Personal tools

Difference between revisions of "UBERON:0001179"

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{UBERON |id=UBERON:0001179 |name=peritoneal cavity |namespace= |def="Cavity of serous sac surrounded by the peritoneum.[FMA]" [FMA:FMA, Wikipedia:Peritoneal_cavity] |xre...")
 
Line 21: Line 21:
 
|part_of=
 
|part_of=
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
 +
|is_obsolete=
 +
|preceded_by=
 
}}
 
}}

Revision as of 08:11, 15 June 2012

Name:peritoneal cavity
Definition:"Cavity of serous sac surrounded by the peritoneum.[FMA]" [FMA:FMA, Wikipedia:Peritoneal_cavity]
Xrefs:
links:

BTO:0001782
EHDAA2:0001446
EMAPA:18452
EMAPA:18454
EMAPA:18461
FMA:14704
GAID:24
MA:0000054
MESH:A.01.047.025.600.678
ncithesaurus:Peritoneal_Cavity
SCTID:181616008

VHOG:0000852
Synonyms: "cavitas peritonealis" RELATED [BTO:0001782]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_14704-MA_0000054
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0002323(body cavity)
develops_from:UBERON:0003887(intraembryonic coelom)



Children

part of:UBERON:0009664 (gut mesentery)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001179 (peritoneal cavity), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.98e-131FFCP PHASE1:Hg19::chr11:925449..925458,+#_a48e377de8d25d5e9b1d52c53f40fcdcp17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr11:56859693..56859701,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE2:Hg19::chr8:47834174..47834213,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr21:28820892..28820899,-#_a48e377de8d25d5e9b1d52c53f40fcdcp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr10:98014908..98014919,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE1:Hg19::chr9:133973310..133973321,+#_a48e377de8d25d5e9b1d52c53f40fcdcp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr6:152639579..152639586,-#_a48e377de8d25d5e9b1d52c53f40fcdcp60@SYNE1
8.98e-131FFCP PHASE2:Hg19::chr11:56859608..56859619,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859584..56859589,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr6:119812455..119812476,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc003pyn.1
8.98e-131FFCP PHASE1:Hg19::chr19:32401253..32401271,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269434..127269438,-#_a48e377de8d25d5e9b1d52c53f40fcdcp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr9:79894790..79894797,+#_a48e377de8d25d5e9b1d52c53f40fcdcp10@VPS13A
8.98e-131FFCP PHASE2:Hg19::chr9:127269434..127269438,-#_a48e377de8d25d5e9b1d52c53f40fcdcp8@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr8:22424743..22424759,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr4:76901930..76901942,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr1:157811772..157811796,-#_a48e377de8d25d5e9b1d52c53f40fcdcp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chr21:28820941..28820952,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr21:28820911..28820933,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000420186, p1@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr17:78171885..78171900,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:159172187..159172197,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr9:127260615..127260651,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr10:98014943..98014960,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014943..98014960, -
8.98e-131FFCP PHASE2:Hg19::chr1:28520450..28520453,-#_a48e377de8d25d5e9b1d52c53f40fcdcp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr16:84218794..84218800,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE2:Hg19::chr9:127260615..127260651,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:127260615..127260651, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859638..56859643,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859603..56859606,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr15:95561320..95561328,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE1:Hg19::chr9:127269462..127269484,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@NR5A1
8.98e-131FFCP PHASE2:Hg19::chrX:69645652..69645664,+#_a48e377de8d25d5e9b1d52c53f40fcdcp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr9:124516729..124516752,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr11:1891326..1891337,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269462..127269484,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr8:22436248..22436259,+#_a48e377de8d25d5e9b1d52c53f40fcdcp11@PDLIM2
8.98e-131FFCP PHASE2:Hg19::chr11:925449..925458,+#_a48e377de8d25d5e9b1d52c53f40fcdcp17@AP2A2
8.98e-131FFCP PHASE1:Hg19::chr21:28820954..28820963,-#_a48e377de8d25d5e9b1d52c53f40fcdcp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr9:133973310..133973321,+#_a48e377de8d25d5e9b1d52c53f40fcdcp18@AIF1L
8.98e-131FFCP PHASE2:Hg19::chr21:28820941..28820952,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000420186, p2@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr8:47834174..47834213,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000524012
8.98e-131FFCP PHASE2:Hg19::chr8:22424709..22424716,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chr10:98014908..98014919,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr10:98014908..98014919, -
8.98e-131FFCP PHASE2:Hg19::chr19:32401253..32401271,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr19:32401253..32401271, -
8.98e-131FFCP PHASE2:Hg19::chr11:56859693..56859701,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859693..56859701, -
8.98e-131FFCP PHASE1:Hg19::chr11:56859608..56859619,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859608..56859619, -
8.98e-131FFCP PHASE1:Hg19::chr15:95561320..95561328,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr15:95561320..95561328, -
8.98e-131FFCP PHASE2:Hg19::chr9:127269488..127269495,-#_a48e377de8d25d5e9b1d52c53f40fcdcp5@NR5A1
8.98e-131FFCP PHASE2:Hg19::chr9:124516729..124516752,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr9:124516729..124516752, +
8.98e-131FFCP PHASE2:Hg19::chr6:119812455..119812476,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc003pyn.1
8.98e-131FFCP PHASE2:Hg19::chr21:28820954..28820963,-#_a48e377de8d25d5e9b1d52c53f40fcdcp3@ENST00000420186, p3@uc002ymh.2
8.98e-131FFCP PHASE2:Hg19::chr17:78171885..78171900,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr17:78171885..78171900, +
8.98e-131FFCP PHASE1:Hg19::chr1:28520450..28520453,-#_a48e377de8d25d5e9b1d52c53f40fcdcp21@PTAFR
8.98e-131FFCP PHASE2:Hg19::chr14:75904485..75904519,+#_a48e377de8d25d5e9b1d52c53f40fcdcp12@JDP2
8.98e-131FFCP PHASE2:Hg19::chr11:56859584..56859589,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859584..56859589, -
8.98e-131FFCP PHASE1:Hg19::chr14:75904485..75904519,+#_a48e377de8d25d5e9b1d52c53f40fcdcp12@JDP2
8.98e-131FFCP PHASE2:Hg19::chr1:159172187..159172197,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@uc001ftm.1
8.98e-131FFCP PHASE1:Hg19::chr7:22259740..22259751,-#_a48e377de8d25d5e9b1d52c53f40fcdcp19@RAPGEF5
8.98e-131FFCP PHASE2:Hg19::chr8:22424743..22424759,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000517384
8.98e-131FFCP PHASE1:Hg19::chr10:98014943..98014960,-#_a48e377de8d25d5e9b1d52c53f40fcdc-, p@chr10:98014943..98014960
8.98e-131FFCP PHASE1:Hg19::chr21:28820892..28820899,-#_a48e377de8d25d5e9b1d52c53f40fcdcp4@ENST00000420186, p4@uc002ymh.2
8.98e-131FFCP PHASE1:Hg19::chr11:56859638..56859643,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859638..56859643, -
8.98e-131FFCP PHASE2:Hg19::chr7:22259740..22259751,-#_a48e377de8d25d5e9b1d52c53f40fcdcp19@RAPGEF5
8.98e-131FFCP PHASE1:Hg19::chr9:127269488..127269495,-#_a48e377de8d25d5e9b1d52c53f40fcdcp5@NR5A1
8.98e-131FFCP PHASE1:Hg19::chr1:157811772..157811796,-#_a48e377de8d25d5e9b1d52c53f40fcdcp7@CD5L
8.98e-131FFCP PHASE1:Hg19::chrX:69645652..69645664,+#_a48e377de8d25d5e9b1d52c53f40fcdcp7@GDPD2
8.98e-131FFCP PHASE1:Hg19::chr11:1891326..1891337,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:1891326..1891337, -
8.98e-131FFCP PHASE1:Hg19::chr4:76901930..76901942,+#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000501239
8.98e-131FFCP PHASE2:Hg19::chr11:56859603..56859606,-#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr11:56859603..56859606, -
8.98e-131FFCP PHASE2:Hg19::chr9:79894790..79894797,+#_a48e377de8d25d5e9b1d52c53f40fcdcp10@VPS13A
8.98e-131FFCP PHASE1:Hg19::chr6:152639579..152639586,-#_a48e377de8d25d5e9b1d52c53f40fcdcp60@SYNE1
8.98e-131FFCP PHASE1:Hg19::chr8:22424709..22424716,-#_a48e377de8d25d5e9b1d52c53f40fcdcp2@ENST00000517384
8.98e-131FFCP PHASE2:Hg19::chr8:22436248..22436259,+#_a48e377de8d25d5e9b1d52c53f40fcdcp11@PDLIM2
8.98e-131FFCP PHASE1:Hg19::chr16:84218794..84218800,+#_a48e377de8d25d5e9b1d52c53f40fcdcp@chr16:84218794..84218800, +
8.98e-131FFCP PHASE1:Hg19::chr21:28820911..28820933,-#_a48e377de8d25d5e9b1d52c53f40fcdcp1@ENST00000420186, p1@uc002ymh.2
6.24e-88FFCP PHASE1:Hg19::chr1:21011608..21011618,-#_9b562dcb202d59fbff6d4dfccfdc0ceep15@KIF17
6.24e-88FFCP PHASE1:Hg19::chr11:56859722..56859732,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr11:56859722..56859732, -
6.24e-88FFCP PHASE2:Hg19::chr22:36718586..36718593,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr22:36718586..36718593, -
6.24e-88FFCP PHASE1:Hg19::chr21:40459334..40459341,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr19:32401274..32401289,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr3:130267501..130267516,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr3:130267501..130267516, +
6.24e-88FFCP PHASE1:Hg19::chr4:146461014..146461025,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr4:146461014..146461025, +
6.24e-88FFCP PHASE2:Hg19::chr4:146461014..146461025,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr4:146461014..146461025, +
6.24e-88FFCP PHASE1:Hg19::chr22:36718586..36718593,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr22:36718586..36718593, -
6.24e-88FFCP PHASE2:Hg19::chr21:40459334..40459341,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr21:40459334..40459341, +
6.24e-88FFCP PHASE1:Hg19::chr3:130267501..130267516,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr3:130267501..130267516, +
6.24e-88FFCP PHASE2:Hg19::chr19:32401274..32401289,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr19:32401274..32401289, -
6.24e-88FFCP PHASE2:Hg19::chr11:56859722..56859732,-#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr11:56859722..56859732, -
6.24e-88FFCP PHASE2:Hg19::chr1:21011608..21011618,-#_9b562dcb202d59fbff6d4dfccfdc0ceep15@KIF17
6.24e-88FFCP PHASE1:Hg19::chr9:127267367..127267383,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr9:127267367..127267383, +
6.24e-88FFCP PHASE2:Hg19::chr9:127267367..127267383,+#_9b562dcb202d59fbff6d4dfccfdc0ceep@chr9:127267367..127267383, +
9.74e-88FFCP PHASE1:Hg19::chr14:24168655..24168686,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr14:24168655..24168686,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr14:24168655..24168686, +
9.74e-88FFCP PHASE2:Hg19::chr16:70680361..70680370,+#_7bb068aa10c9e464b4df16c69a0694c4p6@IL34
9.74e-88FFCP PHASE1:Hg19::chr16:70680361..70680370,+#_7bb068aa10c9e464b4df16c69a0694c4p6@IL34
9.74e-88FFCP PHASE2:Hg19::chr2:128321491..128321509,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr7:151070957..151070988,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr7:151070957..151070988,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr7:151070957..151070988, +
9.74e-88FFCP PHASE1:Hg19::chr2:128321491..128321509,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:128321491..128321509, +
9.74e-88FFCP PHASE2:Hg19::chr12:72481040..72481051,+#_7bb068aa10c9e464b4df16c69a0694c4p19@TRHDE
9.74e-88FFCP PHASE2:Hg19::chr2:1508349..1508357,+#_7bb068aa10c9e464b4df16c69a0694c4p@chr2:1508349..1508357, +