NonredundantMotifs:178: Difference between revisions
From FANTOM5_SSTAR
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|entrez_gene_id=7849
|motif_cluster_2013_march_motif_members= /HOCOMOCO:PAX8_f1
|name=known178
|representative_motif_db=HOCOMOCO
|representative_motif_id=P...") |
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{{Known_motif | {{Known_motif | ||
|PWM=P0;A;C;G;T!1;4.2923940149626025;7.8273067331671;14.672693266832917;10.127805486284279!2;3.0299251870324215;8.24812967581048;3.534912718204489;22.107231920199496!3;9.089775561097277;14.0274314214464;11.783042394014977;2.0199501246882803!4;30.748129675810496;2.5810473815461337;2.0199501246882803;1.5710723192019957!5;5.049875311720709;16.608478802992508;0.0;15.261845386533679!6;2.524937655860351;5.89152119700747;1.5710723192019957;26.93266832917707!7;3.1421446384039915;16.15960099750623;16.608478802992508;1.009975062344142!8;17.169576059850375;2.1321695760598494;14.476309226932676;3.1421446384039915!9;15.822942643391507;12.119700748129667;4.937655860349122;4.039900249376568!10;1.009975062344142;8.304239401496273;25.081047381546163;2.524937655860351!11;5.274314214463847;19.526184538653382;0.0;12.119700748129667!12;14.364089775561087;4.039900249376568;18.516209476309246;0.0!13;0.0;3.591022443890276;16.832917705735646;16.49625935162096!14;12.708852867830426;2.0480049875311734;16.07543640897758;6.087905236907748 | |||
|entrez_gene_id=7849 | |entrez_gene_id=7849 | ||
|motif_cluster_2013_march_motif_members= /HOCOMOCO:PAX8_f1 | |motif_cluster_2013_march_motif_members= /HOCOMOCO:PAX8_f1 | ||
|name= | |name=non-redundant178 | ||
|representative_motif_db=HOCOMOCO | |representative_motif_db=HOCOMOCO | ||
|representative_motif_id=PAX8_f1 | |representative_motif_id=PAX8_f1 | ||
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[[Category:Motif]] | [[Category:Motif]] | ||
[[Category:MotifCluster2013March]] | [[Category:MotifCluster2013March]] | ||
[[Category:NonRedundantMotifCluster]] | |||
Latest revision as of 10:22, 30 May 2013
Representative Motif
<br>Analyst: Ivan Kulakovskiy,Ilya Vorontsov, Vsevolod Makeev, Michiel de Hoon <br>May 2013, Collection Name: Non-redundant known motifs<br>Analysis information: 208 clusters of known motifs were produced by MACRO-APE [1] using the general phase1 motif clustering procedure applied for known motif collections.<br>207 of 208 clusters had at least one member passing motif-promoter correlation procedure.For these clusters representative motifs were selected based on motif-promoter correlation values.For each cluster only motifs with an average distance to of ther members not greater than mean+SD were considered as representatives.
- Name :non-redundant178
- db :HOCOMOCO
- Id :PAX8_f1
- name :
- score :0.14282671296680755
- External refs:
- Internal refs:
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Sub Motif Members
