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UBERON:0000998

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Name:seminal vesicle
Namespace:FANTOM
Definition:"Either of a pair of glandular pouches that lie one on either side of the male reproductive tract and in the human male secrete a sugar- and protein-containing fluid into the ejaculatory duct." [BTO:0001234, Wikipedia:Seminal_vesicle]
Xrefs:
links:

AAO:0010788
BTO:0001234
EFO:0000986
EMAPA:19180
EV:0100106
FMA:19386
GAID:394
[1]
[ 200px-Male_anatomy_en.svg.png 200px-Male_anatomy_en.svg.png]
MA:0000410
MAT:0000171
MESH:A.05.360.444.713
MIAA:0000171
ncithesaurus:Seminal_Vesicle
OpenCyc:Mx4rwTtRpJwpEbGdrcN5Y29ycA
SCTID:181434004

VHOG:0001379
Synonyms: "glandula seminalis" RELATED [BTO:0001234]
"glandula vesiculosa" RELATED [BTO:0001234]
"gon_male_sves" RELATED []
"seminal gland" BROAD []
"vas efferens" RELATED []
"vesicul%c3%a6 seminales" RELATED [Wikipedia:Seminal_vesicle]
"vesicula seminalis" RELATED [BTO:0001234]
"vesicula seminalis" RELATED [Wikipedia:Seminal_vesicle]
"vesiculae seminales" RELATED [Wikipedia:Seminal_vesicle]
"vesicular gland" RELATED [Wikipedia:Seminal_vesicle]
"vesicular glands" RELATED [Wikipedia:Seminal_vesicle]
"vesicular seminalis" RELATED [Wikipedia:Seminal_vesicle]
"vesicul�πエ�ヲ seminales" RELATED LATIN [Wikipedia:Seminal_vesicle]
Comments:Function notes: The seminal vesicles secrete a significant proportion of the fluid that ultimately becomes semen. Lipofuscin granules from dead epithelial cells give the secretion its yellowish color. About 50-70%[2] of the seminal fluid in humans originates from the seminal vesicles, but is not expelled in the first ejaculate fractions which are dominated by spermatozoa and zinc-rich prostatic fluid.
Alt_id: UBERON:FBbt_00004958-FMA_19386-MA_0000410-MIAA_0000171-WBbt_0006870
Subset: organ_slim
uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0006868(seminal fluid secreting gland)
develops_from:UBERON:0000080(mesonephros)
part_of:UBERON:0000473(testis)



Children

derives from:FF:0010201 (human seminal vesicle - adult sample)
part of:FF:0011380 (mouse vesicular gland- adult sample),FF:51-27F8 (vesicular gland, adult)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0000998 (seminal vesicle), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr11:60451339..60451345,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:60451339..60451345, -
5.42e-195FFCP PHASE1:Hg19::chr11:34661390..34661395,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:34661390..34661395, -
5.42e-195FFCP PHASE2:Hg19::chr11:34661390..34661395,-#_837a4bbb8fb52e05191ba3762dafdec8p@chr11:34661390..34661395, -
5.42e-195FFCP PHASE1:Hg19::chr11:60451339..60451345,-#_837a4bbb8fb52e05191ba3762dafdec8-, p@chr11:60451339..60451345
9.37e-99FFCP PHASE1:Hg19::chr20:43838283..43838286,+#_453a393677589f9941730e119b6ff499p@chr20:43838283..43838286, +
9.37e-99FFCP PHASE2:Hg19::chr11:34663654..34663663,+#_453a393677589f9941730e119b6ff499p17@EHF
9.37e-99FFCP PHASE1:Hg19::chr19:15739153..15739175,+#_453a393677589f9941730e119b6ff499p@chr19:15739153..15739175, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851172..43851181,+#_453a393677589f9941730e119b6ff499p@chr20:43851172..43851181, +
9.37e-99FFCP PHASE2:Hg19::chr19:15729741..15729749,+#_453a393677589f9941730e119b6ff499p@chr19:15729741..15729749, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851568..43851570,+#_453a393677589f9941730e119b6ff499p@chr20:43851568..43851570, +
9.37e-99FFCP PHASE2:Hg19::chr11:1013442..1013453,-#_453a393677589f9941730e119b6ff499p@chr11:1013442..1013453, -
9.37e-99FFCP PHASE1:Hg19::chr20:43837135..43837167,+#_453a393677589f9941730e119b6ff499p@chr20:43837135..43837167, +
9.37e-99FFCP PHASE1:Hg19::chr19:15731181..15731184,+#_453a393677589f9941730e119b6ff499p@chr19:15731181..15731184, +
9.37e-99FFCP PHASE2:Hg19::chr20:43838313..43838327,+#_453a393677589f9941730e119b6ff499p@chr20:43838313..43838327, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850844..43850864,+#_453a393677589f9941730e119b6ff499p@chr20:43850844..43850864, +
9.37e-99FFCP PHASE2:Hg19::chr19:20265757..20265766,+#_453a393677589f9941730e119b6ff499p@chr19:20265757..20265766, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851312..43851315,+#_453a393677589f9941730e119b6ff499p@chr20:43851312..43851315, +
9.37e-99FFCP PHASE1:Hg19::chr20:43852004..43852005,+#_453a393677589f9941730e119b6ff499p@chr20:43852004..43852005, +
9.37e-99FFCP PHASE2:Hg19::chr19:15733422..15733428,+#_453a393677589f9941730e119b6ff499p@chr19:15733422..15733428, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836736..43836753,+#_453a393677589f9941730e119b6ff499p@chr20:43836736..43836753, +
9.37e-99FFCP PHASE2:Hg19::chr20:43852949..43852953,+#_453a393677589f9941730e119b6ff499p@chr20:43852949..43852953, +
9.37e-99FFCP PHASE1:Hg19::chr19:15728853..15728859,+#_453a393677589f9941730e119b6ff499p@chr19:15728853..15728859, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837223..43837282,+#_453a393677589f9941730e119b6ff499p@chr20:43837223..43837282, +
9.37e-99FFCP PHASE2:Hg19::chr3:46485058..46485065,-#_453a393677589f9941730e119b6ff499p1@AK126237
9.37e-99FFCP PHASE1:Hg19::chr20:43850565..43850590,+#_453a393677589f9941730e119b6ff499p@chr20:43850565..43850590, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850927..43850931,+#_453a393677589f9941730e119b6ff499p@chr20:43850927..43850931, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851737..43851742,+#_453a393677589f9941730e119b6ff499p@chr20:43851737..43851742, +
9.37e-99FFCP PHASE1:Hg19::chr20:40980960..40980970,-#_453a393677589f9941730e119b6ff499p@chr20:40980960..40980970, -
9.37e-99FFCP PHASE2:Hg19::chr20:43850640..43850649,+#_453a393677589f9941730e119b6ff499p@chr20:43850640..43850649, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851377..43851400,+#_453a393677589f9941730e119b6ff499p@chr20:43851377..43851400, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836085..43836090,+#_453a393677589f9941730e119b6ff499p@chr20:43836085..43836090, +
9.37e-99FFCP PHASE2:Hg19::chr19:15730135..15730149,+#_453a393677589f9941730e119b6ff499p@chr19:15730135..15730149, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851758..43851791,+#_453a393677589f9941730e119b6ff499p@chr20:43851758..43851791, +
9.37e-99FFCP PHASE1:Hg19::chr20:43853036..43853043,+#_453a393677589f9941730e119b6ff499p@chr20:43853036..43853043, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837295..43837300,+#_453a393677589f9941730e119b6ff499p@chr20:43837295..43837300, +
9.37e-99FFCP PHASE1:Hg19::chr19:15733200..15733213,+#_453a393677589f9941730e119b6ff499p@chr19:15733200..15733213, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850403..43850416,+#_453a393677589f9941730e119b6ff499+, p@chr20:43850403..43850416
9.37e-99FFCP PHASE1:Hg19::chr20:43851080..43851084,+#_453a393677589f9941730e119b6ff499p@chr20:43851080..43851084, +
9.37e-99FFCP PHASE2:Hg19::chr19:15728825..15728834,+#_453a393677589f9941730e119b6ff499+, p@chr19:15728825..15728834
9.37e-99FFCP PHASE2:Hg19::chr11:125703090..125703100,-#_453a393677589f9941730e119b6ff499p@chr11:125703090..125703100, -
9.37e-99FFCP PHASE2:Hg19::chr20:43851436..43851450,+#_453a393677589f9941730e119b6ff499p@chr20:43851436..43851450, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836939..43836958,+#_453a393677589f9941730e119b6ff499p@chr20:43836939..43836958, +
9.37e-99FFCP PHASE1:Hg19::chr19:15729943..15729948,+#_453a393677589f9941730e119b6ff499p@chr19:15729943..15729948, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837317..43837329,+#_453a393677589f9941730e119b6ff499p@chr20:43837317..43837329, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851110..43851138,+#_453a393677589f9941730e119b6ff499p@chr20:43851110..43851138, +
9.37e-99FFCP PHASE1:Hg19::chr11:1030990..1030995,-#_453a393677589f9941730e119b6ff499p@chr11:1030990..1030995, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851914..43851932,+#_453a393677589f9941730e119b6ff499p@chr20:43851914..43851932, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851992..43851993,+#_453a393677589f9941730e119b6ff499p@chr20:43851992..43851993, +
9.37e-99FFCP PHASE1:Hg19::chr19:15703376..15703385,-#_453a393677589f9941730e119b6ff499p@chr19:15703376..15703385, -
9.37e-99FFCP PHASE1:Hg19::chr20:43850450..43850493,+#_453a393677589f9941730e119b6ff499p@chr20:43850450..43850493, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851532..43851542,+#_453a393677589f9941730e119b6ff499p@chr20:43851532..43851542, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836142..43836161,+#_453a393677589f9941730e119b6ff499p@chr20:43836142..43836161, +
9.37e-99FFCP PHASE1:Hg19::chr11:34816713..34816719,-#_453a393677589f9941730e119b6ff499p@chr11:34816713..34816719, -
9.37e-99FFCP PHASE2:Hg19::chr19:15733036..15733039,+#_453a393677589f9941730e119b6ff499+, p@chr19:15733036..15733039
9.37e-99FFCP PHASE1:Hg19::chr20:43838296..43838299,+#_453a393677589f9941730e119b6ff499p@chr20:43838296..43838299, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850531..43850538,+#_453a393677589f9941730e119b6ff499p@chr20:43850531..43850538, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851184..43851194,+#_453a393677589f9941730e119b6ff499p@chr20:43851184..43851194, +
9.37e-99FFCP PHASE2:Hg19::chr19:15729846..15729851,+#_453a393677589f9941730e119b6ff499p@chr19:15729846..15729851, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851679..43851707,+#_453a393677589f9941730e119b6ff499p@chr20:43851679..43851707, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837196..43837202,+#_453a393677589f9941730e119b6ff499p@chr20:43837196..43837202, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850865..43850873,+#_453a393677589f9941730e119b6ff499p@chr20:43850865..43850873, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851326..43851348,+#_453a393677589f9941730e119b6ff499p@chr20:43851326..43851348, +
9.37e-99FFCP PHASE1:Hg19::chr20:43852924..43852944,+#_453a393677589f9941730e119b6ff499p@chr20:43852924..43852944, +
9.37e-99FFCP PHASE2:Hg19::chr19:15734133..15734157,+#_453a393677589f9941730e119b6ff499p@chr19:15734133..15734157, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836755..43836769,+#_453a393677589f9941730e119b6ff499p@chr20:43836755..43836769, +
9.37e-99FFCP PHASE1:Hg19::chr3:46485058..46485065,-#_453a393677589f9941730e119b6ff499p1@AK126237
9.37e-99FFCP PHASE2:Hg19::chr20:43852958..43852972,+#_453a393677589f9941730e119b6ff499p@chr20:43852958..43852972, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850628..43850633,+#_453a393677589f9941730e119b6ff499p@chr20:43850628..43850633, +
9.37e-99FFCP PHASE1:Hg19::chr15:91849967..91849970,+#_453a393677589f9941730e119b6ff499p@chr15:91849967..91849970, +
9.37e-99FFCP PHASE1:Hg19::chr20:43836066..43836075,-#_453a393677589f9941730e119b6ff499p@chr20:43836066..43836075, -
9.37e-99FFCP PHASE2:Hg19::chr20:43850941..43850991,+#_453a393677589f9941730e119b6ff499p@chr20:43850941..43850991, +
9.37e-99FFCP PHASE1:Hg19::chr11:1025034..1025037,-#_453a393677589f9941730e119b6ff499p@chr11:1025034..1025037, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851747..43851752,+#_453a393677589f9941730e119b6ff499p@chr20:43851747..43851752, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851831..43851874,+#_453a393677589f9941730e119b6ff499+, p@chr20:43851831..43851874
9.37e-99FFCP PHASE1:Hg19::chr20:43850370..43850384,+#_453a393677589f9941730e119b6ff499p@chr20:43850370..43850384, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850651..43850662,+#_453a393677589f9941730e119b6ff499p@chr20:43850651..43850662, +
9.37e-99FFCP PHASE1:Hg19::chr11:1023637..1023640,-#_453a393677589f9941730e119b6ff499p@chr11:1023637..1023640, -
9.37e-99FFCP PHASE1:Hg19::chr20:43851422..43851430,+#_453a393677589f9941730e119b6ff499p@chr20:43851422..43851430, +
9.37e-99FFCP PHASE2:Hg19::chr11:69954393..69954400,-#_453a393677589f9941730e119b6ff499p@chr11:69954393..69954400, -
9.37e-99FFCP PHASE2:Hg19::chr19:15730666..15730675,+#_453a393677589f9941730e119b6ff499p@chr19:15730666..15730675, +
9.37e-99FFCP PHASE1:Hg19::chr20:43837304..43837314,+#_453a393677589f9941730e119b6ff499p@chr20:43837304..43837314, +
9.37e-99FFCP PHASE1:Hg19::chr19:15733422..15733428,+#_453a393677589f9941730e119b6ff499p@chr19:15733422..15733428, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850418..43850438,+#_453a393677589f9941730e119b6ff499p@chr20:43850418..43850438, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851095..43851098,+#_453a393677589f9941730e119b6ff499p@chr20:43851095..43851098, +
9.37e-99FFCP PHASE2:Hg19::chr19:15728853..15728859,+#_453a393677589f9941730e119b6ff499p@chr19:15728853..15728859, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851454..43851459,+#_453a393677589f9941730e119b6ff499p@chr20:43851454..43851459, +
9.37e-99FFCP PHASE2:Hg19::chr11:1030990..1030995,-#_453a393677589f9941730e119b6ff499p@chr11:1030990..1030995, -
9.37e-99FFCP PHASE1:Hg19::chr19:15730000..15730004,+#_453a393677589f9941730e119b6ff499p@chr19:15730000..15730004, +
9.37e-99FFCP PHASE1:Hg19::chr20:43850750..43850755,+#_453a393677589f9941730e119b6ff499p@chr20:43850750..43850755, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851142..43851164,+#_453a393677589f9941730e119b6ff499+, p@chr20:43851142..43851164
9.37e-99FFCP PHASE1:Hg19::chr20:43851935..43851976,+#_453a393677589f9941730e119b6ff499p@chr20:43851935..43851976, +
9.37e-99FFCP PHASE2:Hg19::chr20:43851994..43852003,+#_453a393677589f9941730e119b6ff499p@chr20:43851994..43852003, +
9.37e-99FFCP PHASE1:Hg19::chr19:15706318..15706336,+#_453a393677589f9941730e119b6ff499p@chr19:15706318..15706336, +
9.37e-99FFCP PHASE2:Hg19::chr15:91849967..91849970,+#_453a393677589f9941730e119b6ff499p@chr15:91849967..91849970, +
9.37e-99FFCP PHASE2:Hg19::chr20:43837102..43837114,+#_453a393677589f9941730e119b6ff499p@chr20:43837102..43837114, +
9.37e-99FFCP PHASE2:Hg19::chr20:43850822..43850832,+#_453a393677589f9941730e119b6ff499p@chr20:43850822..43850832, +
9.37e-99FFCP PHASE1:Hg19::chr20:43851568..43851570,+#_453a393677589f9941730e119b6ff499p@chr20:43851568..43851570, +
9.37e-99FFCP PHASE2:Hg19::chr20:43836162..43836169,-#_453a393677589f9941730e119b6ff499p@chr20:43836162..43836169, -
9.37e-99FFCP PHASE1:Hg19::chr11:34841932..34841939,+#_453a393677589f9941730e119b6ff499p@chr11:34841932..34841939, +
9.37e-99FFCP PHASE2:Hg19::chr19:15733072..15733082,+#_453a393677589f9941730e119b6ff499p@chr19:15733072..15733082, +