UBERON:0001041
From FANTOM5_SSTAR
Name: | foregut | ||
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Namespace: | FANTOM | ||
Definition: | "Anterior subdivision of a digestive tract[CJM]. An anterior part of the alimentary canal derived from the ectoderm[WP]." [Wikipedia:Foregut] | ||
Xrefs: |
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Synonyms: | "praeenteron; proenteron" RELATED LATIN [Wikipedia:Foregut] | ||
Comments: | Editor notes: Note we define this generically to include invertebrates, but the class may be split in future. We may explicitly make this a developmental class. AO Notes: in FMA this class has no children. | ||
Alt_id: | UBERON:FBbt_00005379-FMA_45616-MA_0001526-XAO_0000232 | ||
Subset: |
developmental_classification uberon_slim |
Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.
link to ontology dataset
data
Parents
is_a: | UBERON:0004921(subdivision of digestive tract) |
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Children
develops from: | UBERON:0000115 (lung epithelium),UBERON:0001043 (esophagus),UBERON:0003894 (liver primordium),UBERON:0003922 (pancreatic epithelial bud),UBERON:0004908 (upper digestive tract),UBERON:0005597 (lung primordium) |
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part of: | UBERON:0000945 (stomach),UBERON:0003258 (endoderm of foregut),UBERON:0003294 (gland of foregut),UBERON:0009143 (esophageal region),UBERON:0009145 (pharyngeal region of foregut),UBERON:0015833 (foregut epithelium) |
Ontology Tree: Loaded from BioPortal
FF samples
It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 10015-101C6 (esophagus, adult, pool1)
- 10062-101H8 (stomach, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 1035-18D5 (stomach, embryo E17)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10459-106G9
- 10473-106I5
- 10516-107E3
... further results Mouse (Mus musculus)
- 10015-101C6 (esophagus, adult, pool1)
- 10062-101H8 (stomach, fetal, donor1)
- 10093-102C3 (salivary gland, adult, pool1)
- 10199-103F1 (parotid gland, adult)
- 10202-103F4 (submaxillary gland, adult)
- 1035-18D5 (stomach, embryo E17)
- 10436-106E4 (signet ring carcinoma cell line:Kato III)
- 10459-106G9
- 10473-106I5
- 10516-107E3
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001041 (foregut), sorted by p-values
Analyst: Hideya Kawaji
link to source dataset
human : data
mouse : data
P-value | FFCP | Short description |
---|---|---|
1.14e-28 | FFCP PHASE1:Hg19::chr14:38064429..38064486,-#_689a0fb91bc5a1df5c43e636b781aa70 | p1@FOXA1 |
1.14e-28 | FFCP PHASE2:Hg19::chr14:38064429..38064486,-#_689a0fb91bc5a1df5c43e636b781aa70 | p1@FOXA1 |
9.69e-28 | FFCP PHASE1:Hg19::chr17:19651668..19651682,-#_db9e5ad693d5ad724ef4507ce3d0c4cb | p2@ALDH3A1 |
9.69e-28 | FFCP PHASE2:Hg19::chr17:19651668..19651682,-#_db9e5ad693d5ad724ef4507ce3d0c4cb | p2@ALDH3A1 |
6.01e-27 | FFCP PHASE1:Hg19::chr2:234590530..234590553,+#_b84b2db4827b9c517e0ac6cb306715a8 | p1@UGT1A7 |
6.01e-27 | FFCP PHASE2:Hg19::chr2:234590530..234590553,+#_b84b2db4827b9c517e0ac6cb306715a8 | p1@UGT1A7 |
9.26e-27 | FFCP PHASE1:Hg19::chr8:128231080..128231222,-#_bc5d717a55b126cd43d727b65df52caf | p1@ENST00000500112, p1@uc003ysa.1 |
9.26e-27 | FFCP PHASE2:Hg19::chr8:128231080..128231222,-#_bc5d717a55b126cd43d727b65df52caf | p1@ENST00000500112, p1@uc003ysa.1 |
3.81e-26 | FFCP PHASE2:Hg19::chr17:19651654..19651665,-#_ebd1c7c2b52384761102e22ff9163545 | p3@ALDH3A1 |
3.81e-26 | FFCP PHASE1:Hg19::chr17:19651654..19651665,-#_ebd1c7c2b52384761102e22ff9163545 | p3@ALDH3A1 |
6.73e-26 | FFCP PHASE1:Hg19::chr16:68269971..68270059,-#_0187bd4fb18cdc517938cb41f113d0d0 | p1@ESRP2 |
6.73e-26 | FFCP PHASE2:Hg19::chr16:68269971..68270059,-#_0187bd4fb18cdc517938cb41f113d0d0 | p1@ESRP2 |
3.18e-25 | FFCP PHASE2:Hg19::chr6:64281946..64281977,+#_178fb5e5855507c9a72949ecdc23fca7 | p12@PTP4A1 |
3.18e-25 | FFCP PHASE1:Hg19::chr6:64281946..64281977,+#_178fb5e5855507c9a72949ecdc23fca7 | p12@PTP4A1 |
1.33e-24 | FFCP PHASE1:Hg19::chr2:238592039..238592054,+#_8684fb1c2c0f56c9583fa1bd87997329 | p4@LRRFIP1 |
1.33e-24 | FFCP PHASE2:Hg19::chr2:238592039..238592054,+#_8684fb1c2c0f56c9583fa1bd87997329 | p4@LRRFIP1 |
2.5e-24 | FFCP PHASE2:Hg19::chr18:47721315..47721430,-#_64ae6044a87507c1ce54a398eb3955c7 | p1@MYO5B |
2.5e-24 | FFCP PHASE1:Hg19::chr18:47721315..47721430,-#_64ae6044a87507c1ce54a398eb3955c7 | p1@MYO5B |
6.79e-24 | FFCP PHASE1:Hg19::chr4:41361616..41361632,+#_5e9bf0a8ecd2102ff273b2ef1adc19ac | p8@LIMCH1 |
6.79e-24 | FFCP PHASE2:Hg19::chr4:41361616..41361632,+#_5e9bf0a8ecd2102ff273b2ef1adc19ac | p8@LIMCH1 |
8.3e-24 | FFCP PHASE1:Hg19::chr9:124499430..124499462,+#_ca75ed94f9bbccb1e3aacc939f3d1036 | p@chr9:124499430..124499462, + |
8.3e-24 | FFCP PHASE2:Hg19::chr9:124499430..124499462,+#_ca75ed94f9bbccb1e3aacc939f3d1036 | p@chr9:124499430..124499462, + |
1.18e-23 | FFCP PHASE1:Hg19::chr4:41361634..41361643,+#_1fc3978728b0660a32738c4481394d4c | p19@LIMCH1 |
1.18e-23 | FFCP PHASE2:Hg19::chr4:41361634..41361643,+#_1fc3978728b0660a32738c4481394d4c | p19@LIMCH1 |
3.83e-23 | FFCP PHASE2:Hg19::chr2:211543115..211543126,+#_29adadf836470ec0c04f19b89bff3953 | p@chr2:211543115..211543126, + |
3.83e-23 | FFCP PHASE1:Hg19::chr2:211543115..211543126,+#_29adadf836470ec0c04f19b89bff3953 | p@chr2:211543115..211543126, + |
5.47e-23 | FFCP PHASE1:Hg19::chr4:41361774..41361783,+#_28383f0966746aa3fe21641967a7fb39 | p26@LIMCH1 |
5.47e-23 | FFCP PHASE2:Hg19::chr4:41361774..41361783,+#_28383f0966746aa3fe21641967a7fb39 | p26@LIMCH1 |
5.63e-23 | FFCP PHASE2:Mm9::chr16:34807407..34807430,+#_62bb155efe3d664c74c3ffbb95ff0d63 | p@chr16:34807407..34807430, + |
5.63e-23 | FFCP PHASE1:Mm9::chr16:34807407..34807430,+#_62bb155efe3d664c74c3ffbb95ff0d63 | p@chr16:34807407..34807430, + |
1.03e-22 | FFCP PHASE2:Hg19::chr1:207263643..207263662,+#_1dc8c57ff1796534f8ccb23b2b3b0e65 | p@chr1:207263643..207263662, + |
1.03e-22 | FFCP PHASE1:Hg19::chr17:7164410..7164457,-#_1dc8c57ff1796534f8ccb23b2b3b0e65 | p3@CLDN7 |
1.03e-22 | FFCP PHASE1:Hg19::chr1:207263643..207263662,+#_1dc8c57ff1796534f8ccb23b2b3b0e65 | p@chr1:207263643..207263662, + |
1.03e-22 | FFCP PHASE2:Hg19::chr17:7164410..7164457,-#_1dc8c57ff1796534f8ccb23b2b3b0e65 | p3@CLDN7 |
1.37e-22 | FFCP PHASE2:Hg19::chr7:1595831..1595858,-#_0f4781060b0aac8774d73b2f657164f9 | p1@TMEM184A |
1.37e-22 | FFCP PHASE1:Hg19::chr7:1595831..1595858,-#_0f4781060b0aac8774d73b2f657164f9 | p1@TMEM184A |
1.75e-22 | FFCP PHASE1:Hg19::chr6:64282212..64282247,+#_54b8a8882684a0ab1b8733afbbab9610 | p19@PTP4A1 |
1.75e-22 | FFCP PHASE2:Hg19::chr6:64282212..64282247,+#_54b8a8882684a0ab1b8733afbbab9610 | p19@PTP4A1 |
2.01e-22 | FFCP PHASE1:Mm9::chr2:91034924..91034946,-#_cd3442e5463e864aebab3d4129b66262 | p2@Nr1h3 |
2.01e-22 | FFCP PHASE2:Mm9::chr2:91034924..91034946,-#_cd3442e5463e864aebab3d4129b66262 | p2@Nr1h3 |
2.02e-22 | FFCP PHASE2:Hg19::chr3:161318448..161318456,+#_2414134c6c44a83e6b35dc676bd68cda | p@chr3:161318448..161318456, + |
2.02e-22 | FFCP PHASE1:Hg19::chr3:161318448..161318456,+#_2414134c6c44a83e6b35dc676bd68cda | p@chr3:161318448..161318456, + |
2.04e-22 | FFCP PHASE2:Hg19::chr2:211466992..211467008,+#_1d6a00d1e6b29bec23bd441eb9a51d2b | p@chr2:211466992..211467008, + |
2.04e-22 | FFCP PHASE1:Hg19::chr2:211466992..211467008,+#_1d6a00d1e6b29bec23bd441eb9a51d2b | p@chr2:211466992..211467008, + |
2.58e-22 | FFCP PHASE2:Hg19::chr2:226378208..226378213,+#_2715ef31bf1fd7bbdb0eaf743a4f511e | p@chr2:226378208..226378213, + |
2.58e-22 | FFCP PHASE1:Hg19::chr2:226378208..226378213,+#_2715ef31bf1fd7bbdb0eaf743a4f511e | p@chr2:226378208..226378213, + |
9.27e-22 | FFCP PHASE2:Mm9::chr1:173697275..173697301,+#_820e6386b8a2d8c32818320549304bf8 | p1@Slamf1 |
9.27e-22 | FFCP PHASE1:Mm9::chr1:173697275..173697301,+#_820e6386b8a2d8c32818320549304bf8 | p1@Slamf1 |
1.27e-21 | FFCP PHASE1:Hg19::chr13:76334824..76334862,+#_69921bb903a14d1da12cc926bee0f981 | p2@LMO7 |
1.27e-21 | FFCP PHASE2:Hg19::chr13:76334824..76334862,+#_69921bb903a14d1da12cc926bee0f981 | p2@LMO7 |
1.3e-21 | FFCP PHASE2:Hg19::chr2:234296792..234296806,+#_31c63f5141925e7944d275d221f81841 | p13@DGKD |
1.3e-21 | FFCP PHASE1:Hg19::chr2:234296792..234296806,+#_31c63f5141925e7944d275d221f81841 | p13@DGKD |
1.56e-21 | FFCP PHASE1:Mm9::chr11:61474548..61474552,+#_be42603dd8e19dac17e644960de8588d | p@chr11:61474548..61474552, + |
1.56e-21 | FFCP PHASE2:Mm9::chr11:61474548..61474552,+#_be42603dd8e19dac17e644960de8588d | p@chr11:61474548..61474552, + |
2.84e-21 | FFCP PHASE1:Mm9::chr13:41520525..41520563,-#_566995d922d9f5d2cd74c5748f9c2908 | p@chr13:41520525..41520563, - |
2.84e-21 | FFCP PHASE2:Mm9::chr13:41520525..41520563,-#_566995d922d9f5d2cd74c5748f9c2908 | p@chr13:41520525..41520563, - |
3.33e-21 | FFCP PHASE2:Hg19::chr16:87872769..87872797,-#_721d53e5b54853e7f677706fa8a0d618 | p@chr16:87872769..87872797, - |
3.33e-21 | FFCP PHASE1:Hg19::chr16:87872769..87872797,-#_721d53e5b54853e7f677706fa8a0d618 | p@chr16:87872769..87872797, - |
3.48e-21 | FFCP PHASE1:Mm9::chr16:34807285..34807303,+#_48feeaf441af50f13761c72b3b4022eb | p@chr16:34807285..34807303, + |
3.48e-21 | FFCP PHASE2:Mm9::chr16:34807285..34807303,+#_48feeaf441af50f13761c72b3b4022eb | p@chr16:34807285..34807303, + |
3.59e-21 | FFCP PHASE1:Hg19::chr7:101917482..101917507,+#_76c910a108ac234fe650c60d34da1626 | p6@CUX1 |
3.59e-21 | FFCP PHASE2:Hg19::chr7:101917482..101917507,+#_76c910a108ac234fe650c60d34da1626 | p6@CUX1 |
5.73e-21 | FFCP PHASE1:Hg19::chr9:140119618..140119635,+#_1535f834338ebf79079d399b6ca567b1 | p1@C9orf169 |
5.73e-21 | FFCP PHASE2:Hg19::chr9:140119618..140119635,+#_1535f834338ebf79079d399b6ca567b1 | p1@C9orf169 |
7.22e-21 | FFCP PHASE2:Hg19::chr14:64579753..64579770,+#_0bccdb975072e8173214ec6e55c3dc8c | p@chr14:64579753..64579770, + |
7.22e-21 | FFCP PHASE1:Hg19::chr14:64579753..64579770,+#_0bccdb975072e8173214ec6e55c3dc8c | p@chr14:64579753..64579770, + |
9.91e-21 | FFCP PHASE1:Hg19::chr16:68260798..68260800,-#_b58e3daf533a0e448943c2819bba4403 | p@chr16:68260798..68260800, - |
9.91e-21 | FFCP PHASE2:Hg19::chr16:68260798..68260800,-#_b58e3daf533a0e448943c2819bba4403 | p@chr16:68260798..68260800, - |
1.27e-20 | FFCP PHASE2:Hg19::chr1:100111394..100111419,+#_ad9a90a8a9c189423a7a81be375b5d26 | p6@PALMD |
1.27e-20 | FFCP PHASE1:Hg19::chr1:100111394..100111419,+#_ad9a90a8a9c189423a7a81be375b5d26 | p6@PALMD |
1.28e-20 | FFCP PHASE1:Hg19::chr2:211540478..211540490,+#_376ab95fd74e85ce395f0d7326b77aff | p@chr2:211540478..211540490, + |
1.28e-20 | FFCP PHASE2:Hg19::chr2:211540478..211540490,+#_376ab95fd74e85ce395f0d7326b77aff | p@chr2:211540478..211540490, + |
1.59e-20 | FFCP PHASE2:Hg19::chr2:211469821..211469857,+#_025211f61a562c717237bd857485b69b | p8@CPS1 |
1.59e-20 | FFCP PHASE1:Hg19::chr2:211469821..211469857,+#_025211f61a562c717237bd857485b69b | p8@CPS1 |
1.99e-20 | FFCP PHASE1:Hg19::chr7:158766986..158767004,+#_4b05bc84f3f5d0701fd9eb8958670912 | p@chr7:158766986..158767004, + |
1.99e-20 | FFCP PHASE2:Hg19::chr7:158766986..158767004,+#_4b05bc84f3f5d0701fd9eb8958670912 | p@chr7:158766986..158767004, + |
2.04e-20 | FFCP PHASE2:Hg19::chr21:44817397..44817432,-#_440c670e65b3172c091a3fd909c7384d | p@chr21:44817397..44817432, - |
2.04e-20 | FFCP PHASE1:Hg19::chr21:44817397..44817432,-#_440c670e65b3172c091a3fd909c7384d | p@chr21:44817397..44817432, - |
2.23e-20 | FFCP PHASE1:Hg19::chr20:62168672..62168713,-#_458e0e419e934cf77e880e2239d4164a | p1@PTK6 |
2.23e-20 | FFCP PHASE2:Hg19::chr20:62168672..62168713,-#_458e0e419e934cf77e880e2239d4164a | p1@PTK6 |
2.89e-20 | FFCP PHASE2:Hg19::chr8:128241234..128241241,-#_985f84d33bfadadadabcc932ae88c1a2 | p7@uc003ysb.2 |
2.89e-20 | FFCP PHASE2:Hg19::chr16:87869864..87869878,+#_985f84d33bfadadadabcc932ae88c1a2 | p@chr16:87869864..87869878, + |
2.89e-20 | FFCP PHASE2:Hg19::chr16:87874486..87874492,-#_985f84d33bfadadadabcc932ae88c1a2 | p@chr16:87874486..87874492, - |
2.89e-20 | FFCP PHASE2:Hg19::chr17:79098633..79098647,-#_985f84d33bfadadadabcc932ae88c1a2 | p@chr17:79098633..79098647, - |
2.89e-20 | FFCP PHASE2:Hg19::chr2:233244473..233244503,+#_985f84d33bfadadadabcc932ae88c1a2 | p1@AK297894 |
2.89e-20 | FFCP PHASE2:Hg19::chr2:233244912..233244922,+#_985f84d33bfadadadabcc932ae88c1a2 | p2@AK297894 |
2.89e-20 | FFCP PHASE2:Hg19::chr2:233246459..233246472,+#_985f84d33bfadadadabcc932ae88c1a2 | p9@ALPP |
2.89e-20 | FFCP PHASE2:Hg19::chr2:233246793..233246841,-#_985f84d33bfadadadabcc932ae88c1a2 | p1@ENST00000441266 |
2.89e-20 | FFCP PHASE2:Hg19::chr2:233246932..233246943,+#_985f84d33bfadadadabcc932ae88c1a2 | p6@ALPP |
2.89e-20 | FFCP PHASE2:Hg19::chr2:53732986..53732989,-#_985f84d33bfadadadabcc932ae88c1a2 | p@chr2:53732986..53732989, - |
2.89e-20 | FFCP PHASE1:Hg19::chr8:128241234..128241241,-#_985f84d33bfadadadabcc932ae88c1a2 | p7@uc003ysb.2 |
2.89e-20 | FFCP PHASE1:Hg19::chr16:87869864..87869878,+#_985f84d33bfadadadabcc932ae88c1a2 | p@chr16:87869864..87869878, + |
2.89e-20 | FFCP PHASE1:Hg19::chr16:87874486..87874492,-#_985f84d33bfadadadabcc932ae88c1a2 | p@chr16:87874486..87874492, - |
2.89e-20 | FFCP PHASE1:Hg19::chr17:79098633..79098647,-#_985f84d33bfadadadabcc932ae88c1a2 | p@chr17:79098633..79098647, - |
2.89e-20 | FFCP PHASE1:Hg19::chr2:233244473..233244503,+#_985f84d33bfadadadabcc932ae88c1a2 | p1@AK297894 |
2.89e-20 | FFCP PHASE1:Hg19::chr2:233244912..233244922,+#_985f84d33bfadadadabcc932ae88c1a2 | p2@AK297894 |
2.89e-20 | FFCP PHASE1:Hg19::chr2:233246459..233246472,+#_985f84d33bfadadadabcc932ae88c1a2 | p9@ALPP |
2.89e-20 | FFCP PHASE1:Hg19::chr2:233246793..233246841,-#_985f84d33bfadadadabcc932ae88c1a2 | p1@ENST00000441266 |
2.89e-20 | FFCP PHASE1:Hg19::chr2:233246932..233246943,+#_985f84d33bfadadadabcc932ae88c1a2 | p6@ALPP |
2.89e-20 | FFCP PHASE1:Hg19::chr2:53732986..53732989,-#_985f84d33bfadadadabcc932ae88c1a2 | p@chr2:53732986..53732989, - |