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UBERON:0000483

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Name:epithelium
Namespace:FANTOM
Definition:"Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina. Examples: simple squamous epithelium, glandular cuboidal epithelium, transitional epithelium, myoepithelium[CARO]." [CARO:MAH, Wikipedia:Epithelium]
Xrefs:
links:

AAO:0000144
AAO:0010055
AEO:0000066
BILA:0000066
BTO:0000416
CARO:0000066
EHDAA2:0003066
FBbt:00007005
FMA:9639
GAID:402
HAO:0000066
[ Tkanka_nablonkowa.png Tkanka_nablonkowa.png]
MESH:A.10.272
ncithesaurus:Epithelium
SCTID:31610004
TAO:0001486
VHOG:0000387
XAO:0003045

ZFA:0001486
Synonyms: "epithelial tissue" EXACT []
"portion of epithelium" EXACT [FMA:9639]
Alt_id: UBERON:CARO_0000066-FBbt_00007005-FMA_9639-XAO_0003045-ZFA_0001486
Subset: uberon_slim
vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000119(cell layer)
union_of:UBERON:0000486(multilaminar epithelium),UBERON:0000490(unilaminar epithelium)



Children

is a:UBERON:0000486 (multilaminar epithelium),UBERON:0000488 (atypical epithelium),UBERON:0000490 (unilaminar epithelium),UBERON:0003350 (epithelium of mucosa),UBERON:0003914 (epithelial tube),UBERON:0003929 (gut epithelium),UBERON:0004807 (respiratory system epithelium),UBERON:0004808 (gastrointestinal system epithelium),UBERON:0004819 (kidney epithelium),UBERON:0005157 (epithelial fold),UBERON:0005891 (coelomic epithelium),UBERON:0005911 (endo-epithelium),UBERON:0006799 (glandular epithelium),UBERON:0006914 (squamous epithelium),UBERON:0007503 (epithelial vesicle),UBERON:0007625 (pigment epithelium of eye),UBERON:0010077 (cuboidal epithelium),UBERON:0010371 (ecto-epithelium),FF:0011477 (Ileum epithelium 1h after RANKL),FF:0011479 (Ileum epithelium 3h after RANKL),UBERON:0012274 (columnar epithelium),UBERON:0012275 (meso-epithelium),UBERON:0015807 (ear epithelium),FF:10263-104D2 (Follicle Associated Epithelium, pool3)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results Mouse (Mus musculus)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000483 (epithelium), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
7.96e-40FFCP PHASE1:Hg19::chr16:56672571..56672587,+#_76e91f605c6deacc627f56d119a01b07p2@MT1A
7.96e-40FFCP PHASE2:Hg19::chr16:56672571..56672587,+#_76e91f605c6deacc627f56d119a01b07p2@MT1A
2.77e-39FFCP PHASE1:Hg19::chr22:30792980..30793047,+#_a6a095b18bb2b23cd27e73f97eab2dfcp1@SEC14L2
2.77e-39FFCP PHASE2:Hg19::chr22:30792980..30793047,+#_a6a095b18bb2b23cd27e73f97eab2dfcp1@SEC14L2
1.0e-38FFCP PHASE1:Hg19::chr2:26205550..26205624,-#_19e4626008ea7a2373af930f90ecf6c1p1@KIF3C
1.0e-38FFCP PHASE2:Hg19::chr2:26205550..26205624,-#_19e4626008ea7a2373af930f90ecf6c1p1@KIF3C
1.1e-38FFCP PHASE2:Hg19::chr5:148521047..148521076,+#_63033551edd4342fe7cd94a723ad076bp1@ABLIM3
1.1e-38FFCP PHASE1:Hg19::chr5:148521047..148521076,+#_63033551edd4342fe7cd94a723ad076bp1@ABLIM3
1.83e-37FFCP PHASE2:Hg19::chr3:52001448..52001478,-#_a5a059a0c2543caa3b89193ea95c3f2dp2@PCBP4
1.83e-37FFCP PHASE1:Hg19::chr3:52001448..52001478,-#_a5a059a0c2543caa3b89193ea95c3f2dp2@PCBP4
2.51e-37FFCP PHASE2:Hg19::chr18:47088419..47088437,+#_2d5f15e02930ed0cc6ef8c7db5bb58eep1@LIPG
2.51e-37FFCP PHASE1:Hg19::chr18:47088419..47088437,+#_2d5f15e02930ed0cc6ef8c7db5bb58eep1@LIPG
3.78e-37FFCP PHASE1:Hg19::chr3:52001426..52001447,-#_94a2e5fd072d7622d4c009764d46b8a9p3@PCBP4
3.78e-37FFCP PHASE2:Hg19::chr3:52001426..52001447,-#_94a2e5fd072d7622d4c009764d46b8a9p3@PCBP4
6.15e-37FFCP PHASE2:Hg19::chr1:85930830..85930858,-#_a18e8881dae1e8feb13e513cb0cc96dfp1@DDAH1
6.15e-37FFCP PHASE1:Hg19::chr1:85930830..85930858,-#_a18e8881dae1e8feb13e513cb0cc96dfp1@DDAH1
8.11e-37FFCP PHASE1:Hg19::chr11:60691924..60691966,+#_452ad3e1bc5505abee268e99cf6c183dp1@TMEM132A
8.11e-37FFCP PHASE2:Hg19::chr11:60691924..60691966,+#_452ad3e1bc5505abee268e99cf6c183dp1@TMEM132A
8.61e-37FFCP PHASE2:Hg19::chr2:242498138..242498179,+#_ea8d8b58986afda688e5aaa10e13470ep1@BOK
8.61e-37FFCP PHASE1:Hg19::chr2:242498138..242498179,+#_ea8d8b58986afda688e5aaa10e13470ep1@BOK
9.21e-37FFCP PHASE2:Hg19::chrX:140271249..140271333,-#_0e789491d28ba6dbc0229842a76309a2p1@LDOC1
9.21e-37FFCP PHASE1:Hg19::chrX:140271249..140271333,-#_0e789491d28ba6dbc0229842a76309a2p1@LDOC1
1.96e-36FFCP PHASE1:Hg19::chrX:128977781..128977869,-#_8a5dd207f9ba3b0306ae8106200f0f3fp1@ZDHHC9
1.96e-36FFCP PHASE2:Hg19::chrX:128977781..128977869,-#_8a5dd207f9ba3b0306ae8106200f0f3fp1@ZDHHC9
2.56e-36FFCP PHASE1:Hg19::chr17:73389854..73389993,-#_c28230304b8ab6052f7b2ee7f8847d99p2@GRB2
2.56e-36FFCP PHASE2:Hg19::chr17:73389854..73389993,-#_c28230304b8ab6052f7b2ee7f8847d99p2@GRB2
6.53e-36FFCP PHASE2:Hg19::chrX:140271349..140271401,-#_d657db560be5647f8a3da0ab9c1449ebp2@LDOC1
6.53e-36FFCP PHASE1:Hg19::chrX:140271349..140271401,-#_d657db560be5647f8a3da0ab9c1449ebp2@LDOC1
9.8e-36FFCP PHASE1:Hg19::chr2:26205340..26205381,-#_09ff3bb93ded5b4b7887f1cd4a662110p2@KIF3C
9.8e-36FFCP PHASE2:Hg19::chr2:26205340..26205381,-#_09ff3bb93ded5b4b7887f1cd4a662110p2@KIF3C
1.89e-35FFCP PHASE1:Hg19::chr22:41697520..41697613,+#_bd4fe46c91dca45d4b38a9254e4d1a99p1@ZC3H7B
1.89e-35FFCP PHASE2:Hg19::chr22:41697520..41697613,+#_bd4fe46c91dca45d4b38a9254e4d1a99p1@ZC3H7B
2.95e-35FFCP PHASE2:Hg19::chr4:17513702..17513720,-#_d771470916f378963c36fafcb23e41e7p1@QDPR
2.95e-35FFCP PHASE1:Hg19::chr4:17513702..17513720,-#_d771470916f378963c36fafcb23e41e7p1@QDPR
6.03e-35FFCP PHASE1:Hg19::chr15:44487453..44487476,-#_fd17b9fa1aba5d502e5dab4d1f540da3p1@FRMD5
6.03e-35FFCP PHASE2:Hg19::chr15:44487453..44487476,-#_fd17b9fa1aba5d502e5dab4d1f540da3p1@FRMD5
9.98e-35FFCP PHASE1:Hg19::chr19:54412517..54412583,+#_67ac59756e42fedb5cfe1f4ac056f354p1@CACNG7
9.98e-35FFCP PHASE2:Hg19::chr19:54412517..54412583,+#_67ac59756e42fedb5cfe1f4ac056f354p1@CACNG7
1.07e-34FFCP PHASE1:Hg19::chr1:20812690..20812763,-#_db6c6d820409941d1706d6e072088701p1@CAMK2N1
1.07e-34FFCP PHASE2:Hg19::chr1:20812690..20812763,-#_db6c6d820409941d1706d6e072088701p1@CAMK2N1
1.22e-34FFCP PHASE1:Hg19::chr16:58534039..58534056,+#_8afb884e523291e4b120babe7517abc0p1@NDRG4
1.22e-34FFCP PHASE2:Hg19::chr16:58534039..58534056,+#_8afb884e523291e4b120babe7517abc0p1@NDRG4
1.47e-34FFCP PHASE2:Hg19::chr10:15413224..15413308,-#_cf04c2e2625437c6b8b77684d1b94399p2@FAM171A1
1.47e-34FFCP PHASE1:Hg19::chr10:15413224..15413308,-#_cf04c2e2625437c6b8b77684d1b94399p2@FAM171A1
4.0e-34FFCP PHASE1:Hg19::chr11:125366089..125366207,-#_8d1b736e03409532322e9f5eceeb70a4p1@FEZ1
4.0e-34FFCP PHASE2:Hg19::chr11:125366089..125366207,-#_8d1b736e03409532322e9f5eceeb70a4p1@FEZ1
4.72e-34FFCP PHASE1:Hg19::chr4:145567297..145567355,+#_8ed72567f78ca148c35bd7969ea03f48p1@HHIP
4.72e-34FFCP PHASE2:Hg19::chr4:145567297..145567355,+#_8ed72567f78ca148c35bd7969ea03f48p1@HHIP
5.32e-34FFCP PHASE2:Hg19::chr19:54411852..54411908,+#_728f436fb4b26f342b80411bd45f9effp@chr19:54411852..54411908, +
5.32e-34FFCP PHASE1:Hg19::chr19:54411852..54411908,+#_728f436fb4b26f342b80411bd45f9effp@chr19:54411852..54411908, +
6.75e-34FFCP PHASE1:Hg19::chr16:765092..765169,+#_f6ba5d92624852985e3a6d679300fe7fp1@METRN
6.75e-34FFCP PHASE2:Hg19::chr16:765092..765169,+#_f6ba5d92624852985e3a6d679300fe7fp1@METRN
8.27e-34FFCP PHASE2:Hg19::chr3:52001396..52001425,-#_da29bed377641651a0f2bb16c489f818p4@PCBP4
8.27e-34FFCP PHASE1:Hg19::chr3:52001396..52001425,-#_da29bed377641651a0f2bb16c489f818p4@PCBP4
1.22e-33FFCP PHASE1:Hg19::chr3:170136642..170136663,+#_bdafbacc95038dc945c82726aaa1706fp1@CLDN11
1.22e-33FFCP PHASE2:Hg19::chr3:170136642..170136663,+#_bdafbacc95038dc945c82726aaa1706fp1@CLDN11
1.52e-33FFCP PHASE2:Hg19::chr22:38669002..38669024,-#_0428250f4421849cd364df92d9474cf8p1@TMEM184B
1.52e-33FFCP PHASE1:Hg19::chr22:38669002..38669024,-#_0428250f4421849cd364df92d9474cf8p1@TMEM184B
2.38e-33FFCP PHASE2:Hg19::chr19:48281989..48282000,+#_ba925ab9ad9c7e19b0e9ab76ae32e1adp3@SEPW1
2.38e-33FFCP PHASE1:Hg19::chr19:48281989..48282000,+#_ba925ab9ad9c7e19b0e9ab76ae32e1adp3@SEPW1
2.73e-33FFCP PHASE2:Hg19::chr10:15413035..15413131,-#_aee2f23640996dc9a749c60ada6b3cfep1@FAM171A1
2.73e-33FFCP PHASE1:Hg19::chr10:15413035..15413131,-#_aee2f23640996dc9a749c60ada6b3cfep1@FAM171A1
2.89e-33FFCP PHASE2:Hg19::chr16:89989741..89989759,+#_26d4267864c957fe25a6ca708299b61bp1@TUBB3
2.89e-33FFCP PHASE1:Hg19::chr16:89989741..89989759,+#_26d4267864c957fe25a6ca708299b61bp1@TUBB3
3.49e-33FFCP PHASE2:Hg19::chr2:127864608..127864688,-#_8ab208e708cb29122f8d996a7fc40b95p1@BIN1
3.49e-33FFCP PHASE1:Hg19::chr2:127864608..127864688,-#_8ab208e708cb29122f8d996a7fc40b95p1@BIN1
5.84e-33FFCP PHASE1:Hg19::chr17:40118805..40118822,+#_fab15ff5379421151e52c38588e2a052p1@CNP
5.84e-33FFCP PHASE2:Hg19::chr17:40118805..40118822,+#_fab15ff5379421151e52c38588e2a052p1@CNP
6.27e-33FFCP PHASE2:Hg19::chr17:19265883..19265958,-#_42595e05187953c28a206452b2523b09p1@B9D1
6.27e-33FFCP PHASE1:Hg19::chr17:19265883..19265958,-#_42595e05187953c28a206452b2523b09p1@B9D1
8.28e-33FFCP PHASE2:Hg19::chrX:134166360..134166371,+#_4737978c41c0d24707723e50e98a5768p2@FAM127A
8.28e-33FFCP PHASE1:Hg19::chrX:134166360..134166371,+#_4737978c41c0d24707723e50e98a5768p2@FAM127A
8.3e-33FFCP PHASE2:Hg19::chr2:27718052..27718127,-#_f6683b45a72e944624262ba922c43b48p1@FNDC4
8.3e-33FFCP PHASE1:Hg19::chr2:27718052..27718127,-#_f6683b45a72e944624262ba922c43b48p1@FNDC4
1.07e-32FFCP PHASE1:Hg19::chr3:48130707..48130789,-#_3defbd1ea708bbe4a91ff9ec97a06618p4@MAP4
1.07e-32FFCP PHASE2:Hg19::chr3:48130707..48130789,-#_3defbd1ea708bbe4a91ff9ec97a06618p4@MAP4
1.32e-32FFCP PHASE1:Hg19::chr1:153581416..153581458,-#_6806fdc0b6d278c9600d61d9161b006ep4@S100A16
1.32e-32FFCP PHASE2:Hg19::chr1:153581416..153581458,-#_6806fdc0b6d278c9600d61d9161b006ep4@S100A16
1.69e-32FFCP PHASE2:Hg19::chr20:30310656..30310685,-#_27a8311799952f24bc3ab18d387ed7dep1@BCL2L1
1.69e-32FFCP PHASE1:Hg19::chr20:30310656..30310685,-#_27a8311799952f24bc3ab18d387ed7dep1@BCL2L1
2.07e-32FFCP PHASE2:Hg19::chr3:48130317..48130396,-#_71cad29d132f6b7a6188cbb416084a9cp1@MAP4
2.07e-32FFCP PHASE1:Hg19::chr3:48130317..48130396,-#_71cad29d132f6b7a6188cbb416084a9cp1@MAP4
2.23e-32FFCP PHASE1:Hg19::chr9:14314566..14314618,-#_5b880dacef3dc529c1ce5c79d5ee52cbp1@NFIB
2.23e-32FFCP PHASE2:Hg19::chr9:14314566..14314618,-#_5b880dacef3dc529c1ce5c79d5ee52cbp1@NFIB
2.56e-32FFCP PHASE2:Hg19::chrX:134166376..134166394,+#_17a52e698630a7723c17e65a0aa2aaa7p1@FAM127A
2.56e-32FFCP PHASE1:Hg19::chrX:134166376..134166394,+#_17a52e698630a7723c17e65a0aa2aaa7p1@FAM127A
2.69e-32FFCP PHASE1:Hg19::chr20:62327996..62328013,+#_959daba4d91b71af48606ea101e467a5p1@TNFRSF6B
2.69e-32FFCP PHASE2:Hg19::chr20:62327996..62328013,+#_959daba4d91b71af48606ea101e467a5p1@TNFRSF6B
3.67e-32FFCP PHASE2:Hg19::chr4:145567767..145567851,+#_9b5052a7c7bbe273e9951edac23d66c0p2@HHIP
3.67e-32FFCP PHASE1:Hg19::chr4:145567767..145567851,+#_9b5052a7c7bbe273e9951edac23d66c0p2@HHIP
6.28e-32FFCP PHASE1:Hg19::chr19:46105411..46105481,-#_99aee4e4e101a9376cc85024025d4c5ap1@GPR4, p2@OPA3
6.28e-32FFCP PHASE2:Hg19::chr19:46105411..46105481,-#_99aee4e4e101a9376cc85024025d4c5ap1@GPR4, p2@OPA3
7.86e-32FFCP PHASE1:Hg19::chr1:20812315..20812327,-#_c9e5dbffcb271c7cbee684ba709b5d4fp4@CAMK2N1
7.86e-32FFCP PHASE2:Hg19::chr1:20812315..20812327,-#_c9e5dbffcb271c7cbee684ba709b5d4fp4@CAMK2N1
8.33e-32FFCP PHASE1:Hg19::chr9:14314131..14314147,-#_add3f5a591a2aad0250f7305d4378354p2@NFIB
8.33e-32FFCP PHASE2:Hg19::chr9:14314131..14314147,-#_add3f5a591a2aad0250f7305d4378354p2@NFIB
1.2e-31FFCP PHASE2:Hg19::chr9:132934622..132934699,+#_2c12c156110ee380853d6347da096e7ep1@NCS1
1.2e-31FFCP PHASE1:Hg19::chr9:132934622..132934699,+#_2c12c156110ee380853d6347da096e7ep1@NCS1
1.29e-31FFCP PHASE2:Hg19::chr1:79472365..79472443,-#_bbe6027643a0e1a3d255887ffcace202p1@ELTD1
1.29e-31FFCP PHASE1:Hg19::chr1:79472365..79472443,-#_bbe6027643a0e1a3d255887ffcace202p1@ELTD1










Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[CARO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process., Property "Property value" (as page type) with input value "UBPROP:0000001 "Portion of tissue, that consists of one or more layers of epithelial cells connected to each other by cell junctions and which is underlain by a basal lamina.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.