UBERON:0000166: Difference between revisions
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{{UBERON | {{UBERON | ||
| | |alt_id= | ||
|anatomical_img_id=FMA:59806 | |||
| | |||
|comment=note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate. | |comment=note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate. | ||
|created_by= | |created_by= | ||
| | |def="The opening of the head through which food passes into the body." [NLM:mouth] | ||
|derives_from= | |derives_from= | ||
|develops_from= | |develops_from= | ||
|disjoint_from= | |||
|has_quality= | |has_quality= | ||
|id=UBERON:0000166 | |||
|is_a=UBERON:0000161 ;;UBERON:0004121 | |||
|is_obsolete= | |||
|located_in= | |located_in= | ||
|part_of= | |name=oral opening | ||
|namespace=FANTOM | |||
|obo_creation_date= | |||
|part_of=UBERON:0000165 | |||
|preceded_by= | |||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
| | |subset=uberon_slim;;vertebrate_core | ||
| | |synonym="adult mouth" RELATED [];;"mouth" RELATED [];;"oral fissure" EXACT [FMA:59806];;"oral orifice" EXACT [FMA:59806];;"oral part of face" EXACT [];;"oral region" EXACT [];;"orofacial cavity" RELATED [];;"subdivision of mouth" EXACT [] | ||
|union_of= | |||
|xref=BTO:0004698;;EHDAA2:0001326;;EHDAA:542;;EMAPA:16262;;FMA:59806;;MA:0000341;;TAO:0000590;;TGMA:0000131;;VHOG:0000280;;ZFA:0000590 | |||
}} | }} | ||
Latest revision as of 17:07, 12 September 2014
| Name: | oral opening | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "The opening of the head through which food passes into the body." [NLM:mouth] | ||
| Xrefs: |
| ||
| Synonyms: |
"adult mouth" RELATED [] "mouth" RELATED [] "oral fissure" EXACT [FMA:59806] "oral orifice" EXACT [FMA:59806] "oral part of face" EXACT [] "oral region" EXACT [] "orofacial cavity" RELATED [] "subdivision of mouth" EXACT [] | ||
| Comments: | note MA includes as parts of 'oral region' the tongue, tonsils, etc, so an equivalence to the oral opening itself may not be appropriate. | ||
| Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000161(orifice),UBERON:0004121(ectoderm-derived structure) |
|---|---|
| part_of: | UBERON:0000165(mouth) |
Children
| part of: | UBERON:0003293 (gland of oral region),UBERON:0003343 (mucosa of oral region) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10047-101G2 (tonsil, adult, pool1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10512-107D8
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
- 10545-107H5 (oral squamous cell carcinoma cell line:HSC-3)
... further results Mouse (Mus musculus)
- 10047-101G2 (tonsil, adult, pool1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 10434-106E2 (oral squamous cell carcinoma cell line:Ca9-22)
- 10512-107D8
- 10532-107G1
- 10537-107G6
- 10544-107H4 (oral squamous cell carcinoma cell line:SAS)
- 10545-107H5 (oral squamous cell carcinoma cell line:HSC-3)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000166 (oral opening), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:91729805..91729815,+#_15726e5db4740bf26e73cba11983535f | p@chr15:91729805..91729815, + |
| 1.87e-86 | FFCP PHASE2:Mm9::chr12:57793900..57793908,-#_15726e5db4740bf26e73cba11983535f | p@chr12:57793900..57793908, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr12:57793900..57793908,-#_15726e5db4740bf26e73cba11983535f | p@chr12:57793900..57793908, - |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:91668686..91668696,+#_15726e5db4740bf26e73cba11983535f | p2@Smgc |
| 1.87e-86 | FFCP PHASE2:Mm9::chr15:91668686..91668696,+#_15726e5db4740bf26e73cba11983535f | p2@Smgc |
| 1.87e-86 | FFCP PHASE1:Mm9::chr15:91729805..91729815,+#_15726e5db4740bf26e73cba11983535f | p@chr15:91729805..91729815, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr10:28755265..28755269,-#_3a863416c1f8df4a5538a5192224c8cd | p@chr10:28755265..28755269, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr7:51271323..51271366,+#_3a863416c1f8df4a5538a5192224c8cd | p@chr7:51271323..51271366, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr6:60435965..60435986,+#_3a863416c1f8df4a5538a5192224c8cd | p@chr6:60435965..60435986, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr10:28755265..28755269,-#_3a863416c1f8df4a5538a5192224c8cd | p@chr10:28755265..28755269, - |
| 1.68e-58 | FFCP PHASE1:Mm9::chr1:52741574..52741579,+#_3a863416c1f8df4a5538a5192224c8cd | p@chr1:52741574..52741579, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr1:52741574..52741579,+#_3a863416c1f8df4a5538a5192224c8cd | p@chr1:52741574..52741579, + |
| 1.68e-58 | FFCP PHASE1:Mm9::chr6:60435965..60435986,+#_3a863416c1f8df4a5538a5192224c8cd | p@chr6:60435965..60435986, + |
| 1.68e-58 | FFCP PHASE2:Mm9::chr7:51271323..51271366,+#_3a863416c1f8df4a5538a5192224c8cd | p@chr7:51271323..51271366, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:153840649..153840658,+#_8701fa0e26235d8b2cdc77a700336c70 | p8@Bpifa2e |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:153840649..153840658,+#_8701fa0e26235d8b2cdc77a700336c70 | p8@Bpifa2e |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:153837176..153837187,+#_8701fa0e26235d8b2cdc77a700336c70 | p@chr2:153837176..153837187, + |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:153837176..153837187,+#_8701fa0e26235d8b2cdc77a700336c70 | p@chr2:153837176..153837187, + |
| 3.28e-58 | FFCP PHASE2:Mm9::chr10:28693770..28693774,-#_8701fa0e26235d8b2cdc77a700336c70 | p5@2310057J18Rik |
| 3.28e-58 | FFCP PHASE2:Mm9::chr2:153839410..153839423,+#_8701fa0e26235d8b2cdc77a700336c70 | p6@Bpifa2e |
| 3.28e-58 | FFCP PHASE2:Mm9::chr6:132314147..132314153,-#_8701fa0e26235d8b2cdc77a700336c70 | p1@Gm4736, p1@Gm8882 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr6:132314147..132314153,-#_8701fa0e26235d8b2cdc77a700336c70 | p1@Gm4736, p1@Gm8882 |
| 3.28e-58 | FFCP PHASE1:Mm9::chr10:28693770..28693774,-#_8701fa0e26235d8b2cdc77a700336c70 | p5@2310057J18Rik |
| 3.28e-58 | FFCP PHASE1:Mm9::chr2:153839410..153839423,+#_8701fa0e26235d8b2cdc77a700336c70 | p6@Bpifa2e |
| 3.37e-46 | FFCP PHASE2:Hg19::chr16:2882120..2882124,+#_737698c35e6c34f6566c9b51a941dfd6 | p@chr16:2882120..2882124, + |
| 3.37e-46 | FFCP PHASE1:Hg19::chr16:2882120..2882124,+#_737698c35e6c34f6566c9b51a941dfd6 | p@chr16:2882120..2882124, + |
| 5.45e-46 | FFCP PHASE2:Hg19::chr14:37126765..37126799,+#_c4ccc2789cf13d86c2ad56bfc4ce60fc | p2@PAX9 |
| 5.45e-46 | FFCP PHASE1:Hg19::chr14:37126765..37126799,+#_c4ccc2789cf13d86c2ad56bfc4ce60fc | p2@PAX9 |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:71347264..71347292,-#_9e330da49be797de35a38280dedd52bf | p2@CU693013 |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:71339736..71339746,+#_9e330da49be797de35a38280dedd52bf | p14@MUC7 |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:71347643..71347654,+#_9e330da49be797de35a38280dedd52bf | p@chr4:71347643..71347654, + |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:71347643..71347654,+#_9e330da49be797de35a38280dedd52bf | p@chr4:71347643..71347654, + |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:71347264..71347292,-#_9e330da49be797de35a38280dedd52bf | p2@CU693013 |
| 3.09e-45 | FFCP PHASE2:Hg19::chr16:2880736..2880751,+#_9e330da49be797de35a38280dedd52bf | p@chr16:2880736..2880751, + |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:71346691..71346709,-#_9e330da49be797de35a38280dedd52bf | p@chr4:71346691..71346709, - |
| 3.09e-45 | FFCP PHASE1:Hg19::chr16:2880736..2880751,+#_9e330da49be797de35a38280dedd52bf | p@chr16:2880736..2880751, + |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:71347478..71347512,-#_9e330da49be797de35a38280dedd52bf | p1@CU693013 |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:71347478..71347512,-#_9e330da49be797de35a38280dedd52bf | p1@CU693013 |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:71346691..71346709,-#_9e330da49be797de35a38280dedd52bf | p@chr4:71346691..71346709, - |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:71346609..71346620,+#_9e330da49be797de35a38280dedd52bf | p1@BX648904 |
| 3.09e-45 | FFCP PHASE2:Hg19::chr16:2880755..2880772,-#_9e330da49be797de35a38280dedd52bf | p@chr16:2880755..2880772, - |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:189860069..189860075,+#_9e330da49be797de35a38280dedd52bf | p@chr4:189860069..189860075, + |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:189860069..189860075,+#_9e330da49be797de35a38280dedd52bf | p@chr4:189860069..189860075, + |
| 3.09e-45 | FFCP PHASE1:Hg19::chr16:2880755..2880772,-#_9e330da49be797de35a38280dedd52bf | p@chr16:2880755..2880772, - |
| 3.09e-45 | FFCP PHASE2:Hg19::chr4:71339736..71339746,+#_9e330da49be797de35a38280dedd52bf | p14@MUC7 |
| 3.09e-45 | FFCP PHASE1:Hg19::chr4:71346609..71346620,+#_9e330da49be797de35a38280dedd52bf | p1@BX648904 |
| 1.66e-44 | FFCP PHASE1:Mm9::chr15:91736964..91737001,+#_8d9bce60b61ce45fd89e02f1a9646e6b | p@chr15:91736964..91737001, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr15:91736964..91737001,+#_8d9bce60b61ce45fd89e02f1a9646e6b | p@chr15:91736964..91737001, + |
| 1.66e-44 | FFCP PHASE2:Mm9::chr10:28706137..28706150,-#_8d9bce60b61ce45fd89e02f1a9646e6b | p3@2310057J18Rik |
| 1.66e-44 | FFCP PHASE1:Mm9::chr10:28706137..28706150,-#_8d9bce60b61ce45fd89e02f1a9646e6b | p3@2310057J18Rik |
| 2.75e-44 | FFCP PHASE2:Mm9::chr2:153835527..153835537,+#_c252c939a3973118b18885b24f9a81cd | p@chr2:153835527..153835537, + |
| 2.75e-44 | FFCP PHASE1:Mm9::chr2:153835527..153835537,+#_c252c939a3973118b18885b24f9a81cd | p@chr2:153835527..153835537, + |
| 2.75e-44 | FFCP PHASE2:Mm9::chr2:153833963..153833980,+#_c252c939a3973118b18885b24f9a81cd | p5@Bpifa2e |
| 2.75e-44 | FFCP PHASE1:Mm9::chr2:153833963..153833980,+#_c252c939a3973118b18885b24f9a81cd | p5@Bpifa2e |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:132897242..132897252,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:132897242..132897252, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr16:22918330..22918340,+#_a3e8b3cc8da35cb4073a3f665952e165 | p11@Fetub |
| 4.52e-44 | FFCP PHASE2:Mm9::chr3:129457867..129457873,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr3:129457867..129457873, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51371627..51371665,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51371627..51371665, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr4:149571419..149571431,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr4:149571419..149571431, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr2:154026088..154026101,+#_a3e8b3cc8da35cb4073a3f665952e165 | p5@Bpifb1 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51234798..51234804,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51234798..51234804, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr11:82420686..82420687,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr11:82420686..82420687, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51371627..51371665,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51371627..51371665, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr2:120942174..120942183,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr2:120942174..120942183, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr12:31163928..31163937,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr12:31163928..31163937, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr13:112978961..112978966,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr13:112978961..112978966, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:40359284..40359293,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr17:40359284..40359293, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51209449..51209468,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51209449..51209468, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr18:70435860..70435867,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr18:70435860..70435867, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr6:93765798..93765806,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr6:93765798..93765806, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr2:164015333..164015336,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr2:164015333..164015336, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51268024..51268029,+#_a3e8b3cc8da35cb4073a3f665952e165 | p2@Egfbp2, p2@Klk1b26 |
| 4.52e-44 | FFCP PHASE2:Mm9::chr1:16804330..16804337,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr1:16804330..16804337, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr19:34045246..34045251,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr19:34045246..34045251, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr5:88757032..88757038,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr5:88757032..88757038, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr11:17813681..17813688,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr11:17813681..17813688, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr11:99946757..99946762,-#_a3e8b3cc8da35cb4073a3f665952e165 | p4@Krt32 |
| 4.52e-44 | FFCP PHASE2:Mm9::chr2:129874079..129874084,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr2:129874079..129874084, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51271652..51271675,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51271652..51271675, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr5:75379604..75379605,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr5:75379604..75379605, - |
| 4.52e-44 | FFCP PHASE1:Mm9::chr19:34050959..34050968,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr19:34050959..34050968, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr17:40359258..40359285,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr17:40359258..40359285, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51234512..51234517,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51234512..51234517, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr19:34035639..34035644,+#_a3e8b3cc8da35cb4073a3f665952e165 | p4@Lipf |
| 4.52e-44 | FFCP PHASE1:Mm9::chr4:149563294..149563299,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr4:149563294..149563299, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr9:61048186..61048188,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr9:61048186..61048188, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:34807829..34807836,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:34807829..34807836, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr2:154026088..154026101,+#_a3e8b3cc8da35cb4073a3f665952e165 | p5@Bpifb1 |
| 4.52e-44 | FFCP PHASE2:Mm9::chr18:70404043..70404049,-#_a3e8b3cc8da35cb4073a3f665952e165 | p6@2310002L13Rik |
| 4.52e-44 | FFCP PHASE1:Mm9::chr7:51254288..51254301,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51254288..51254301, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr6:93765798..93765806,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr6:93765798..93765806, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:10497339..10497341,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr17:10497339..10497341, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr8:112138317..112138321,+#_a3e8b3cc8da35cb4073a3f665952e165 | p2@Pkd1l3 |
| 4.52e-44 | FFCP PHASE1:Mm9::chr16:18588865..18588877,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr16:18588865..18588877, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr3:129381353..129381363,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr3:129381353..129381363, - |
| 4.52e-44 | FFCP PHASE2:Mm9::chr7:51360938..51360948,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr7:51360938..51360948, + |
| 4.52e-44 | FFCP PHASE2:Mm9::chr17:24090258..24090267,+#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr17:24090258..24090267, + |
| 4.52e-44 | FFCP PHASE1:Mm9::chr8:95903671..95903681,-#_a3e8b3cc8da35cb4073a3f665952e165 | p3@Ces1h |
| 4.52e-44 | FFCP PHASE1:Mm9::chr11:99699383..99699387,-#_a3e8b3cc8da35cb4073a3f665952e165 | p1@2300003K06Rik |
| 4.52e-44 | FFCP PHASE1:Mm9::chr3:129380917..129380924,-#_a3e8b3cc8da35cb4073a3f665952e165 | p@chr3:129380917..129380924, - |
