FF:11226-116C2: Difference between revisions
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{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet= | |DRA_sample_Accession=CAGE@SAMD00005373 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |DRA_sample_Accession_RNASeq=sRNA-Seq@SAMD00013686 | ||
|accession_numbers=CAGE;DRX008195;DRR009067;DRZ000492;DRZ001877;DRZ011842;DRZ013227 | |||
|accession_numbers_RNASeq=sRNA-Seq;DRX012363;DRR013811;DRZ003012 | |||
|ancestors_in_anatomy_facet= | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000988,CL:0000548,CL:0002371,CL:0000542,CL:0000219,CL:0000738,CL:0002087,CL:0002242,CL:0000255,CL:0000791,CL:0000084,CL:0000789,CL:0002419,CL:0000625 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000030 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 44: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor1.CNhs10854.11226-116C2.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor1.CNhs10854.11226-116C2.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor1.CNhs10854.11226-116C2.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor1.CNhs10854.11226-116C2.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/CD8%252b%2520T%2520Cells%252c%2520donor1.CNhs10854.11226-116C2.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11226-116C2 | |id=FF:11226-116C2 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000030;;FF:0000210 | ||
|is_obsolete= | |||
|library_id=CNhs10854!SRhi10010.TTAGGC | |||
|library_id_phase_based=2:CNhs10854 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11226 | |||
|microRNAs_nonnovel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer/#/human#srna;sample;SRhi10010.TTAGGC.11226 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11226 | |||
|microRNAs_novel_srna=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2016/vis_viewer_novel/#/human#srna;sample;SRhi10010.TTAGGC.11226 | |||
|name=CD8+ T Cells, donor1 | |name=CD8+ T Cells, donor1 | ||
|namespace=FANTOM5 | |namespace=FANTOM5 | ||
| Line 42: | Line 65: | ||
|profile_cagescan=,,, | |profile_cagescan=,,, | ||
|profile_hcage=CNhs10854,LSID702,release008,COMPLETED | |profile_hcage=CNhs10854,LSID702,release008,COMPLETED | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq=SRhi10010,,, | |profile_srnaseq=SRhi10010,,, | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0,0,0.0797623568580576,0.0451083601540771,0.382241736802171,0.142281835858454,-0.242522382147913,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.07356065349037,0,0,0,0,0,0.0491658538291903,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0.145305757189883,0,0,0,0,0,0,0,0,0.26695840809862,0,0,0,0.0797623568580576,0,0,0,0.108434028997858,0,0,0.159476782140664,0,0,0,0,0,0,0,0,0,0,1.99288941156331,0,0,0.256820409353761,0,0,0,0.141841660888439,0,0,0,0.0367818418714157,0,0,-0.0778895085438208,0,0,0,-0.0425986350337753,0.425333075629893,0.0398811784290288,0,0.208557567032272,0,0.567444453141754,-0.138477200800895,0,0,0,0,0,0.12841020467688,0,0,0,0,0,0,0,0,0,0,0,-0.096373593922461,0,0,0,0.0797623568580576,0.211292591731867,0.0797623568580576,0,0,0,0,0 | |||
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| |||
|rna_box=116 | |rna_box=116 | ||
|rna_catalog_number=3H100-26-10 | |rna_catalog_number=3H100-26-10 | ||
| Line 56: | Line 82: | ||
|rna_tube_id=116C2 | |rna_tube_id=116C2 | ||
|rna_weight_ug=10 | |rna_weight_ug=10 | ||
|rnaseq_library_id=SRhi10010.TTAGGC | |||
|sample_age=47 | |sample_age=47 | ||
|sample_category=primary cells | |||
|sample_cell_catalog=N/A | |sample_cell_catalog=N/A | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 97: | ||
|sample_ethnicity=C | |sample_ethnicity=C | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;7.02262949454009e-227!GO:0043227;membrane-bound organelle;9.5631056768923e-199!GO:0043231;intracellular membrane-bound organelle;2.37569573590121e-198!GO:0043226;organelle;3.53970508491131e-188!GO:0043229;intracellular organelle;1.75099034132227e-187!GO:0005737;cytoplasm;8.34326331498337e-124!GO:0005634;nucleus;1.8573232622332e-121!GO:0044422;organelle part;3.07027839872003e-109!GO:0044446;intracellular organelle part;1.48466239965703e-107!GO:0043170;macromolecule metabolic process;2.45654766718837e-105!GO:0044237;cellular metabolic process;2.08715564589864e-96!GO:0044238;primary metabolic process;1.96151445646285e-95!GO:0044428;nuclear part;6.69887044244023e-83!GO:0032991;macromolecular complex;1.32271764685302e-82!GO:0043283;biopolymer metabolic process;2.18882448009578e-82!GO:0003723;RNA binding;4.93660782903601e-80!GO:0044444;cytoplasmic part;2.90979306163476e-74!GO:0030529;ribonucleoprotein complex;6.2494200585205e-74!GO:0010467;gene expression;3.29771984358352e-68!GO:0043233;organelle lumen;1.03959008442309e-64!GO:0031974;membrane-enclosed lumen;1.03959008442309e-64!GO:0005515;protein binding;1.14660395256605e-63!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;1.21234784219803e-62!GO:0031981;nuclear lumen;2.31469952901954e-53!GO:0006396;RNA processing;9.85396682628526e-52!GO:0003676;nucleic acid binding;7.25415353023644e-50!GO:0033036;macromolecule localization;2.21570464878291e-47!GO:0019538;protein metabolic process;3.13687001101036e-47!GO:0044267;cellular protein metabolic process;6.7531754001052e-46!GO:0016071;mRNA metabolic process;2.60310945600758e-45!GO:0044260;cellular macromolecule metabolic process;4.9479363081754e-45!GO:0015031;protein transport;1.40241295537699e-44!GO:0045184;establishment of protein localization;2.81163234163862e-43!GO:0008104;protein localization;6.57517088459264e-43!GO:0006412;translation;1.00948634562184e-42!GO:0016070;RNA metabolic process;4.25653205739618e-42!GO:0043234;protein complex;2.03578278057447e-40!GO:0008380;RNA splicing;7.04548303618466e-39!GO:0006397;mRNA processing;2.29099017891378e-38!GO:0005840;ribosome;5.46572489185102e-37!GO:0005654;nucleoplasm;2.89575667656139e-34!GO:0031090;organelle membrane;4.14000090908408e-34!GO:0046907;intracellular transport;2.15476219733682e-33!GO:0016043;cellular component organization and biogenesis;2.28596163650528e-33!GO:0005739;mitochondrion;2.60583519249639e-33!GO:0003735;structural constituent of ribosome;1.56687637490555e-32!GO:0009059;macromolecule biosynthetic process;4.22064664627704e-32!GO:0006259;DNA metabolic process;7.70639084281536e-32!GO:0006886;intracellular protein transport;9.12162279434899e-31!GO:0000166;nucleotide binding;8.86800954240587e-30!GO:0031967;organelle envelope;1.43224473382409e-29!GO:0005681;spliceosome;1.54401940433396e-29!GO:0033279;ribosomal subunit;1.73777643900489e-29!GO:0031975;envelope;2.83953988378956e-29!GO:0005829;cytosol;3.16924475685195e-29!GO:0006512;ubiquitin cycle;7.21166782284207e-29!GO:0044451;nucleoplasm part;2.04670250542368e-28!GO:0005830;cytosolic ribosome (sensu Eukaryota);1.99356423106575e-27!GO:0022613;ribonucleoprotein complex biogenesis and assembly;2.94647858466561e-27!GO:0065003;macromolecular complex assembly;7.16401820196233e-27!GO:0044429;mitochondrial part;2.02850065906202e-25!GO:0043412;biopolymer modification;6.17341140703832e-25!GO:0006996;organelle organization and biogenesis;9.47943180890162e-25!GO:0022607;cellular component assembly;5.87862552203723e-24!GO:0051641;cellular localization;6.82264770999348e-24!GO:0051649;establishment of cellular localization;1.10652653431924e-23!GO:0044445;cytosolic part;1.31187394390946e-23!GO:0009058;biosynthetic process;6.13859650341464e-23!GO:0012501;programmed cell death;2.19473070857346e-22!GO:0044249;cellular biosynthetic process;3.47116951542759e-22!GO:0006915;apoptosis;3.60303144148003e-22!GO:0017111;nucleoside-triphosphatase activity;3.9701795892532e-22!GO:0006464;protein modification process;4.39019240876629e-22!GO:0016462;pyrophosphatase activity;1.70771213637339e-21!GO:0043687;post-translational protein modification;1.70771213637339e-21!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;2.04839449509048e-21!GO:0016817;hydrolase activity, acting on acid anhydrides;2.49261249547003e-21!GO:0008219;cell death;2.77818792064344e-21!GO:0016265;death;2.77818792064344e-21!GO:0032553;ribonucleotide binding;2.92406980193853e-21!GO:0032555;purine ribonucleotide binding;2.92406980193853e-21!GO:0050794;regulation of cellular process;3.59410293749473e-21!GO:0019941;modification-dependent protein catabolic process;4.8555503078028e-21!GO:0043632;modification-dependent macromolecule catabolic process;4.8555503078028e-21!GO:0051603;proteolysis involved in cellular protein catabolic process;5.81110338557305e-21!GO:0006511;ubiquitin-dependent protein catabolic process;6.27962849239118e-21!GO:0008134;transcription factor binding;9.58715082990644e-21!GO:0044257;cellular protein catabolic process;1.98190579606884e-20!GO:0017076;purine nucleotide binding;4.00870596405461e-20!GO:0005730;nucleolus;1.93413600255791e-19!GO:0044265;cellular macromolecule catabolic process;2.25926368190176e-19!GO:0016874;ligase activity;2.31149637622898e-19!GO:0006605;protein targeting;6.02745462173955e-19!GO:0016604;nuclear body;1.42392733346795e-18!GO:0043228;non-membrane-bound organelle;2.39231013115609e-18!GO:0043232;intracellular non-membrane-bound organelle;2.39231013115609e-18!GO:0022618;protein-RNA complex assembly;2.55868460189887e-18!GO:0006913;nucleocytoplasmic transport;2.81228208798159e-18!GO:0007049;cell cycle;2.94136744392813e-18!GO:0051169;nuclear transport;5.99820846006884e-18!GO:0005524;ATP binding;8.29840935149677e-18!GO:0019222;regulation of metabolic process;1.27075098618119e-17!GO:0032559;adenyl ribonucleotide binding;2.3865833136967e-17!GO:0043285;biopolymer catabolic process;3.1229507914908e-17!GO:0005740;mitochondrial envelope;6.58074207596269e-17!GO:0051276;chromosome organization and biogenesis;9.24195932684766e-17!GO:0006325;establishment and/or maintenance of chromatin architecture;1.55102168157461e-16!GO:0031966;mitochondrial membrane;1.82991865319721e-16!GO:0006974;response to DNA damage stimulus;2.37723693637664e-16!GO:0030554;adenyl nucleotide binding;4.68983899933332e-16!GO:0016607;nuclear speck;6.21299617283908e-16!GO:0006323;DNA packaging;8.77957889015783e-16!GO:0019866;organelle inner membrane;1.11471296389676e-15!GO:0008135;translation factor activity, nucleic acid binding;1.21490458559421e-15!GO:0015935;small ribosomal subunit;1.99454647312282e-15!GO:0031323;regulation of cellular metabolic process;2.99093866832956e-15!GO:0016887;ATPase activity;3.823559697614e-15!GO:0050789;regulation of biological process;5.44923403530731e-15!GO:0015934;large ribosomal subunit;5.52884404943959e-15!GO:0006350;transcription;6.57909454128584e-15!GO:0004386;helicase activity;8.34458510395215e-15!GO:0042981;regulation of apoptosis;1.04898258278514e-14!GO:0042623;ATPase activity, coupled;1.08590787840333e-14!GO:0043067;regulation of programmed cell death;1.37521699012528e-14!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.55498235593183e-14!GO:0030163;protein catabolic process;1.59755812393502e-14!GO:0006119;oxidative phosphorylation;2.24395722897574e-14!GO:0012505;endomembrane system;2.42165075275746e-14!GO:0009057;macromolecule catabolic process;2.56782497957011e-14!GO:0031965;nuclear membrane;8.04036018904449e-14!GO:0000398;nuclear mRNA splicing, via spliceosome;9.68272432819006e-14!GO:0000375;RNA splicing, via transesterification reactions;9.68272432819006e-14!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;9.68272432819006e-14!GO:0005635;nuclear envelope;1.10565327237819e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);1.40976774856551e-13!GO:0006281;DNA repair;1.92501791877068e-13!GO:0005743;mitochondrial inner membrane;2.19831850898778e-13!GO:0010468;regulation of gene expression;3.0074157914119e-13!GO:0008026;ATP-dependent helicase activity;4.83422004481253e-13!GO:0019219;regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;8.12048590902133e-13!GO:0022402;cell cycle process;8.48228533810793e-13!GO:0016568;chromatin modification;9.38191106341829e-13!GO:0017038;protein import;1.01753645001882e-12!GO:0006457;protein folding;1.23397275235975e-12!GO:0003712;transcription cofactor activity;1.49957316331766e-12!GO:0044453;nuclear membrane part;2.22982746139781e-12!GO:0006366;transcription from RNA polymerase II promoter;2.81998066234852e-12!GO:0032774;RNA biosynthetic process;3.38339996297367e-12!GO:0003743;translation initiation factor activity;3.44003336791984e-12!GO:0006351;transcription, DNA-dependent;3.81363833222444e-12!GO:0000502;proteasome complex (sensu Eukaryota);4.13432618785833e-12!GO:0044455;mitochondrial membrane part;7.84068330253228e-12!GO:0006413;translational initiation;1.05279140414932e-11!GO:0048770;pigment granule;1.57591179152683e-11!GO:0042470;melanosome;1.57591179152683e-11!GO:0006793;phosphorus metabolic process;1.71522917500335e-11!GO:0006796;phosphate metabolic process;1.71522917500335e-11!GO:0051726;regulation of cell cycle;1.72378237765621e-11!GO:0005694;chromosome;2.01930885368683e-11!GO:0050657;nucleic acid transport;2.13401911165252e-11!GO:0051236;establishment of RNA localization;2.13401911165252e-11!GO:0050658;RNA transport;2.13401911165252e-11!GO:0008639;small protein conjugating enzyme activity;2.21431993471303e-11!GO:0004842;ubiquitin-protein ligase activity;2.6522997848524e-11!GO:0006403;RNA localization;2.8576693343427e-11!GO:0045449;regulation of transcription;2.93084178435605e-11!GO:0000074;regulation of progression through cell cycle;3.72975819473248e-11!GO:0008270;zinc ion binding;3.73792363985126e-11!GO:0019787;small conjugating protein ligase activity;9.63295761798199e-11!GO:0005794;Golgi apparatus;9.79915445353403e-11!GO:0006446;regulation of translational initiation;1.03576358574224e-10!GO:0065004;protein-DNA complex assembly;1.1181253009565e-10!GO:0005643;nuclear pore;1.25393982909821e-10!GO:0048193;Golgi vesicle transport;1.45096695553118e-10!GO:0009719;response to endogenous stimulus;1.56388199706763e-10!GO:0044248;cellular catabolic process;1.69284870132881e-10!GO:0051170;nuclear import;2.07872218433799e-10!GO:0031980;mitochondrial lumen;2.09068516070543e-10!GO:0005759;mitochondrial matrix;2.09068516070543e-10!GO:0006606;protein import into nucleus;2.44758161999112e-10!GO:0006333;chromatin assembly or disassembly;2.63170982350657e-10!GO:0005746;mitochondrial respiratory chain;3.11333955082736e-10!GO:0042254;ribosome biogenesis and assembly;3.2470722823138e-10!GO:0007243;protein kinase cascade;4.45732543036557e-10!GO:0006355;regulation of transcription, DNA-dependent;4.62190883477242e-10!GO:0048523;negative regulation of cellular process;5.9523756266572e-10!GO:0065007;biological regulation;8.06739530478619e-10!GO:0016310;phosphorylation;9.06142286469554e-10!GO:0044427;chromosomal part;1.39275441906541e-09!GO:0051082;unfolded protein binding;1.4937173435822e-09!GO:0051028;mRNA transport;1.98007332273439e-09!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;3.19522787311366e-09!GO:0050136;NADH dehydrogenase (quinone) activity;4.45995259422233e-09!GO:0003954;NADH dehydrogenase activity;4.45995259422233e-09!GO:0008137;NADH dehydrogenase (ubiquinone) activity;4.45995259422233e-09!GO:0043566;structure-specific DNA binding;4.47129806786099e-09!GO:0016879;ligase activity, forming carbon-nitrogen bonds;4.51020195689478e-09!GO:0031324;negative regulation of cellular metabolic process;6.29514080250384e-09!GO:0005768;endosome;8.2316410630099e-09!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.48241628576975e-08!GO:0003677;DNA binding;1.48817392077401e-08!GO:0048519;negative regulation of biological process;1.49059607183267e-08!GO:0016881;acid-amino acid ligase activity;1.51672901140544e-08!GO:0016564;transcription repressor activity;1.85414951845948e-08!GO:0007249;I-kappaB kinase/NF-kappaB cascade;2.02236311535061e-08!GO:0046930;pore complex;2.10326392617474e-08!GO:0065009;regulation of a molecular function;2.2163200402618e-08!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;2.28904569572021e-08!GO:0016563;transcription activator activity;2.44168553697194e-08!GO:0003713;transcription coactivator activity;2.56046639158834e-08!GO:0016192;vesicle-mediated transport;3.38648645358584e-08!GO:0042775;organelle ATP synthesis coupled electron transport;3.59425872954352e-08!GO:0042773;ATP synthesis coupled electron transport;3.59425872954352e-08!GO:0065002;intracellular protein transport across a membrane;4.17015378487363e-08!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;4.35983601030049e-08!GO:0003697;single-stranded DNA binding;4.52787706382222e-08!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;4.71838952141179e-08!GO:0007242;intracellular signaling cascade;5.16382389784449e-08!GO:0000785;chromatin;7.32205179109009e-08!GO:0006917;induction of apoptosis;7.93395860590174e-08!GO:0032446;protein modification by small protein conjugation;8.53620214279875e-08!GO:0019829;cation-transporting ATPase activity;9.22286763219578e-08!GO:0043065;positive regulation of apoptosis;1.01912563236718e-07!GO:0016772;transferase activity, transferring phosphorus-containing groups;1.16152116617243e-07!GO:0030964;NADH dehydrogenase complex (quinone);1.16152116617243e-07!GO:0045271;respiratory chain complex I;1.16152116617243e-07!GO:0005747;mitochondrial respiratory chain complex I;1.16152116617243e-07!GO:0045786;negative regulation of progression through cell cycle;1.21244620513327e-07!GO:0012502;induction of programmed cell death;1.32612202966136e-07!GO:0016481;negative regulation of transcription;1.4515302442962e-07!GO:0009892;negative regulation of metabolic process;1.49326115788629e-07!GO:0043068;positive regulation of programmed cell death;1.53662295932081e-07!GO:0016740;transferase activity;1.6678562923702e-07!GO:0016567;protein ubiquitination;1.76363215810992e-07!GO:0046914;transition metal ion binding;1.83657087397972e-07!GO:0016072;rRNA metabolic process;1.85335947066082e-07!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;1.94432753769251e-07!GO:0044432;endoplasmic reticulum part;2.13645647796759e-07!GO:0006364;rRNA processing;2.60573644669012e-07!GO:0016787;hydrolase activity;3.3388107413624e-07!GO:0004674;protein serine/threonine kinase activity;3.76880561341059e-07!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;3.77047744098696e-07!GO:0008565;protein transporter activity;3.7879915507822e-07!GO:0051168;nuclear export;3.83407772331103e-07!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.94724668329568e-07!GO:0019899;enzyme binding;4.41352303288357e-07!GO:0006399;tRNA metabolic process;4.45551485321208e-07!GO:0003724;RNA helicase activity;5.48898573873027e-07!GO:0051246;regulation of protein metabolic process;6.59372883825265e-07!GO:0000278;mitotic cell cycle;7.00526604717494e-07!GO:0000151;ubiquitin ligase complex;7.10966804037448e-07!GO:0030532;small nuclear ribonucleoprotein complex;1.05219486156969e-06!GO:0043069;negative regulation of programmed cell death;1.54091760297559e-06!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;1.70061722748879e-06!GO:0006888;ER to Golgi vesicle-mediated transport;1.74522068191798e-06!GO:0006260;DNA replication;1.75030046024536e-06!GO:0042175;nuclear envelope-endoplasmic reticulum network;1.89723178157129e-06!GO:0005783;endoplasmic reticulum;1.96477780199948e-06!GO:0031202;RNA splicing factor activity, transesterification mechanism;1.99104826950585e-06!GO:0006357;regulation of transcription from RNA polymerase II promoter;2.31172220857794e-06!GO:0006916;anti-apoptosis;2.36135259870149e-06!GO:0005761;mitochondrial ribosome;2.43227273360777e-06!GO:0000313;organellar ribosome;2.43227273360777e-06!GO:0031497;chromatin assembly;2.43600890741318e-06!GO:0043066;negative regulation of apoptosis;2.63087759820175e-06!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;2.70963205842858e-06!GO:0005789;endoplasmic reticulum membrane;3.24647055960012e-06!GO:0003924;GTPase activity;3.25330351826543e-06!GO:0006334;nucleosome assembly;4.22783909120952e-06!GO:0009259;ribonucleotide metabolic process;4.2656818785151e-06!GO:0051186;cofactor metabolic process;4.85941244669349e-06!GO:0009260;ribonucleotide biosynthetic process;5.11741594549644e-06!GO:0000245;spliceosome assembly;5.63822754144523e-06!GO:0009060;aerobic respiration;6.30159368267164e-06!GO:0005839;proteasome core complex (sensu Eukaryota);6.57273282182847e-06!GO:0015986;ATP synthesis coupled proton transport;8.27579765240435e-06!GO:0015985;energy coupled proton transport, down electrochemical gradient;8.27579765240435e-06!GO:0016363;nuclear matrix;1.00824705712543e-05!GO:0005813;centrosome;1.16338333837463e-05!GO:0005525;GTP binding;1.19335498801836e-05!GO:0006164;purine nucleotide biosynthetic process;1.23632656965545e-05!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;1.30101927039955e-05!GO:0015399;primary active transmembrane transporter activity;1.30101927039955e-05!GO:0008186;RNA-dependent ATPase activity;1.30195427253959e-05!GO:0016779;nucleotidyltransferase activity;1.34756731135741e-05!GO:0009152;purine ribonucleotide biosynthetic process;1.42098892486895e-05!GO:0004298;threonine endopeptidase activity;1.63779087025342e-05!GO:0006402;mRNA catabolic process;1.71998563866933e-05!GO:0005793;ER-Golgi intermediate compartment;1.75014947664007e-05!GO:0008234;cysteine-type peptidase activity;2.07690273927707e-05!GO:0006163;purine nucleotide metabolic process;2.09756511801339e-05!GO:0008632;apoptotic program;2.12897635961375e-05!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;2.12897635961375e-05!GO:0004812;aminoacyl-tRNA ligase activity;2.12897635961375e-05!GO:0016875;ligase activity, forming carbon-oxygen bonds;2.12897635961375e-05!GO:0006401;RNA catabolic process;2.2058962022952e-05!GO:0015078;hydrogen ion transmembrane transporter activity;2.38334938378885e-05!GO:0044440;endosomal part;2.53944395360128e-05!GO:0010008;endosome membrane;2.53944395360128e-05!GO:0006732;coenzyme metabolic process;2.54067837618765e-05!GO:0006613;cotranslational protein targeting to membrane;2.5618516247866e-05!GO:0009150;purine ribonucleotide metabolic process;2.5667186967387e-05!GO:0050790;regulation of catalytic activity;3.11648055417287e-05!GO:0060090;molecular adaptor activity;3.24834390267752e-05!GO:0003714;transcription corepressor activity;3.91773333672704e-05!GO:0044431;Golgi apparatus part;4.09170189431218e-05!GO:0004004;ATP-dependent RNA helicase activity;4.12166141696655e-05!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;4.34176466346815e-05!GO:0043038;amino acid activation;4.80110499506223e-05!GO:0006418;tRNA aminoacylation for protein translation;4.80110499506223e-05!GO:0043039;tRNA aminoacylation;4.80110499506223e-05!GO:0006754;ATP biosynthetic process;4.80110499506223e-05!GO:0006753;nucleoside phosphate metabolic process;4.80110499506223e-05!GO:0005815;microtubule organizing center;4.82198497937433e-05!GO:0006352;transcription initiation;4.87223395795294e-05!GO:0009142;nucleoside triphosphate biosynthetic process;4.92499181208608e-05!GO:0009201;ribonucleoside triphosphate biosynthetic process;4.92499181208608e-05!GO:0045333;cellular respiration;5.12887289598555e-05!GO:0007005;mitochondrion organization and biogenesis;5.64174813242408e-05!GO:0030120;vesicle coat;5.64174813242408e-05!GO:0030662;coated vesicle membrane;5.64174813242408e-05!GO:0022403;cell cycle phase;5.84579998911287e-05!GO:0009056;catabolic process;6.23983908401843e-05!GO:0007264;small GTPase mediated signal transduction;6.23983908401843e-05!GO:0006461;protein complex assembly;6.52313193840415e-05!GO:0009615;response to virus;7.40404472074604e-05!GO:0016251;general RNA polymerase II transcription factor activity;7.60885715308081e-05!GO:0045259;proton-transporting ATP synthase complex;7.66048396992511e-05!GO:0016469;proton-transporting two-sector ATPase complex;7.86916415382831e-05!GO:0019783;small conjugating protein-specific protease activity;8.28443053818604e-05!GO:0005770;late endosome;8.45067797726965e-05!GO:0015630;microtubule cytoskeleton;9.41748847304023e-05!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;0.000100576399273373!GO:0009145;purine nucleoside triphosphate biosynthetic process;0.000100576399273373!GO:0003729;mRNA binding;0.00010217259465902!GO:0003690;double-stranded DNA binding;0.000103930189813888!GO:0048475;coated membrane;0.000106771840179699!GO:0030117;membrane coat;0.000106771840179699!GO:0005667;transcription factor complex;0.00010789337492509!GO:0048522;positive regulation of cellular process;0.000112054637508811!GO:0043492;ATPase activity, coupled to movement of substances;0.000112163379927931!GO:0051427;hormone receptor binding;0.000117053701763882!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.000123610785659514!GO:0009199;ribonucleoside triphosphate metabolic process;0.000126500016573345!GO:0004843;ubiquitin-specific protease activity;0.000129351799625821!GO:0016197;endosome transport;0.000132719170557689!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.000149912810134675!GO:0030695;GTPase regulator activity;0.000151987320858274!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.000152391777265583!GO:0009141;nucleoside triphosphate metabolic process;0.000155076682122605!GO:0006310;DNA recombination;0.000156351928109577!GO:0045892;negative regulation of transcription, DNA-dependent;0.00016560657619891!GO:0007265;Ras protein signal transduction;0.000167818511456664!GO:0032561;guanyl ribonucleotide binding;0.000173674002424073!GO:0019001;guanyl nucleotide binding;0.000173674002424073!GO:0046034;ATP metabolic process;0.000182036927409202!GO:0006612;protein targeting to membrane;0.000182715471671703!GO:0005769;early endosome;0.00018814420358305!GO:0051301;cell division;0.000211758922087664!GO:0035257;nuclear hormone receptor binding;0.000212579540700571!GO:0015631;tubulin binding;0.000218356546020399!GO:0043623;cellular protein complex assembly;0.000230723628671089!GO:0009205;purine ribonucleoside triphosphate metabolic process;0.000238237035699742!GO:0009144;purine nucleoside triphosphate metabolic process;0.000238237035699742!GO:0051188;cofactor biosynthetic process;0.000290421370746172!GO:0004221;ubiquitin thiolesterase activity;0.000296667689274619!GO:0006417;regulation of translation;0.000324243994037951!GO:0006099;tricarboxylic acid cycle;0.000324243994037951!GO:0046356;acetyl-CoA catabolic process;0.000324243994037951!GO:0030384;phosphoinositide metabolic process;0.000393741763638493!GO:0000087;M phase of mitotic cell cycle;0.00041968449728132!GO:0006607;NLS-bearing substrate import into nucleus;0.000437484056804846!GO:0006611;protein export from nucleus;0.000493932650412481!GO:0008047;enzyme activator activity;0.000534815984923003!GO:0048471;perinuclear region of cytoplasm;0.000552568781819475!GO:0007067;mitosis;0.000605936613667663!GO:0009966;regulation of signal transduction;0.000625028765189798!GO:0008654;phospholipid biosynthetic process;0.000631039206152485!GO:0005885;Arp2/3 protein complex;0.000651539943952223!GO:0005070;SH3/SH2 adaptor activity;0.000666418196327782!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.00069909660245786!GO:0006084;acetyl-CoA metabolic process;0.000699338881785585!GO:0009108;coenzyme biosynthetic process;0.000724442704935795!GO:0005083;small GTPase regulator activity;0.000778394583767496!GO:0046966;thyroid hormone receptor binding;0.000794127849904393!GO:0046649;lymphocyte activation;0.000817699075708687!GO:0006405;RNA export from nucleus;0.000831635817927292!GO:0006891;intra-Golgi vesicle-mediated transport;0.00084857358326071!GO:0001772;immunological synapse;0.000862689575585467!GO:0051789;response to protein stimulus;0.000862689575585467!GO:0006986;response to unfolded protein;0.000862689575585467!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.000886111132768137!GO:0031326;regulation of cellular biosynthetic process;0.000889502828875398!GO:0009055;electron carrier activity;0.000899959083400218!GO:0000139;Golgi membrane;0.000899959083400218!GO:0005773;vacuole;0.000911930030317238!GO:0042110;T cell activation;0.00095885989429073!GO:0016301;kinase activity;0.000962532592648373!GO:0048468;cell development;0.00102387234014259!GO:0006261;DNA-dependent DNA replication;0.00103528460945036!GO:0005798;Golgi-associated vesicle;0.00108779641848077!GO:0006752;group transfer coenzyme metabolic process;0.00115025141320686!GO:0008017;microtubule binding;0.00120054645032654!GO:0007050;cell cycle arrest;0.00120054645032654!GO:0016773;phosphotransferase activity, alcohol group as acceptor;0.00124375469298329!GO:0031072;heat shock protein binding;0.00125532973665639!GO:0003899;DNA-directed RNA polymerase activity;0.00129801771463759!GO:0022415;viral reproductive process;0.00145187579031791!GO:0003678;DNA helicase activity;0.00151564412494326!GO:0006650;glycerophospholipid metabolic process;0.00159762003347731!GO:0043021;ribonucleoprotein binding;0.00160760634234185!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.001667643866452!GO:0009109;coenzyme catabolic process;0.00173405649948!GO:0031252;leading edge;0.00174706850889936!GO:0006383;transcription from RNA polymerase III promoter;0.00183091547904429!GO:0005852;eukaryotic translation initiation factor 3 complex;0.00186057736235627!GO:0046489;phosphoinositide biosynthetic process;0.00196420019226663!GO:0051252;regulation of RNA metabolic process;0.0021224369264749!GO:0048518;positive regulation of biological process;0.00219522954860459!GO:0008022;protein C-terminus binding;0.00225326940648861!GO:0019843;rRNA binding;0.00226613294575926!GO:0009889;regulation of biosynthetic process;0.00229542497521964!GO:0005637;nuclear inner membrane;0.00229542497521964!GO:0016790;thiolester hydrolase activity;0.00230231586896648!GO:0009967;positive regulation of signal transduction;0.0023339479331023!GO:0033673;negative regulation of kinase activity;0.0023339479331023!GO:0006469;negative regulation of protein kinase activity;0.0023339479331023!GO:0031625;ubiquitin protein ligase binding;0.00234643573415457!GO:0006367;transcription initiation from RNA polymerase II promoter;0.00236835279088658!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00241313271429648!GO:0000184;mRNA catabolic process, nonsense-mediated decay;0.00257276699797856!GO:0044452;nucleolar part;0.00260996215374636!GO:0006414;translational elongation;0.0026337844454007!GO:0007034;vacuolar transport;0.00275850936025073!GO:0005096;GTPase activator activity;0.00285297300373371!GO:0005669;transcription factor TFIID complex;0.0029460649010779!GO:0051329;interphase of mitotic cell cycle;0.00307668454430479!GO:0000279;M phase;0.00307701684701849!GO:0005774;vacuolar membrane;0.00317996902761907!GO:0017091;AU-rich element binding;0.00319822894164541!GO:0050779;RNA destabilization;0.00319822894164541!GO:0000289;poly(A) tail shortening;0.00319822894164541!GO:0030658;transport vesicle membrane;0.0032030842176866!GO:0045941;positive regulation of transcription;0.00320691487092057!GO:0046822;regulation of nucleocytoplasmic transport;0.00327731853042181!GO:0019867;outer membrane;0.00332032455919634!GO:0003682;chromatin binding;0.00341950227172321!GO:0051223;regulation of protein transport;0.0035352907773663!GO:0016584;nucleosome positioning;0.00354910906733759!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;0.00366361232524935!GO:0051348;negative regulation of transferase activity;0.00367439712485465!GO:0016311;dephosphorylation;0.00370036086234499!GO:0003725;double-stranded RNA binding;0.00384471781448658!GO:0051090;regulation of transcription factor activity;0.00387587082336944!GO:0000122;negative regulation of transcription from RNA polymerase II promoter;0.00387800792706222!GO:0000323;lytic vacuole;0.0039787920896453!GO:0005764;lysosome;0.0039787920896453!GO:0006468;protein amino acid phosphorylation;0.00402263452933334!GO:0030518;steroid hormone receptor signaling pathway;0.00403182866066527!GO:0031968;organelle outer membrane;0.00405664316130687!GO:0030258;lipid modification;0.00420244524812606!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.00424993847161758!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00431151755724457!GO:0006338;chromatin remodeling;0.00440357956494769!GO:0046474;glycerophospholipid biosynthetic process;0.00440911031872833!GO:0043488;regulation of mRNA stability;0.00455371836033274!GO:0043487;regulation of RNA stability;0.00455371836033274!GO:0005048;signal sequence binding;0.00460433065007038!GO:0051336;regulation of hydrolase activity;0.00465110138613724!GO:0008287;protein serine/threonine phosphatase complex;0.00467071784039153!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.00467071784039153!GO:0042101;T cell receptor complex;0.00470058256251076!GO:0005741;mitochondrial outer membrane;0.00474627856352804!GO:0008139;nuclear localization sequence binding;0.00477908439495425!GO:0042802;identical protein binding;0.00480574360077286!GO:0051325;interphase;0.00486153826277083!GO:0051251;positive regulation of lymphocyte activation;0.00500086055452755!GO:0048500;signal recognition particle;0.00513100372400288!GO:0003711;transcription elongation regulator activity;0.00550081959169893!GO:0008033;tRNA processing;0.00568693939214899!GO:0031902;late endosome membrane;0.0057132537716688!GO:0005765;lysosomal membrane;0.00597275674671461!GO:0051187;cofactor catabolic process;0.00597971466627456!GO:0005819;spindle;0.0061176035919347!GO:0006302;double-strand break repair;0.0061176035919347!GO:0032200;telomere organization and biogenesis;0.00622714675176554!GO:0000723;telomere maintenance;0.00622714675176554!GO:0006818;hydrogen transport;0.00622714675176554!GO:0045893;positive regulation of transcription, DNA-dependent;0.00642111815982645!GO:0015992;proton transport;0.00654524744776987!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00657101701237317!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00657101701237317!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00657101701237317!GO:0005684;U2-dependent spliceosome;0.00676531470178514!GO:0002474;antigen processing and presentation of peptide antigen via MHC class I;0.00693065926012079!GO:0051338;regulation of transferase activity;0.00697562372337652!GO:0000049;tRNA binding;0.00708868862905546!GO:0044437;vacuolar part;0.00709901743802116!GO:0000786;nucleosome;0.00716371725517764!GO:0051092;activation of NF-kappaB transcription factor;0.00727490386423906!GO:0004428;inositol or phosphatidylinositol kinase activity;0.00732131136873986!GO:0000118;histone deacetylase complex;0.00756630546836369!GO:0006984;ER-nuclear signaling pathway;0.00774096061116924!GO:0043549;regulation of kinase activity;0.00775053476894004!GO:0030660;Golgi-associated vesicle membrane;0.00787652604110923!GO:0000119;mediator complex;0.00801381284966293!GO:0008168;methyltransferase activity;0.00823251495982683!GO:0003684;damaged DNA binding;0.00837763219499646!GO:0004437;inositol or phosphatidylinositol phosphatase activity;0.00840005709840628!GO:0030521;androgen receptor signaling pathway;0.00841429035024669!GO:0016741;transferase activity, transferring one-carbon groups;0.00845034214600414!GO:0030127;COPII vesicle coat;0.00855996571961007!GO:0012507;ER to Golgi transport vesicle membrane;0.00855996571961007!GO:0030968;unfolded protein response;0.00855996571961007!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00869203076163934!GO:0045047;protein targeting to ER;0.00869203076163934!GO:0043414;biopolymer methylation;0.00882204151547651!GO:0003746;translation elongation factor activity;0.00887202229038258!GO:0000209;protein polyubiquitination;0.00900901771593632!GO:0008312;7S RNA binding;0.00924539205064416!GO:0006376;mRNA splice site selection;0.00926388885657223!GO:0000389;nuclear mRNA 3'-splice site recognition;0.00926388885657223!GO:0045603;positive regulation of endothelial cell differentiation;0.00930993679973001!GO:0030522;intracellular receptor-mediated signaling pathway;0.0101665570307992!GO:0051098;regulation of binding;0.0101665570307992!GO:0003950;NAD+ ADP-ribosyltransferase activity;0.0101665570307992!GO:0004527;exonuclease activity;0.010264652981338!GO:0040029;regulation of gene expression, epigenetic;0.0103545440999617!GO:0016791;phosphoric monoester hydrolase activity;0.0105177439048494!GO:0032259;methylation;0.0106213039723472!GO:0031982;vesicle;0.0107652154501918!GO:0046854;phosphoinositide phosphorylation;0.0109806032272928!GO:0008637;apoptotic mitochondrial changes;0.0110012902614987!GO:0051052;regulation of DNA metabolic process;0.0111194437903428!GO:0051235;maintenance of localization;0.0112796824110493!GO:0046983;protein dimerization activity;0.0113114120087525!GO:0000082;G1/S transition of mitotic cell cycle;0.0113590018766293!GO:0006919;caspase activation;0.0118232786732695!GO:0019901;protein kinase binding;0.0119084631533369!GO:0019904;protein domain specific binding;0.0119099346213862!GO:0000781;chromosome, telomeric region;0.0119419374121438!GO:0048487;beta-tubulin binding;0.0125721399800562!GO:0030880;RNA polymerase complex;0.0130674419246619!GO:0016585;chromatin remodeling complex;0.0137028155987488!GO:0030134;ER to Golgi transport vesicle;0.0137433846632167!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.0137650128864256!GO:0004722;protein serine/threonine phosphatase activity;0.0138432412726094!GO:0043087;regulation of GTPase activity;0.0139081252304682!GO:0005762;mitochondrial large ribosomal subunit;0.0139081252304682!GO:0000315;organellar large ribosomal subunit;0.0139081252304682!GO:0045859;regulation of protein kinase activity;0.0139355117134348!GO:0046467;membrane lipid biosynthetic process;0.0140142947978896!GO:0032940;secretion by cell;0.014285812972708!GO:0000059;protein import into nucleus, docking;0.0146471482340972!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;0.0149972994932772!GO:0047485;protein N-terminus binding;0.0150359027662545!GO:0043681;protein import into mitochondrion;0.0150621628791222!GO:0007041;lysosomal transport;0.0152699524652177!GO:0015923;mannosidase activity;0.0153861322879908!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.016069404247223!GO:0043407;negative regulation of MAP kinase activity;0.016362840183586!GO:0033116;ER-Golgi intermediate compartment membrane;0.0163673805655203!GO:0005657;replication fork;0.0165933036685931!GO:0043281;regulation of caspase activity;0.0166999059597686!GO:0050811;GABA receptor binding;0.0167411439776226!GO:0007004;telomere maintenance via telomerase;0.0167411439776226!GO:0032508;DNA duplex unwinding;0.0167411439776226!GO:0032392;DNA geometric change;0.0167411439776226!GO:0051059;NF-kappaB binding;0.0167610077816176!GO:0046834;lipid phosphorylation;0.016802936260975!GO:0006470;protein amino acid dephosphorylation;0.0169866161396721!GO:0016763;transferase activity, transferring pentosyl groups;0.0170223149833886!GO:0051539;4 iron, 4 sulfur cluster binding;0.0170223149833886!GO:0016605;PML body;0.0172781403554602!GO:0006497;protein amino acid lipidation;0.0174136255914846!GO:0030374;ligand-dependent nuclear receptor transcription coactivator activity;0.0174377623557184!GO:0008276;protein methyltransferase activity;0.0175112839810829!GO:0043022;ribosome binding;0.0175254636581736!GO:0001667;ameboidal cell migration;0.0179082117638917!GO:0032027;myosin light chain binding;0.0179082117638917!GO:0043280;positive regulation of caspase activity;0.0182044205919823!GO:0004721;phosphoprotein phosphatase activity;0.0183270689235346!GO:0000060;protein import into nucleus, translocation;0.0184988370454275!GO:0045321;leukocyte activation;0.0192561538896903!GO:0004177;aminopeptidase activity;0.0193059938582096!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0198995448641601!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0201578532180994!GO:0000428;DNA-directed RNA polymerase complex;0.0201578532180994!GO:0016859;cis-trans isomerase activity;0.0207309066101226!GO:0016569;covalent chromatin modification;0.0209070752769467!GO:0006406;mRNA export from nucleus;0.0220195979448881!GO:0003702;RNA polymerase II transcription factor activity;0.0229426274169083!GO:0009117;nucleotide metabolic process;0.02346574307326!GO:0015980;energy derivation by oxidation of organic compounds;0.023545744875875!GO:0031461;cullin-RING ubiquitin ligase complex;0.0235558905934554!GO:0004402;histone acetyltransferase activity;0.0237343466215279!GO:0004468;lysine N-acetyltransferase activity;0.0237343466215279!GO:0030433;ER-associated protein catabolic process;0.0237690333343946!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0237690333343946!GO:0019058;viral infectious cycle;0.0249427399700795!GO:0008097;5S rRNA binding;0.0252088653529506!GO:0005869;dynactin complex;0.0252822042181503!GO:0016570;histone modification;0.0253275172785669!GO:0006661;phosphatidylinositol biosynthetic process;0.0255656463811561!GO:0031410;cytoplasmic vesicle;0.0261097746290258!GO:0005521;lamin binding;0.0261462932600332!GO:0006289;nucleotide-excision repair;0.0264148294128403!GO:0031988;membrane-bound vesicle;0.0264922836547498!GO:0006354;RNA elongation;0.0269938086258922!GO:0033549;MAP kinase phosphatase activity;0.0270029783853576!GO:0017017;MAP kinase tyrosine/serine/threonine phosphatase activity;0.0270029783853576!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0274662232346156!GO:0030145;manganese ion binding;0.0278992412428864!GO:0050852;T cell receptor signaling pathway;0.0278992412428864!GO:0000287;magnesium ion binding;0.0280130734655707!GO:0045185;maintenance of protein localization;0.0281108947888893!GO:0007006;mitochondrial membrane organization and biogenesis;0.0282027188260334!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0285662751995073!GO:0009893;positive regulation of metabolic process;0.0285662751995073!GO:0051087;chaperone binding;0.0286407962900971!GO:0019900;kinase binding;0.0287605536821285!GO:0019210;kinase inhibitor activity;0.0290692796114527!GO:0022406;membrane docking;0.0294712986573436!GO:0048278;vesicle docking;0.0294712986573436!GO:0031901;early endosome membrane;0.0294712986573436!GO:0033157;regulation of intracellular protein transport;0.0300591580879424!GO:0042306;regulation of protein import into nucleus;0.0300591580879424!GO:0008536;Ran GTPase binding;0.0305831209018935!GO:0006839;mitochondrial transport;0.0307889316906457!GO:0046979;TAP2 binding;0.0307889316906457!GO:0046977;TAP binding;0.0307889316906457!GO:0046978;TAP1 binding;0.0307889316906457!GO:0016455;RNA polymerase II transcription mediator activity;0.031510764184828!GO:0042608;T cell receptor binding;0.0315798045136035!GO:0016279;protein-lysine N-methyltransferase activity;0.0318958845255679!GO:0018024;histone-lysine N-methyltransferase activity;0.0318958845255679!GO:0016278;lysine N-methyltransferase activity;0.0318958845255679!GO:0004672;protein kinase activity;0.0322254406076729!GO:0035026;leading edge cell differentiation;0.0323767846163046!GO:0043621;protein self-association;0.0324408016887803!GO:0000314;organellar small ribosomal subunit;0.0326008159584242!GO:0005763;mitochondrial small ribosomal subunit;0.0326008159584242!GO:0006904;vesicle docking during exocytosis;0.0326567503363477!GO:0008624;induction of apoptosis by extracellular signals;0.0329388498277892!GO:0005665;DNA-directed RNA polymerase II, core complex;0.0330435843501715!GO:0045045;secretory pathway;0.0331784056064379!GO:0042771;DNA damage response, signal transduction by p53 class mediator resulting in induction of apoptosis;0.0341470148309519!GO:0004003;ATP-dependent DNA helicase activity;0.0341624207397684!GO:0045454;cell redox homeostasis;0.0347220132603128!GO:0045736;negative regulation of cyclin-dependent protein kinase activity;0.0354078338845408!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.0354661716655339!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.0354661716655339!GO:0051091;positive regulation of transcription factor activity;0.0363235751362356!GO:0006626;protein targeting to mitochondrion;0.0367979366831279!GO:0031647;regulation of protein stability;0.0369788222285923!GO:0046426;negative regulation of JAK-STAT cascade;0.0369916604256!GO:0031124;mRNA 3'-end processing;0.0371183532062689!GO:0004860;protein kinase inhibitor activity;0.0375474620846012!GO:0044438;microbody part;0.0380766017695261!GO:0044439;peroxisomal part;0.0380766017695261!GO:0030118;clathrin coat;0.0381513151762147!GO:0016272;prefoldin complex;0.0388397611240748!GO:0008601;protein phosphatase type 2A regulator activity;0.039052608970781!GO:0030867;rough endoplasmic reticulum membrane;0.0390817436657419!GO:0022890;inorganic cation transmembrane transporter activity;0.0392830905329616!GO:0022411;cellular component disassembly;0.0396500034062428!GO:0006595;polyamine metabolic process;0.0399939603056274!GO:0035035;histone acetyltransferase binding;0.0408252300126724!GO:0042809;vitamin D receptor binding;0.0408568601068818!GO:0030833;regulation of actin filament polymerization;0.0412965636131659!GO:0004197;cysteine-type endopeptidase activity;0.0414754110173425!GO:0006914;autophagy;0.0416559713768882!GO:0000776;kinetochore;0.0419072483514191!GO:0018193;peptidyl-amino acid modification;0.0421558711384646!GO:0004518;nuclease activity;0.0422691613685086!GO:0032507;maintenance of cellular protein localization;0.0425031169153946!GO:0016853;isomerase activity;0.0425031169153946!GO:0002763;positive regulation of myeloid leukocyte differentiation;0.0429060684225279!GO:0006506;GPI anchor biosynthetic process;0.0429464605250196!GO:0042287;MHC protein binding;0.0430203341139555!GO:0000188;inactivation of MAPK activity;0.0439009587052798!GO:0019079;viral genome replication;0.0449890417182581!GO:0016788;hydrolase activity, acting on ester bonds;0.0450644092152691!GO:0000738;DNA catabolic process, exonucleolytic;0.0452117654579471!GO:0005874;microtubule;0.0453781022684499!GO:0042158;lipoprotein biosynthetic process;0.0455093417180853!GO:0051457;maintenance of protein localization in nucleus;0.0467348243502036!GO:0006926;virus-infected cell apoptosis;0.0467666640439188!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0471868537332387!GO:0032318;regulation of Ras GTPase activity;0.0477084269844248!GO:0000288;mRNA catabolic process, deadenylation-dependent decay;0.0477414432950154!GO:0006505;GPI anchor metabolic process;0.0484443616192156!GO:0000303;response to superoxide;0.0484443616192156!GO:0031098;stress-activated protein kinase signaling pathway;0.0487917689949586 | |||
|sample_id=11226 | |sample_id=11226 | ||
|sample_note= | |sample_note= | ||
| Line 76: | Line 105: | ||
|sample_tissue=blood | |sample_tissue=blood | ||
|top_motifs=RORA:4.40643880323;PAX3,7:4.10006642284;CREB1:3.59266383175;ATF4:3.49165621849;ATF5_CREB3:3.31829025795;RFX2..5_RFXANK_RFXAP:3.26207926989;RUNX1..3:3.2343750784;FOXO1,3,4:3.04924425332;FOX{D1,D2}:2.92538871625;FOXN1:2.85675310843;ELF1,2,4:2.64904710519;FOX{F1,F2,J1}:2.63598340109;BPTF:2.4754705531;T:2.44518272175;RFX1:2.38439464359;NFKB1_REL_RELA:2.27292644584;DMAP1_NCOR{1,2}_SMARC:2.1501130154;PITX1..3:2.14197759243;ETS1,2:2.10454812661;PAX2:2.0968287398;TBX4,5:2.0908599006;JUN:1.99962778634;HMX1:1.89546662281;TGIF1:1.80250631952;FOXP1:1.74085143054;SPI1:1.60266257228;ATF2:1.47456877986;ATF6:1.44132204818;LEF1_TCF7_TCF7L1,2:1.41981657358;HIF1A:1.31751301886;IRF1,2:1.30754387281;TLX2:1.2990406982;BREu{core}:1.23507152576;NKX2-1,4:1.19550165057;CDX1,2,4:1.17632743801;SPIB:1.15669055422;ZBTB16:1.12438208172;IKZF2:1.05747912754;PAX6:1.04488671771;FOX{I1,J2}:0.996354290082;ELK1,4_GABP{A,B1}:0.904436492712;PAX4:0.835992372998;GATA6:0.825340005708;PPARG:0.77881498675;NKX6-1,2:0.775606502006;NANOG{mouse}:0.613125234483;ZNF384:0.602266957949;EP300:0.580606328728;NFATC1..3:0.574730227209;MYB:0.552104810246;EGR1..3:0.550306040939;FOSL2:0.546632251782;SOX2:0.480332531686;HBP1_HMGB_SSRP1_UBTF:0.46633841802;MAFB:0.437430721428;IRF7:0.422464070285;HOX{A6,A7,B6,B7}:0.3292432712;TFDP1:0.298795549204;RREB1:0.276388415184;SMAD1..7,9:0.256607040191;FOS_FOS{B,L1}_JUN{B,D}:0.249299263637;SREBF1,2:0.223670819177;NFIX:0.20392934323;HMGA1,2:0.129210436867;NFY{A,B,C}:0.0638106026285;PDX1:0.0597262563478;NFIL3:0.0588969352109;BACH2:0.0335258926751;ZEB1:0.0247541657884;MYFfamily:-0.0183699640965;NFE2L1:-0.0441836939011;AHR_ARNT_ARNT2:-0.0525890636833;CUX2:-0.0528015395477;SNAI1..3:-0.0651736069769;STAT2,4,6:-0.0792981893187;FOXA2:-0.105411446845;SOX5:-0.118712089487;TOPORS:-0.119423915518;NFE2:-0.146574422336;NKX3-1:-0.173915293274;AIRE:-0.178876926028;FOXP3:-0.178962643053;TAL1_TCF{3,4,12}:-0.187074315645;CRX:-0.187842952767;MTE{core}:-0.201079416296;NRF1:-0.248079557233;PRRX1,2:-0.258762674316;POU2F1..3:-0.281604308786;MED-1{core}:-0.295698657875;NANOG:-0.309148171848;NR5A1,2:-0.311759732007;PBX1:-0.353705939486;STAT5{A,B}:-0.364391427322;E2F1..5:-0.374663941742;CEBPA,B_DDIT3:-0.378178933837;EVI1:-0.378221761157;FOXL1:-0.39002092737;AR:-0.396527174725;MYOD1:-0.410802810158;HLF:-0.422329202491;NFE2L2:-0.424407172678;GCM1,2:-0.432837541501;YY1:-0.453822103751;RXRA_VDR{dimer}:-0.45940105263;ZFP161:-0.470660085674;PAX5:-0.4745519662;FOXQ1:-0.484169442246;TFAP4:-0.488477863286;MTF1:-0.489617435184;SRF:-0.545197761712;HES1:-0.550797102322;TFAP2B:-0.552669417511;NHLH1,2:-0.563672909606;LMO2:-0.569760460712;GLI1..3:-0.620120671108;HNF1A:-0.643925344766;bHLH_family:-0.646895753239;HNF4A_NR2F1,2:-0.691178235511;XBP1:-0.696925839933;ALX4:-0.713804966394;STAT1,3:-0.720417762312;RBPJ:-0.724254377751;ZBTB6:-0.73213981687;FOXD3:-0.733157340239;PATZ1:-0.751191086236;HOXA9_MEIS1:-0.758866802;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.760097648724;MZF1:-0.764149546016;SPZ1:-0.786017939671;MAZ:-0.794866428704;ZNF148:-0.803516143169;NKX2-2,8:-0.812156823675;ZNF143:-0.838486438955;DBP:-0.854778641283;REST:-0.905132442149;ZNF423:-0.910697712511;FOXM1:-0.917733744615;ZIC1..3:-0.918948137609;VSX1,2:-0.921329762143;HSF1,2:-0.925237097507;SOX{8,9,10}:-0.954051078553;OCT4_SOX2{dimer}:-0.974742861286;SOX17:-0.987104174615;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.998295020036;HAND1,2:-1.06145128232;GFI1:-1.07193549135;POU1F1:-1.08522036868;MEF2{A,B,C,D}:-1.09991761256;HIC1:-1.11155000824;TFAP2{A,C}:-1.13875886353;SP1:-1.17060416333;ALX1:-1.19876491567;ZNF238:-1.23010887498;LHX3,4:-1.23947816499;POU6F1:-1.24979204411;GATA4:-1.29660511963;TFCP2:-1.30440419833;NR1H4:-1.36456303545;ARID5B:-1.40032101548;MYBL2:-1.41175490315;TBP:-1.4286251916;TP53:-1.4671186094;RXR{A,B,G}:-1.47332441016;POU5F1:-1.47686002173;UFEwm:-1.52400777129;CDC5L:-1.54615323175;XCPE1{core}:-1.58323153571;TEF:-1.59647433466;NKX2-3_NKX2-5:-1.65299420261;HOX{A5,B5}:-1.66301440093;GTF2I:-1.66890364307;GTF2A1,2:-1.67546367699;ESRRA:-1.68740163636;GFI1B:-1.73433725861;TEAD1:-1.79340222042;TLX1..3_NFIC{dimer}:-1.82132086224;ADNP_IRX_SIX_ZHX:-1.89015706268;POU3F1..4:-1.91695830848;PAX8:-1.9490270473;EN1,2:-2.00047072706;PRDM1:-2.04231831714;HOX{A4,D4}:-2.08460468431;GZF1:-2.09584265112;ONECUT1,2:-2.16501279144;NR6A1:-2.18857802588;EBF1:-2.35065207729;ESR1:-2.37072897289;KLF4:-2.38087518037;NKX3-2:-2.52752922159;IKZF1:-2.65005295601;PAX1,9:-2.66811734421;NR3C1:-3.19153879684 | |top_motifs=RORA:4.40643880323;PAX3,7:4.10006642284;CREB1:3.59266383175;ATF4:3.49165621849;ATF5_CREB3:3.31829025795;RFX2..5_RFXANK_RFXAP:3.26207926989;RUNX1..3:3.2343750784;FOXO1,3,4:3.04924425332;FOX{D1,D2}:2.92538871625;FOXN1:2.85675310843;ELF1,2,4:2.64904710519;FOX{F1,F2,J1}:2.63598340109;BPTF:2.4754705531;T:2.44518272175;RFX1:2.38439464359;NFKB1_REL_RELA:2.27292644584;DMAP1_NCOR{1,2}_SMARC:2.1501130154;PITX1..3:2.14197759243;ETS1,2:2.10454812661;PAX2:2.0968287398;TBX4,5:2.0908599006;JUN:1.99962778634;HMX1:1.89546662281;TGIF1:1.80250631952;FOXP1:1.74085143054;SPI1:1.60266257228;ATF2:1.47456877986;ATF6:1.44132204818;LEF1_TCF7_TCF7L1,2:1.41981657358;HIF1A:1.31751301886;IRF1,2:1.30754387281;TLX2:1.2990406982;BREu{core}:1.23507152576;NKX2-1,4:1.19550165057;CDX1,2,4:1.17632743801;SPIB:1.15669055422;ZBTB16:1.12438208172;IKZF2:1.05747912754;PAX6:1.04488671771;FOX{I1,J2}:0.996354290082;ELK1,4_GABP{A,B1}:0.904436492712;PAX4:0.835992372998;GATA6:0.825340005708;PPARG:0.77881498675;NKX6-1,2:0.775606502006;NANOG{mouse}:0.613125234483;ZNF384:0.602266957949;EP300:0.580606328728;NFATC1..3:0.574730227209;MYB:0.552104810246;EGR1..3:0.550306040939;FOSL2:0.546632251782;SOX2:0.480332531686;HBP1_HMGB_SSRP1_UBTF:0.46633841802;MAFB:0.437430721428;IRF7:0.422464070285;HOX{A6,A7,B6,B7}:0.3292432712;TFDP1:0.298795549204;RREB1:0.276388415184;SMAD1..7,9:0.256607040191;FOS_FOS{B,L1}_JUN{B,D}:0.249299263637;SREBF1,2:0.223670819177;NFIX:0.20392934323;HMGA1,2:0.129210436867;NFY{A,B,C}:0.0638106026285;PDX1:0.0597262563478;NFIL3:0.0588969352109;BACH2:0.0335258926751;ZEB1:0.0247541657884;MYFfamily:-0.0183699640965;NFE2L1:-0.0441836939011;AHR_ARNT_ARNT2:-0.0525890636833;CUX2:-0.0528015395477;SNAI1..3:-0.0651736069769;STAT2,4,6:-0.0792981893187;FOXA2:-0.105411446845;SOX5:-0.118712089487;TOPORS:-0.119423915518;NFE2:-0.146574422336;NKX3-1:-0.173915293274;AIRE:-0.178876926028;FOXP3:-0.178962643053;TAL1_TCF{3,4,12}:-0.187074315645;CRX:-0.187842952767;MTE{core}:-0.201079416296;NRF1:-0.248079557233;PRRX1,2:-0.258762674316;POU2F1..3:-0.281604308786;MED-1{core}:-0.295698657875;NANOG:-0.309148171848;NR5A1,2:-0.311759732007;PBX1:-0.353705939486;STAT5{A,B}:-0.364391427322;E2F1..5:-0.374663941742;CEBPA,B_DDIT3:-0.378178933837;EVI1:-0.378221761157;FOXL1:-0.39002092737;AR:-0.396527174725;MYOD1:-0.410802810158;HLF:-0.422329202491;NFE2L2:-0.424407172678;GCM1,2:-0.432837541501;YY1:-0.453822103751;RXRA_VDR{dimer}:-0.45940105263;ZFP161:-0.470660085674;PAX5:-0.4745519662;FOXQ1:-0.484169442246;TFAP4:-0.488477863286;MTF1:-0.489617435184;SRF:-0.545197761712;HES1:-0.550797102322;TFAP2B:-0.552669417511;NHLH1,2:-0.563672909606;LMO2:-0.569760460712;GLI1..3:-0.620120671108;HNF1A:-0.643925344766;bHLH_family:-0.646895753239;HNF4A_NR2F1,2:-0.691178235511;XBP1:-0.696925839933;ALX4:-0.713804966394;STAT1,3:-0.720417762312;RBPJ:-0.724254377751;ZBTB6:-0.73213981687;FOXD3:-0.733157340239;PATZ1:-0.751191086236;HOXA9_MEIS1:-0.758866802;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.760097648724;MZF1:-0.764149546016;SPZ1:-0.786017939671;MAZ:-0.794866428704;ZNF148:-0.803516143169;NKX2-2,8:-0.812156823675;ZNF143:-0.838486438955;DBP:-0.854778641283;REST:-0.905132442149;ZNF423:-0.910697712511;FOXM1:-0.917733744615;ZIC1..3:-0.918948137609;VSX1,2:-0.921329762143;HSF1,2:-0.925237097507;SOX{8,9,10}:-0.954051078553;OCT4_SOX2{dimer}:-0.974742861286;SOX17:-0.987104174615;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-0.998295020036;HAND1,2:-1.06145128232;GFI1:-1.07193549135;POU1F1:-1.08522036868;MEF2{A,B,C,D}:-1.09991761256;HIC1:-1.11155000824;TFAP2{A,C}:-1.13875886353;SP1:-1.17060416333;ALX1:-1.19876491567;ZNF238:-1.23010887498;LHX3,4:-1.23947816499;POU6F1:-1.24979204411;GATA4:-1.29660511963;TFCP2:-1.30440419833;NR1H4:-1.36456303545;ARID5B:-1.40032101548;MYBL2:-1.41175490315;TBP:-1.4286251916;TP53:-1.4671186094;RXR{A,B,G}:-1.47332441016;POU5F1:-1.47686002173;UFEwm:-1.52400777129;CDC5L:-1.54615323175;XCPE1{core}:-1.58323153571;TEF:-1.59647433466;NKX2-3_NKX2-5:-1.65299420261;HOX{A5,B5}:-1.66301440093;GTF2I:-1.66890364307;GTF2A1,2:-1.67546367699;ESRRA:-1.68740163636;GFI1B:-1.73433725861;TEAD1:-1.79340222042;TLX1..3_NFIC{dimer}:-1.82132086224;ADNP_IRX_SIX_ZHX:-1.89015706268;POU3F1..4:-1.91695830848;PAX8:-1.9490270473;EN1,2:-2.00047072706;PRDM1:-2.04231831714;HOX{A4,D4}:-2.08460468431;GZF1:-2.09584265112;ONECUT1,2:-2.16501279144;NR6A1:-2.18857802588;EBF1:-2.35065207729;ESR1:-2.37072897289;KLF4:-2.38087518037;NKX3-2:-2.52752922159;IKZF1:-2.65005295601;PAX1,9:-2.66811734421;NR3C1:-3.19153879684 | ||
|xref= | |||
}} | }} | ||
Revision as of 16:17, 17 October 2017
| Name: | CD8+ T Cells, donor1 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs10854,SRhi10010.TTAGGC |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6 |
| CAGEd-oPOSSUM: | link |
| Additional information | ||||||||||||||||||||||||||||
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Sample information
RNA information
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| Download raw sequence, BAM & CTSS | ||||||||||||||
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| RNA-Seq Accession numbers | ||||||||||||||||||||||||||||||||
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Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10854
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs10854
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.817 |
| 10 | 10 | 0.0236 |
| 100 | 100 | 0.931 |
| 101 | 101 | 0.445 |
| 102 | 102 | 0.945 |
| 103 | 103 | 0.328 |
| 104 | 104 | 0.839 |
| 105 | 105 | 0.606 |
| 106 | 106 | 0.377 |
| 107 | 107 | 0.0142 |
| 108 | 108 | 0.432 |
| 109 | 109 | 0.978 |
| 11 | 11 | 0.984 |
| 110 | 110 | 0.188 |
| 111 | 111 | 0.715 |
| 112 | 112 | 0.726 |
| 113 | 113 | 0.314 |
| 114 | 114 | 0.868 |
| 115 | 115 | 0.284 |
| 116 | 116 | 0.112 |
| 117 | 117 | 0.0162 |
| 118 | 118 | 0.644 |
| 119 | 119 | 0.197 |
| 12 | 12 | 0.57 |
| 120 | 120 | 0.262 |
| 121 | 121 | 0.681 |
| 122 | 122 | 0.866 |
| 123 | 123 | 8.73851e-4 |
| 124 | 124 | 0.788 |
| 125 | 125 | 0.432 |
| 126 | 126 | 0.826 |
| 127 | 127 | 0.658 |
| 128 | 128 | 0.765 |
| 129 | 129 | 0.171 |
| 13 | 13 | 0.625 |
| 130 | 130 | 0.317 |
| 131 | 131 | 0.219 |
| 132 | 132 | 0.137 |
| 133 | 133 | 0.943 |
| 134 | 134 | 0.662 |
| 135 | 135 | 0.344 |
| 136 | 136 | 0.933 |
| 137 | 137 | 0.0643 |
| 138 | 138 | 0.727 |
| 139 | 139 | 0.197 |
| 14 | 14 | 0.575 |
| 140 | 140 | 0.946 |
| 141 | 141 | 0.687 |
| 142 | 142 | 0.356 |
| 143 | 143 | 0.0188 |
| 144 | 144 | 0.864 |
| 145 | 145 | 0.462 |
| 146 | 146 | 0.467 |
| 147 | 147 | 0.0165 |
| 148 | 148 | 0.474 |
| 149 | 149 | 0.108 |
| 15 | 15 | 0.456 |
| 150 | 150 | 0.975 |
| 151 | 151 | 0.701 |
| 152 | 152 | 0.725 |
| 153 | 153 | 0.539 |
| 154 | 154 | 0.182 |
| 155 | 155 | 0.0613 |
| 156 | 156 | 0.999 |
| 157 | 157 | 0.571 |
| 158 | 158 | 0.00776 |
| 159 | 159 | 0.764 |
| 16 | 16 | 0.172 |
| 160 | 160 | 0.0144 |
| 161 | 161 | 0.73 |
| 162 | 162 | 0.00913 |
| 163 | 163 | 0.879 |
| 164 | 164 | 0.17 |
| 165 | 165 | 0.811 |
| 166 | 166 | 0.276 |
| 167 | 167 | 0.172 |
| 168 | 168 | 0.578 |
| 169 | 169 | 0.0833 |
| 17 | 17 | 0.507 |
| 18 | 18 | 0.599 |
| 19 | 19 | 0.0163 |
| 2 | 2 | 0.147 |
| 20 | 20 | 0.152 |
| 21 | 21 | 0.711 |
| 22 | 22 | 0.162 |
| 23 | 23 | 0.528 |
| 24 | 24 | 0.557 |
| 25 | 25 | 0.217 |
| 26 | 26 | 0.651 |
| 27 | 27 | 0.497 |
| 28 | 28 | 0.361 |
| 29 | 29 | 0.11 |
| 3 | 3 | 0.828 |
| 30 | 30 | 0.0643 |
| 31 | 31 | 0.534 |
| 32 | 32 | 0.00255 |
| 33 | 33 | 0.411 |
| 34 | 34 | 0.311 |
| 35 | 35 | 0.486 |
| 36 | 36 | 0.137 |
| 37 | 37 | 0.52 |
| 38 | 38 | 0.496 |
| 39 | 39 | 0.38 |
| 4 | 4 | 0.634 |
| 40 | 40 | 0.772 |
| 41 | 41 | 0.13 |
| 42 | 42 | 0.437 |
| 43 | 43 | 0.818 |
| 44 | 44 | 0.596 |
| 45 | 45 | 0.127 |
| 46 | 46 | 0.773 |
| 47 | 47 | 0.875 |
| 48 | 48 | 0.802 |
| 49 | 49 | 0.382 |
| 5 | 5 | 0.725 |
| 50 | 50 | 0.476 |
| 51 | 51 | 0.843 |
| 52 | 52 | 0.774 |
| 53 | 53 | 0.381 |
| 54 | 54 | 0.84 |
| 55 | 55 | 0.524 |
| 56 | 56 | 0.716 |
| 57 | 57 | 0.683 |
| 58 | 58 | 0.244 |
| 59 | 59 | 0.144 |
| 6 | 6 | 0.852 |
| 60 | 60 | 0.738 |
| 61 | 61 | 0.289 |
| 62 | 62 | 0.437 |
| 63 | 63 | 0.649 |
| 64 | 64 | 0.86 |
| 65 | 65 | 0.334 |
| 66 | 66 | 0.68 |
| 67 | 67 | 0.397 |
| 68 | 68 | 0.716 |
| 69 | 69 | 0.732 |
| 7 | 7 | 0.837 |
| 70 | 70 | 0.398 |
| 71 | 71 | 0.468 |
| 72 | 72 | 0.46 |
| 73 | 73 | 0.716 |
| 74 | 74 | 0.764 |
| 75 | 75 | 0.0859 |
| 76 | 76 | 0.179 |
| 77 | 77 | 0.00134 |
| 78 | 78 | 0.93 |
| 79 | 79 | 0.95 |
| 8 | 8 | 0.197 |
| 80 | 80 | 0.0248 |
| 81 | 81 | 0.755 |
| 82 | 82 | 0.849 |
| 83 | 83 | 0.769 |
| 84 | 84 | 0.204 |
| 85 | 85 | 0.89 |
| 86 | 86 | 0.0743 |
| 87 | 87 | 0.993 |
| 88 | 88 | 0.894 |
| 89 | 89 | 0.00213 |
| 9 | 9 | 0.733 |
| 90 | 90 | 0.936 |
| 91 | 91 | 0.918 |
| 92 | 92 | 0.695 |
| 93 | 93 | 0.983 |
| 94 | 94 | 0.392 |
| 95 | 95 | 0.28 |
| 96 | 96 | 0.866 |
| 97 | 97 | 0.311 |
| 98 | 98 | 0.775 |
| 99 | 99 | 1.38602e-6 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs10854
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000030 CD8-positive T cell sample
FF:0000210 human sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000988 (hematopoietic cell)
0000548 (animal cell)
0002371 (somatic cell)
0000542 (lymphocyte)
0000219 (motile cell)
0000738 (leukocyte)
0002087 (nongranular leukocyte)
0002242 (nucleate cell)
0000255 (eukaryotic cell)
0000791 (mature alpha-beta T cell)
0000084 (T cell)
0000789 (alpha-beta T cell)
0002419 (mature T cell)
0000625 (CD8-positive, alpha-beta T cell)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000030 (CD8-positive T cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000134 (mesenchymal cell)
CL:0000051 (common lymphoid progenitor)
CL:0000790 (immature alpha-beta T cell)
