FF:11929-125I3: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| (25 intermediate revisions by the same user not shown) | |||
| Line 1: | Line 1: | ||
{{f5samples | {{f5samples | ||
|ancestors_in_anatomy_facet=UBERON: | |DRA_sample_Accession=CAGE@SAMD00005551 | ||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL: | |accession_numbers=CAGE;DRX008325;DRR009197;DRZ000622;DRZ002007;DRZ011972;DRZ013357 | ||
|ancestors_in_anatomy_facet=UBERON:0000468,UBERON:0010314,UBERON:0011216,UBERON:0000062,UBERON:0000061,UBERON:0000465,UBERON:0000477,UBERON:0000467,UBERON:0001062,UBERON:0000480,UBERON:0000075,UBERON:0004765,UBERON:0001708,UBERON:0011159,UBERON:0002204,UBERON:0001434,UBERON:0008895,UBERON:0011137,UBERON:0010323 | |||
|ancestors_in_cell_lineage_facet=CL:0000000,CL:0000003,CL:0000548,CL:0000066,CL:0002371,CL:0002159,CL:0000255,CL:0002077,CL:0002166 | |||
|ancestors_in_disease_facet= | |ancestors_in_disease_facet= | ||
|ancestors_in_ff_facet=FF:0000102,FF:0000210,FF:0000002,FF:0000101,FF:0000001,FF:0000087 | |||
|comment= | |comment= | ||
|created_by= | |created_by= | ||
|creation_date= | |creation_date= | ||
|data_phase=2 | |||
|datafreeze_phase=2 | |||
|def= | |def= | ||
|expression_enrichment_score= | |||
|fonse_cell_line= | |fonse_cell_line= | ||
|fonse_cell_line_closure= | |fonse_cell_line_closure= | ||
| Line 35: | Line 42: | ||
|fonse_treatment_closure= | |fonse_treatment_closure= | ||
|has_quality= | |has_quality= | ||
|hg19bam=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor2.CNhs13550.11929-125I3.hg19.nobarcode.bam | |||
|hg19ctss=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor2.CNhs13550.11929-125I3.hg19.ctss.bed.gz | |||
|hg19fasta=http://fantom.gsc.riken.jp/5/datafiles/latest/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor2.CNhs13550.11929-125I3.hg19.nobarcode.rdna.fa.gz | |||
|hg38bam=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor2.CNhs13550.11929-125I3.hg38.nobarcode.bam | |||
|hg38ctss=http://fantom.gsc.riken.jp/5/datafiles/reprocessed/hg38_v2/basic/human.primary_cell.hCAGE/Mallassez-derived%2520cells%252c%2520donor2.CNhs13550.11929-125I3.hg38.nobarcode.ctss.bed.gz | |||
|id=FF:11929-125I3 | |id=FF:11929-125I3 | ||
|is_a=EFO:0002091;;FF: | |is_a=EFO:0002091;;FF:0000087 | ||
|is_obsolete= | |||
|library_id=CNhs13550 | |||
|library_id_phase_based=2:CNhs13550 | |||
|microRNAs= | |||
|microRNAs_nn= | |||
|microRNAs_nonnovel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer/#/human#cage;sample;11929 | |||
|microRNAs_novel_cage=http://fantom.gsc.riken.jp/5/suppl/De_Rie_et_al_2017/vis_viewer_novel/#/human#cage;sample;11929 | |||
|name=Mallassez-derived cells, donor2 | |name=Mallassez-derived cells, donor2 | ||
|namespace= | |namespace= | ||
| Line 44: | Line 63: | ||
|profile_rnaseq= | |profile_rnaseq= | ||
|profile_srnaseq= | |profile_srnaseq= | ||
|refex=http://refex.dbcls.jp/genelist.php?lang | |||
|repeat_enrich_byfamily=0,0,0,0,0.384373856471042,0,0,-0.160318030086386,0.0674361974989848,-0.0754893709504798,-0.282403560576942,0,0,0,0,0,0,0,0,0.639450884026447,0,0.177232354015666,0,0,-0.153323010348428,0,0,0,0,0,-0.0305216987690727,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0.837548951431509,0,-0.166440464465532,0,0,0,0.655870419754355,0,0,0,0,0.18983789477577,0,0,0,0.125794838785565,0,-0.0475278115827902,0,-0.0969923612426051,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125794838785565,0,0,0,-0.0231001091114796,0,0,0,0,0,0,-0.09644460642336,0,0,0,-0.162107282208072,0.00285551319273567,0.0337180987494924,0.125794838785565,0,0,-0.0305991537387217,-0.138477200800895,0,0,0,0.177232354015666,0,0.0337180987494924,0,0,0,0,0,0,0,0,0,0,0,0.0360247716406042,0,0,0,-0.0911846638342791,-0.243721206777266,0,0,0,0,0,0 | |||
|repeat_enrich_byname=0,0,0,0,-0.0305991537387217,0,0,0,0,0,0,0,0,0.125794838785565,0,0,-0.1213840365,0,-0.348291379966444,0.256476683282896,0,0,-0.0500825566837595,0,0,0,0,0,0,0,0,0,0.543571857809489,0,0.0170236459096699,0,0,0,0,-0.0186252810838506,-0.238036033399423,0,-0.0228878032753692,0.196452470048762,0,0,0,0,-0.118870411460184,0,-0.0534432862947559,0.0430746704621472,0,0.638798079108874,-0.055712496781182,0,0,0,0.452835268344042,-0.31667530141084,0,0,-0.0880617530023815,-0.113913421061674,0,0,-0.32360838405265,0,-0.185406057089099,0.255431437983536,0,-0.0423202634659126,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,-0.0574934668214365,-0.259552399179984,0,0,0.177232354015666,0,-0.0155164199848651,0,0,-0.373286155956567,-0.269631976484861,-0.0219650868548205,-0.284744296620353,0,-0.176594888224349,-0.216072801970248,0.108435777680859,-0.162107282208072,-0.0799656518721538,-0.0641868807642828,0,-0.09644460642336,-0.239763042000318,-0.0954855849547306,-0.098649182784655,-0.128750905249413,0.035061710367474,-0.308123254112658,0,0,0,0.175730041595349,0,0,0.0766425236075031,-0.0082782889994133,-0.013486306877803,0.0781781241874725,-0.0608383207383505,-0.461332060119295,-0.0395325284566706,-0.234218748670506,-0.0220094961437901,-0.207519409015095,-0.0269069294666393,0.125794838785565,0,0.00285352884146273,0.0070008413006284,-0.18772034140147,0,-0.21918073068485,-0.000908063578383453,0,-0.0327634981905745,-0.219627093174665,0.0674361974989848,0,-0.0120199927871353,0,0,-0.0789096239802474,0,0,-0.147073376164864,-0.362259789014501,-0.16541936405656,0,0.0286446485697944,0.0674361974989848,0.0461923511237319,0,-0.188074253643771,0.0626259695153249,0,-0.264818128302113,0,-0.0179567830465855,-0.171390277486392,0.0122416576766629,0.00571102638547133,0.0673480119737393,-0.20520034231401,-0.308388825943958,-0.197083959502548,0.0590863837294704,0,0.0376680063102768,0,-0.358273159056659,0.0364678949071032,-0.0976044124396342,-0.0604510580353561,0,0.0145776207368173,0,-0.289662737963545,0,-0.333456543553177,-0.202799829626412,-0.439289374580686,0.0589915957111655,0,-0.319318086630335,1.00410320409562,0.0614920272134838,-0.139791907612816,-0.0443894835564079,0.639450884026447,-0.0245722445490748,-0.243185960767436,-0.123034250856756,0.027127007633363,0,0.00283279001829417,0,0.0674361974989848,-0.10763014700704,-0.109681198978824,0.0674361974989848,-0.0400217014523951,-0.0231001091114796,-0.380998336969206,0.00982376535063047,0.0674361974989848,0,0.01017008176163,0,0,0.527568039365831,0.0592382504162716,-0.552347126459649,-0.185890143987771,0,0.616516740588265,0,0,0.192403350386543,0.0674361974989848,-0.0951829444813811,0,0.0674361974989848,0.0659898832815823,0,0,0,0,0,0,0,0,0,0,0,0,-0.478659616218301,0.124567124087707,0,-0.0668474421431344,0,0.0674361974989848,0,0,0,0.10114845627271,0,0.125794838785565,1.1189307624527,-0.0968332978427447,-0.12301741567642,0.088616177007833,0,0,0,-0.215723402553475,-0.0260042080790581,0,-0.064426508998647,0,0,0,0,-0.0861409897892114,0,0.0674361974989848,0,0,-0.057730457053664,0.0096678372460852,0,0,0,-0.27695440160179,0,0,0,0,-0.00393610283465273,0,0.00368182355726271,0.26499638354287,0,-0.26444099785511,-0.0815818795468414,0,-0.274372315005093,0.254175944015457,0.844014526785666,0,0,-0.261347131789888,0,0,0.0975517815506135,0,0,0,0,0,0,0,0,0,0.00890319182633328,0.0421618008031474,0,0,0,0,0,0,0,0,0,0,0.067955885176812,0.245409865188318,0,0,0,0,0,0,0,0.00961207567058925,-0.0739298855085296,0,0,0,0,0,0,0,0,-0.0169159339180959,0,0,0.125794838785565,0,0,-0.0969923612426051,0,0,0,0,-0.564807121153884,0,0,0.025378383554767,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00247575275011679,-0.0754893709504798,0,0,0,0,0,0.0674361974989848,0,-0.149038459420526,0,0,0,0,1.73561232904358,0.768747712942084,0,0,-0.0373601872901717,0,-0.160318030086386,0,0,0.586102805101917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0628974193927825,0.0337180987494924,0,0,-0.209381447713861,0.031864038152154,-0.14602326588222,-0.139765280981108,0,0,0.191384771626807,0,0,0,0,0,0,0.00237767472096532,0.0674361974989848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0348580438050884,0,0,0,0,0,0,0,-0.0305216987690727,0.502941367859121,0,-0.0920328098005262,0,0,0,0,0,0,0.0146208058881502,0.5270101703866,-0.121670237267965,0,0,0,0.0969846853916855,0.125794838785565,0,-0.0482120461578062,0,0.23596312832938,0,0,0,0,0,0,0,0,0.454510005745146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.153323010348428,0,0,0,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,0,0,0,0,0.122334275757325,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,0,0,0,0,0,-0.0340113632754165,0,0,0.177232354015666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0800184682686384,0,0,0,-0.0872913908714792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.228196512934729,0,0,0,0,0,0,0,0,0.837548951431509,0,0,0,0,-0.0482220752390542,0,-0.0169404347310424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.483067845016728,0,0,0,0,0.0197990868380659,0,0.0628974193927825,0,0,0,0,0.0674361974989848,0,0,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,0,-0.127815769502941,0,0,-0.166514882322339,0,0,0,0,0,0,0,0,0,0,0,0,0.00611601834885837,0,0,0,0,0,0,0,0,0,0.655870419754355,0.37967578955154,0,0,0.0674361974989848,0,0,0,0,0,1.26250232881651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15137025787414,-0.124785498399257,-0.243721206777266,0,0,0,0,0,0.0674361974989848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0966155181422749,0,0,0.111608852113044,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.0112456446310799,0,0,0,0,0,0,0,0,0,0,0.177232354015666,0,0,0,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,0,0,0,0.0337180987494924,0.00402117637681663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125794838785565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449673093087179,0,0,0,0,0,0,0,0,0.0674361974989848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.00982128784629716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125794838785565,0,0,0,0,0,0.0720495432812084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0568165016020975,0,0,0.0337180987494924,0,0,0,0,0.0545363570186648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0674361974989848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639450884026447,0,0,0,0.0391576358752204,0,0,0,0,0,0,0,0,0,0,0,0.0600064110682255,0,0,0,0,0,0.00200151270110914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088616177007833,0,0,0,0.0974903553506876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.097343627213097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.132956589778862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088616177007833,0,0,0,0,0,0,0,0,0,0,0,0.0337180987494924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118878978401827,0.0628974193927825,0,0,0,0,0,0,0,0,0,-0.0412500915278073,0.0337180987494924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,-0.354107592196019,0,0.125794838785565,1.29340710872243,0,-0.0714614288820865,-0.0377374947631118,0,0,0,0,0,-0.0220203204819844,0,0,0,0,0,0,0,0.239700227152078,0,0,-0.0400762477245316,0,0,-0.0744410830311122,0.0674361974989848,0,0,0,0,0,0.125794838785565,0,0,0,0,0,0,0,0,0,0.0674361974989848,0,0,0,0,0,0.0337180987494924,-0.212635897823981,0,-0.0713203055960754,-0.397074688522015,0,0,-0.10992336370616,0,0,-0.0367311208382308,0,0,-0.174992895090299,-0.354883902895152,0.0674361974989848,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190884855576523,0.0674361974989848,0,0,-0.0568589461625992,-0.269475635594569,0.0674361974989848,-0.253041415564859,0,0,0.43239296982223,0,0,0.0674361974989848,0.0298354314119776 | |||
|rna_box=125 | |rna_box=125 | ||
|rna_catalog_number= | |rna_catalog_number= | ||
| Line 57: | Line 79: | ||
|rna_weight_ug=21.7974 | |rna_weight_ug=21.7974 | ||
|sample_age=29 | |sample_age=29 | ||
|sample_category=primary cells | |||
|sample_cell_catalog= | |sample_cell_catalog= | ||
|sample_cell_line= | |sample_cell_line= | ||
| Line 69: | Line 92: | ||
|sample_ethnicity= | |sample_ethnicity= | ||
|sample_experimental_condition= | |sample_experimental_condition= | ||
|sample_gostat=GO:0044464;cell part;0!GO:0005622;intracellular;0!GO:0044424;intracellular part;2.36420107368983e-224!GO:0005737;cytoplasm;2.8427202614134e-203!GO:0043226;organelle;5.07636845264881e-168!GO:0043229;intracellular organelle;2.22394083041478e-167!GO:0043231;intracellular membrane-bound organelle;2.08355276389224e-154!GO:0043227;membrane-bound organelle;2.46866569913817e-154!GO:0044444;cytoplasmic part;3.51058647936211e-134!GO:0044422;organelle part;8.58173029920153e-130!GO:0044446;intracellular organelle part;3.11541637675942e-128!GO:0032991;macromolecular complex;7.47956875418337e-88!GO:0030529;ribonucleoprotein complex;1.20422402103605e-76!GO:0005515;protein binding;4.70768285341548e-75!GO:0044238;primary metabolic process;2.67059395899735e-70!GO:0044237;cellular metabolic process;2.78745542897449e-68!GO:0043170;macromolecule metabolic process;1.40445075327552e-64!GO:0043233;organelle lumen;1.03481056492696e-60!GO:0031974;membrane-enclosed lumen;1.03481056492696e-60!GO:0003723;RNA binding;7.32149617293286e-59!GO:0005739;mitochondrion;5.83057597002401e-56!GO:0044428;nuclear part;8.74333141694036e-56!GO:0019538;protein metabolic process;6.40071561682553e-54!GO:0031090;organelle membrane;2.51334060738785e-53!GO:0015031;protein transport;6.72788110185901e-49!GO:0005634;nucleus;1.285880434326e-48!GO:0033036;macromolecule localization;1.82267672578526e-48!GO:0016043;cellular component organization and biogenesis;4.22753625464116e-47!GO:0044260;cellular macromolecule metabolic process;1.75652256038003e-46!GO:0044267;cellular protein metabolic process;2.29783555194762e-46!GO:0005840;ribosome;2.5824383723871e-46!GO:0006412;translation;3.98691202752754e-46!GO:0045184;establishment of protein localization;7.65290545402321e-46!GO:0008104;protein localization;1.94850477929982e-45!GO:0043234;protein complex;3.77345892453901e-44!GO:0003735;structural constituent of ribosome;4.38714294932908e-41!GO:0006396;RNA processing;1.08756927765419e-40!GO:0009058;biosynthetic process;3.32252371756331e-40!GO:0046907;intracellular transport;1.59432804118496e-39!GO:0009059;macromolecule biosynthetic process;4.16948523393527e-38!GO:0005829;cytosol;9.71490109430497e-38!GO:0044429;mitochondrial part;1.2651863822152e-37!GO:0031981;nuclear lumen;1.7852398344212e-35!GO:0033279;ribosomal subunit;3.19386401969311e-34!GO:0044249;cellular biosynthetic process;5.69375371671287e-34!GO:0031967;organelle envelope;5.99221719053729e-33!GO:0016071;mRNA metabolic process;1.11438769402917e-32!GO:0031975;envelope;1.34807611130807e-32!GO:0006886;intracellular protein transport;1.1917103213497e-31!GO:0043228;non-membrane-bound organelle;2.15128825748133e-31!GO:0043232;intracellular non-membrane-bound organelle;2.15128825748133e-31!GO:0008380;RNA splicing;2.27093416175665e-31!GO:0043283;biopolymer metabolic process;5.75258745453042e-31!GO:0065003;macromolecular complex assembly;3.34718370827206e-29!GO:0022613;ribonucleoprotein complex biogenesis and assembly;1.51758699531132e-28!GO:0006397;mRNA processing;3.33759929464861e-28!GO:0010467;gene expression;5.18536259905606e-28!GO:0051649;establishment of cellular localization;8.82344864633898e-27!GO:0051641;cellular localization;1.21494039146604e-26!GO:0022607;cellular component assembly;1.25401866734331e-26!GO:0006996;organelle organization and biogenesis;1.43263186863082e-26!GO:0005830;cytosolic ribosome (sensu Eukaryota);2.8519915605042e-25!GO:0012505;endomembrane system;5.86521760340702e-25!GO:0005740;mitochondrial envelope;3.23524098512227e-24!GO:0005783;endoplasmic reticulum;3.80808390011441e-24!GO:0006139;nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;7.82315855663392e-23!GO:0005681;spliceosome;1.05057507961014e-22!GO:0031966;mitochondrial membrane;2.1481414226511e-22!GO:0006457;protein folding;3.05847221975478e-22!GO:0044445;cytosolic part;4.59252738151001e-22!GO:0019866;organelle inner membrane;3.20516644995795e-21!GO:0006119;oxidative phosphorylation;1.10806166249887e-20!GO:0005654;nucleoplasm;1.34690173365284e-20!GO:0005794;Golgi apparatus;3.98468978296491e-20!GO:0005743;mitochondrial inner membrane;4.27842864398178e-20!GO:0016818;hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides;8.09650226830977e-20!GO:0016462;pyrophosphatase activity;8.74584008641946e-20!GO:0016817;hydrolase activity, acting on acid anhydrides;1.18250021987187e-19!GO:0044432;endoplasmic reticulum part;1.61531614711306e-19!GO:0000166;nucleotide binding;3.89060615349004e-19!GO:0017111;nucleoside-triphosphatase activity;6.38372702110657e-19!GO:0044455;mitochondrial membrane part;8.03291958705339e-19!GO:0016874;ligase activity;9.59894159160213e-19!GO:0022618;protein-RNA complex assembly;1.45643054739284e-18!GO:0048770;pigment granule;6.745844171327e-18!GO:0042470;melanosome;6.745844171327e-18!GO:0015934;large ribosomal subunit;1.02017473498478e-17!GO:0015935;small ribosomal subunit;2.1783075273566e-17!GO:0006512;ubiquitin cycle;2.25402144299271e-17!GO:0051603;proteolysis involved in cellular protein catabolic process;3.4130852744474e-17!GO:0043285;biopolymer catabolic process;4.1429629160667e-17!GO:0019941;modification-dependent protein catabolic process;7.48774770754928e-17!GO:0043632;modification-dependent macromolecule catabolic process;7.48774770754928e-17!GO:0005730;nucleolus;9.75206080146761e-17!GO:0044257;cellular protein catabolic process;1.00388026773556e-16!GO:0044451;nucleoplasm part;1.06869397066389e-16!GO:0006511;ubiquitin-dependent protein catabolic process;1.84018188585044e-16!GO:0030163;protein catabolic process;3.19440795614153e-16!GO:0031980;mitochondrial lumen;3.97962353042274e-16!GO:0005759;mitochondrial matrix;3.97962353042274e-16!GO:0048193;Golgi vesicle transport;8.45323620690909e-16!GO:0012501;programmed cell death;1.20294167775164e-15!GO:0016192;vesicle-mediated transport;1.38074006948342e-15!GO:0000502;proteasome complex (sensu Eukaryota);2.06336981265438e-15!GO:0006915;apoptosis;2.42296416150075e-15!GO:0044265;cellular macromolecule catabolic process;3.26670569305655e-15!GO:0006605;protein targeting;6.76068265466871e-15!GO:0042175;nuclear envelope-endoplasmic reticulum network;9.02442845239062e-15!GO:0051186;cofactor metabolic process;9.46932573074754e-15!GO:0051082;unfolded protein binding;1.04986373114939e-14!GO:0009057;macromolecule catabolic process;1.13539815997386e-14!GO:0016655;oxidoreductase activity, acting on NADH or NADPH, quinone or similar compound as acceptor;1.18586569099073e-14!GO:0005789;endoplasmic reticulum membrane;1.86179286103684e-14!GO:0006259;DNA metabolic process;1.93546071561042e-14!GO:0007049;cell cycle;2.10728008453382e-14!GO:0005746;mitochondrial respiratory chain;3.58208267213021e-14!GO:0008219;cell death;4.50755232516171e-14!GO:0016265;death;4.50755232516171e-14!GO:0017076;purine nucleotide binding;5.27724647935729e-14!GO:0032553;ribonucleotide binding;7.18325773302493e-14!GO:0032555;purine ribonucleotide binding;7.18325773302493e-14!GO:0008135;translation factor activity, nucleic acid binding;1.16984503317596e-13!GO:0008134;transcription factor binding;1.16984503317596e-13!GO:0050136;NADH dehydrogenase (quinone) activity;1.44454457437233e-13!GO:0003954;NADH dehydrogenase activity;1.44454457437233e-13!GO:0008137;NADH dehydrogenase (ubiquinone) activity;1.44454457437233e-13!GO:0043412;biopolymer modification;2.32756958951091e-13!GO:0044248;cellular catabolic process;3.46846798621132e-13!GO:0016651;oxidoreductase activity, acting on NADH or NADPH;4.70158952476862e-13!GO:0005842;cytosolic large ribosomal subunit (sensu Eukaryota);5.54362184714325e-13!GO:0005761;mitochondrial ribosome;8.42247221505577e-13!GO:0000313;organellar ribosome;8.42247221505577e-13!GO:0005843;cytosolic small ribosomal subunit (sensu Eukaryota);1.04406265358103e-12!GO:0006413;translational initiation;1.81278223370638e-12!GO:0006464;protein modification process;2.10584793768335e-12!GO:0006732;coenzyme metabolic process;4.8170136481219e-12!GO:0042775;organelle ATP synthesis coupled electron transport;7.39805143306374e-12!GO:0042773;ATP synthesis coupled electron transport;7.39805143306374e-12!GO:0030964;NADH dehydrogenase complex (quinone);7.60347620261182e-12!GO:0045271;respiratory chain complex I;7.60347620261182e-12!GO:0005747;mitochondrial respiratory chain complex I;7.60347620261182e-12!GO:0003743;translation initiation factor activity;7.7238598384005e-12!GO:0000398;nuclear mRNA splicing, via spliceosome;7.89491552300932e-12!GO:0000375;RNA splicing, via transesterification reactions;7.89491552300932e-12!GO:0000377;RNA splicing, via transesterification reactions with bulged adenosine as nucleophile;7.89491552300932e-12!GO:0019787;small conjugating protein ligase activity;1.10016950646831e-11!GO:0006461;protein complex assembly;1.31655275833035e-11!GO:0016879;ligase activity, forming carbon-nitrogen bonds;2.01346357233729e-11!GO:0006120;mitochondrial electron transport, NADH to ubiquinone;2.06858759658773e-11!GO:0008639;small protein conjugating enzyme activity;2.13143493694638e-11!GO:0004842;ubiquitin-protein ligase activity;2.99135453557433e-11!GO:0008565;protein transporter activity;3.10280621433368e-11!GO:0043067;regulation of programmed cell death;4.63554701737217e-11!GO:0042981;regulation of apoptosis;5.02675927866729e-11!GO:0043123;positive regulation of I-kappaB kinase/NF-kappaB cascade;5.86955930873962e-11!GO:0003676;nucleic acid binding;6.26626037240837e-11!GO:0006446;regulation of translational initiation;7.99244714010807e-11!GO:0042254;ribosome biogenesis and assembly;1.0097667421513e-10!GO:0016881;acid-amino acid ligase activity;1.84793526382402e-10!GO:0043122;regulation of I-kappaB kinase/NF-kappaB cascade;1.95323665979599e-10!GO:0005793;ER-Golgi intermediate compartment;2.59132142039903e-10!GO:0043687;post-translational protein modification;2.69306497076456e-10!GO:0048475;coated membrane;2.96868628309648e-10!GO:0030117;membrane coat;2.96868628309648e-10!GO:0006974;response to DNA damage stimulus;4.76276734355651e-10!GO:0005524;ATP binding;4.93081099376686e-10!GO:0003924;GTPase activity;4.93865440858715e-10!GO:0022402;cell cycle process;6.29136229526867e-10!GO:0016070;RNA metabolic process;6.54133696400442e-10!GO:0007249;I-kappaB kinase/NF-kappaB cascade;7.80143711055312e-10!GO:0030554;adenyl nucleotide binding;1.04394036711492e-09!GO:0044431;Golgi apparatus part;1.07612806311322e-09!GO:0032559;adenyl ribonucleotide binding;1.12850131993098e-09!GO:0009259;ribonucleotide metabolic process;1.2447290250012e-09!GO:0009055;electron carrier activity;1.29934140301061e-09!GO:0016604;nuclear body;1.43081714985501e-09!GO:0030120;vesicle coat;1.50696246791205e-09!GO:0030662;coated vesicle membrane;1.50696246791205e-09!GO:0006913;nucleocytoplasmic transport;1.58761150687134e-09!GO:0005768;endosome;1.67733676967529e-09!GO:0005635;nuclear envelope;2.60345252275431e-09!GO:0048523;negative regulation of cellular process;2.68763057519096e-09!GO:0051169;nuclear transport;3.22185721266567e-09!GO:0046961;hydrogen ion transporting ATPase activity, rotational mechanism;3.55513566041912e-09!GO:0009056;catabolic process;4.04103606950813e-09!GO:0006888;ER to Golgi vesicle-mediated transport;6.28420533508477e-09!GO:0009141;nucleoside triphosphate metabolic process;7.39549795587567e-09!GO:0031965;nuclear membrane;7.92659548636586e-09!GO:0046933;hydrogen ion transporting ATP synthase activity, rotational mechanism;8.06444716926961e-09!GO:0009150;purine ribonucleotide metabolic process;1.06944804481968e-08!GO:0006163;purine nucleotide metabolic process;1.14155534261817e-08!GO:0000074;regulation of progression through cell cycle;1.21402674872697e-08!GO:0051726;regulation of cell cycle;1.63843762610296e-08!GO:0009199;ribonucleoside triphosphate metabolic process;1.7640906019533e-08!GO:0016607;nuclear speck;1.94144996447446e-08!GO:0000278;mitotic cell cycle;2.09744040987178e-08!GO:0051246;regulation of protein metabolic process;2.31617300523666e-08!GO:0043069;negative regulation of programmed cell death;2.34201869368766e-08!GO:0004386;helicase activity;2.61406680736233e-08!GO:0009260;ribonucleotide biosynthetic process;3.25177623206979e-08!GO:0009205;purine ribonucleoside triphosphate metabolic process;3.50150433004602e-08!GO:0009144;purine nucleoside triphosphate metabolic process;3.50150433004602e-08!GO:0044453;nuclear membrane part;3.50150433004602e-08!GO:0015986;ATP synthesis coupled proton transport;3.81767308482945e-08!GO:0015985;energy coupled proton transport, down electrochemical gradient;3.81767308482945e-08!GO:0042623;ATPase activity, coupled;4.77370333041502e-08!GO:0006281;DNA repair;5.50924776188631e-08!GO:0003712;transcription cofactor activity;5.57611494371248e-08!GO:0016887;ATPase activity;5.75981614917388e-08!GO:0009142;nucleoside triphosphate biosynthetic process;6.11643766760928e-08!GO:0009201;ribonucleoside triphosphate biosynthetic process;6.11643766760928e-08!GO:0000139;Golgi membrane;6.23562296999037e-08!GO:0048519;negative regulation of biological process;6.73082965918794e-08!GO:0006399;tRNA metabolic process;6.90184101642021e-08!GO:0043066;negative regulation of apoptosis;6.94626983743166e-08!GO:0009152;purine ribonucleotide biosynthetic process;8.7022355017593e-08!GO:0006164;purine nucleotide biosynthetic process;9.33511901101934e-08!GO:0051188;cofactor biosynthetic process;9.48905029881963e-08!GO:0005525;GTP binding;1.15582039307055e-07!GO:0009206;purine ribonucleoside triphosphate biosynthetic process;1.2499908158149e-07!GO:0009145;purine nucleoside triphosphate biosynthetic process;1.2499908158149e-07!GO:0046034;ATP metabolic process;1.8084629402276e-07!GO:0006916;anti-apoptosis;1.81733002334962e-07!GO:0017038;protein import;1.85739052664655e-07!GO:0032446;protein modification by small protein conjugation;2.61374514638247e-07!GO:0055086;nucleobase, nucleoside and nucleotide metabolic process;2.63969231907962e-07!GO:0009060;aerobic respiration;2.96350333912975e-07!GO:0008026;ATP-dependent helicase activity;3.58065499437331e-07!GO:0005773;vacuole;4.71285087257725e-07!GO:0016567;protein ubiquitination;4.82316416093965e-07!GO:0019829;cation-transporting ATPase activity;5.14068191600007e-07!GO:0006754;ATP biosynthetic process;5.38801918057223e-07!GO:0006753;nucleoside phosphate metabolic process;5.38801918057223e-07!GO:0009719;response to endogenous stimulus;5.91397889288611e-07!GO:0007005;mitochondrion organization and biogenesis;6.82502008414706e-07!GO:0045333;cellular respiration;7.00427036954872e-07!GO:0016787;hydrolase activity;7.41875653293271e-07!GO:0030532;small nuclear ribonucleoprotein complex;7.66321738713587e-07!GO:0009967;positive regulation of signal transduction;9.66388480406221e-07!GO:0007243;protein kinase cascade;1.02634136976273e-06!GO:0050794;regulation of cellular process;1.09317195217073e-06!GO:0016876;ligase activity, forming aminoacyl-tRNA and related compounds;1.1484285584042e-06!GO:0004812;aminoacyl-tRNA ligase activity;1.1484285584042e-06!GO:0016875;ligase activity, forming carbon-oxygen bonds;1.1484285584042e-06!GO:0031988;membrane-bound vesicle;1.17186038930238e-06!GO:0005643;nuclear pore;1.19097334725257e-06!GO:0006752;group transfer coenzyme metabolic process;1.323254674426e-06!GO:0016023;cytoplasmic membrane-bound vesicle;1.48562072871038e-06!GO:0043038;amino acid activation;1.48562072871038e-06!GO:0006418;tRNA aminoacylation for protein translation;1.48562072871038e-06!GO:0043039;tRNA aminoacylation;1.48562072871038e-06!GO:0009117;nucleotide metabolic process;1.55768757741113e-06!GO:0006099;tricarboxylic acid cycle;1.59643225403664e-06!GO:0046356;acetyl-CoA catabolic process;1.59643225403664e-06!GO:0016469;proton-transporting two-sector ATPase complex;2.09723259799724e-06!GO:0009108;coenzyme biosynthetic process;2.11860973452955e-06!GO:0048522;positive regulation of cellular process;2.11877196564165e-06!GO:0006364;rRNA processing;2.25688564697889e-06!GO:0044440;endosomal part;2.34181215430709e-06!GO:0010008;endosome membrane;2.34181215430709e-06!GO:0005788;endoplasmic reticulum lumen;2.35146628857918e-06!GO:0016072;rRNA metabolic process;2.54821753378871e-06!GO:0005798;Golgi-associated vesicle;2.76213755870665e-06!GO:0032561;guanyl ribonucleotide binding;2.81883790954706e-06!GO:0019001;guanyl nucleotide binding;2.81883790954706e-06!GO:0065002;intracellular protein transport across a membrane;2.87213878583211e-06!GO:0031982;vesicle;2.87840694356247e-06!GO:0031252;leading edge;3.31496742177361e-06!GO:0015078;hydrogen ion transmembrane transporter activity;3.81576835614471e-06!GO:0015630;microtubule cytoskeleton;3.91833208351191e-06!GO:0000323;lytic vacuole;4.04378960175314e-06!GO:0005764;lysosome;4.04378960175314e-06!GO:0016491;oxidoreductase activity;4.49156315016832e-06!GO:0005770;late endosome;4.87164156553458e-06!GO:0031410;cytoplasmic vesicle;4.9116790507964e-06!GO:0051187;cofactor catabolic process;5.4225749333164e-06!GO:0006084;acetyl-CoA metabolic process;5.4225749333164e-06!GO:0050657;nucleic acid transport;5.43804667807141e-06!GO:0051236;establishment of RNA localization;5.43804667807141e-06!GO:0050658;RNA transport;5.43804667807141e-06!GO:0006613;cotranslational protein targeting to membrane;6.3204841529554e-06!GO:0016591;DNA-directed RNA polymerase II, holoenzyme;6.50408220690686e-06!GO:0006403;RNA localization;6.5782315411695e-06!GO:0045259;proton-transporting ATP synthase complex;6.59536386758907e-06!GO:0005839;proteasome core complex (sensu Eukaryota);7.59864901938147e-06!GO:0051170;nuclear import;7.89873408262217e-06!GO:0016779;nucleotidyltransferase activity;8.06731848269201e-06!GO:0016740;transferase activity;9.31779134790602e-06!GO:0006366;transcription from RNA polymerase II promoter;9.85525847760928e-06!GO:0043623;cellular protein complex assembly;1.05484257230639e-05!GO:0009109;coenzyme catabolic process;1.10404981906528e-05!GO:0003755;peptidyl-prolyl cis-trans isomerase activity;1.1065370251406e-05!GO:0007010;cytoskeleton organization and biogenesis;1.1065370251406e-05!GO:0000245;spliceosome assembly;1.33793653210339e-05!GO:0000087;M phase of mitotic cell cycle;1.4376476493028e-05!GO:0016859;cis-trans isomerase activity;1.44172391813113e-05!GO:0016853;isomerase activity;1.587916754355e-05!GO:0006325;establishment and/or maintenance of chromatin architecture;1.71277627143191e-05!GO:0007067;mitosis;2.12905857348228e-05!GO:0046930;pore complex;2.16877814803331e-05!GO:0030118;clathrin coat;2.21792952016843e-05!GO:0051301;cell division;2.2274779928298e-05!GO:0051789;response to protein stimulus;2.2274779928298e-05!GO:0006986;response to unfolded protein;2.2274779928298e-05!GO:0051276;chromosome organization and biogenesis;2.23567009089255e-05!GO:0006606;protein import into nucleus;2.25377927788686e-05!GO:0031202;RNA splicing factor activity, transesterification mechanism;2.37606207144367e-05!GO:0008654;phospholipid biosynthetic process;2.60941496475862e-05!GO:0004298;threonine endopeptidase activity;2.77129590068357e-05!GO:0008092;cytoskeletal protein binding;3.07656451992131e-05!GO:0006612;protein targeting to membrane;3.68391103861386e-05!GO:0006323;DNA packaging;3.78621992341924e-05!GO:0043566;structure-specific DNA binding;4.08865706237361e-05!GO:0045786;negative regulation of progression through cell cycle;5.82974981224704e-05!GO:0003724;RNA helicase activity;5.90118722828768e-05!GO:0005769;early endosome;6.53060742381872e-05!GO:0000151;ubiquitin ligase complex;6.80424902892668e-05!GO:0030867;rough endoplasmic reticulum membrane;7.24815189633933e-05!GO:0022403;cell cycle phase;8.18605832200193e-05!GO:0030119;AP-type membrane coat adaptor complex;8.24439005359074e-05!GO:0015931;nucleobase, nucleoside, nucleotide and nucleic acid transport;8.64168719856245e-05!GO:0005852;eukaryotic translation initiation factor 3 complex;9.15026122018834e-05!GO:0006260;DNA replication;9.39815112514774e-05!GO:0045454;cell redox homeostasis;0.000100992955930332!GO:0043021;ribonucleoprotein binding;0.000108459841935755!GO:0005905;coated pit;0.000108561824180245!GO:0051028;mRNA transport;0.000113177591140343!GO:0048471;perinuclear region of cytoplasm;0.000114670570434091!GO:0030036;actin cytoskeleton organization and biogenesis;0.000116802412205022!GO:0005667;transcription factor complex;0.000123746746363323!GO:0065009;regulation of a molecular function;0.000124877917937145!GO:0003697;single-stranded DNA binding;0.000142520172228797!GO:0006793;phosphorus metabolic process;0.000154975109608197!GO:0006796;phosphate metabolic process;0.000154975109608197!GO:0005813;centrosome;0.000177554622150283!GO:0030131;clathrin adaptor complex;0.000180687314013073!GO:0031324;negative regulation of cellular metabolic process;0.00018214411643087!GO:0005694;chromosome;0.000192640456098749!GO:0005762;mitochondrial large ribosomal subunit;0.000199992378289167!GO:0000315;organellar large ribosomal subunit;0.000199992378289167!GO:0048518;positive regulation of biological process;0.000200468427451132!GO:0042802;identical protein binding;0.000213259594143882!GO:0016126;sterol biosynthetic process;0.000228736469518784!GO:0030658;transport vesicle membrane;0.000239776345715726!GO:0043065;positive regulation of apoptosis;0.000242710416851953!GO:0050789;regulation of biological process;0.000246070197883327!GO:0005885;Arp2/3 protein complex;0.000262493326189605!GO:0001726;ruffle;0.0002882542494746!GO:0030133;transport vesicle;0.000297349781047578!GO:0015077;monovalent inorganic cation transmembrane transporter activity;0.000297442076877879!GO:0004576;oligosaccharyl transferase activity;0.000340465633204542!GO:0043068;positive regulation of programmed cell death;0.000340465633204542!GO:0005791;rough endoplasmic reticulum;0.000347135501352818!GO:0003714;transcription corepressor activity;0.000351175283723082!GO:0005048;signal sequence binding;0.000352477413499506!GO:0003713;transcription coactivator activity;0.000360053292880995!GO:0006091;generation of precursor metabolites and energy;0.000363773574231477!GO:0000314;organellar small ribosomal subunit;0.000364778440754567!GO:0005763;mitochondrial small ribosomal subunit;0.000364778440754567!GO:0008250;oligosaccharyl transferase complex;0.000376356647351736!GO:0016568;chromatin modification;0.000378006584578865!GO:0030663;COPI coated vesicle membrane;0.000401207917577196!GO:0030126;COPI vesicle coat;0.000401207917577196!GO:0004579;dolichyl-diphosphooligosaccharide-protein glycotransferase activity;0.000405361080389302!GO:0019899;enzyme binding;0.000435687493198257!GO:0030029;actin filament-based process;0.000435687493198257!GO:0008632;apoptotic program;0.000447137164038179!GO:0016197;endosome transport;0.000451811741031254!GO:0048468;cell development;0.000452599220215302!GO:0051427;hormone receptor binding;0.000467336471915261!GO:0033178;proton-transporting two-sector ATPase complex, catalytic domain;0.00047746876225442!GO:0045045;secretory pathway;0.000540123201674062!GO:0005815;microtubule organizing center;0.000573234754879721!GO:0016044;membrane organization and biogenesis;0.000603969785745982!GO:0033116;ER-Golgi intermediate compartment membrane;0.000646129859940537!GO:0007264;small GTPase mediated signal transduction;0.000654371490149353!GO:0005838;proteasome regulatory particle (sensu Eukaryota);0.000659109600083882!GO:0008186;RNA-dependent ATPase activity;0.000671966525492325!GO:0009892;negative regulation of metabolic process;0.000776854270626979!GO:0016310;phosphorylation;0.000820088460621841!GO:0051920;peroxiredoxin activity;0.000881747355425453!GO:0035257;nuclear hormone receptor binding;0.000911119279426291!GO:0045261;proton-transporting ATP synthase complex, catalytic core F(1);0.000916557397186129!GO:0030660;Golgi-associated vesicle membrane;0.000948516157307818!GO:0018196;peptidyl-asparagine modification;0.000950414672128987!GO:0018279;protein amino acid N-linked glycosylation via asparagine;0.000950414672128987!GO:0031072;heat shock protein binding;0.000982773688694093!GO:0046489;phosphoinositide biosynthetic process;0.00099198997795836!GO:0006891;intra-Golgi vesicle-mediated transport;0.000992661470527948!GO:0005753;mitochondrial proton-transporting ATP synthase complex;0.000997910826789518!GO:0016772;transferase activity, transferring phosphorus-containing groups;0.00102747407484759!GO:0015980;energy derivation by oxidation of organic compounds;0.00106189428224777!GO:0044427;chromosomal part;0.00111746932533797!GO:0042625;ATPase activity, coupled to transmembrane movement of ions;0.00114160525398074!GO:0030132;clathrin coat of coated pit;0.0011452666972685!GO:0030137;COPI-coated vesicle;0.00116863896438345!GO:0045934;negative regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.00125731065628888!GO:0016564;transcription repressor activity;0.00140844995341874!GO:0008610;lipid biosynthetic process;0.00142887783614055!GO:0006695;cholesterol biosynthetic process;0.00154449672396981!GO:0000279;M phase;0.00163079624712339!GO:0048500;signal recognition particle;0.0016424459333995!GO:0046474;glycerophospholipid biosynthetic process;0.00164335461590535!GO:0004004;ATP-dependent RNA helicase activity;0.00168536612349877!GO:0065004;protein-DNA complex assembly;0.00177636502812078!GO:0003899;DNA-directed RNA polymerase activity;0.00183005888117938!GO:0030659;cytoplasmic vesicle membrane;0.00184150302013197!GO:0051252;regulation of RNA metabolic process;0.00190582902240335!GO:0031968;organelle outer membrane;0.00190963243323226!GO:0030125;clathrin vesicle coat;0.00193813979888905!GO:0030665;clathrin coated vesicle membrane;0.00193813979888905!GO:0046467;membrane lipid biosynthetic process;0.00195981355521361!GO:0050790;regulation of catalytic activity;0.00197917535524594!GO:0006979;response to oxidative stress;0.00201563466368276!GO:0015631;tubulin binding;0.0021699121022222!GO:0016679;oxidoreductase activity, acting on diphenols and related substances as donors;0.00221071498414292!GO:0016681;oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor;0.00221071498414292!GO:0008121;ubiquinol-cytochrome-c reductase activity;0.00221071498414292!GO:0006917;induction of apoptosis;0.00221288161652525!GO:0006383;transcription from RNA polymerase III promoter;0.0022231927660052!GO:0016363;nuclear matrix;0.00223170281907399!GO:0051168;nuclear export;0.00225024828830261!GO:0009165;nucleotide biosynthetic process;0.00225382823434237!GO:0046483;heterocycle metabolic process;0.00225432794317677!GO:0032940;secretion by cell;0.00236368184564872!GO:0019867;outer membrane;0.00251117509899277!GO:0030530;heterogeneous nuclear ribonucleoprotein complex;0.00276931222395729!GO:0008361;regulation of cell size;0.00304961987256611!GO:0005856;cytoskeleton;0.00307742991471416!GO:0000307;cyclin-dependent protein kinase holoenzyme complex;0.00311778775468852!GO:0012502;induction of programmed cell death;0.00315012073982961!GO:0051128;regulation of cellular component organization and biogenesis;0.00315012073982961!GO:0008234;cysteine-type peptidase activity;0.0032132384041989!GO:0016862;intramolecular oxidoreductase activity, interconverting keto- and enol-groups;0.00324353110609884!GO:0006333;chromatin assembly or disassembly;0.00352309617152665!GO:0006614;SRP-dependent cotranslational protein targeting to membrane;0.00354184544501822!GO:0045047;protein targeting to ER;0.00354184544501822!GO:0016563;transcription activator activity;0.0035729729245102!GO:0000785;chromatin;0.00359343547859629!GO:0044433;cytoplasmic vesicle part;0.00359343547859629!GO:0019843;rRNA binding;0.00373753973605349!GO:0003729;mRNA binding;0.0039233441717463!GO:0015405;P-P-bond-hydrolysis-driven transmembrane transporter activity;0.00404461373813479!GO:0015399;primary active transmembrane transporter activity;0.00404461373813479!GO:0016481;negative regulation of transcription;0.00412113356266916!GO:0005786;signal recognition particle, endoplasmic reticulum targeting;0.00418518250810236!GO:0003690;double-stranded DNA binding;0.00427024788559008!GO:0051087;chaperone binding;0.00434155807982413!GO:0006890;retrograde vesicle-mediated transport, Golgi to ER;0.00434249032915776!GO:0006839;mitochondrial transport;0.00438314906483821!GO:0005819;spindle;0.0044799021517727!GO:0016049;cell growth;0.00456959948019707!GO:0051329;interphase of mitotic cell cycle;0.00456959948019707!GO:0030134;ER to Golgi transport vesicle;0.00457968183322259!GO:0030027;lamellipodium;0.00457968183322259!GO:0006626;protein targeting to mitochondrion;0.00461471749519302!GO:0043681;protein import into mitochondrion;0.0049233888961226!GO:0030127;COPII vesicle coat;0.00496348136657674!GO:0012507;ER to Golgi transport vesicle membrane;0.00496348136657674!GO:0044452;nucleolar part;0.00509754431677412!GO:0008312;7S RNA binding;0.00520314233908772!GO:0016765;transferase activity, transferring alkyl or aryl (other than methyl) groups;0.00531510387922344!GO:0012506;vesicle membrane;0.00541256129985703!GO:0006402;mRNA catabolic process;0.00541256129985703!GO:0005741;mitochondrial outer membrane;0.00549764962605433!GO:0007006;mitochondrial membrane organization and biogenesis;0.00577773073879374!GO:0022406;membrane docking;0.00577773073879374!GO:0048278;vesicle docking;0.00577773073879374!GO:0006950;response to stress;0.00593738687411605!GO:0006892;post-Golgi vesicle-mediated transport;0.00602246221871014!GO:0030176;integral to endoplasmic reticulum membrane;0.00612272572620378!GO:0000079;regulation of cyclin-dependent protein kinase activity;0.0062484204650332!GO:0016780;phosphotransferase activity, for other substituted phosphate groups;0.00628544286703832!GO:0050662;coenzyme binding;0.00630048822753329!GO:0030521;androgen receptor signaling pathway;0.00638240327284188!GO:0008139;nuclear localization sequence binding;0.006433810451691!GO:0017166;vinculin binding;0.00644495082395727!GO:0001558;regulation of cell growth;0.00646140658732483!GO:0051101;regulation of DNA binding;0.00646140658732483!GO:0051098;regulation of binding;0.00648063186438985!GO:0015992;proton transport;0.00691500508248374!GO:0016281;eukaryotic translation initiation factor 4F complex;0.00696281547798817!GO:0006357;regulation of transcription from RNA polymerase II promoter;0.00707222240240914!GO:0051336;regulation of hydrolase activity;0.00707222240240914!GO:0007034;vacuolar transport;0.00733909793275667!GO:0051325;interphase;0.007373605606279!GO:0035258;steroid hormone receptor binding;0.00740031974968487!GO:0005874;microtubule;0.00746451585077071!GO:0016408;C-acyltransferase activity;0.00793677712589672!GO:0007050;cell cycle arrest;0.00820457990509011!GO:0006509;membrane protein ectodomain proteolysis;0.00820457990509011!GO:0033619;membrane protein proteolysis;0.00820457990509011!GO:0006904;vesicle docking during exocytosis;0.00826784536125364!GO:0045893;positive regulation of transcription, DNA-dependent;0.00827914829561844!GO:0006818;hydrogen transport;0.00830609071972176!GO:0033673;negative regulation of kinase activity;0.00840012532947273!GO:0006469;negative regulation of protein kinase activity;0.00840012532947273!GO:0045263;proton-transporting ATP synthase complex, coupling factor F(o);0.00842818255187912!GO:0033177;proton-transporting two-sector ATPase complex, proton-transporting domain;0.00842818255187912!GO:0003711;transcription elongation regulator activity;0.00846837611549785!GO:0048487;beta-tubulin binding;0.0086877619930995!GO:0005869;dynactin complex;0.00879583610472322!GO:0016272;prefoldin complex;0.00901181238367795!GO:0000209;protein polyubiquitination;0.00916942757902623!GO:0006414;translational elongation;0.00953358965198885!GO:0006984;ER-nuclear signaling pathway;0.00959962077197286!GO:0008637;apoptotic mitochondrial changes;0.00976493701053075!GO:0005684;U2-dependent spliceosome;0.0097672360875914!GO:0030031;cell projection biogenesis;0.00978173975827066!GO:0043488;regulation of mRNA stability;0.00980281888581065!GO:0043487;regulation of RNA stability;0.00980281888581065!GO:0006417;regulation of translation;0.00983045784226315!GO:0048144;fibroblast proliferation;0.00983045784226315!GO:0048145;regulation of fibroblast proliferation;0.00983045784226315!GO:0048146;positive regulation of fibroblast proliferation;0.010147670691556!GO:0030032;lamellipodium biogenesis;0.0103109533049746!GO:0005774;vacuolar membrane;0.0105471440772248!GO:0008033;tRNA processing;0.0108369380630437!GO:0008601;protein phosphatase type 2A regulator activity;0.010929588705798!GO:0003756;protein disulfide isomerase activity;0.011158965728568!GO:0016864;intramolecular oxidoreductase activity, transposing S-S bonds;0.011158965728568!GO:0050750;low-density lipoprotein receptor binding;0.0112438699156457!GO:0043624;cellular protein complex disassembly;0.0118868466573842!GO:0043281;regulation of caspase activity;0.0119493324411915!GO:0006497;protein amino acid lipidation;0.0125149769623984!GO:0050681;androgen receptor binding;0.0125348254492189!GO:0030880;RNA polymerase complex;0.0128452244964617!GO:0005862;muscle thin filament tropomyosin;0.0129290515744579!GO:0030384;phosphoinositide metabolic process;0.0129290515744579!GO:0051348;negative regulation of transferase activity;0.0129547964667425!GO:0032984;macromolecular complex disassembly;0.0130531720326601!GO:0006302;double-strand break repair;0.0131406902586981!GO:0043154;negative regulation of caspase activity;0.0135839062425405!GO:0006650;glycerophospholipid metabolic process;0.0135846274431189!GO:0005149;interleukin-1 receptor binding;0.0138596871069134!GO:0030833;regulation of actin filament polymerization;0.0139558238253231!GO:0042158;lipoprotein biosynthetic process;0.0139860721916661!GO:0051052;regulation of DNA metabolic process;0.0140198349428603!GO:0008047;enzyme activator activity;0.0140276854122237!GO:0031902;late endosome membrane;0.0143460042365974!GO:0043022;ribosome binding;0.0144056497400078!GO:0016251;general RNA polymerase II transcription factor activity;0.0148177263875696!GO:0006401;RNA catabolic process;0.0153729675471267!GO:0008022;protein C-terminus binding;0.015494514338126!GO:0051540;metal cluster binding;0.0156141221688427!GO:0051536;iron-sulfur cluster binding;0.0156141221688427!GO:0006506;GPI anchor biosynthetic process;0.016083736711729!GO:0006368;RNA elongation from RNA polymerase II promoter;0.0173998096819211!GO:0005832;chaperonin-containing T-complex;0.0176929582338573!GO:0016627;oxidoreductase activity, acting on the CH-CH group of donors;0.0177283949844979!GO:0003857;3-hydroxyacyl-CoA dehydrogenase activity;0.0186295166350053!GO:0007088;regulation of mitosis;0.0191454379879572!GO:0000159;protein phosphatase type 2A complex;0.0191498094124537!GO:0031901;early endosome membrane;0.0192406183211564!GO:0000059;protein import into nucleus, docking;0.0196039873123444!GO:0003684;damaged DNA binding;0.0201392794277737!GO:0045935;positive regulation of nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;0.0202609004631839!GO:0016125;sterol metabolic process;0.0204287888806309!GO:0008180;signalosome;0.020856863681885!GO:0046519;sphingoid metabolic process;0.0211633138319693!GO:0019205;nucleobase, nucleoside, nucleotide kinase activity;0.0213786347270394!GO:0051270;regulation of cell motility;0.021534268443432!GO:0007021;tubulin folding;0.02168335333928!GO:0006518;peptide metabolic process;0.0218275132500903!GO:0000339;RNA cap binding;0.0224265267716621!GO:0006289;nucleotide-excision repair;0.0235578636133289!GO:0007242;intracellular signaling cascade;0.0240026596767925!GO:0006505;GPI anchor metabolic process;0.0240026596767925!GO:0030433;ER-associated protein catabolic process;0.0240026596767925!GO:0006515;misfolded or incompletely synthesized protein catabolic process;0.0240026596767925!GO:0016706;oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;0.0240122078045074!GO:0043241;protein complex disassembly;0.0240643815165369!GO:0045334;clathrin-coated endocytic vesicle;0.0242485043653651!GO:0000049;tRNA binding;0.0244222934775571!GO:0008283;cell proliferation;0.0244222934775571!GO:0055029;nuclear DNA-directed RNA polymerase complex;0.0244222934775571!GO:0000428;DNA-directed RNA polymerase complex;0.0244222934775571!GO:0044437;vacuolar part;0.0253188634567021!GO:0003678;DNA helicase activity;0.0263545916167424!GO:0000075;cell cycle checkpoint;0.0263753672533614!GO:0045936;negative regulation of phosphate metabolic process;0.0264209771571817!GO:0030100;regulation of endocytosis;0.0268667649010049!GO:0001836;release of cytochrome c from mitochondria;0.0272905743366145!GO:0005765;lysosomal membrane;0.0272981025961128!GO:0043161;proteasomal ubiquitin-dependent protein catabolic process;0.0277901653113814!GO:0003779;actin binding;0.0278072645123492!GO:0009112;nucleobase metabolic process;0.0279898077239163!GO:0051493;regulation of cytoskeleton organization and biogenesis;0.028482537642325!GO:0033043;regulation of organelle organization and biogenesis;0.028482537642325!GO:0045941;positive regulation of transcription;0.0289914482136563!GO:0008538;proteasome activator activity;0.0290384146552083!GO:0051272;positive regulation of cell motility;0.0295862556006714!GO:0040017;positive regulation of locomotion;0.0295862556006714!GO:0043492;ATPase activity, coupled to movement of substances;0.0303383933960402!GO:0043284;biopolymer biosynthetic process;0.0303435651694283!GO:0031529;ruffle organization and biogenesis;0.0304810901428355!GO:0006897;endocytosis;0.0308650260489534!GO:0010324;membrane invagination;0.0308650260489534!GO:0031326;regulation of cellular biosynthetic process;0.030998630387973!GO:0009889;regulation of biosynthetic process;0.0315631785381494!GO:0009615;response to virus;0.0316338269478007!GO:0000776;kinetochore;0.031758176302504!GO:0031625;ubiquitin protein ligase binding;0.0319470302026249!GO:0007040;lysosome organization and biogenesis;0.0321715913094953!GO:0007265;Ras protein signal transduction;0.032340752590826!GO:0033559;unsaturated fatty acid metabolic process;0.0327884384867394!GO:0006636;unsaturated fatty acid biosynthetic process;0.0327884384867394!GO:0031371;ubiquitin conjugating enzyme complex;0.0328759875631626!GO:0007030;Golgi organization and biogenesis;0.0334300272080295!GO:0007041;lysosomal transport;0.0336870323887393!GO:0006352;transcription initiation;0.0348823210611629!GO:0022884;macromolecule transmembrane transporter activity;0.0349883540134557!GO:0015450;P-P-bond-hydrolysis-driven protein transmembrane transporter activity;0.0349883540134557!GO:0031575;G1/S transition checkpoint;0.0351954532145772!GO:0033130;acetylcholine receptor binding;0.0352664592509652!GO:0065007;biological regulation;0.0355941502922262!GO:0022890;inorganic cation transmembrane transporter activity;0.0356691782359777!GO:0006611;protein export from nucleus;0.0358269950156267!GO:0035035;histone acetyltransferase binding;0.0359438990060704!GO:0051287;NAD binding;0.0360072289771434!GO:0006778;porphyrin metabolic process;0.0362688448090567!GO:0033013;tetrapyrrole metabolic process;0.0362688448090567!GO:0046426;negative regulation of JAK-STAT cascade;0.0364906210394276!GO:0042626;ATPase activity, coupled to transmembrane movement of substances;0.036910364210986!GO:0032507;maintenance of cellular protein localization;0.0371367369866878!GO:0006643;membrane lipid metabolic process;0.0371367369866878!GO:0008426;protein kinase C inhibitor activity;0.0372684154161115!GO:0006672;ceramide metabolic process;0.0373333894416278!GO:0030330;DNA damage response, signal transduction by p53 class mediator;0.0374770118890324!GO:0006595;polyamine metabolic process;0.0379215721346759!GO:0040012;regulation of locomotion;0.0379607654697238!GO:0040011;locomotion;0.0379755433462099!GO:0016676;oxidoreductase activity, acting on heme group of donors, oxygen as acceptor;0.0380150035828287!GO:0015002;heme-copper terminal oxidase activity;0.0380150035828287!GO:0016675;oxidoreductase activity, acting on heme group of donors;0.0380150035828287!GO:0004129;cytochrome-c oxidase activity;0.0380150035828287!GO:0031124;mRNA 3'-end processing;0.0387198682068333!GO:0044262;cellular carbohydrate metabolic process;0.0393202734747103!GO:0050811;GABA receptor binding;0.0395060660059162!GO:0007004;telomere maintenance via telomerase;0.0395278500440865!GO:0004197;cysteine-type endopeptidase activity;0.0396500396781266!GO:0008299;isoprenoid biosynthetic process;0.0399180363095563!GO:0051338;regulation of transferase activity;0.0399180363095563!GO:0031418;L-ascorbic acid binding;0.0399180363095563!GO:0005669;transcription factor TFIID complex;0.0399180363095563!GO:0030518;steroid hormone receptor signaling pathway;0.0408536694615372!GO:0008320;protein transmembrane transporter activity;0.0410702016261092!GO:0006376;mRNA splice site selection;0.0414576291364894!GO:0000389;nuclear mRNA 3'-splice site recognition;0.0414576291364894!GO:0022411;cellular component disassembly;0.0415656897836614!GO:0030041;actin filament polymerization;0.0416602783140482!GO:0048037;cofactor binding;0.041718736945391!GO:0030145;manganese ion binding;0.041739135985188!GO:0005784;translocon complex;0.0417813369130881!GO:0046822;regulation of nucleocytoplasmic transport;0.0422827309971524!GO:0003988;acetyl-CoA C-acyltransferase activity;0.0433893403444248!GO:0016667;oxidoreductase activity, acting on sulfur group of donors;0.0434441491034544!GO:0040008;regulation of growth;0.0437237798926314!GO:0009116;nucleoside metabolic process;0.044205706487043!GO:0016820;hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances;0.0442732299015526!GO:0000086;G2/M transition of mitotic cell cycle;0.0443355450135486!GO:0019222;regulation of metabolic process;0.0443448863862549!GO:0045892;negative regulation of transcription, DNA-dependent;0.0448961983040173!GO:0006334;nucleosome assembly;0.0449902108564715!GO:0005062;hematopoietin/interferon-class (D200-domain) cytokine receptor signal transducer activity;0.0450696783356117!GO:0000082;G1/S transition of mitotic cell cycle;0.0453243445260063!GO:0001952;regulation of cell-matrix adhesion;0.0455451315666275!GO:0030130;clathrin coat of trans-Golgi network vesicle;0.0455945588152112!GO:0012510;trans-Golgi network transport vesicle membrane;0.0455945588152112!GO:0030140;trans-Golgi network transport vesicle;0.0456604326309637!GO:0007017;microtubule-based process;0.0460649839266394!GO:0004659;prenyltransferase activity;0.0460649839266394!GO:0022408;negative regulation of cell-cell adhesion;0.0468621848923145!GO:0006405;RNA export from nucleus;0.0469221148860716!GO:0043071;positive regulation of non-apoptotic programmed cell death;0.0469482178785788!GO:0042326;negative regulation of phosphorylation;0.0495732795362603!GO:0006354;RNA elongation;0.0495732795362603!GO:0006607;NLS-bearing substrate import into nucleus;0.0496934335377617 | |||
|sample_id=11929 | |sample_id=11929 | ||
|sample_note= | |sample_note= | ||
|sample_sex=female | |sample_sex=female | ||
|sample_species= | |sample_species=Human (Homo sapiens) | ||
|sample_strain= | |sample_strain= | ||
|sample_tissue=ANATOMICAL SYSTEM | |sample_tissue=ANATOMICAL SYSTEM | ||
|top_motifs=TP53:2.80914205801;TBX4,5:2.37828263609;NKX3-2:1.83977568216;TEF:1.8056156966;PAX4:1.42474871389;TEAD1:1.32950532179;PPARG:1.29162178043;ZEB1:1.2079460969;EVI1:1.07788914972;HAND1,2:1.05352844808;SNAI1..3:1.0096940471;ADNP_IRX_SIX_ZHX:1.00730469318;HSF1,2:0.962065096701;NKX2-3_NKX2-5:0.931692381447;NFIX:0.849710768293;TFCP2:0.822556814095;PDX1:0.774959749839;IRF7:0.774540799456;VSX1,2:0.771852435736;HMGA1,2:0.733550085535;ZNF238:0.725084959372;POU3F1..4:0.684043015349;ELK1,4_GABP{A,B1}:0.680527996792;GLI1..3:0.640868577972;FOS_FOS{B,L1}_JUN{B,D}:0.61768667376;FOXN1:0.616506003746;XCPE1{core}:0.590848457105;NR1H4:0.58984081989;NFIL3:0.577800749342;MYOD1:0.570085259105;ZIC1..3:0.564993204052;BACH2:0.554093807044;NANOG:0.54980933477;TLX2:0.543102784506;SP1:0.507536308056;MAZ:0.499318854079;POU1F1:0.497480964413;FOSL2:0.492830266617;ZNF148:0.489631395452;NKX2-2,8:0.474969404948;SOX17:0.47239568965;NKX2-1,4:0.458957378796;UFEwm:0.412289055086;SOX2:0.406238164946;ARID5B:0.402095492683;ONECUT1,2:0.369912029918;KLF4:0.361996900084;SPZ1:0.328589469817;NR3C1:0.320892864771;NKX3-1:0.319304855734;MAFB:0.296351163464;TLX1..3_NFIC{dimer}:0.278495867591;GCM1,2:0.212367680963;SMAD1..7,9:0.206526735337;TBP:0.193048732547;IKZF1:0.191001806378;HOX{A4,D4}:0.178566129575;GFI1B:0.170292605899;LMO2:0.151620043594;ZNF143:0.150467187327;NRF1:0.0831109435566;MYBL2:0.0767720392189;HLF:0.0632680901138;MTF1:0.0487603792357;NFATC1..3:0.0433770504579;TFAP2{A,C}:0.0395966442323;IRF1,2:0.0351926634326;HIF1A:0.0309940614223;LHX3,4:0.012367015289;HMX1:0.00965678572197;GFI1:0.00793873099197;LEF1_TCF7_TCF7L1,2:0.00662569791811;NFE2:-0.00536701622073;STAT1,3:-0.0121255209373;RBPJ:-0.0404028792318;FOXA2:-0.0462090782455;ZBTB6:-0.0599814969446;NFKB1_REL_RELA:-0.0606801066544;ALX1:-0.0767933944241;GTF2A1,2:-0.0791661261148;MTE{core}:-0.0841257166108;POU6F1:-0.0881998866156;OCT4_SOX2{dimer}:-0.102161020932;GZF1:-0.10224680257;PAX1,9:-0.103691722798;RUNX1..3:-0.149448317782;HOX{A5,B5}:-0.151080558409;NFE2L1:-0.166393562317;NHLH1,2:-0.169665478797;JUN:-0.179443026808;RXR{A,B,G}:-0.182157098784;SRF:-0.182677973616;HNF1A:-0.182901363719;REST:-0.188998367319;EBF1:-0.191892571617;PAX2:-0.200766692417;MYFfamily:-0.205825795033;EP300:-0.217303050066;AIRE:-0.222916736785;NFY{A,B,C}:-0.225603880368;CEBPA,B_DDIT3:-0.236601857068;ELF1,2,4:-0.238179792827;FOXO1,3,4:-0.265618698829;FOXP3:-0.278523305933;YY1:-0.280569623918;EN1,2:-0.282341975805;RXRA_VDR{dimer}:-0.29063432527;ATF5_CREB3:-0.297855364751;ALX4:-0.307930867341;AR:-0.327027826859;GTF2I:-0.334680496278;PAX5:-0.346334594414;ETS1,2:-0.347400149546;SPI1:-0.353687831599;FOXM1:-0.355360832816;ZFP161:-0.372358246491;ATF6:-0.380758415745;SPIB:-0.388748993198;RFX1:-0.389367554348;CDC5L:-0.391395988842;SOX{8,9,10}:-0.393017979835;PRDM1:-0.399362477065;FOX{I1,J2}:-0.413860727888;bHLH_family:-0.419662416574;ZNF384:-0.425052574122;ATF4:-0.428449311397;GATA6:-0.430990432789;TAL1_TCF{3,4,12}:-0.444325025186;NFE2L2:-0.458788482738;NR6A1:-0.475052191855;MED-1{core}:-0.493115749526;STAT5{A,B}:-0.534844581828;TFDP1:-0.546664201709;ATF2:-0.54973663009;RFX2..5_RFXANK_RFXAP:-0.564611727485;SREBF1,2:-0.566457217796;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.579517148813;TFAP2B:-0.581077451243;MYB:-0.593459465672;CDX1,2,4:-0.600061799407;E2F1..5:-0.601144111604;HES1:-0.60243618655;NANOG{mouse}:-0.613038751154;PITX1..3:-0.625234094834;CRX:-0.626570959838;FOX{F1,F2,J1}:-0.630400618716;T:-0.642750093683;BPTF:-0.645015547673;PAX8:-0.651268749566;DBP:-0.653761234484;HNF4A_NR2F1,2:-0.65501186595;MEF2{A,B,C,D}:-0.66865284772;HOX{A6,A7,B6,B7}:-0.669812604809;HIC1:-0.67036758808;PRRX1,2:-0.678756579127;CUX2:-0.683395903917;MZF1:-0.685550370467;TGIF1:-0.685564841147;TOPORS:-0.695497558855;GATA4:-0.699164115858;TFAP4:-0.709772026407;ZBTB16:-0.720096450582;FOXL1:-0.765471945303;FOX{D1,D2}:-0.780902778132;CREB1:-0.795558033029;NR5A1,2:-0.810735708063;ZNF423:-0.835302069919;HOXA9_MEIS1:-0.855197887328;AHR_ARNT_ARNT2:-0.921401745221;RREB1:-0.932233602466;NKX6-1,2:-0.957427067188;ESR1:-0.969674772952;EGR1..3:-1.00529612903;STAT2,4,6:-1.03315898787;POU5F1:-1.04912495156;DMAP1_NCOR{1,2}_SMARC:-1.0609928452;FOXQ1:-1.13269105643;HBP1_HMGB_SSRP1_UBTF:-1.14894890924;POU2F1..3:-1.18473518621;PAX6:-1.1870195198;SOX5:-1.20169424821;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.28192428365;XBP1:-1.30802327431;PATZ1:-1.33134049433;FOXP1:-1.35341928318;PBX1:-1.35427625133;RORA:-1.35882596649;PAX3,7:-1.41695041239;ESRRA:-1.45805746596;BREu{core}:-1.58436443353;IKZF2:-1.6215430053;FOXD3:-1.76408328813 | |top_motifs=TP53:2.80914205801;TBX4,5:2.37828263609;NKX3-2:1.83977568216;TEF:1.8056156966;PAX4:1.42474871389;TEAD1:1.32950532179;PPARG:1.29162178043;ZEB1:1.2079460969;EVI1:1.07788914972;HAND1,2:1.05352844808;SNAI1..3:1.0096940471;ADNP_IRX_SIX_ZHX:1.00730469318;HSF1,2:0.962065096701;NKX2-3_NKX2-5:0.931692381447;NFIX:0.849710768293;TFCP2:0.822556814095;PDX1:0.774959749839;IRF7:0.774540799456;VSX1,2:0.771852435736;HMGA1,2:0.733550085535;ZNF238:0.725084959372;POU3F1..4:0.684043015349;ELK1,4_GABP{A,B1}:0.680527996792;GLI1..3:0.640868577972;FOS_FOS{B,L1}_JUN{B,D}:0.61768667376;FOXN1:0.616506003746;XCPE1{core}:0.590848457105;NR1H4:0.58984081989;NFIL3:0.577800749342;MYOD1:0.570085259105;ZIC1..3:0.564993204052;BACH2:0.554093807044;NANOG:0.54980933477;TLX2:0.543102784506;SP1:0.507536308056;MAZ:0.499318854079;POU1F1:0.497480964413;FOSL2:0.492830266617;ZNF148:0.489631395452;NKX2-2,8:0.474969404948;SOX17:0.47239568965;NKX2-1,4:0.458957378796;UFEwm:0.412289055086;SOX2:0.406238164946;ARID5B:0.402095492683;ONECUT1,2:0.369912029918;KLF4:0.361996900084;SPZ1:0.328589469817;NR3C1:0.320892864771;NKX3-1:0.319304855734;MAFB:0.296351163464;TLX1..3_NFIC{dimer}:0.278495867591;GCM1,2:0.212367680963;SMAD1..7,9:0.206526735337;TBP:0.193048732547;IKZF1:0.191001806378;HOX{A4,D4}:0.178566129575;GFI1B:0.170292605899;LMO2:0.151620043594;ZNF143:0.150467187327;NRF1:0.0831109435566;MYBL2:0.0767720392189;HLF:0.0632680901138;MTF1:0.0487603792357;NFATC1..3:0.0433770504579;TFAP2{A,C}:0.0395966442323;IRF1,2:0.0351926634326;HIF1A:0.0309940614223;LHX3,4:0.012367015289;HMX1:0.00965678572197;GFI1:0.00793873099197;LEF1_TCF7_TCF7L1,2:0.00662569791811;NFE2:-0.00536701622073;STAT1,3:-0.0121255209373;RBPJ:-0.0404028792318;FOXA2:-0.0462090782455;ZBTB6:-0.0599814969446;NFKB1_REL_RELA:-0.0606801066544;ALX1:-0.0767933944241;GTF2A1,2:-0.0791661261148;MTE{core}:-0.0841257166108;POU6F1:-0.0881998866156;OCT4_SOX2{dimer}:-0.102161020932;GZF1:-0.10224680257;PAX1,9:-0.103691722798;RUNX1..3:-0.149448317782;HOX{A5,B5}:-0.151080558409;NFE2L1:-0.166393562317;NHLH1,2:-0.169665478797;JUN:-0.179443026808;RXR{A,B,G}:-0.182157098784;SRF:-0.182677973616;HNF1A:-0.182901363719;REST:-0.188998367319;EBF1:-0.191892571617;PAX2:-0.200766692417;MYFfamily:-0.205825795033;EP300:-0.217303050066;AIRE:-0.222916736785;NFY{A,B,C}:-0.225603880368;CEBPA,B_DDIT3:-0.236601857068;ELF1,2,4:-0.238179792827;FOXO1,3,4:-0.265618698829;FOXP3:-0.278523305933;YY1:-0.280569623918;EN1,2:-0.282341975805;RXRA_VDR{dimer}:-0.29063432527;ATF5_CREB3:-0.297855364751;ALX4:-0.307930867341;AR:-0.327027826859;GTF2I:-0.334680496278;PAX5:-0.346334594414;ETS1,2:-0.347400149546;SPI1:-0.353687831599;FOXM1:-0.355360832816;ZFP161:-0.372358246491;ATF6:-0.380758415745;SPIB:-0.388748993198;RFX1:-0.389367554348;CDC5L:-0.391395988842;SOX{8,9,10}:-0.393017979835;PRDM1:-0.399362477065;FOX{I1,J2}:-0.413860727888;bHLH_family:-0.419662416574;ZNF384:-0.425052574122;ATF4:-0.428449311397;GATA6:-0.430990432789;TAL1_TCF{3,4,12}:-0.444325025186;NFE2L2:-0.458788482738;NR6A1:-0.475052191855;MED-1{core}:-0.493115749526;STAT5{A,B}:-0.534844581828;TFDP1:-0.546664201709;ATF2:-0.54973663009;RFX2..5_RFXANK_RFXAP:-0.564611727485;SREBF1,2:-0.566457217796;RXR{A,B,G}_{NR1H2,PPAR}dimers:-0.579517148813;TFAP2B:-0.581077451243;MYB:-0.593459465672;CDX1,2,4:-0.600061799407;E2F1..5:-0.601144111604;HES1:-0.60243618655;NANOG{mouse}:-0.613038751154;PITX1..3:-0.625234094834;CRX:-0.626570959838;FOX{F1,F2,J1}:-0.630400618716;T:-0.642750093683;BPTF:-0.645015547673;PAX8:-0.651268749566;DBP:-0.653761234484;HNF4A_NR2F1,2:-0.65501186595;MEF2{A,B,C,D}:-0.66865284772;HOX{A6,A7,B6,B7}:-0.669812604809;HIC1:-0.67036758808;PRRX1,2:-0.678756579127;CUX2:-0.683395903917;MZF1:-0.685550370467;TGIF1:-0.685564841147;TOPORS:-0.695497558855;GATA4:-0.699164115858;TFAP4:-0.709772026407;ZBTB16:-0.720096450582;FOXL1:-0.765471945303;FOX{D1,D2}:-0.780902778132;CREB1:-0.795558033029;NR5A1,2:-0.810735708063;ZNF423:-0.835302069919;HOXA9_MEIS1:-0.855197887328;AHR_ARNT_ARNT2:-0.921401745221;RREB1:-0.932233602466;NKX6-1,2:-0.957427067188;ESR1:-0.969674772952;EGR1..3:-1.00529612903;STAT2,4,6:-1.03315898787;POU5F1:-1.04912495156;DMAP1_NCOR{1,2}_SMARC:-1.0609928452;FOXQ1:-1.13269105643;HBP1_HMGB_SSRP1_UBTF:-1.14894890924;POU2F1..3:-1.18473518621;PAX6:-1.1870195198;SOX5:-1.20169424821;ARNT_ARNT2_BHLHB2_MAX_MYC_USF1:-1.28192428365;XBP1:-1.30802327431;PATZ1:-1.33134049433;FOXP1:-1.35341928318;PBX1:-1.35427625133;RORA:-1.35882596649;PAX3,7:-1.41695041239;ESRRA:-1.45805746596;BREu{core}:-1.58436443353;IKZF2:-1.6215430053;FOXD3:-1.76408328813 | ||
|xref= | |||
}} | }} | ||
Revision as of 21:31, 10 August 2017
| Name: | Mallassez-derived cells, donor2 |
|---|---|
| Species: | Human (Homo sapiens) |
| Library ID: | CNhs13550 |
| Sample type: | primary cells |
| Genomic View: | UCSC |
| RefEX: | Specific genes |
| FANTOM CAT: | 1, 2, 3, 4, 5, 6, 7, 8, 9, 10 |
| CAGEd-oPOSSUM: | link |
| Additional information | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Sample information
RNA information
|
| CAGE Accession numbers | ||||||||||||||||||||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
| Download raw sequence, BAM & CTSS | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
Relative expression to median (log10)
Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.
Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. <br>Analyst:NA <br><br>link to dataset.<br>data
Repeat families with enriched expression in this sample<b>Summary:</b>Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed.<br><b>Analyst:</b>NA<br><br>link to dataset.<br>data
TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample
JASPAR motifs<b>Summary:</b>Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13550
FANTOM5 phase1 novel unique motifs<b>Summary:</b>Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above<br><b>Analyst:</b> Michiel de Hoon <br><br><br>link to dataset.<br>data
library id: CNhs13550
| Novel motif | Logo | P-value |
|---|---|---|
| 1 | 1 | 0.911 |
| 10 | 10 | 0.281 |
| 100 | 100 | 0.351 |
| 101 | 101 | 0.327 |
| 102 | 102 | 0.704 |
| 103 | 103 | 0.0162 |
| 104 | 104 | 0.978 |
| 105 | 105 | 0.518 |
| 106 | 106 | 0.475 |
| 107 | 107 | 0.241 |
| 108 | 108 | 0.605 |
| 109 | 109 | 0.031 |
| 11 | 11 | 0.765 |
| 110 | 110 | 0.488 |
| 111 | 111 | 0.269 |
| 112 | 112 | 0.122 |
| 113 | 113 | 0.261 |
| 114 | 114 | 0.0518 |
| 115 | 115 | 0.925 |
| 116 | 116 | 0.727 |
| 117 | 117 | 0.288 |
| 118 | 118 | 0.724 |
| 119 | 119 | 0.967 |
| 12 | 12 | 0.831 |
| 120 | 120 | 0.0345 |
| 121 | 121 | 0.302 |
| 122 | 122 | 0.45 |
| 123 | 123 | 0.0356 |
| 124 | 124 | 0.0302 |
| 125 | 125 | 0.965 |
| 126 | 126 | 0.246 |
| 127 | 127 | 0.131 |
| 128 | 128 | 0.966 |
| 129 | 129 | 0.229 |
| 13 | 13 | 0.0458 |
| 130 | 130 | 0.676 |
| 131 | 131 | 0.306 |
| 132 | 132 | 0.851 |
| 133 | 133 | 0.0864 |
| 134 | 134 | 0.34 |
| 135 | 135 | 0.693 |
| 136 | 136 | 0.0609 |
| 137 | 137 | 0.184 |
| 138 | 138 | 0.552 |
| 139 | 139 | 0.859 |
| 14 | 14 | 0.849 |
| 140 | 140 | 0.547 |
| 141 | 141 | 0.731 |
| 142 | 142 | 0.87 |
| 143 | 143 | 0.747 |
| 144 | 144 | 0.561 |
| 145 | 145 | 0.282 |
| 146 | 146 | 0.15 |
| 147 | 147 | 0.519 |
| 148 | 148 | 0.367 |
| 149 | 149 | 0.798 |
| 15 | 15 | 0.745 |
| 150 | 150 | 0.129 |
| 151 | 151 | 0.52 |
| 152 | 152 | 0.0072 |
| 153 | 153 | 0.726 |
| 154 | 154 | 0.748 |
| 155 | 155 | 0.851 |
| 156 | 156 | 0.538 |
| 157 | 157 | 0.287 |
| 158 | 158 | 0.106 |
| 159 | 159 | 0.819 |
| 16 | 16 | 0.075 |
| 160 | 160 | 0.663 |
| 161 | 161 | 0.956 |
| 162 | 162 | 0.877 |
| 163 | 163 | 0.873 |
| 164 | 164 | 0.899 |
| 165 | 165 | 0.239 |
| 166 | 166 | 0.95 |
| 167 | 167 | 0.321 |
| 168 | 168 | 0.0934 |
| 169 | 169 | 0.0957 |
| 17 | 17 | 0.466 |
| 18 | 18 | 0.253 |
| 19 | 19 | 0.989 |
| 2 | 2 | 0.223 |
| 20 | 20 | 0.796 |
| 21 | 21 | 0.583 |
| 22 | 22 | 0.703 |
| 23 | 23 | 0.211 |
| 24 | 24 | 0.0106 |
| 25 | 25 | 0.687 |
| 26 | 26 | 0.799 |
| 27 | 27 | 0.676 |
| 28 | 28 | 0.303 |
| 29 | 29 | 0.699 |
| 3 | 3 | 0.919 |
| 30 | 30 | 0.0434 |
| 31 | 31 | 0.943 |
| 32 | 32 | 0.763 |
| 33 | 33 | 0.074 |
| 34 | 34 | 0.401 |
| 35 | 35 | 0.0358 |
| 36 | 36 | 0.232 |
| 37 | 37 | 0.0893 |
| 38 | 38 | 0.706 |
| 39 | 39 | 0.391 |
| 4 | 4 | 0.42 |
| 40 | 40 | 0.0883 |
| 41 | 41 | 0.509 |
| 42 | 42 | 0.868 |
| 43 | 43 | 0.73 |
| 44 | 44 | 0.345 |
| 45 | 45 | 0.0457 |
| 46 | 46 | 0.979 |
| 47 | 47 | 0.469 |
| 48 | 48 | 0.187 |
| 49 | 49 | 0.307 |
| 5 | 5 | 0.863 |
| 50 | 50 | 0.634 |
| 51 | 51 | 0.94 |
| 52 | 52 | 0.136 |
| 53 | 53 | 0.228 |
| 54 | 54 | 0.62 |
| 55 | 55 | 0.133 |
| 56 | 56 | 0.333 |
| 57 | 57 | 0.593 |
| 58 | 58 | 0.968 |
| 59 | 59 | 0.517 |
| 6 | 6 | 0.524 |
| 60 | 60 | 0.255 |
| 61 | 61 | 0.266 |
| 62 | 62 | 0.891 |
| 63 | 63 | 0.345 |
| 64 | 64 | 0.78 |
| 65 | 65 | 0.88 |
| 66 | 66 | 0.441 |
| 67 | 67 | 0.675 |
| 68 | 68 | 0.357 |
| 69 | 69 | 0.384 |
| 7 | 7 | 0.519 |
| 70 | 70 | 0.134 |
| 71 | 71 | 0.496 |
| 72 | 72 | 0.845 |
| 73 | 73 | 0.00204 |
| 74 | 74 | 0.0941 |
| 75 | 75 | 0.439 |
| 76 | 76 | 0.852 |
| 77 | 77 | 0.0972 |
| 78 | 78 | 0.0132 |
| 79 | 79 | 0.613 |
| 8 | 8 | 0.841 |
| 80 | 80 | 0.978 |
| 81 | 81 | 0.205 |
| 82 | 82 | 0.803 |
| 83 | 83 | 0.308 |
| 84 | 84 | 0.113 |
| 85 | 85 | 0.704 |
| 86 | 86 | 0.772 |
| 87 | 87 | 0.00852 |
| 88 | 88 | 0.855 |
| 89 | 89 | 0.0318 |
| 9 | 9 | 0.725 |
| 90 | 90 | 0.258 |
| 91 | 91 | 0.751 |
| 92 | 92 | 0.592 |
| 93 | 93 | 0.152 |
| 94 | 94 | 0.883 |
| 95 | 95 | 0.121 |
| 96 | 96 | 0.866 |
| 97 | 97 | 0.393 |
| 98 | 98 | 0.415 |
| 99 | 99 | 0.207 |
de novo motifs identified by HOMER in promoters active in this sample<b>Summary:</b>The result of HOMER in this sample is shown.<br><b>Analyst:</b>NA <br>
library id: CNhs13550
FANTOM5 (FF) ontology
Direct parent terms
is_a relathionship
EFO:0002091 biological replicate
FF:0000087 human Malassez derived epithelial cell sample
Ancestor terms (non development)<b>Summary:</b>Connected ontology terms with is_a, part_of or located_in relationship <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source data<br>data
CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0000066 (epithelial cell)
0002371 (somatic cell)
0002159 (general ecto-epithelial cell)
0000255 (eukaryotic cell)
0002077 (ecto-epithelial cell)
0002166 (epithelial cell of Malassez)
UBERON: Anatomy
0000468 (multi-cellular organism)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000477 (anatomical cluster)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0000075 (subdivision of skeletal system)
0004765 (skeletal element)
0001708 (jaw skeleton)
0011159 (primary subdivision of cranial skeletal system)
0002204 (musculoskeletal system)
0001434 (skeletal system)
0008895 (splanchnocranium)
0011137 (axial skeletal system)
0010323 (cranial skeletal system)
FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000087 (human Malassez derived epithelial cell sample)
Ancestor terms (development)<b>Summary:</b>Connected ontology terms with develops_from, derives_from or preceded_by relationship <br><b>Analyst:</b> Hideya Kawaji <br><br>link to source data<br>data
CL:0000221 (ectodermal cell)
