FF:11690-122I7: Difference between revisions

Revision as of 15:34, 15 May 2017

Name:	Lens Epithelial Cells, donor3
Species:	Human (Homo sapiens)
Library ID:	CNhs12572
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	eye
dev stage	NA
sex	NA
age	NA
cell type	lens epithelial cell
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	6756
catalog number	SC6555
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-ethanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004687

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs12572		CAGE		DRX008321		DRR009193

Accession ID Hg19

Library id		BAM		CTSS
CNhs12572		DRZ000618		DRZ002003

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.219
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	-0.209
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	-0.0752
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.563
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.074
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.14
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	-0.361
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0.583
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0.0482
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	-0.0466
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.419
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	-0.392
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.0482
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0.0482
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0.131
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0.0916
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.228
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.382
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.313
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0.644
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12572

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	0.262
MA0003.1	MA0003.1	0.466
MA0004.1	MA0004.1	0.109
MA0006.1	MA0006.1	0.277
MA0007.1	MA0007.1	0.403
MA0009.1	MA0009.1	0.0642
MA0014.1	MA0014.1	0.0355
MA0017.1	MA0017.1	0.0566
MA0018.2	MA0018.2	0.0409
MA0019.1	MA0019.1	0.349
MA0024.1	MA0024.1	0.0558
MA0025.1	MA0025.1	0.477
MA0027.1	MA0027.1	0.796
MA0028.1	MA0028.1	0.502
MA0029.1	MA0029.1	0.707
MA0030.1	MA0030.1	0.98
MA0031.1	MA0031.1	0.511
MA0035.2	MA0035.2	0.964
MA0038.1	MA0038.1	0.265
MA0039.2	MA0039.2	0.526
MA0040.1	MA0040.1	0.545
MA0041.1	MA0041.1	0.366
MA0042.1	MA0042.1	0.553
MA0043.1	MA0043.1	0.182
MA0046.1	MA0046.1	0.374
MA0047.2	MA0047.2	0.637
MA0048.1	MA0048.1	0.73
MA0050.1	MA0050.1	0.00605
MA0051.1	MA0051.1	0.816
MA0052.1	MA0052.1	0.098
MA0055.1	MA0055.1	0.0597
MA0057.1	MA0057.1	0.853
MA0058.1	MA0058.1	0.0508
MA0059.1	MA0059.1	0.032
MA0060.1	MA0060.1	0.23
MA0061.1	MA0061.1	0.0317
MA0062.2	MA0062.2	0.0315
MA0065.2	MA0065.2	0.00106
MA0066.1	MA0066.1	0.196
MA0067.1	MA0067.1	0.0216
MA0068.1	MA0068.1	0.0537
MA0069.1	MA0069.1	0.956
MA0070.1	MA0070.1	0.82
MA0071.1	MA0071.1	0.131
MA0072.1	MA0072.1	0.902
MA0073.1	MA0073.1	0.776
MA0074.1	MA0074.1	0.134
MA0076.1	MA0076.1	0.595
MA0077.1	MA0077.1	0.482
MA0078.1	MA0078.1	0.422
MA0079.2	MA0079.2	0.613
MA0080.2	MA0080.2	7.40192e-6
MA0081.1	MA0081.1	0.218
MA0083.1	MA0083.1	7.8835e-5
MA0084.1	MA0084.1	0.897
MA0087.1	MA0087.1	0.766
MA0088.1	MA0088.1	0.0497
MA0090.1	MA0090.1	2.98753e-4
MA0091.1	MA0091.1	0.967
MA0092.1	MA0092.1	0.905
MA0093.1	MA0093.1	0.148
MA0099.2	MA0099.2	0.745
MA0100.1	MA0100.1	0.994
MA0101.1	MA0101.1	0.536
MA0102.2	MA0102.2	0.0765
MA0103.1	MA0103.1	0.0243
MA0104.2	MA0104.2	0.0115
MA0105.1	MA0105.1	3.59916e-4
MA0106.1	MA0106.1	0.442
MA0107.1	MA0107.1	0.285
MA0108.2	MA0108.2	4.86122e-5
MA0111.1	MA0111.1	0.272
MA0112.2	MA0112.2	3.95966e-4
MA0113.1	MA0113.1	0.692
MA0114.1	MA0114.1	0.0243
MA0115.1	MA0115.1	0.0381
MA0116.1	MA0116.1	2.17276e-4
MA0117.1	MA0117.1	0.529
MA0119.1	MA0119.1	0.236
MA0122.1	MA0122.1	0.479
MA0124.1	MA0124.1	0.483
MA0125.1	MA0125.1	0.997
MA0131.1	MA0131.1	0.645
MA0135.1	MA0135.1	0.266
MA0136.1	MA0136.1	1.31105e-7
MA0137.2	MA0137.2	0.751
MA0138.2	MA0138.2	0.204
MA0139.1	MA0139.1	0.475
MA0140.1	MA0140.1	0.903
MA0141.1	MA0141.1	0.015
MA0142.1	MA0142.1	0.859
MA0143.1	MA0143.1	0.793
MA0144.1	MA0144.1	0.751
MA0145.1	MA0145.1	0.992
MA0146.1	MA0146.1	0.00867
MA0147.1	MA0147.1	0.0162
MA0148.1	MA0148.1	0.598
MA0149.1	MA0149.1	0.06
MA0150.1	MA0150.1	0.168
MA0152.1	MA0152.1	0.247
MA0153.1	MA0153.1	0.166
MA0154.1	MA0154.1	0.0801
MA0155.1	MA0155.1	0.552
MA0156.1	MA0156.1	0.00126
MA0157.1	MA0157.1	0.649
MA0159.1	MA0159.1	0.101
MA0160.1	MA0160.1	0.0104
MA0162.1	MA0162.1	0.368
MA0163.1	MA0163.1	7.85861e-6
MA0164.1	MA0164.1	0.952
MA0258.1	MA0258.1	5.53173e-4
MA0259.1	MA0259.1	0.218

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs12572

Novel motif	Logo	P-value
1	1	0.0251
10	10	0.0316
100	100	0.288
101	101	0.574
102	102	0.168
103	103	0.698
104	104	0.809
105	105	0.982
106	106	0.272
107	107	0.901
108	108	0.747
109	109	0.0301
11	11	0.0257
110	110	0.141
111	111	0.00572
112	112	0.0769
113	113	0.0894
114	114	0.135
115	115	0.382
116	116	0.482
117	117	0.0321
118	118	0.0324
119	119	0.206
12	12	0.317
120	120	0.779
121	121	0.915
122	122	0.867
123	123	2.29713e-6
124	124	0.944
125	125	0.149
126	126	0.424
127	127	0.433
128	128	0.474
129	129	0.179
13	13	0.0646
130	130	0.226
131	131	0.395
132	132	0.908
133	133	0.0266
134	134	0.597
135	135	0.403
136	136	0.89
137	137	0.141
138	138	0.561
139	139	0.0971
14	14	0.491
140	140	0.356
141	141	0.0344
142	142	0.913
143	143	0.931
144	144	0.868
145	145	0.189
146	146	0.929
147	147	0.403
148	148	0.0295
149	149	0.55
15	15	0.324
150	150	0.833
151	151	0.301
152	152	0.701
153	153	0.996
154	154	0.923
155	155	6.20634e-4
156	156	0.162
157	157	0.357
158	158	0.00259
159	159	0.403
16	16	0.508
160	160	0.161
161	161	0.245
162	162	0.737
163	163	0.0528
164	164	0.127
165	165	0.564
166	166	0.125
167	167	0.156
168	168	0.904
169	169	0.0176
17	17	0.357
18	18	0.459
19	19	0.403
2	2	0.89
20	20	0.262
21	21	0.0957
22	22	0.364
23	23	0.747
24	24	0.576
25	25	0.279
26	26	0.00874
27	27	0.827
28	28	0.899
29	29	0.0974
3	3	0.124
30	30	0.295
31	31	0.99
32	32	0.349
33	33	0.181
34	34	0.851
35	35	0.226
36	36	0.0277
37	37	0.228
38	38	0.151
39	39	0.589
4	4	0.593
40	40	0.0243
41	41	0.295
42	42	0.38
43	43	0.12
44	44	0.293
45	45	0.778
46	46	0.0596
47	47	0.0419
48	48	0.121
49	49	0.0348
5	5	0.754
50	50	0.791
51	51	0.517
52	52	0.981
53	53	0.209
54	54	0.611
55	55	0.894
56	56	0.614
57	57	0.27
58	58	0.145
59	59	0.403
6	6	0.174
60	60	0.143
61	61	0.162
62	62	0.137
63	63	0.2
64	64	0.114
65	65	0.222
66	66	0.571
67	67	0.973
68	68	0.665
69	69	0.895
7	7	0.242
70	70	0.0393
71	71	0.0382
72	72	0.844
73	73	0.25
74	74	0.192
75	75	0.012
76	76	0.0511
77	77	0.244
78	78	0.301
79	79	0.817
8	8	0.2
80	80	0.17
81	81	0.301
82	82	0.156
83	83	0.58
84	84	0.769
85	85	0.27
86	86	0.593
87	87	0.789
88	88	0.932
89	89	0.639
9	9	0.898
90	90	0.279
91	91	0.962
92	92	0.832
93	93	0.553
94	94	0.188
95	95	0.0403
96	96	0.0784
97	97	0.319
98	98	0.0278
99	99	0.569

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs12572

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000085 human lens epithelial cell sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000075 (columnar/cuboidal epithelial cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0000325 (stuff accumulating cell)
0000255 (eukaryotic cell)
0000306 (crystallin accumulating cell)
0002222 (vertebrate lens cell)
0002224 (lens epithelial cell)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000970 (eye)
0000019 (camera-type eye)
0000483 (epithelium)
0000033 (head)
0000479 (tissue)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0000047 (simple eye)
0000062 (organ)
0000475 (organism subdivision)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000063 (organ segment)
0001444 (subdivision of head)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000119 (cell layer)
0000490 (unilaminar epithelium)
0010077 (cuboidal epithelium)
0005389 (transparent eye structure)
0000020 (sense organ)
0010371 (ecto-epithelium)
0007625 (pigment epithelium of eye)
0000484 (simple cuboidal epithelium)
0001032 (sensory system)
0010317 (germ layer / neural crest derived structure)
0000965 (lens of camera-type eye)
0001803 (epithelium of lens)
0004088 (ocular region)
0000153 (anterior region of body)
0007811 (craniocervical region)
0002104 (visual system)
0001801 (anterior segment of eyeball)
0004456 (entire sense organ system)
0001456 (face)
0010230 (eyeball of camera-type eye)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000085 (human lens epithelial cell sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
NA

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr3:25470156..25470227,+!p2@RARB!1.53!33.11!RARB;;chr11:31832658..31832681,-!p1@PAX6!1.52!31.94!PAX6;;chr3:170076314..170076334,+!p2@SKIL!1.39!30.64!SKIL;;chr16:86600426..86600441,+!p1@FOXC2!1.38!56.24!FOXC2;;chr18:19749541..19749557,+!p1@GATA6!1.37!69.51!GATA6;;chr2:63277948..63277974,+!p1@OTX1!1.35!21.25!OTX1;;chr3:25469724..25469773,+!p1@RARB!1.34!30.17!RARB;;chr5:92918919..92918942,+!p1@NR2F1!1.27!77.72!NR2F1;;chr20:30433396..30433414,-!p1@FOXS1!1.27!17.61!FOXS1;;chr7:26191809..26191890,+!p1@NFE2L3!1.21!74.67!NFE2L3;;chr11:46299199..46299233,+!p1@CREB3L1!1.19!73.38!CREB3L1;;chr11:31839488..31839515,-!p3@PAX6!1.18!13.97!PAX6;;chr14:61116183..61116208,-!p1@SIX1!1.17!52.01!SIX1;;chr2:19558373..19558392,-!p1@OSR1!1.13!34.28!OSR1;;chr7:35293685..35293718,-!p1@TBX20!1.12!12.21!TBX20;;chr1:151032860..151032918,+!p1@MLLT11!1.10!137.13!MLLT11;;chr5:92918956..92918969,+!p4@NR2F1!1.10!12.68!NR2F1;;chr12:80085061..80085119,-!p6@PAWR!1.08!17.85!PAWR;;chr3:25469815..25469866,+!p3@RARB!1.08!10.92!RARB;;chr12:26277817..26277863,-!p2@BHLHE41!1.07!14.56!BHLHE41;;chr13:100634031..100634045,+!p1@ZIC2!1.07!10.68!ZIC2;;chr4:111558135..111558198,-!p2@PITX2!1.07!10.68!PITX2;;chr11:31832610..31832639,-!p5@PAX6!1.05!10.10!PAX6;;chr10:64576105..64576133,-!p1@EGR2!1.04!20.78!EGR2;;chr1:151032922..151032951,+!p2@MLLT11!1.03!16.32!MLLT11;;chr14:62162285..62162296,+!p3@HIF1A!1.01!48.61!HIF1A;;chr13:45010939..45011033,-!p1@TSC22D1!1.00!604.42!TSC22D1;;chr2:5832508..5832524,+!p1@SOX11!1.00!9.04!SOX11;;chr7:44143925..44143970,+!p1@AEBP1!0.99!200.42!AEBP1;;chr3:178789522..178789564,-!p2@ZMAT3!0.99!66.34!ZMAT3;;chr12:66218255..66218304,+!p3@HMGA2!0.99!23.83!HMGA2;;chr11:61520075..61520136,+!p1@C11orf9!0.99!18.90!C11orf9;;chr11:46299539..46299620,+!p2@CREB3L1!0.99!15.03!CREB3L1;;chr12:80084279..80084293,-!p8@PAWR!0.98!14.44!PAWR;;chr12:66218598..66218645,+!p2@HMGA2!0.97!39.10!HMGA2;;chr4:111544219..111544240,-!p1@PITX2!0.97!8.34!PITX2;;chr13:72441315..72441454,-!p1@DACH1!0.96!16.67!DACH1;;chr15:42749722..42749739,-!p2@ZFP106!0.96!14.91!ZFP106;;chr5:92919375..92919438,+!p6@NR2F1!0.96!8.92!NR2F1;;chr12:80084167..80084197,-!p5@PAWR!0.95!18.90!PAWR;;chr18:19749386..19749404,+!p2@GATA6!0.95!11.62!GATA6;;chr12:80084137..80084165,-!p10@PAWR!0.95!10.33!PAWR;;chr2:45168834..45168847,+!p2@SIX3!0.95!7.87!SIX3;;chr11:31832581..31832601,-!p7@PAX6!0.94!7.75!PAX6;;chr3:170076223..170076242,+!p6@SKIL!0.93!8.45!SKIL;;chr3:25470062..25470084,+!p4@RARB!0.93!7.51!RARB;;chr6:126240380..126240430,+!p2@NCOA7!0.92!19.84!NCOA7;;chrY:21906594..21906622,-!p1@KDM5D!0.92!7.40!KDM5D;;chr2:45169193..45169219,+!p3@SIX3!0.92!7.28!SIX3;;chr14:60975883..60975911,+!p1@SIX6!0.92!7.28!SIX6;;chr14:62162258..62162269,+!p2@HIF1A!0.90!69.27!HIF1A;;chr7:44143978..44143989,+!p2@AEBP1!0.90!13.15!AEBP1;;chr19:58400344..58400364,-!p2@ZNF814!0.89!10.10!ZNF814;;chr12:66218836..66218888,+!p1@HMGA2!0.88!64.46!HMGA2;;chr3:71630980..71631110,-!p3@FOXP1!0.87!23.25!FOXP1;;chr16:86544113..86544145,+!p1@FOXF1!0.87!7.98!FOXF1;;chr5:92919068..92919082,+!p5@NR2F1!0.86!7.63!NR2F1;;chr5:92918768..92918783,+!p8@NR2F1!0.86!6.22!NR2F1;;chr6:85474299..85474324,-!p1@TBX18!0.85!11.39!TBX18;;chr2:63277978..63277995,+!p2@OTX1!0.85!6.11!OTX1;;chr9:126774018..126774055,+!p1@LHX2!0.85!6.11!LHX2;;chr12:125002827..125002855,-!p5@NCOR2!0.84!8.57!NCOR2;;chr5:92919100..92919135,+!p3@NR2F1!0.84!7.28!NR2F1;;chr3:147139053..147139112,+!p5@ZIC1!0.84!5.99!ZIC1;;chr14:60975644..60975673,+!p3@SIX6!0.84!5.87!SIX6;;chr12:80084303..80084332,-!p1@PAWR!0.83!36.51!PAWR;;chr6:43140095..43140145,+!p5@SRF!0.80!6.81!SRF;;chr7:44143997..44144008,+!p3@AEBP1!0.79!6.81!AEBP1;;chr5:72744594..72744609,-!p1@FOXD1!0.78!25.24!FOXD1;;chr12:125002739..125002756,-!p6@NCOR2!0.78!7.75!NCOR2;;chr11:12696071..12696086,+!p3@TEAD1!0.78!6.81!TEAD1;;chr12:80083807..80083859,-!p11@PAWR!0.78!6.46!PAWR;;chr6:43140149..43140177,+!p8@SRF!0.78!5.40!SRF;;chr5:92918894..92918912,+!p2@NR2F1!0.77!17.26!NR2F1;;chr1:170633348..170633399,+!p2@PRRX1!0.77!6.81!PRRX1;;chr13:72441074..72441172,-!p2@DACH1!0.77!4.93!DACH1;;chr2:45168875..45168916,+!p1@SIX3!0.76!4.81!SIX3;;chr11:31832862..31832884,-!p2@PAX6!0.76!4.70!PAX6;;chrX:128657457..128657475,-!p1@SMARCA1!0.75!58.70!SMARCA1;;chr12:26277956..26277980,-!p1@BHLHE41!0.75!18.32!BHLHE41;;chr19:49864746..49864780,-!p2@TEAD2!0.75!6.57!TEAD2;;chr3:170076246..170076261,+!p8@SKIL!0.75!4.58!SKIL;;chr16:86600870..86600921,+!p2@FOXC2!0.75!4.58!FOXC2;;chr7:19157248..19157268,-!p1@TWIST1!0.74!13.62!TWIST1;;chrX:136648643..136648711,+!p2@ZIC3!0.74!4.46!ZIC3;;chr14:62162224..62162254,+!p1@HIF1A!0.72!688.37!HIF1A;;chr16:79634624..79634642,-!p1@MAF!0.72!18.43!MAF;;chr12:80084737..80084763,-!p3@PAWR!0.72!17.73!PAWR;;chr15:96869255..96869291,+!p6@NR2F2!0.72!8.22!NR2F2;;chr13:45009301..45009320,-!p7@TSC22D1!0.72!4.23!TSC22D1;;chr3:147127177..147127194,+!p2@ZIC1!0.72!4.23!ZIC1;;chrY:2803415..2803468,+!p1@ZFY!0.71!4.11!ZFY;;chr16:79633894..79633954,-!p3@MAF!0.70!8.22!MAF;;chr18:19749517..19749531,+!p3@GATA6!0.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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000066;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002224;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000076;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000970;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001801
 |fonse_cell_line=
 |fonse_cell_line_closure=

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FF:11690-122I7: Difference between revisions

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Revision as of 15:34, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0