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{{f5samples
 
{{f5samples
|ancestors_in_anatomy_facet=UBERON:0000025,UBERON:0000033,UBERON:0000061,UBERON:0000062,UBERON:0000064,UBERON:0000073,UBERON:0000125,UBERON:0000153,UBERON:0000465,UBERON:0000467,UBERON:0000468,UBERON:0000475,UBERON:0000477,UBERON:0000479,UBERON:0000480,UBERON:0000481,UBERON:0000922,UBERON:0000923,UBERON:0000924,UBERON:0000955,UBERON:0001016,UBERON:0001017,UBERON:0001049,UBERON:0001062,UBERON:0001869,UBERON:0001873,UBERON:0001890,UBERON:0001893,UBERON:0002020,UBERON:0002050,UBERON:0002308,UBERON:0002346,UBERON:0002420,UBERON:0002435,UBERON:0002532,UBERON:0002616,UBERON:0002780,UBERON:0002791,UBERON:0003056,UBERON:0003075,UBERON:0003080,UBERON:0003528,UBERON:0004121,UBERON:0005068,UBERON:0005291,UBERON:0005382,UBERON:0005383,UBERON:0005423,UBERON:0005743,UBERON:0006598,UBERON:0007023,UBERON:0007135,UBERON:0007284
+
|DRA_sample_Accession=CAGE@SAMD00005155
 +
|accession_numbers=CAGE;DRX008629;DRR009501;DRZ000926;DRZ002311;DRZ012276;DRZ013661
 +
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0007023,UBERON:0000955,UBERON:0001873,UBERON:0000369,UBERON:0002435,UBERON:0000479,UBERON:0004121,UBERON:0000064,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000481,UBERON:0000073,UBERON:0000477,UBERON:0003528,UBERON:0002791,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0009663,UBERON:0002420,UBERON:0002616,UBERON:0002780,UBERON:0000125,UBERON:0002020,UBERON:0007245,UBERON:0010317,UBERON:0002308,UBERON:0010009,UBERON:0001017,UBERON:0001016,UBERON:0001869,UBERON:0001893,UBERON:0001890,UBERON:0005383,UBERON:0010011,UBERON:0000204,UBERON:0005382,UBERON:0000454
 
|ancestors_in_cell_lineage_facet=
 
|ancestors_in_cell_lineage_facet=
 
|ancestors_in_disease_facet=
 
|ancestors_in_disease_facet=
 +
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000101,FF:0000001,FF:0000998,FF:0000004,FF:0010164
 
|comment=
 
|comment=
 
|created_by=
 
|created_by=
 
|creation_date=
 
|creation_date=
 +
|data_phase=2
 +
|datafreeze_phase=2
 
|def=
 
|def=
|
+
|expression_enrichment_score=
 
|fonse_cell_line=
 
|fonse_cell_line=
 
|fonse_cell_line_closure=
 
|fonse_cell_line_closure=
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|fonse_treatment_closure=
 
|fonse_treatment_closure=
 
|has_quality=
 
|has_quality=
 +
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/caudate%2520nucleus%2520-%2520adult%252c%2520donor10196.CNhs13802.10177-103C6.hg19.nobarcode.bam
 +
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/caudate%2520nucleus%2520-%2520adult%252c%2520donor10196.CNhs13802.10177-103C6.hg19.ctss.bed.gz
 +
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.tissue.hCAGE/caudate%2520nucleus%2520-%2520adult%252c%2520donor10196.CNhs13802.10177-103C6.hg19.nobarcode.rdna.fa.gz
 +
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/caudate%2520nucleus%2520-%2520adult%252c%2520donor10196.CNhs13802.10177-103C6.hg38.nobarcode.bam
 +
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.tissue.hCAGE/caudate%2520nucleus%2520-%2520adult%252c%2520donor10196.CNhs13802.10177-103C6.hg38.nobarcode.ctss.bed.gz
 
|id=FF:10177-103C6
 
|id=FF:10177-103C6
|is_a=EFO:0002091;;FF:0000004;;FF:0000210;;FF:0010164
+
|is_a=EFO:0002091;;FF:0010164
 +
|is_obsolete=
 +
|library_id=CNhs13802
 +
|library_id_phase_based=2:CNhs13802
 +
|microRNAs=
 +
|microRNAs_nn=
 +
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;10177
 +
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;10177
 
|name=caudate nucleus - adult, donor10196
 
|name=caudate nucleus - adult, donor10196
 
|namespace=FANTOM5
 
|namespace=FANTOM5
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|profile_rnaseq=
 
|profile_rnaseq=
 
|profile_srnaseq=
 
|profile_srnaseq=
 +
|refex=http://refex.dbcls.jp/genelist.php?lang
 +
|repeat_enrich_byfamily=0,0,0,0,0.400167706403058,0,0,-0.160318030086386,0.275482132507796,-0.0978587210709516,0.502511078340563,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0.137741066253898,0.476436705234193,0,0.177524236239738,0,0,0.724387348996928,0,0,0,0,0,0,0,0,0,0,0,0,-0.145899716966013,0,0,0,0,0,0,0,0,0.113526045141064,0,0,0,0.275482132507796,0,0.186552667815134,0,0.466159218553051,0,0,0.345368556018365,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275482132507796,0,0,0,0,0,0,0.442712183231462,0.137741066253898,0,0.100515066906727,0.396718997083748,0.476436705234193,0,0.149818317155796,0.00693098973913364,0.14789975517376,0.328669721430557,0,0,0,0.177446781270089,0.28083965535083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185202195975367,0,0,0,-0.0847393819181335,-0.42529763515877,0,0,0,0,0,0
 +
|repeat_enrich_byname=0,0,0,0,0.177446781270089,0.734696396725932,0,0,0,0,0,0.952873410468385,0.442712183231462,0,0,0,-0.247178875285564,0.137741066253898,-0.0313740355205467,0.29919704070799,0,0,0.828163467276979,0,0.563151579795656,0.128531352218468,0.229081160173428,0.275482132507796,0.563151579795656,0.563151579795656,0,0.275482132507796,-0.128119866952565,0,-0.0504125515893149,0.275482132507796,0,0,0,0.137741066253898,0.429224165827525,0,0.374451084955261,0.666352135648564,0,0.275482132507796,0,0.275482132507796,0.0888564885353042,0,0.679455929012377,0.192761964184378,1.5285623265921,-0.0774594763547365,0.100515066906727,0,0,0.137741066253898,0.456798663787721,0.108738181210659,0,0,0.703771364955644,0.483573491249853,0,0,1.53911676996701,0,-0.244032640756614,-0.139741282943032,0,0.0215831356610689,0,0,0.275482132507796,0,0,0.275482132507796,0,0.442712183231462,0.734696396725932,0,0,0.163862624794294,-0.326988596678969,0.0263743710305783,0,0,0,0.272457206509459,0,0.0471133840887294,-0.0978040234487711,-0.239580720817632,0,0.0286782298215846,0.062678753662501,0.824727367593634,0.288461153088243,-0.0127548896725702,0.502667377572453,0.760328186306252,-0.189981719549847,0,0.396718997083748,0.31114566309553,0.258726673820533,-0.88063885515555,-0.0257529182133499,-0.165869998230749,0.00336563401980872,0,0,0.275482132507796,0.228619203316493,0.0772384637054946,0.0394075057826979,-0.0474025312453119,0.508405232154804,0.70141936066683,0.406418662874033,0.379678528357512,-0.236316782507456,1.46113538525693,0.669680641706953,0,0.167131965074997,0.0461536956070951,0.800335412806117,0.185377960545803,0.192123618740868,-0.222760527311667,-0.173113989947217,0,0.0791741179846752,0.207137871430427,0.877734838153791,0.303067452114253,0.0261922829818282,0.734696396725932,0,-0.13606504763995,0,0,0,0.351724640232443,0.800335412806117,-0.184544442213228,0.886799478773792,0.0426265709522509,0.419937403850262,0.389178209156793,0.058120502874473,0.0700621180103795,0.275482132507796,0.149818317155796,0,0.40595611461712,0.0331872341423616,0.0812721787254042,-0.0632805047454135,0.0380345277778186,-0.0346616481613563,0.0203173778397242,1.6457167152818,-0.0731324909146185,0.322751199798485,-0.307709726664811,-0.131600421929114,0.374880085495573,0.71220858033083,0.296342320982113,0.243572344085167,0.47541618608328,0.0258993075725237,0.582869008847645,0,0.0932368976695479,0.952873410468385,-0.205293351686055,0,-0.0796307178607534,-0.0977215682417785,0.12386220521497,0.129414080528727,0.0713126995088016,0.336449210660016,1.28669867887799,0,0.0770016424641202,0,0,-0.150367083334639,0.210034069164808,0.00970566375114149,0.409719689425576,0.275482132507796,0.203682832164266,1.78696719753004,1.3474821041714,0.633845922387116,0.207236145467073,0.657339442861113,0.0967601797506115,-0.0460513344177403,0.196119371610823,0.326741109796528,0.442712183231462,0,-0.0825487581970689,0.563151579795656,0.442712183231462,0.25141587495776,0.57799056097677,0.180552088847484,0.481370055239176,0.37313034988522,0.429285963202701,0.0789247326132554,0.275482132507796,-0.177527765965176,1.68868703409747,0.165320636622458,0,0,0.300144516447463,0,0,0.476436705234193,1.61128095574813,-0.180856648163847,0,0,0,0,0,0,0.046958099062952,0.094469116633559,0.445502082589669,0,0.0044889120132755,0,0,0.275482132507796,0,0.275482132507796,0.121568140949164,0,0,-0.79199542601356,0.0668564921534966,-0.12301741567642,0.137741066253898,0.137741066253898,0,0,-0.215723402553475,0.239475621136738,0,-0.131862706497632,0.275482132507796,0,0,0.657339442861113,0.477010590006445,0,0,0,0.137741066253898,-0.057730457053664,0.35945319476964,0,0,0.137741066253898,0.286197178193865,0.563151579795656,0.111114341717646,0,0.000791082797101215,-0.216661675895646,0,0,0.415809963150249,0.0940230890653915,0.177096735697285,1.09945700920523,0.0531325940424324,-0.20122409290415,-1.34545561136541,-0.746468760852806,0.0133005653823999,0,0.395992311071225,0,0,-0.301247924907316,0.0202217918207439,0.275482132507796,0.551975638323467,0,0,0,0,0,0,0.643029426376035,0,0,0.0450477327241217,0,0,0.657339442861113,0,0,0,0,0.275482132507796,0.125112320016847,-0.0922240566585104,0.271857515105182,0,0,0,0,0,0,-0.0241060230789031,0.0781126768186947,0,0,0,0,0,0,0,0,0.481447470805142,0,0,0,0,0,0.466159218553051,0,0,0,0,0.562309973449664,0,0,-0.277362132193514,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.123319086035448,-0.0978587210709516,0,0,0,0,0.800335412806117,0.275482132507796,0,0.000648834301705203,0,0.442712183231462,0,0,1.55050193844545,0,0,0,-0.104796384789156,0,-0.160318030086386,0,0,0.442712183231462,0.281575789897828,0,0,0,0,0,0,0.442712183231462,0,0,0,0,0,0,0,0,0,0,-0.603075217751873,0.275482132507796,0.594149165106376,0.185592410073176,0,0,0.233782435051412,0,0,0,0,0,0,-0.031340424028527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137741066253898,0.0546279308490015,0,0,0,0,0,0,0,0.177524236239738,0,0,0.267064348069103,0,0,0,0,0,0,0.208904654620252,0.0841277985398185,0.118724680207423,0,0,0,0.227190217415373,0.2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|rna_box=103
 
|rna_box=103
 
|rna_catalog_number=
 
|rna_catalog_number=
Line 57: Line 79:
 
|rna_weight_ug=31.52925
 
|rna_weight_ug=31.52925
 
|sample_age=60
 
|sample_age=60
 +
|sample_category=tissues
 
|sample_cell_catalog=NA
 
|sample_cell_catalog=NA
 
|sample_cell_line=
 
|sample_cell_line=
Line 69: Line 92:
 
|sample_ethnicity=
 
|sample_ethnicity=
 
|sample_experimental_condition=
 
|sample_experimental_condition=
 +
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.42305001673985e-284!GO:0005737;cytoplasm;5.37115361450273e-146!GO:0044444;cytoplasmic part;1.33195449970213e-97!GO:0043226;organelle;3.04032247308605e-97!GO:0043229;intracellular organelle;1.34531287171886e-96!GO:0043227;membrane-bound organelle;4.07640151995265e-89!GO:0043231;intracellular membrane-bound organelle;7.60877041796488e-89!GO:0044422;organelle part;1.80602183901538e-67!GO:0044446;intracellular organelle part;1.9513392105041e-66!GO:0032991;macromolecular complex;3.30853824395079e-63!GO:0005515;protein binding;1.13872650400658e-62!GO:0030529;ribonucleoprotein complex;4.24930471416452e-44!GO:0016043;cellular component organization and biogenesis;5.32127839005257e-44!GO:0005739;mitochondrion;2.67084970592422e-42!GO:0003723;RNA binding;4.52923787468251e-40!GO:0031090;organelle membrane;2.86875435862928e-35!GO:0043234;protein complex;1.49344497946492e-34!GO:0033036;macromolecule localization;8.88840913237537e-33!GO:0015031;protein transport;1.76770126535255e-32!GO:0044429;mitochondrial part;7.52515384797192e-31!GO:0046907;intracellular transport;3.02151519872248e-30!GO:0008104;protein localization;1.67587936335125e-29!GO:0045184;establishment of protein localization;1.69983461973135e-29!GO:0043233;organelle lumen;2.82624999530095e-29!GO:0031974;membrane-enclosed lumen;2.82624999530095e-29!GO:0044428;nuclear part;7.48570895563306e-29!GO:0044238;primary metabolic process;1.69795056620586e-28!GO:0044237;cellular metabolic process;8.46178330377852e-28!GO:0005829;cytosol;3.67133513747693e-27!GO:0031975;envelope;3.00058705355868e-26!GO:0031967;organelle envelope;3.3729531214975e-26!GO:0016071;mRNA metabolic process;5.68688319757457e-26!GO:0019538;protein metabolic process;8.97543504646563e-26!GO:0043170;macromolecule metabolic process;1.16607092400867e-25!GO:0006396;RNA processing;1.19977510365863e-25!GO:0051649;establishment of cellular localization;2.85683602132983e-25!GO:0051641;cellular localization;4.10124947938447e-25!GO:0005840;ribosome;1.33586043270677e-24!GO:0008380;RNA splicing;2.95709986139043e-24!GO:0044260;cellular macromolecule metabolic process;8.40771739104534e-23!GO:0006397;mRNA processing;3.48024576899283e-22!GO:0016192;vesicle-mediated transport;4.66331789043191e-22!GO:0044267;cellular protein metabolic process;5.26428930250459e-22!GO:0006412;translation;1.18732798995891e-21!GO:0006886;intracellular protein transport;1.40288388068498e-21!GO:0006119;oxidative phosphorylation;3.08587092986742e-21!GO:0005740;mitochondrial envelope;3.26593405083008e-21!GO:0031966;mitochondrial membrane;4.15848331992024e-21!GO:0005634;nucleus;4.78681890383008e-21!GO:0003735;structural constituent of ribosome;5.30740447025383e-21!GO:0019866;organelle inner membrane;4.38452229359013e-19!GO:0005743;mitochondrial inner membrane;1.5672554304913e-18!GO:0033279;ribosomal subunit;2.03050562741037e-18!GO:0006996;organelle organization and biogenesis;5.47613753100039e-18!GO:0065003;macromolecular complex assembly;5.64278372472573e-18!GO:0009058;biosynthetic process;2.87597056686397e-17!GO:0031981;nuclear lumen;1.06757857666838e-16!GO:0044455;mitochondrial membrane part;4.66994912383855e-16!GO:0005794;Golgi apparatus;5.29629632049488e-16!GO:0005681;spliceosome;5.50419125368605e-16!GO:0000166;nucleotide binding;6.47044586978126e-16!GO:0044249;cellular biosynthetic process;6.7555903085782e-16!GO:0022607;cellular component assembly;8.88071846329023e-16!GO:0009059;macromolecule biosynthetic process;3.58770358388266e-15!GO:0031982;vesicle;8.0369795500524e-15!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;9.04103789523061e-15!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;9.75067790386733e-15!GO:0016817;hydrolase activity, acting on acid anhydrides;1.17480890479415e-14!GO:0050136;NADH dehydrogenase (quinone) activity;1.35439996329914e-14!GO:0003954;NADH dehydrogenase activity;1.35439996329914e-14!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.35439996329914e-14!GO:0016462;pyrophosphatase activity;1.36374700820552e-14!GO:0005746;mitochondrial respiratory chain;1.59160044954936e-14!GO:0031410;cytoplasmic vesicle;5.51571589764513e-14!GO:0017111;nucleoside-triphosphatase activity;6.09893130385594e-14!GO:0031988;membrane-bound vesicle;9.88377051556791e-14!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.63493413207894e-13!GO:0012505;endomembrane system;1.9845343676633e-13!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.1308518475179e-13!GO:0044445;cytosolic part;2.68960456396052e-13!GO:0016023;cytoplasmic membrane-bound vesicle;6.44950113193105e-13!GO:0006457;protein folding;6.92655811981743e-13!GO:0043283;biopolymer metabolic process;9.59908088604966e-13!GO:0006512;ubiquitin cycle;1.26370978817354e-12!GO:0030964;NADH dehydrogenase complex (quinone);1.46007941376484e-12!GO:0045271;respiratory chain complex I;1.46007941376484e-12!GO:0005747;mitochondrial respiratory chain complex I;1.46007941376484e-12!GO:0042775;organelle ATP synthesis coupled electron transport;2.39705521588244e-12!GO:0042773;ATP synthesis coupled electron transport;2.39705521588244e-12!GO:0043228;non-membrane-bound organelle;2.58437532613858e-12!GO:0043232;intracellular non-membrane-bound organelle;2.58437532613858e-12!GO:0031980;mitochondrial lumen;2.58437532613858e-12!GO:0005759;mitochondrial matrix;2.58437532613858e-12!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;4.04077058063565e-12!GO:0022618;protein-RNA complex assembly;9.9159024635499e-12!GO:0032553;ribonucleotide binding;1.43999181073554e-11!GO:0032555;purine ribonucleotide binding;1.43999181073554e-11!GO:0016874;ligase activity;2.25360415537365e-11!GO:0048193;Golgi vesicle transport;4.12907311980947e-11!GO:0048770;pigment granule;4.56326977148494e-11!GO:0042470;melanosome;4.56326977148494e-11!GO:0017076;purine nucleotide binding;6.95772428532838e-11!GO:0010467;gene expression;9.36888803589464e-11!GO:0005654;nucleoplasm;1.66317263799199e-10!GO:0043412;biopolymer modification;1.89995554813573e-10!GO:0043687;post-translational protein modification;3.17997958565744e-10!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.20468053343103e-10!GO:0008135;translation factor activity, nucleic acid binding;3.42210340769909e-10!GO:0019829;cation-transporting ATPase activity;4.32660804382439e-10!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;6.30013810487328e-10!GO:0045045;secretory pathway;8.6364363537383e-10!GO:0006605;protein targeting;9.51559566521206e-10!GO:0006464;protein modification process;9.51559566521206e-10!GO:0015934;large ribosomal subunit;1.19386770690876e-09!GO:0044451;nucleoplasm part;1.27493974349578e-09!GO:0051082;unfolded protein binding;1.28860758653413e-09!GO:0003924;GTPase activity;1.35618626734355e-09!GO:0015935;small ribosomal subunit;1.41593573102528e-09!GO:0000502;proteasome complex (sensu Eukaryota);4.20876625218555e-09!GO:0051603;proteolysis involved in cellular protein catabolic process;6.40335680820308e-09!GO:0008565;protein transporter activity;6.8144451114149e-09!GO:0006511;ubiquitin-dependent protein catabolic process;7.38079408402406e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.06659711441647e-09!GO:0006793;phosphorus metabolic process;9.37843870255812e-09!GO:0006796;phosphate metabolic process;9.37843870255812e-09!GO:0019941;modification-dependent protein catabolic process;9.70440645047105e-09!GO:0043632;modification-dependent macromolecule catabolic process;9.70440645047105e-09!GO:0000398;nuclear mRNA splicing, via spliceosome;9.77688881306451e-09!GO:0000375;RNA splicing, via transesterification reactions;9.77688881306451e-09!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.77688881306451e-09!GO:0044257;cellular protein catabolic process;1.11697142320161e-08!GO:0016044;membrane organization and biogenesis;1.25180283339474e-08!GO:0008092;cytoskeletal protein binding;1.39069659213632e-08!GO:0006446;regulation of translational initiation;3.05272115122721e-08!GO:0044265;cellular macromolecule catabolic process;3.12571133428944e-08!GO:0015630;microtubule cytoskeleton;3.54006130388618e-08!GO:0030695;GTPase regulator activity;4.63266950296295e-08!GO:0015986;ATP synthesis coupled proton transport;4.70742713443252e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;4.70742713443252e-08!GO:0008134;transcription factor binding;4.99544052384955e-08!GO:0006413;translational initiation;5.19875947740086e-08!GO:0016604;nuclear body;6.86370399043068e-08!GO:0005525;GTP binding;9.48510184132306e-08!GO:0051186;cofactor metabolic process;1.08942184708581e-07!GO:0007264;small GTPase mediated signal transduction;1.08942184708581e-07!GO:0005783;endoplasmic reticulum;1.16284492559174e-07!GO:0003743;translation initiation factor activity;1.20155533854619e-07!GO:0044431;Golgi apparatus part;1.20270566760749e-07!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.24659272054655e-07!GO:0007010;cytoskeleton organization and biogenesis;1.56953375749284e-07!GO:0016607;nuclear speck;1.935453977702e-07!GO:0005761;mitochondrial ribosome;2.09143518380626e-07!GO:0000313;organellar ribosome;2.09143518380626e-07!GO:0030135;coated vesicle;2.09695911772386e-07!GO:0044248;cellular catabolic process;2.29275410776295e-07!GO:0009060;aerobic respiration;2.69761641652275e-07!GO:0005768;endosome;3.22847624893266e-07!GO:0030163;protein catabolic process;3.75323921861342e-07!GO:0043285;biopolymer catabolic process;3.75323921861342e-07!GO:0006461;protein complex assembly;4.50991691524152e-07!GO:0008639;small protein conjugating enzyme activity;4.95525800904324e-07!GO:0046034;ATP metabolic process;5.11080439710052e-07!GO:0006810;transport;6.98428723251762e-07!GO:0004842;ubiquitin-protein ligase activity;7.04029046841973e-07!GO:0005730;nucleolus;7.53282050015108e-07!GO:0009141;nucleoside triphosphate metabolic process;7.86738807636317e-07!GO:0045333;cellular respiration;8.37016820943616e-07!GO:0016310;phosphorylation;9.74945023402572e-07!GO:0032561;guanyl ribonucleotide binding;1.05473530915917e-06!GO:0019001;guanyl nucleotide binding;1.05473530915917e-06!GO:0006913;nucleocytoplasmic transport;1.13783137643143e-06!GO:0031965;nuclear membrane;1.22654331149504e-06!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;1.30427604955124e-06!GO:0048471;perinuclear region of cytoplasm;1.37883911502684e-06!GO:0016469;proton-transporting two-sector ATPase complex;1.405063724988e-06!GO:0006754;ATP biosynthetic process;1.405063724988e-06!GO:0006753;nucleoside phosphate metabolic process;1.405063724988e-06!GO:0051169;nuclear transport;1.55706648990845e-06!GO:0030036;actin cytoskeleton organization and biogenesis;1.63158737655841e-06!GO:0019787;small conjugating protein ligase activity;1.91224983427809e-06!GO:0009205;purine ribonucleoside triphosphate metabolic process;1.91224983427809e-06!GO:0009144;purine nucleoside triphosphate metabolic process;1.91224983427809e-06!GO:0032559;adenyl ribonucleotide binding;2.06092692886437e-06!GO:0051179;localization;2.25502781175968e-06!GO:0009199;ribonucleoside triphosphate metabolic process;2.30466195245036e-06!GO:0032940;secretion by cell;2.6817024530981e-06!GO:0015078;hydrogen ion transmembrane transporter activity;2.78249478206906e-06!GO:0009057;macromolecule catabolic process;3.17720591192922e-06!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);3.44435014626339e-06!GO:0006163;purine nucleotide metabolic process;3.49068721919327e-06!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;3.78933770487858e-06!GO:0005083;small GTPase regulator activity;3.938459821411e-06!GO:0005635;nuclear envelope;4.35946556427591e-06!GO:0005524;ATP binding;4.57049683853056e-06!GO:0015631;tubulin binding;4.82493829137213e-06!GO:0048475;coated membrane;4.92087132518337e-06!GO:0030117;membrane coat;4.92087132518337e-06!GO:0005874;microtubule;4.97796607380132e-06!GO:0015077;monovalent inorganic cation transmembrane transporter activity;5.34286384822724e-06!GO:0009150;purine ribonucleotide metabolic process;5.45689802210244e-06!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;7.21507743321596e-06!GO:0009145;purine nucleoside triphosphate biosynthetic process;7.21507743321596e-06!GO:0048523;negative regulation of cellular process;7.2205818455944e-06!GO:0030554;adenyl nucleotide binding;7.60920778968688e-06!GO:0045259;proton-transporting ATP synthase complex;7.99809189540626e-06!GO:0043005;neuron projection;8.74230960716693e-06!GO:0009142;nucleoside triphosphate biosynthetic process;8.84232876619059e-06!GO:0009201;ribonucleoside triphosphate biosynthetic process;8.84232876619059e-06!GO:0006164;purine nucleotide biosynthetic process;8.97242919729545e-06!GO:0009259;ribonucleotide metabolic process;9.6251378197389e-06!GO:0000139;Golgi membrane;1.04446209740924e-05!GO:0016881;acid-amino acid ligase activity;1.11922846789199e-05!GO:0016887;ATPase activity;1.20045042441572e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.39335239092229e-05!GO:0009055;electron carrier activity;1.42671403781386e-05!GO:0007399;nervous system development;1.49033047374278e-05!GO:0030029;actin filament-based process;1.61117606434917e-05!GO:0006099;tricarboxylic acid cycle;1.61117606434917e-05!GO:0046356;acetyl-CoA catabolic process;1.61117606434917e-05!GO:0006732;coenzyme metabolic process;1.6890078239497e-05!GO:0006897;endocytosis;1.94405302157325e-05!GO:0010324;membrane invagination;1.94405302157325e-05!GO:0031252;leading edge;2.4568342259815e-05!GO:0005905;coated pit;2.48629674015405e-05!GO:0051234;establishment of localization;2.80136588530765e-05!GO:0042623;ATPase activity, coupled;2.89453149476733e-05!GO:0019717;synaptosome;3.42816018124786e-05!GO:0051246;regulation of protein metabolic process;3.52604530714662e-05!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.16273337055749e-05!GO:0007242;intracellular signaling cascade;4.21906116930642e-05!GO:0044432;endoplasmic reticulum part;4.37639222659327e-05!GO:0009260;ribonucleotide biosynthetic process;4.37639222659327e-05!GO:0019899;enzyme binding;4.50896233081631e-05!GO:0006084;acetyl-CoA metabolic process;4.71422780815224e-05!GO:0009109;coenzyme catabolic process;4.76022641437588e-05!GO:0006403;RNA localization;4.8237907787349e-05!GO:0051128;regulation of cellular component organization and biogenesis;4.85867564787844e-05!GO:0008287;protein serine/threonine phosphatase complex;5.132747640385e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;5.82860368181078e-05!GO:0015399;primary active transmembrane transporter activity;5.82860368181078e-05!GO:0005875;microtubule associated complex;6.02506830504817e-05!GO:0050657;nucleic acid transport;6.04863090345327e-05!GO:0051236;establishment of RNA localization;6.04863090345327e-05!GO:0050658;RNA transport;6.04863090345327e-05!GO:0008047;enzyme activator activity;6.72285405714092e-05!GO:0030120;vesicle coat;7.30004241657328e-05!GO:0030662;coated vesicle membrane;7.30004241657328e-05!GO:0000245;spliceosome assembly;8.57866253870767e-05!GO:0032446;protein modification by small protein conjugation;8.69919876339784e-05!GO:0005643;nuclear pore;9.22183868870865e-05!GO:0044440;endosomal part;9.31219347187262e-05!GO:0010008;endosome membrane;9.31219347187262e-05!GO:0042175;nuclear envelope-endoplasmic reticulum network;0.000100470045582498!GO:0005769;early endosome;0.000108314591832833!GO:0031202;RNA splicing factor activity, transesterification mechanism;0.000110747988665381!GO:0048519;negative regulation of biological process;0.000113151661672264!GO:0003712;transcription cofactor activity;0.000114141161426456!GO:0016567;protein ubiquitination;0.000117041434517835!GO:0051187;cofactor catabolic process;0.000118715504729087!GO:0044453;nuclear membrane part;0.000130669326469895!GO:0005789;endoplasmic reticulum membrane;0.000130727165757684!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.000154099833735397!GO:0005096;GTPase activator activity;0.000159081716524366!GO:0022890;inorganic cation transmembrane transporter activity;0.000161066470718379!GO:0003779;actin binding;0.000165278058055323!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.000172433338903534!GO:0006888;ER to Golgi vesicle-mediated transport;0.000191101918672719!GO:0017038;protein import;0.000192478508033875!GO:0008017;microtubule binding;0.000196957844211372!GO:0016564;transcription repressor activity;0.000196957844211372!GO:0030425;dendrite;0.000224289314322044!GO:0006613;cotranslational protein targeting to membrane;0.000230280399249792!GO:0030136;clathrin-coated vesicle;0.000233372559643363!GO:0009056;catabolic process;0.000247759694286098!GO:0006325;establishment and/or maintenance of chromatin architecture;0.000271094760211687!GO:0043492;ATPase activity, coupled to movement of substances;0.00029407686339658!GO:0000159;protein phosphatase type 2A complex;0.000325418089865437!GO:0005516;calmodulin binding;0.000352074140892286!GO:0045786;negative regulation of progression through cell cycle;0.000355494549052147!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.00036992572876882!GO:0043566;structure-specific DNA binding;0.000378034125011171!GO:0005798;Golgi-associated vesicle;0.000379039069580207!GO:0000902;cell morphogenesis;0.000402525999024358!GO:0032989;cellular structure morphogenesis;0.000402525999024358!GO:0006752;group transfer coenzyme metabolic process;0.000409701117600348!GO:0006259;DNA metabolic process;0.000419941586301597!GO:0008219;cell death;0.000435535982175715!GO:0016265;death;0.000435535982175715!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000459354639153368!GO:0051188;cofactor biosynthetic process;0.000464704158489939!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;0.000556655290275959!GO:0019208;phosphatase regulator activity;0.000557898016090255!GO:0003714;transcription corepressor activity;0.000565339077806862!GO:0008601;protein phosphatase type 2A regulator activity;0.000602551189463998!GO:0005770;late endosome;0.000616925830344529!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000629196880873286!GO:0000151;ubiquitin ligase complex;0.000631689058846811!GO:0006323;DNA packaging;0.000671572523077535!GO:0008654;phospholipid biosynthetic process;0.000737716850017331!GO:0051028;mRNA transport;0.000813749683185746!GO:0003724;RNA helicase activity;0.00082075091934854!GO:0030133;transport vesicle;0.000844835573788786!GO:0012501;programmed cell death;0.000864699247183096!GO:0030027;lamellipodium;0.000867819344739995!GO:0006915;apoptosis;0.000995924348696206!GO:0030532;small nuclear ribonucleoprotein complex;0.00104428400109008!GO:0009117;nucleotide metabolic process;0.00118084851586607!GO:0003697;single-stranded DNA binding;0.00118908248769919!GO:0016070;RNA metabolic process;0.00135666973955163!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.0014066881729022!GO:0043069;negative regulation of programmed cell death;0.00148024871490278!GO:0015980;energy derivation by oxidation of organic compounds;0.00149443182758924!GO:0016197;endosome transport;0.00152614070889147!GO:0005741;mitochondrial outer membrane;0.00155532899120284!GO:0016050;vesicle organization and biogenesis;0.00155900687569607!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00158823132692105!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00158823132692105!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00158823132692105!GO:0043066;negative regulation of apoptosis;0.00177934647222102!GO:0016301;kinase activity;0.0018197342771096!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00183629090319935!GO:0019888;protein phosphatase regulator activity;0.00186780010071612!GO:0031072;heat shock protein binding;0.00198963003186657!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;0.00211984775380606!GO:0006612;protein targeting to membrane;0.00213141081773907!GO:0005048;signal sequence binding;0.00213254224498712!GO:0004674;protein serine/threonine kinase activity;0.00227170268530564!GO:0005839;proteasome core complex (sensu Eukaryota);0.00227376736215275!GO:0005813;centrosome;0.00235176938692437!GO:0046467;membrane lipid biosynthetic process;0.00240134179769489!GO:0004386;helicase activity;0.00243576049836808!GO:0022406;membrane docking;0.00246215894106979!GO:0048278;vesicle docking;0.00246215894106979!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;0.0024680527642728!GO:0004812;aminoacyl-tRNA ligase activity;0.0024680527642728!GO:0016875;ligase activity, forming carbon-oxygen bonds;0.0024680527642728!GO:0048489;synaptic vesicle transport;0.00247764191137127!GO:0043038;amino acid activation;0.00253034041495744!GO:0006418;tRNA aminoacylation for protein translation;0.00253034041495744!GO:0043039;tRNA aminoacylation;0.00253034041495744!GO:0006606;protein import into nucleus;0.00267858757855412!GO:0030426;growth cone;0.0026846498779858!GO:0008026;ATP-dependent helicase activity;0.00277094791120537!GO:0065002;intracellular protein transport across a membrane;0.00278596680333211!GO:0030427;site of polarized growth;0.00293051657472508!GO:0006916;anti-apoptosis;0.00293974868291948!GO:0006891;intra-Golgi vesicle-mediated transport;0.0030251484860139!GO:0005793;ER-Golgi intermediate compartment;0.00307779793574269!GO:0051170;nuclear import;0.00312138258763281!GO:0005773;vacuole;0.0033680617378527!GO:0030118;clathrin coat;0.00338639985523734!GO:0009108;coenzyme biosynthetic process;0.00341164138563623!GO:0006414;translational elongation;0.00351977974328254!GO:0016791;phosphoric monoester hydrolase activity;0.0036384961425753!GO:0007017;microtubule-based process;0.00366607216554825!GO:0046930;pore complex;0.00369759438846388!GO:0007265;Ras protein signal transduction;0.00370399998034702!GO:0006607;NLS-bearing substrate import into nucleus;0.00377152221869274!GO:0006904;vesicle docking during exocytosis;0.00396910349239346!GO:0007019;microtubule depolymerization;0.00404861827999772!GO:0004721;phosphoprotein phosphatase activity;0.00404861827999772!GO:0051056;regulation of small GTPase mediated signal transduction;0.00414908363935953!GO:0045187;regulation of circadian sleep/wake cycle, sleep;0.00430058814978633!GO:0004667;prostaglandin-D synthase activity;0.00430058814978633!GO:0050802;circadian sleep/wake cycle, sleep;0.00430058814978633!GO:0022410;circadian sleep/wake cycle process;0.00430058814978633!GO:0042749;regulation of circadian sleep/wake cycle;0.00430058814978633!GO:0045055;regulated secretory pathway;0.00430058814978633!GO:0031901;early endosome membrane;0.00444302194313651!GO:0019226;transmission of nerve impulse;0.00447911157725877!GO:0031968;organelle outer membrane;0.00449419360217068!GO:0051168;nuclear export;0.00453118277750905!GO:0008154;actin polymerization and/or depolymerization;0.00465803499416205!GO:0019867;outer membrane;0.00465803499416205!GO:0009966;regulation of signal transduction;0.00466785075718414!GO:0051087;chaperone binding;0.00469907979484669!GO:0051129;negative regulation of cellular component organization and biogenesis;0.00494615779099795!GO:0001505;regulation of neurotransmitter levels;0.00502086721986931!GO:0005938;cell cortex;0.00508768849993576!GO:0006333;chromatin assembly or disassembly;0.00515995683396997!GO:0048487;beta-tubulin binding;0.00520603563787932!GO:0005815;microtubule organizing center;0.00532351517593853!GO:0051920;peroxiredoxin activity;0.00540355779986583!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.00551562054374932!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00555945417332117!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00561201188251947!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00567984840647866!GO:0016311;dephosphorylation;0.00571127878918703!GO:0048468;cell development;0.00571387118480311!GO:0030320;cellular monovalent inorganic anion homeostasis;0.00606396873589204!GO:0055083;monovalent inorganic anion homeostasis;0.00606396873589204!GO:0055064;chloride ion homeostasis;0.00606396873589204!GO:0030644;cellular chloride ion homeostasis;0.00606396873589204!GO:0003729;mRNA binding;0.00658723001680998!GO:0000314;organellar small ribosomal subunit;0.00662461891861357!GO:0005763;mitochondrial small ribosomal subunit;0.00662461891861357!GO:0006366;transcription from RNA polymerase II promoter;0.00682992272348971!GO:0006650;glycerophospholipid metabolic process;0.00691115379071342!GO:0051427;hormone receptor binding;0.00705257340634728!GO:0043623;cellular protein complex assembly;0.00726486701660176!GO:0006892;post-Golgi vesicle-mediated transport;0.00736252401983378!GO:0031111;negative regulation of microtubule polymerization or depolymerization;0.00737595881532196!GO:0004298;threonine endopeptidase activity;0.00774221705896541!GO:0007269;neurotransmitter secretion;0.00774221705896541!GO:0019902;phosphatase binding;0.00776625679788121!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00783210825669992!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00783210825669992!GO:0008186;RNA-dependent ATPase activity;0.00783210825669992!GO:0005085;guanyl-nucleotide exchange factor activity;0.00783210825669992!GO:0046870;cadmium ion binding;0.00803240039082808!GO:0001726;ruffle;0.00816776688251462!GO:0031124;mRNA 3'-end processing;0.00823890678644305!GO:0005868;cytoplasmic dynein complex;0.00826837940445933!GO:0012506;vesicle membrane;0.00830989909218262!GO:0042254;ribosome biogenesis and assembly;0.00840125768421001!GO:0044448;cell cortex part;0.00847462283014489!GO:0003676;nucleic acid binding;0.00847780473198096!GO:0051726;regulation of cell cycle;0.00864401060613906!GO:0016568;chromatin modification;0.00867971260367251!GO:0007272;ensheathment of neurons;0.00895115846577046!GO:0008366;axon ensheathment;0.00895115846577046!GO:0043209;myelin sheath;0.00939357120130515!GO:0006643;membrane lipid metabolic process;0.00962172948772681!GO:0030867;rough endoplasmic reticulum membrane;0.00975379486886399!GO:0016859;cis-trans isomerase activity;0.010007449073952!GO:0003690;double-stranded DNA binding;0.0100440856304866!GO:0006470;protein amino acid dephosphorylation;0.0101802229403158!GO:0007049;cell cycle;0.010471132398105!GO:0033673;negative regulation of kinase activity;0.0104884071944931!GO:0006469;negative regulation of protein kinase activity;0.0104884071944931!GO:0031114;regulation of microtubule depolymerization;0.0106396741801236!GO:0007026;negative regulation of microtubule depolymerization;0.0106396741801236!GO:0009165;nucleotide biosynthetic process;0.0106396741801236!GO:0035257;nuclear hormone receptor binding;0.0110417622934253!GO:0006665;sphingolipid metabolic process;0.0112849744588762!GO:0030865;cortical cytoskeleton organization and biogenesis;0.0113395307892077!GO:0008139;nuclear localization sequence binding;0.0116231712951159!GO:0050811;GABA receptor binding;0.0117642395728946!GO:0000074;regulation of progression through cell cycle;0.0118976356534637!GO:0006402;mRNA catabolic process;0.0121361514965278!GO:0048500;signal recognition particle;0.0122555773145348!GO:0001578;microtubule bundle formation;0.0124327349433571!GO:0005100;Rho GTPase activator activity;0.0125719311135342!GO:0003746;translation elongation factor activity;0.0128081610537964!GO:0008250;oligosaccharyl transferase complex;0.0132026393241619!GO:0030137;COPI-coated vesicle;0.0134135912590713!GO:0008286;insulin receptor signaling pathway;0.0134519624000263!GO:0050789;regulation of biological process;0.0135037894752697!GO:0050767;regulation of neurogenesis;0.0135245467668568!GO:0043021;ribonucleoprotein binding;0.013960849998077!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.0140767546489214!GO:0051261;protein depolymerization;0.0141223002668323!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.0149585745408993!GO:0009892;negative regulation of metabolic process;0.0151299688102546!GO:0008361;regulation of cell size;0.0152579928097962!GO:0005791;rough endoplasmic reticulum;0.0154072361893703!GO:0030258;lipid modification;0.0156220774060101!GO:0042578;phosphoric ester hydrolase activity;0.0156943925383959!GO:0006100;tricarboxylic acid cycle intermediate metabolic process;0.0157107454182204!GO:0035035;histone acetyltransferase binding;0.0158337794720593!GO:0005885;Arp2/3 protein complex;0.015838614859912!GO:0005762;mitochondrial large ribosomal subunit;0.0158951117473772!GO:0000315;organellar large ribosomal subunit;0.0158951117473772!GO:0051348;negative regulation of transferase activity;0.0160375561337133!GO:0000323;lytic vacuole;0.0165109923406965!GO:0005764;lysosome;0.0165109923406965!GO:0007005;mitochondrion organization and biogenesis;0.0167215335936105!GO:0003711;transcription elongation regulator activity;0.0176227386717523!GO:0008021;synaptic vesicle;0.0176227386717523!GO:0016363;nuclear matrix;0.0176355047621904!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0181964767464765!GO:0005869;dynactin complex;0.0182661330723848!GO:0030286;dynein complex;0.0184685030859682!GO:0004004;ATP-dependent RNA helicase activity;0.0186280498167116!GO:0044433;cytoplasmic vesicle part;0.0186280498167116!GO:0001666;response to hypoxia;0.0187585538405945!GO:0007243;protein kinase cascade;0.0191808372542594!GO:0030866;cortical actin cytoskeleton organization and biogenesis;0.0192932018560403!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.0199011728249067!GO:0045047;protein targeting to ER;0.0199011728249067!GO:0031123;RNA 3'-end processing;0.0201334199283511!GO:0019887;protein kinase regulator activity;0.0201401227640648!GO:0048167;regulation of synaptic plasticity;0.020564338403199!GO:0030384;phosphoinositide metabolic process;0.0208119710618375!GO:0019904;protein domain specific binding;0.020998034068315!GO:0060052;neurofilament cytoskeleton organization and biogenesis;0.021525261189444!GO:0006399;tRNA metabolic process;0.021736918075087!GO:0042026;protein refolding;0.0218478885512053!GO:0006818;hydrogen transport;0.0224350184227728!GO:0008312;7S RNA binding;0.0227714260754781!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.0227714260754781!GO:0051252;regulation of RNA metabolic process;0.0228431952853965!GO:0001508;regulation of action potential;0.0237242214728031!GO:0016740;transferase activity;0.0238419894322975!GO:0030658;transport vesicle membrane;0.0240235487190472!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.0241572305569557!GO:0006974;response to DNA damage stimulus;0.0242114299240321!GO:0017091;AU-rich element binding;0.0242859317898427!GO:0050779;RNA destabilization;0.0242859317898427!GO:0000289;poly(A) tail shortening;0.0242859317898427!GO:0051540;metal cluster binding;0.0244081602495947!GO:0051536;iron-sulfur cluster binding;0.0244081602495947!GO:0016049;cell growth;0.0251293676927901!GO:0030041;actin filament polymerization;0.0252152983174573!GO:0050839;cell adhesion molecule binding;0.0252982277733292!GO:0051539;4 iron, 4 sulfur cluster binding;0.0256837560253313!GO:0030030;cell projection organization and biogenesis;0.0257549668779959!GO:0048858;cell projection morphogenesis;0.0257549668779959!GO:0032990;cell part morphogenesis;0.0257549668779959!GO:0030742;GTP-dependent protein binding;0.0259870296191852!GO:0030175;filopodium;0.0265964237743397!GO:0042995;cell projection;0.0267575567905344!GO:0050794;regulation of cellular process;0.0270158904956064!GO:0015992;proton transport;0.0275067570095881!GO:0051276;chromosome organization and biogenesis;0.0289062810475748!GO:0030660;Golgi-associated vesicle membrane;0.0296288803449768!GO:0007034;vacuolar transport;0.030500762742032!GO:0007050;cell cycle arrest;0.0312998834506071!GO:0006091;generation of precursor metabolites and energy;0.031586792174988!GO:0030569;chymotrypsin inhibitor activity;0.0318537553927946!GO:0031371;ubiquitin conjugating enzyme complex;0.0321837929264853!GO:0030132;clathrin coat of coated pit;0.0321989088181277!GO:0008180;signalosome;0.0321989088181277!GO:0000209;protein polyubiquitination;0.0323339704966194!GO:0003725;double-stranded RNA binding;0.0325486434717349!GO:0050803;regulation of synapse structure and activity;0.0334800501933854!GO:0016272;prefoldin complex;0.0334800501933854!GO:0065004;protein-DNA complex assembly;0.0343522554393514!GO:0006672;ceramide metabolic process;0.0344264882809609!GO:0030663;COPI coated vesicle membrane;0.0344362994547172!GO:0030126;COPI vesicle coat;0.0344362994547172!GO:0004722;protein serine/threonine phosphatase activity;0.0366257403434563!GO:0035258;steroid hormone receptor binding;0.0368420917435091!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.0368432053356997!GO:0004683;calmodulin-dependent protein kinase activity;0.0371742855890374!GO:0031109;microtubule polymerization or depolymerization;0.0372223177103814!GO:0019911;structural constituent of myelin sheath;0.03869169390828!GO:0015629;actin cytoskeleton;0.0403664239391169!GO:0006611;protein export from nucleus;0.040695804610091!GO:0043488;regulation of mRNA stability;0.040993664272737!GO:0043487;regulation of RNA stability;0.040993664272737!GO:0016615;malate dehydrogenase activity;0.0410546672661478!GO:0030659;cytoplasmic vesicle membrane;0.0416049657475618!GO:0042176;regulation of protein catabolic process;0.0420673642396154!GO:0005001;transmembrane receptor protein tyrosine phosphatase activity;0.0430302411819572!GO:0019198;transmembrane receptor protein phosphatase activity;0.0430302411819572!GO:0001540;beta-amyloid binding;0.0430713656581842!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.0432530615984724!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.0435611034699022!GO:0033043;regulation of organelle organization and biogenesis;0.0435611034699022!GO:0004576;oligosaccharyl transferase activity;0.0437489632003404!GO:0000059;protein import into nucleus, docking;0.0439793781103838!GO:0046474;glycerophospholipid biosynthetic process;0.0439793781103838!GO:0005099;Ras GTPase activator activity;0.0455938534476364!GO:0046519;sphingoid metabolic process;0.045982640378335!GO:0019894;kinesin binding;0.0462257677810182!GO:0042802;identical protein binding;0.0469314133760906!GO:0019207;kinase regulator activity;0.0476289666940361!GO:0043086;negative regulation of catalytic activity;0.0477059221632014!GO:0003713;transcription coactivator activity;0.0480201897098622!GO:0046578;regulation of Ras protein signal transduction;0.0488396489114746!GO:0030127;COPII vesicle coat;0.0496374279534516!GO:0012507;ER to Golgi transport vesicle membrane;0.0496374279534516!GO:0006383;transcription from RNA polymerase III promoter;0.0497079477385746!GO:0043284;biopolymer biosynthetic process;0.0499345424645107
 
|sample_id=10177
 
|sample_id=10177
 
|sample_note=
 
|sample_note=
Line 76: Line 100:
 
|sample_tissue=caudate nucleus
 
|sample_tissue=caudate nucleus
 
|top_motifs=RFX1:3.97346696458;MYFfamily:3.24655563576;ATF2:3.16594569189;AHR_ARNT_ARNT2:3.02069781595;OCT4_SOX2{dimer}:2.99877970891;HOXA9_MEIS1:2.97308312613;RFX2..5_RFXANK_RFXAP:2.94381712358;REST:2.88630914548;NHLH1,2:2.85582946786;SOX2:2.85179855517;MED-1{core}:2.84859001684;ZFP161:2.73941879369;SOX5:2.73860447528;DBP:2.52365820895;PAX5:2.50191947854;PRRX1,2:2.49062350322;MTF1:2.47260688856;PRDM1:2.41585762123;HBP1_HMGB_SSRP1_UBTF:2.39321985258;XBP1:2.35852768356;NFIX:2.34688668548;MTE{core}:2.26372455519;EGR1..3:2.21675411849;GATA4:2.10217041472;GTF2I:2.09856574673;SOX{8,9,10}:2.08486872794;TLX2:2.0727737061;NKX3-2:2.05856036151;ZBTB6:2.05414812139;ARID5B:2.04279531067;CUX2:2.00629891789;RREB1:1.99138708696;STAT1,3:1.97707826111;FOXM1:1.9385610099;MZF1:1.92174639773;MAFB:1.91294340604;TGIF1:1.84194594901;GFI1B:1.81985787135;SOX17:1.81482050516;PAX1,9:1.7501983892;CDC5L:1.68431977831;SMAD1..7,9:1.67209721476;NKX6-1,2:1.66688675466;POU6F1:1.62418216517;HMX1:1.62247972279;T:1.61286239261;RBPJ:1.60834948173;VSX1,2:1.58298693442;JUN:1.56773093931;HIC1:1.55421513715;KLF4:1.51997180557;TFAP2B:1.51157561913;LMO2:1.48465994799;MAZ:1.46521253879;STAT2,4,6:1.4348508566;HOX{A4,D4}:1.42795675921;PAX6:1.40984339022;LEF1_TCF7_TCF7L1,2:1.37700274147;NFIL3:1.36375477831;NRF1:1.3013157805;BREu{core}:1.29845190983;NKX2-3_NKX2-5:1.28459770638;PATZ1:1.25258998429;NANOG:1.20048251291;AR:1.19656126347;LHX3,4:1.1835632771;PBX1:1.14821962337;FOXN1:1.12878099055;FOXP3:1.12104474319;ADNP_IRX_SIX_ZHX:1.11845212421;PDX1:1.09645490845;ESRRA:1.0729039102;ZNF384:0.995655661422;EP300:0.984009224491;CREB1:0.976851626259;CRX:0.969078223756;ALX1:0.962118992268;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.913600376753;ZBTB16:0.909929681921;MYBL2:0.841722475593;MYOD1:0.828804917512;SP1:0.805570188124;GTF2A1,2:0.791492256145;IKZF2:0.775867844713;POU5F1:0.761707591023;HMGA1,2:0.749857937371;RORA:0.740430458198;GFI1:0.711929263773;TFAP2{A,C}:0.682621677479;BPTF:0.676919842198;ZNF238:0.667563737779;SREBF1,2:0.652962612455;FOX{F1,F2,J1}:0.630354067355;ZIC1..3:0.600846710394;ZEB1:0.597710101956;TLX1..3_NFIC{dimer}:0.550788724768;ONECUT1,2:0.517580840772;PAX2:0.509607779693;ZNF143:0.481554825091;NR3C1:0.468033842153;PAX4:0.40852953243;ATF4:0.397693432819;MEF2{A,B,C,D}:0.360261900564;POU1F1:0.347900008616;FOXP1:0.341939850366;FOXD3:0.3348096632;TBX4,5:0.311054700239;HOX{A6,A7,B6,B7}:0.28753190486;IRF7:0.287291137539;SPZ1:0.280342761467;POU3F1..4:0.26138076428;ZNF423:0.227081347509;FOXO1,3,4:0.219226243509;EBF1:0.181290642794;TFDP1:0.17160014233;GZF1:0.151013532583;FOX{D1,D2}:0.135893147998;FOX{I1,J2}:0.0925931398258;ATF5_CREB3:0.0408119797529;HAND1,2:-0.0103099633523;CEBPA,B_DDIT3:-0.0121496299391;ATF6:-0.02018254328;NFY{A,B,C}:-0.081112118148;PAX8:-0.0882415673384;TOPORS:-0.174122486486;IKZF1:-0.200609890393;NFATC1..3:-0.223840157454;UFEwm:-0.246948939535;FOXL1:-0.26455489165;IRF1,2:-0.275446400215;YY1:-0.28816593255;NFE2:-0.312130879721;bHLH_family:-0.352725463098;CDX1,2,4:-0.356320971541;GCM1,2:-0.367033209541;GATA6:-0.372340430449;TBP:-0.433469718245;DMAP1_NCOR{1,2}_SMARC:-0.440342101283;NFE2L2:-0.452511363905;SPI1:-0.477148811656;SNAI1..3:-0.493593226703;NANOG{mouse}:-0.525867429756;EVI1:-0.543819703334;PITX1..3:-0.562678489617;NKX3-1:-0.573205893946;HIF1A:-0.579082420248;NFE2L1:-0.580204653657;TFCP2:-0.59511096662;HES1:-0.635653085552;FOXQ1:-0.63865938481;HSF1,2:-0.639235548326;NKX2-1,4:-0.680333240478;FOXA2:-0.709023713889;ETS1,2:-0.715529023948;RXR{A,B,G}:-0.724494034708;FOS_FOS{B,L1}_JUN{B,D}:-0.733169214003;SPIB:-0.749668631755;HNF4A_NR2F1,2:-0.752052366972;FOSL2:-0.766422043141;HNF1A:-0.796412312568;NR1H4:-0.804008693586;XCPE1{core}:-0.848433281932;TEAD1:-0.88584714327;BACH2:-0.88623690794;TEF:-0.893979780586;TFAP4:-0.977877628875;MYB:-1.02363376659;PAX3,7:-1.03462761219;HLF:-1.06249996415;NFKB1_REL_RELA:-1.07775858646;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.08362975682;ALX4:-1.10775040028;RUNX1..3:-1.14278977741;TP53:-1.15120858168;AIRE:-1.18387003726;NR5A1,2:-1.23770548734;SRF:-1.23823690694;POU2F1..3:-1.26899796409;GLI1..3:-1.2764514915;ELF1,2,4:-1.30000273852;E2F1..5:-1.32660155888;ELK1,4_GABP{A,B1}:-1.46644495259;NKX2-2,8:-1.55922637955;ESR1:-1.56351981799;ZNF148:-1.57103162009;RXRA_VDR{dimer}:-1.60695359306;TAL1_TCF{3,4,12}:-1.71304408974;NR6A1:-1.87818359804;STAT5{A,B}:-1.94996207013;HOX{A5,B5}:-2.05360367771;EN1,2:-2.53738039254;PPARG:-2.69280659749
 
|top_motifs=RFX1:3.97346696458;MYFfamily:3.24655563576;ATF2:3.16594569189;AHR_ARNT_ARNT2:3.02069781595;OCT4_SOX2{dimer}:2.99877970891;HOXA9_MEIS1:2.97308312613;RFX2..5_RFXANK_RFXAP:2.94381712358;REST:2.88630914548;NHLH1,2:2.85582946786;SOX2:2.85179855517;MED-1{core}:2.84859001684;ZFP161:2.73941879369;SOX5:2.73860447528;DBP:2.52365820895;PAX5:2.50191947854;PRRX1,2:2.49062350322;MTF1:2.47260688856;PRDM1:2.41585762123;HBP1_HMGB_SSRP1_UBTF:2.39321985258;XBP1:2.35852768356;NFIX:2.34688668548;MTE{core}:2.26372455519;EGR1..3:2.21675411849;GATA4:2.10217041472;GTF2I:2.09856574673;SOX{8,9,10}:2.08486872794;TLX2:2.0727737061;NKX3-2:2.05856036151;ZBTB6:2.05414812139;ARID5B:2.04279531067;CUX2:2.00629891789;RREB1:1.99138708696;STAT1,3:1.97707826111;FOXM1:1.9385610099;MZF1:1.92174639773;MAFB:1.91294340604;TGIF1:1.84194594901;GFI1B:1.81985787135;SOX17:1.81482050516;PAX1,9:1.7501983892;CDC5L:1.68431977831;SMAD1..7,9:1.67209721476;NKX6-1,2:1.66688675466;POU6F1:1.62418216517;HMX1:1.62247972279;T:1.61286239261;RBPJ:1.60834948173;VSX1,2:1.58298693442;JUN:1.56773093931;HIC1:1.55421513715;KLF4:1.51997180557;TFAP2B:1.51157561913;LMO2:1.48465994799;MAZ:1.46521253879;STAT2,4,6:1.4348508566;HOX{A4,D4}:1.42795675921;PAX6:1.40984339022;LEF1_TCF7_TCF7L1,2:1.37700274147;NFIL3:1.36375477831;NRF1:1.3013157805;BREu{core}:1.29845190983;NKX2-3_NKX2-5:1.28459770638;PATZ1:1.25258998429;NANOG:1.20048251291;AR:1.19656126347;LHX3,4:1.1835632771;PBX1:1.14821962337;FOXN1:1.12878099055;FOXP3:1.12104474319;ADNP_IRX_SIX_ZHX:1.11845212421;PDX1:1.09645490845;ESRRA:1.0729039102;ZNF384:0.995655661422;EP300:0.984009224491;CREB1:0.976851626259;CRX:0.969078223756;ALX1:0.962118992268;RXR{A,B,G}_{NR1H2,PPAR}dimers:0.913600376753;ZBTB16:0.909929681921;MYBL2:0.841722475593;MYOD1:0.828804917512;SP1:0.805570188124;GTF2A1,2:0.791492256145;IKZF2:0.775867844713;POU5F1:0.761707591023;HMGA1,2:0.749857937371;RORA:0.740430458198;GFI1:0.711929263773;TFAP2{A,C}:0.682621677479;BPTF:0.676919842198;ZNF238:0.667563737779;SREBF1,2:0.652962612455;FOX{F1,F2,J1}:0.630354067355;ZIC1..3:0.600846710394;ZEB1:0.597710101956;TLX1..3_NFIC{dimer}:0.550788724768;ONECUT1,2:0.517580840772;PAX2:0.509607779693;ZNF143:0.481554825091;NR3C1:0.468033842153;PAX4:0.40852953243;ATF4:0.397693432819;MEF2{A,B,C,D}:0.360261900564;POU1F1:0.347900008616;FOXP1:0.341939850366;FOXD3:0.3348096632;TBX4,5:0.311054700239;HOX{A6,A7,B6,B7}:0.28753190486;IRF7:0.287291137539;SPZ1:0.280342761467;POU3F1..4:0.26138076428;ZNF423:0.227081347509;FOXO1,3,4:0.219226243509;EBF1:0.181290642794;TFDP1:0.17160014233;GZF1:0.151013532583;FOX{D1,D2}:0.135893147998;FOX{I1,J2}:0.0925931398258;ATF5_CREB3:0.0408119797529;HAND1,2:-0.0103099633523;CEBPA,B_DDIT3:-0.0121496299391;ATF6:-0.02018254328;NFY{A,B,C}:-0.081112118148;PAX8:-0.0882415673384;TOPORS:-0.174122486486;IKZF1:-0.200609890393;NFATC1..3:-0.223840157454;UFEwm:-0.246948939535;FOXL1:-0.26455489165;IRF1,2:-0.275446400215;YY1:-0.28816593255;NFE2:-0.312130879721;bHLH_family:-0.352725463098;CDX1,2,4:-0.356320971541;GCM1,2:-0.367033209541;GATA6:-0.372340430449;TBP:-0.433469718245;DMAP1_NCOR{1,2}_SMARC:-0.440342101283;NFE2L2:-0.452511363905;SPI1:-0.477148811656;SNAI1..3:-0.493593226703;NANOG{mouse}:-0.525867429756;EVI1:-0.543819703334;PITX1..3:-0.562678489617;NKX3-1:-0.573205893946;HIF1A:-0.579082420248;NFE2L1:-0.580204653657;TFCP2:-0.59511096662;HES1:-0.635653085552;FOXQ1:-0.63865938481;HSF1,2:-0.639235548326;NKX2-1,4:-0.680333240478;FOXA2:-0.709023713889;ETS1,2:-0.715529023948;RXR{A,B,G}:-0.724494034708;FOS_FOS{B,L1}_JUN{B,D}:-0.733169214003;SPIB:-0.749668631755;HNF4A_NR2F1,2:-0.752052366972;FOSL2:-0.766422043141;HNF1A:-0.796412312568;NR1H4:-0.804008693586;XCPE1{core}:-0.848433281932;TEAD1:-0.88584714327;BACH2:-0.88623690794;TEF:-0.893979780586;TFAP4:-0.977877628875;MYB:-1.02363376659;PAX3,7:-1.03462761219;HLF:-1.06249996415;NFKB1_REL_RELA:-1.07775858646;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.08362975682;ALX4:-1.10775040028;RUNX1..3:-1.14278977741;TP53:-1.15120858168;AIRE:-1.18387003726;NR5A1,2:-1.23770548734;SRF:-1.23823690694;POU2F1..3:-1.26899796409;GLI1..3:-1.2764514915;ELF1,2,4:-1.30000273852;E2F1..5:-1.32660155888;ELK1,4_GABP{A,B1}:-1.46644495259;NKX2-2,8:-1.55922637955;ESR1:-1.56351981799;ZNF148:-1.57103162009;RXRA_VDR{dimer}:-1.60695359306;TAL1_TCF{3,4,12}:-1.71304408974;NR6A1:-1.87818359804;STAT5{A,B}:-1.94996207013;HOX{A5,B5}:-2.05360367771;EN1,2:-2.53738039254;PPARG:-2.69280659749
 +
|xref=
 
}}
 
}}

Latest revision as of 10:08, 10 August 2017

Name:caudate nucleus - adult, donor10196
Species:Human (Homo sapiens)
Library ID:CNhs13802
Sample type:tissues
Genomic View: UCSC
MicroRNAs:Including candidate novel miRNAs(CAGE samples)
Excluding candidate novel miRNAs(CAGE samples)
RefEX:Specific genes
FANTOM CAT:1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:link
Additional information
Sample information
strainNA
tissuecaudate nucleus
dev stageNA
sexfemale
age60
cell typeCELL MIXTURE - tissue sample
cell lineNA
companyNA
collaborationPeter Heutink
External link for information[{{{sample_info_link}}} {{{sample_info_link}}}]
RNA information
lot numberNA
catalog numberNA
sample typetotal RNA
extraction protocol (Details)OP-RNA-extraction-totalRNA-miRNeasy_Mini-v1.0

Accession numbers
MethodSample accession id
CAGE  SAMD00005155
Library accession numbers

Library idMethodExp. accession idRun accession id
CNhs13802 CAGE DRX008629 DRR009501
Accession ID Hg19

Library idBAMCTSS
CNhs13802 DRZ000926 DRZ002311
Accession ID Hg38

Library idBAMCTSS
CNhs13802 DRZ012276 DRZ013661
Download raw sequence, BAM & CTSS
Hg19
FastaBAMCTSS
downloaddownloaddonwload
Hg38
BAMCTSS
downloaddonwload


Relative expression to median (log10)


Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.



Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data

Coexpression clusterscore
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural0.275
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis0.565
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma--0.321
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat0.857
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal0
C113-thyroid-throat-lung-lymph-small-colon-trachea0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula0.443
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD190
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils0
C120-immature-salivary-tongue-skin-cervical-CD14-CD340
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD40
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid0
C156-plasma-splenic-hereditary-B-large-xeroderma-b0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon0.275
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD40
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD190.175
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle0.668
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma0
C190-colon-small-rectum-duodenum-appendix-temporal-oral0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD40
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD140
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed--0.14
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall0
C202-salivary-skin-penis-tongue-uterus-cervical-immature0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD340
C205-mycosis-cord-hairy-xeroderma-CD4-B-b0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD340
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD340
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD190
C220-Adipocyte-mature-left-breast-skin-liver-adipose0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte--0.235
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD140
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF70
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus--0.798
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory0.0609
C247-pons-locus-medulla-spinal-paracentral-medial-occipital0.275
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast0.8
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD40.0347
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla0.857
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral0.275
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal0.275
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD80
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD40
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth0.238
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum0.657
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial0.275
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD40
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small--0.623
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus0.275
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial1.127
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD340
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte0
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala0.563
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic0
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory0.275
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula0.735
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD1330
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus0.443
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H90
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic0
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus0.275
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD80
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD340
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD340
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid0



Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Analyst:NA

link to dataset.
data



TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample


JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in this sample. Pearson's correlation between the number of TFBSs estimated by using the position-weight matrix for each promoter and its expression is expressed as Z-score by taking the ones based on random position-weight matrix, and the tail probability of the normal distribution corresponding to the Z-score is taken as the resulting P-value. Lower P-value indicates more (non-random) association of the motif to promoter expression
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13802

Jaspar motif P-value
MA0002.2 0.044
MA0003.1 0.322
MA0004.1 0.292
MA0006.1 0.244
MA0007.1 0.471
MA0009.1 0.495
MA0014.1 0.722
MA0017.1 0.0186
MA0018.2 0.0768
MA0019.1 0.799
MA0024.1 0.754
MA0025.1 0.313
MA0027.1 0.95
MA0028.1 0.0505
MA0029.1 0.0331
MA0030.1 0.689
MA0031.1 0.806
MA0035.2 0.0348
MA0038.1 0.0644
MA0039.2 0.143
MA0040.1 0.846
MA0041.1 0.181
MA0042.1 0.501
MA0043.1 0.497
MA0046.1 0.0193
MA0047.2 0.0866
MA0048.1 0.0777
MA0050.1 0.00794
MA0051.1 0.044
MA0052.1 0.467
MA0055.1 0.00101
MA0057.1 0.978
MA0058.1 0.235
MA0059.1 0.0884
MA0060.1 0.485
MA0061.1 0.00706
MA0062.2 7.56069e-4
MA0065.2 0.00309
MA0066.1 0.0819
MA0067.1 0.485
MA0068.1 0.95
MA0069.1 0.676
MA0070.1 0.346
MA0071.1 0.0123
MA0072.1 0.4
MA0073.1 0.397
MA0074.1 0.211
MA0076.1 0.102
MA0077.1 0.0975
MA0078.1 0.794
MA0079.2 0.77
MA0080.2 1.16233e-8
MA0081.1 0.0247
MA0083.1 0.137
MA0084.1 0.239
MA0087.1 0.229
MA0088.1 0.144
MA0090.1 0.285
MA0091.1 0.165
MA0092.1 0.365
MA0093.1 0.318
MA0099.2 3.06842e-14
MA0100.1 0.769
MA0101.1 0.00538
MA0102.2 0.306
MA0103.1 0.161
MA0104.2 0.485
MA0105.1 0.00226
MA0106.1 0.00993
MA0107.1 0.00624
MA0108.2 0.553
MA0111.1 0.573
MA0112.2 0.00212
MA0113.1 0.673
MA0114.1 0.00896
MA0115.1 0.926
MA0116.1 0.00817
MA0117.1 0.752
MA0119.1 0.0991
MA0122.1 0.546
MA0124.1 0.92
MA0125.1 0.127
MA0131.1 0.743
MA0135.1 0.0349
MA0136.1 9.31511e-12
MA0137.2 0.0138
MA0138.2 0.416
MA0139.1 0.45
MA0140.1 0.0156
MA0141.1 0.0127
MA0142.1 0.484
MA0143.1 0.155
MA0144.1 0.806
MA0145.1 0.176
MA0146.1 0.0055
MA0147.1 0.372
MA0148.1 0.0725
MA0149.1 0.0197
MA0150.1 5.78916e-4
MA0152.1 0.783
MA0153.1 0.605
MA0154.1 0.0477
MA0155.1 0.607
MA0156.1 2.30649e-8
MA0157.1 0.44
MA0159.1 0.0393
MA0160.1 0.0299
MA0162.1 0.137
MA0163.1 7.74292e-6
MA0164.1 0.687
MA0258.1 0.0315
MA0259.1 0.848



FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in 169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above
Analyst: Michiel de Hoon


link to dataset.
data

library id: CNhs13802

Novel motif P-value
1 0.0585
10 0.0364
100 0.235
101 0.409
102 0.927
103 0.0909
104 0.0488
105 0.111
106 0.031
107 0.125
108 0.9
109 0.00442
11 0.0107
110 0.0736
111 0.247
112 0.615
113 0.336
114 0.232
115 0.947
116 0.0773
117 0.0077
118 0.17
119 0.223
12 0.636
120 0.183
121 0.253
122 0.74
123 0.477
124 0.0745
125 0.524
126 0.0565
127 0.592
128 0.236
129 0.699
13 0.00148
130 0.428
131 0.0332
132 0.648
133 0.00311
134 0.751
135 0.0789
136 0.00201
137 0.899
138 0.841
139 0.399
14 0.763
140 0.558
141 0.607
142 0.601
143 0.0882
144 0.958
145 0.142
146 0.4
147 0.92
148 0.348
149 0.46
15 0.0727
150 0.137
151 0.548
152 0.0571
153 0.89
154 0.569
155 0.576
156 0.648
157 0.493
158 0.505
159 0.0762
16 0.0506
160 0.26
161 0.485
162 0.724
163 0.787
164 0.00818
165 0.221
166 0.785
167 0.636
168 0.345
169 0.00891
17 0.141
18 0.0956
19 0.188
2 0.878
20 0.0833
21 0.0531
22 0.157
23 0.604
24 0.0702
25 0.433
26 1.68759e-4
27 0.933
28 0.866
29 0.0121
3 0.0327
30 0.648
31 0.893
32 0.0081
33 0.0594
34 0.645
35 0.668
36 0.193
37 0.0253
38 0.364
39 0.387
4 0.83
40 0.0552
41 0.468
42 0.247
43 0.106
44 0.248
45 0.714
46 0.0535
47 0.0701
48 0.0437
49 0.18
5 0.621
50 0.259
51 0.457
52 0.592
53 0.953
54 0.397
55 0.555
56 0.486
57 0.221
58 0.373
59 0.0621
6 0.938
60 0.0667
61 0.123
62 0.279
63 0.173
64 0.151
65 0.278
66 0.131
67 0.339
68 0.18
69 0.419
7 0.0716
70 0.0303
71 0.0107
72 0.566
73 0.0243
74 0.463
75 0.0156
76 0.331
77 0.175
78 2.13406e-4
79 0.259
8 0.0699
80 0.932
81 0.516
82 0.592
83 0.0735
84 0.526
85 0.256
86 0.115
87 2.80306e-4
88 0.538
89 0.55
9 0.5
90 0.0967
91 0.526
92 0.557
93 0.628
94 0.161
95 0.0201
96 0.971
97 0.7
98 0.2
99 0.502



de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown.
Analyst:NA
library id: CNhs13802


FANTOM5 (FF) ontology


Direct parent terms


Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship
Analyst: Hideya Kawaji

link to source data
data

UBERON: Anatomy
0000468 (multi-cellular organism)
0007023 (adult organism)
0000955 (brain)
0001873 (caudate nucleus)
0000369 (corpus striatum)
0002435 (striatum)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0009663 (telencephalic nucleus)
0002420 (basal ganglion)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0000125 (neural nucleus)
0002020 (gray matter)
0007245 (nuclear complex of neuraxis)
0010317 (germ layer / neural crest derived structure)
0002308 (nucleus of brain)
0010009 (aggregate regional part of brain)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0005383 (caudate-putamen)
0010011 (collection of basal ganglia)
0000204 (ventral part of telencephalon)
0005382 (dorsal striatum)
0000454 (cerebral subcortex)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000101 (sample by species)
0000001 (sample)
0000998 (adult tissue sample)
0000004 (tissue sample)
0010164 (human caudate nucleus - adult donor sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship
Analyst: Hideya Kawaji

link to source data
data

UBERON:0002532 (epiblast (generic))
UBERON:0006601 (presumptive ectoderm)
UBERON:0010122 (future caudate nucleus)
UBERON:0010316 (germ layer / neural crest)