744967;HNF4A_NR2F1,2:-0.810661653587;CEBPA,B_DDIT3:-0.815765526993;PPARG:-0.871935710579;HOX{A6,A7,B6,B7}:-0.879342168612;RUNX1..3:-0.904347845549;NFIL3:-0.916180424643;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.917052892397;MYB:-0.919560039624;IRF7:-0.931611108375;TEAD1:-0.940427733841;NR3C1:-0.955881894164;SNAI1..3:-0.96583672164;TBP:-0.977916646337;STAT2,4,6:-1.03265717784;NFATC1..3:-1.05397283506;TFAP4:-1.10313473258;GLI1..3:-1.10974153385;bHLH_family:-1.1120533655;IRF1,2:-1.12579601694;NR6A1:-1.12762115141;NFIX:-1.15918728699;IKZF1:-1.16355568721;NFKB1_REL_RELA:-1.17432881063;FOS_FOS{B,L1}_JUN{B,D}:-1.21035584148;FOSL2:-1.22959901593;NFE2L2:-1.2473933152;ZNF148:-1.29805554813;BACH2:-1.30095104446;AR:-1.30294301314;NFE2L1:-1.32180864198;ETS1,2:-1.37275175693;NR5A1,2:-1.38636602266;NFE2:-1.42199532308;TP53:-1.43827647753;STAT5{A,B}:-1.48739317647;TBX4,5:-1.57061544854;ATF6:-1.57208317447;EN1,2:-1.60132708475;HLF:-1.61056624231;ESRRA:-1.6326978557;RXRA_VDR{dimer}:-1.71392239701;HES1:-1.74213143328;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.75382747972;ELF1,2,4:-1.79313495606;TFCP2:-1.89558865292;ESR1:-1.90950862067;NKX2-2,8:-1.98619665149;RXR{A,B,G}:-2.13740559928;SRF:-2.37390258431
|xref=
}}
}}

Revision as of 18:58, 10 August 2017

Name:occipital lobe, fetal, donor1
Species:Human (Homo sapiens)
Library ID:CNhs11784
Sample type:tissues
Genomic View: UCSC
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissueoccipital lobe
dev stage22 weeks fetus
sexmale
ageNA
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyBiochain
collaborationFANTOM5 OSC CORE (contact: Al Forrest)
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberA602123
catalog numberCat:RtHFN: Brain occiptal lobe
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers
MethodSample accession id
CAGE  SAMD00005049
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs11784 CAGE DRX008693 DRR009565
Accession ID Hg19

Library idBAMCTSS
CNhs11784 DRZ000990 DRZ002375
Accession ID Hg38

Library idBAMCTSS
CNhs11784 DRZ012340 DRZ013725
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural1.014
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.00234
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma-0.0996
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.0976
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.303
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0.0976
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0.0314
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0.177
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0.177
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0.0976
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.129
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.18
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed0.0832
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0.969
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte-0.0815
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0.0863
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus0.00646
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.303
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.0976
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.303
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.68
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small-0.25
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.919
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial0.763
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0.0976
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.4
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.177
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.303
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11784

Jaspar motifP-value
MA0002.27.59244e-4
MA0003.10.193
MA0004.10.419
MA0006.10.246
MA0007.10.134
MA0009.10.203
MA0014.10.562
MA0017.10.00385
MA0018.20.172
MA0019.10.214
MA0024.10.191
MA0025.10.0646
MA0027.10.413
MA0028.10.446
MA0029.10.0898
MA0030.10.555
MA0031.10.0663
MA0035.20.027
MA0038.10.146
MA0039.20.123
MA0040.10.815
MA0041.10.426
MA0042.10.599
MA0043.10.806
MA0046.10.063
MA0047.20.00224
MA0048.10.701
MA0050.15.18325e-5
MA0051.10.00872
MA0052.10.124
MA0055.10.114
MA0057.10.299
MA0058.10.291
MA0059.10.185
MA0060.10.146
MA0061.10.0171
MA0062.20.0929
MA0065.23.59073e-4
MA0066.10.0138
MA0067.10.99
MA0068.10.152
MA0069.10.46
MA0070.10.29
MA0071.10.0622
MA0072.10.344
MA0073.10.214
MA0074.10.177
MA0076.10.727
MA0077.10.2
MA0078.10.623
MA0079.20.966
MA0080.21.71288e-11
MA0081.10.0555
MA0083.10.00305
MA0084.10.668
MA0087.10.378
MA0088.10.241
MA0090.10.133
MA0091.10.302
MA0092.10.408
MA0093.10.423
MA0099.24.66246e-20
MA0100.10.927
MA0101.10.00826
MA0102.20.0349
MA0103.10.164
MA0104.20.725
MA0105.10.0076
MA0106.10.0555
MA0107.10.0105
MA0108.20.238
MA0111.10.634
MA0112.21.60056e-4
MA0113.10.0481
MA0114.10.00916
MA0115.10.345
MA0116.10.012
MA0117.10.824
MA0119.10.135
MA0122.10.353
MA0124.10.705
MA0125.10.391
MA0131.10.612
MA0135.10.418
MA0136.11.33364e-13
MA0137.20.153
MA0138.20.712
MA0139.10.238
MA0140.10.00134
MA0141.10.00561
MA0142.10.903
MA0143.10.534
MA0144.10.0917
MA0145.10.0909
MA0146.10.0133
MA0147.10.623
MA0148.10.0154
MA0149.10.0148
MA0150.14.90466e-5
MA0152.10.276
MA0153.10.246
MA0154.10.0245
MA0155.10.447
MA0156.13.31088e-7
MA0157.10.0449
MA0159.10.00234
MA0160.10.00968
MA0162.10.221
MA0163.12.66805e-4
MA0164.10.922
MA0258.10.0063
MA0259.10.973



FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data

library id: CNhs11784

Novel motifP-value
10.0642
100.108
1000.537
1010.759
1020.865
1030.101
1040.105
1050.148
1060.0335
1070.0973
1080.971
1097.03297e-4
110.0283
1100.143
1110.377
1120.201
1130.417
1140.0557
1150.724
1160.349
1170.0293
1180.273
1190.216
120.504
1200.216
1210.399
1220.715
1230.137
1240.48
1250.51
1260.0142
1270.207
1280.147
1290.365
130.00461
1300.0777
1310.92
1320.711
1330.242
1340.928
1350.643
1360.0162
1370.475
1380.735
1390.0807
140.616
1400.647
1410.446
1420.676
1430.00768
1440.947
1450.339
1460.403
1470.956
1480.0402
1490.0771
150.0872
1500.287
1510.414
1520.0529
1530.84
1540.524
1550.799
1560.575
1570.461
1580.826
1590.269
160.0409
1600.247
1610.158
1620.588
1630.448
1640.0988
1650.192
1660.98
1670.788
1680.0509
1690.009
170.0777
180.216
190.124
20.564
200.536
210.158
220.092
230.178
240.0273
250.409
260.0193
270.425
280.636
290.0696
30.046
300.646
310.708
320.0383
330.136
340.545
350.555
360.182
370.0184
380.221
390.24
40.839
400.0419
410.279
420.202
430.113
440.245
450.565
460.178
470.0823
480.0795
490.175
50.317
500.322
510.365
520.359
530.982
540.297
550.64
560.372
570.585
580.215
590.0381
60.915
600.0524
610.0486
620.147
630.126
640.373
650.178
660.333
670.559
680.249
690.511
70.0524
700.0181
710.023
720.159
730.0198
740.533
750.0491
760.672
770.0929
780.0124
790.27
80.106
800.152
810.714
820.363
830.00566
840.906
850.0893
860.251
870.00143
880.696
890.206
90.262
900.384
910.89
920.211
930.985
940.135
950.00962
960.365
970.799
980.299
990.565



de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br> library id: CNhs11784


FANTOM5 (FF) ontology

Direct parent terms


Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data

UBERON: Anatomy
0000468 (multi-cellular organism)
0000922 (embryo)
0000955 (brain)
0002021 (occipital lobe)
0000956 (cerebral cortex)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0002619 (regional part of cerebral cortex)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)
0001950 (neocortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000999 (fetal tissue sample)
0000004 (tissue sample)
0010073 (human occipital lobe - fetal sample)

Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
NA

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