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Difference between revisions of "Template:F5samples"

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(Parent Ontologies)
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|-
 
|-
 
! [[Property:name|name]]
 
! [[Property:name|name]]
| [[name::{{{name}}}]]
+
| [[name::{{{name}}}]]{{#set:nametest={{{name}}}}}
 
|-
 
|-
 
! [[Property:sample_species|species]]
 
! [[Property:sample_species|species]]
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{{#arraymap:{{{ancestors_in_disease_facet|}}}|,|x|{{#set:ancestors_in_disease_facet=x}}}}
 
{{#arraymap:{{{ancestors_in_disease_facet|}}}|,|x|{{#set:ancestors_in_disease_facet=x}}}}
 
{{#arraymap:{{{ancestors_in_anatomy_facet|}}}|,|x|{{#set:ancestors_in_anatomy_facet=x}}}}
 
{{#arraymap:{{{ancestors_in_anatomy_facet|}}}|,|x|{{#set:ancestors_in_anatomy_facet=x}}}}
 
 
 
 
  
  

Revision as of 08:26, 25 January 2012

{{{id}}}
name {{{name}}}Property "Nametest" (as page type) with input value "{{{name}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
species {{{sample_species}}}
hCAGE {{{profile_hcage}}}
RNA-seq {{{profile_rnaseq}}}
smallRNA seq {{{profile_srnaseq}}}
nanoCAGEscan {{{profile_cagescan}}}
sample detail
strain {{{sample_strain}}}
tissue {{{sample_tissue}}}
dev_stage {{{sample_dev_stage}}}
sex {{{sample_sex}}}
age {{{sample_age}}}
ethnicity {{{sample_ethnicity}}}
cell_type {{{sample_cell_type}}}
cell_line {{{sample_cell_line}}}
collaboration {{{sample_collaboration}}}
Experimental condition {{{sample_experimental_condition}}}
disease {{{sample_disease}}}
cell_lot {{{sample_cell_lot}}}
cell_catalog {{{sample_cell_catalog}}}
company {{{sample_company}}}
donor(cell lot) {{{sample_donor(cell lot)}}}
Note {{{sample_note}}}
RNA info
sample_id {{{sample_id}}}
tube_id {{{rna_tube_id}}}
box {{{rna_box}}}
position {{{rna_position}}}
lot_number {{{rna_lot_number}}}
catalog_number {{{rna_catalog_number}}}
RIN {{{rna_rin}}}
OD260/230 {{{rna_od260/230}}}
OD260/280 {{{rna_od260/280}}}
sample_type {{{rna_sample_type}}}
extraction_protocol {{{rna_extraction_protocol}}}
weight_ug {{{rna_weight_ug}}}
concentration {{{rna_concentration}}}


{{{name}}}. Its transcriptome profile can be found in Genome Browsers ( zenbu and UCSC )



Specific TFs

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Specific genes

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Specific TSS regions

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Specific motifs

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De-novo motifs

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Parent Ontologies