Personal tools

UBERON:0001259

From FANTOM5_SSTAR

Revision as of 17:17, 12 September 2014 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:mucosa of urinary bladder
Namespace:FANTOM
Definition:"A mucosa that is part of a urinary bladder [Obol]." [OBOL:automatic]
Xrefs:
links:

EFO:0000293
FMA:15928
galen:MucousMembraneOfUrinaryBladder
MA:0001692
ncithesaurus:Bladder_Mucosa

SCTID:362224004
Synonyms: "bladder mucosa" EXACT []
"bladder mucosa of organ" EXACT [OBOL:automatic]
"bladder mucous membrane" EXACT [OBOL:automatic]
"bladder organ mucosa" EXACT [OBOL:automatic]
"mucosa of bladder" EXACT [OBOL:automatic]
"mucosa of organ of bladder" EXACT [OBOL:automatic]
"mucosa of organ of urinary bladder" EXACT [OBOL:automatic]
"mucous membrane of bladder" EXACT []
"mucous membrane of urinary bladder" EXACT []
"organ mucosa of bladder" EXACT [OBOL:automatic]
"organ mucosa of urinary bladder" EXACT [OBOL:automatic]
"tunica mucosa (vesica urinaria)" EXACT [FMA:15928, FMA:TA]
"tunica mucosa vesicae" EXACT [FMA:15928, FMA:TA]
"urinary bladder mucosa" EXACT []
"urinary bladder mucosa of organ" EXACT [OBOL:automatic]
"urinary bladder mucous membrane" EXACT [OBOL:automatic]
"urinary bladder organ mucosa" EXACT [OBOL:automatic]
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_15928-MA_0001692

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000344(mucosa),UBERON:0004120(mesoderm-derived structure),UBERON:0006554(urinary system structure)
part_of:UBERON:0001255(urinary bladder),UBERON:0001256(wall of urinary bladder)



Children

part of:UBERON:0004645 (urinary bladder urothelium)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001259 (mucosa of urinary bladder), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr10:5660248..5660254,-#_081a0ad06e1e239139c72558c1a02c06p2@ENST00000427341
5.42e-195FFCP PHASE1:Hg19::chr15:101282110..101282113,+#_081a0ad06e1e239139c72558c1a02c06p@chr15:101282110..101282113, +
5.42e-195FFCP PHASE2:Hg19::chr15:101282110..101282113,+#_081a0ad06e1e239139c72558c1a02c06p@chr15:101282110..101282113, +
5.42e-195FFCP PHASE1:Hg19::chr10:5660248..5660254,-#_081a0ad06e1e239139c72558c1a02c06p2@ENST00000427341
9.37e-99FFCP PHASE1:Hg19::chr6:21664489..21664494,+#_ae00e5b11356a1840f91eec1fdb2aabdp@chr6:21664489..21664494, +
9.37e-99FFCP PHASE2:Hg19::chr6:21664489..21664494,+#_ae00e5b11356a1840f91eec1fdb2aabdp@chr6:21664489..21664494, +
9.37e-99FFCP PHASE1:Hg19::chr6:21666284..21666297,+#_ae00e5b11356a1840f91eec1fdb2aabdp26@LINC00340
9.37e-99FFCP PHASE2:Hg19::chr6:21666284..21666297,+#_ae00e5b11356a1840f91eec1fdb2aabdp26@LINC00340
9.37e-99FFCP PHASE1:Hg19::chr6:21383702..21383704,+#_ae00e5b11356a1840f91eec1fdb2aabdp@chr6:21383702..21383704, +
9.37e-99FFCP PHASE1:Hg19::chr21:39627877..39627884,+#_ae00e5b11356a1840f91eec1fdb2aabdp@chr21:39627877..39627884, +
9.37e-99FFCP PHASE2:Hg19::chr6:21383702..21383704,+#_ae00e5b11356a1840f91eec1fdb2aabdp@chr6:21383702..21383704, +
9.37e-99FFCP PHASE2:Hg19::chr21:39627877..39627884,+#_ae00e5b11356a1840f91eec1fdb2aabdp@chr21:39627877..39627884, +
9.37e-99FFCP PHASE1:Hg19::chr3:13992334..13992338,-#_ae00e5b11356a1840f91eec1fdb2aabdp@chr3:13992334..13992338, -
9.37e-99FFCP PHASE2:Hg19::chr3:13992334..13992338,-#_ae00e5b11356a1840f91eec1fdb2aabdp@chr3:13992334..13992338, -
9.37e-99FFCP PHASE1:Hg19::chr6:21588091..21588098,-#_ae00e5b11356a1840f91eec1fdb2aabdp@chr6:21588091..21588098, -
9.37e-99FFCP PHASE2:Hg19::chr6:21588091..21588098,-#_ae00e5b11356a1840f91eec1fdb2aabdp@chr6:21588091..21588098, -
2.55e-98FFCP PHASE1:Hg19::chr6:21876977..21876981,+#_40bb1b7137c87bdd1290186db07ec7b0p@chr6:21876977..21876981, +
2.55e-98FFCP PHASE2:Hg19::chr6:21876977..21876981,+#_40bb1b7137c87bdd1290186db07ec7b0p@chr6:21876977..21876981, +
2.55e-98FFCP PHASE2:Hg19::chr1:233430709..233430711,+#_40bb1b7137c87bdd1290186db07ec7b0p@chr1:233430709..233430711, +
2.55e-98FFCP PHASE1:Hg19::chr1:233430709..233430711,+#_40bb1b7137c87bdd1290186db07ec7b0p@chr1:233430709..233430711, +
1.23e-66FFCP PHASE1:Hg19::chr13:96459990..96459992,+#_bfd65ebef0b6e0e725f4f5adb5f2bf0fp@chr13:96459990..96459992, +
1.23e-66FFCP PHASE2:Hg19::chr13:96459990..96459992,+#_bfd65ebef0b6e0e725f4f5adb5f2bf0fp@chr13:96459990..96459992, +
1.23e-66FFCP PHASE1:Hg19::chr6:21664412..21664419,+#_bfd65ebef0b6e0e725f4f5adb5f2bf0fp@chr6:21664412..21664419, +
1.23e-66FFCP PHASE2:Hg19::chr6:21664412..21664419,+#_bfd65ebef0b6e0e725f4f5adb5f2bf0fp@chr6:21664412..21664419, +
2.39e-66FFCP PHASE1:Hg19::chr6:20534754..20534756,-#_2b529a2d71f4a292e2f8e83087a5950ap@chr6:20534754..20534756, -
2.39e-66FFCP PHASE1:Hg19::chr2:176971270..176971277,-#_2b529a2d71f4a292e2f8e83087a5950ap@chr2:176971270..176971277, -
2.39e-66FFCP PHASE2:Hg19::chr2:176971270..176971277,-#_2b529a2d71f4a292e2f8e83087a5950ap@chr2:176971270..176971277, -
2.39e-66FFCP PHASE2:Hg19::chr6:20534754..20534756,-#_2b529a2d71f4a292e2f8e83087a5950ap@chr6:20534754..20534756, -
2.39e-66FFCP PHASE1:Hg19::chr11:69867053..69867065,-#_2b529a2d71f4a292e2f8e83087a5950ap2@ENST00000528507
2.39e-66FFCP PHASE2:Hg19::chr11:69867053..69867065,-#_2b529a2d71f4a292e2f8e83087a5950ap2@ENST00000528507
2.39e-66FFCP PHASE1:Hg19::chr15:79296342..79296353,-#_2b529a2d71f4a292e2f8e83087a5950ap@chr15:79296342..79296353, -
2.39e-66FFCP PHASE2:Hg19::chr15:79296342..79296353,-#_2b529a2d71f4a292e2f8e83087a5950ap@chr15:79296342..79296353, -
4.66e-66FFCP PHASE1:Hg19::chr14:80855894..80855900,+#_bb247bc790e118b05ec59ae98bccc453p@chr14:80855894..80855900, +
4.66e-66FFCP PHASE2:Hg19::chr14:80855894..80855900,+#_bb247bc790e118b05ec59ae98bccc453p@chr14:80855894..80855900, +
4.66e-66FFCP PHASE1:Hg19::chr15:40544787..40544798,+#_bb247bc790e118b05ec59ae98bccc453p23@PAK6
4.66e-66FFCP PHASE2:Hg19::chr15:40544787..40544798,+#_bb247bc790e118b05ec59ae98bccc453p23@PAK6
4.66e-66FFCP PHASE1:Hg19::chr11:92613787..92613796,+#_bb247bc790e118b05ec59ae98bccc453p@chr11:92613787..92613796, +
4.66e-66FFCP PHASE2:Hg19::chr11:92613787..92613796,+#_bb247bc790e118b05ec59ae98bccc453p@chr11:92613787..92613796, +
1.46e-50FFCP PHASE1:Hg19::chr6:21665769..21665780,+#_7f339ffb7659e17810ca61eb3fbf37a6p@chr6:21665769..21665780, +
1.46e-50FFCP PHASE2:Hg19::chr6:21665769..21665780,+#_7f339ffb7659e17810ca61eb3fbf37a6p@chr6:21665769..21665780, +
1.46e-50FFCP PHASE1:Hg19::chr6:21022855..21022892,+#_7f339ffb7659e17810ca61eb3fbf37a6p@chr6:21022855..21022892, +
1.46e-50FFCP PHASE2:Hg19::chr6:21022855..21022892,+#_7f339ffb7659e17810ca61eb3fbf37a6p@chr6:21022855..21022892, +
1.46e-50FFCP PHASE1:Hg19::chr6:21665113..21665128,-#_7f339ffb7659e17810ca61eb3fbf37a6p@chr6:21665113..21665128, -
1.46e-50FFCP PHASE2:Hg19::chr6:21665113..21665128,-#_7f339ffb7659e17810ca61eb3fbf37a6p@chr6:21665113..21665128, -
3.99e-50FFCP PHASE1:Hg19::chr17:4699695..4699699,-#_7e7edcd1e50c98f7bc612f6d104c3678p@chr17:4699695..4699699, -
3.99e-50FFCP PHASE2:Hg19::chr17:4699695..4699699,-#_7e7edcd1e50c98f7bc612f6d104c3678p@chr17:4699695..4699699, -
9.91e-41FFCP PHASE2:Hg19::chr10:30046722..30046725,-#_dd1b64264743ee87485c3aa0ad5c40a7p@chr10:30046722..30046725, -
9.91e-41FFCP PHASE1:Hg19::chr10:30046722..30046725,-#_dd1b64264743ee87485c3aa0ad5c40a7p@chr10:30046722..30046725, -
9.91e-41FFCP PHASE1:Hg19::chr5:57555322..57555334,-#_dd1b64264743ee87485c3aa0ad5c40a7p@chr5:57555322..57555334, -
9.91e-41FFCP PHASE2:Hg19::chr5:57555322..57555334,-#_dd1b64264743ee87485c3aa0ad5c40a7p@chr5:57555322..57555334, -
9.91e-41FFCP PHASE1:Hg19::chr6:22221030..22221034,+#_dd1b64264743ee87485c3aa0ad5c40a7p1@AL117559
9.91e-41FFCP PHASE2:Hg19::chr6:22221030..22221034,+#_dd1b64264743ee87485c3aa0ad5c40a7p1@AL117559
1.48e-40FFCP PHASE2:Hg19::chr10:30151938..30151956,-#_e35a9c248618b4eef75170e7f3270925p@chr10:30151938..30151956, -
1.48e-40FFCP PHASE1:Hg19::chr10:30151938..30151956,-#_e35a9c248618b4eef75170e7f3270925p@chr10:30151938..30151956, -
1.48e-40FFCP PHASE1:Hg19::chr17:2264983..2264992,+#_e35a9c248618b4eef75170e7f3270925p@chr17:2264983..2264992, +
1.48e-40FFCP PHASE2:Hg19::chr17:2264983..2264992,+#_e35a9c248618b4eef75170e7f3270925p@chr17:2264983..2264992, +
3.3e-40FFCP PHASE1:Hg19::chr19:48102065..48102072,+#_97c701c456c776efd3b0aad35f9c5b31p@chr19:48102065..48102072, +
3.3e-40FFCP PHASE2:Hg19::chr19:48102065..48102072,+#_97c701c456c776efd3b0aad35f9c5b31p@chr19:48102065..48102072, +
3.3e-40FFCP PHASE1:Hg19::chr15:101417937..101417955,+#_97c701c456c776efd3b0aad35f9c5b31p8@ALDH1A3
3.3e-40FFCP PHASE2:Hg19::chr15:101417937..101417955,+#_97c701c456c776efd3b0aad35f9c5b31p8@ALDH1A3
1.84e-34FFCP PHASE1:Hg19::chr6:21680979..21680984,+#_25fc4b9e6b0ef369404c72fe23c32f88p@chr6:21680979..21680984, +
1.84e-34FFCP PHASE2:Hg19::chr6:21680979..21680984,+#_25fc4b9e6b0ef369404c72fe23c32f88p@chr6:21680979..21680984, +
2.58e-34FFCP PHASE2:Hg19::chr6:21070033..21070038,+#_5720b5e8dc1c1b2600ccebc7c85d2f68p@chr6:21070033..21070038, +
2.58e-34FFCP PHASE1:Hg19::chr2:177042702..177042725,-#_5720b5e8dc1c1b2600ccebc7c85d2f68p2@uc002uku.2
2.58e-34FFCP PHASE2:Hg19::chr2:177042702..177042725,-#_5720b5e8dc1c1b2600ccebc7c85d2f68p2@uc002uku.2
2.58e-34FFCP PHASE1:Hg19::chr4:183752843..183752848,+#_5720b5e8dc1c1b2600ccebc7c85d2f68p@chr4:183752843..183752848, +
2.58e-34FFCP PHASE2:Hg19::chr4:183752843..183752848,+#_5720b5e8dc1c1b2600ccebc7c85d2f68p@chr4:183752843..183752848, +
2.58e-34FFCP PHASE1:Hg19::chr6:21070033..21070038,+#_5720b5e8dc1c1b2600ccebc7c85d2f68p@chr6:21070033..21070038, +
3.61e-34FFCP PHASE2:Hg19::chr6:22047883..22047886,+#_22c0ceef71cd1c27cbc2d067533c323bp@chr6:22047883..22047886, +
3.61e-34FFCP PHASE1:Hg19::chr6:22047883..22047886,+#_22c0ceef71cd1c27cbc2d067533c323bp@chr6:22047883..22047886, +
5.05e-34FFCP PHASE2:Hg19::chr19:34618510..34618515,-#_317393decc1fbac924bfe4c407441940p@chr19:34618510..34618515, -
5.05e-34FFCP PHASE1:Hg19::chr19:34618510..34618515,-#_317393decc1fbac924bfe4c407441940p@chr19:34618510..34618515, -
7.48e-30FFCP PHASE2:Hg19::chr5:54179495..54179507,+#_511d94f0c946759a0bc2e1c99ad2760ep@chr5:54179495..54179507, +
7.48e-30FFCP PHASE1:Hg19::chr1:52629146..52629156,-#_511d94f0c946759a0bc2e1c99ad2760ep1@ENST00000412785
7.48e-30FFCP PHASE1:Hg19::chr6:20402608..20402629,+#_511d94f0c946759a0bc2e1c99ad2760ep13@E2F3
7.48e-30FFCP PHASE2:Hg19::chr1:52629146..52629156,-#_511d94f0c946759a0bc2e1c99ad2760ep1@ENST00000412785
7.48e-30FFCP PHASE2:Hg19::chr6:20402608..20402629,+#_511d94f0c946759a0bc2e1c99ad2760ep13@E2F3
7.48e-30FFCP PHASE1:Hg19::chr6:21665095..21665110,-#_511d94f0c946759a0bc2e1c99ad2760ep@chr6:21665095..21665110, -
7.48e-30FFCP PHASE2:Hg19::chr6:21665095..21665110,-#_511d94f0c946759a0bc2e1c99ad2760ep@chr6:21665095..21665110, -
7.48e-30FFCP PHASE1:Hg19::chr5:54179495..54179507,+#_511d94f0c946759a0bc2e1c99ad2760ep@chr5:54179495..54179507, +
2.37e-29FFCP PHASE1:Hg19::chr6:161454984..161455010,+#_007215f0d1f1bd81740eff1f3e608f18p14@MAP3K4
2.37e-29FFCP PHASE2:Hg19::chr6:161454984..161455010,+#_007215f0d1f1bd81740eff1f3e608f18p14@MAP3K4
2.37e-29FFCP PHASE1:Hg19::chr2:109605543..109605554,-#_007215f0d1f1bd81740eff1f3e608f18p4@EDAR
2.37e-29FFCP PHASE2:Hg19::chr2:109605543..109605554,-#_007215f0d1f1bd81740eff1f3e608f18p4@EDAR
4.2e-29FFCP PHASE1:Hg19::chrX:104100378..104100381,+#_e74369fb21ffd20e5e4a2374deb33b98p@chrX:104100378..104100381, +
4.2e-29FFCP PHASE2:Hg19::chrX:104100378..104100381,+#_e74369fb21ffd20e5e4a2374deb33b98p@chrX:104100378..104100381, +
2.78e-26FFCP PHASE1:Hg19::chr6:21933119..21933123,+#_bce65a9b2fe78ef7d9ed4f422a4aca44p@chr6:21933119..21933123, +
2.78e-26FFCP PHASE2:Hg19::chr6:21933119..21933123,+#_bce65a9b2fe78ef7d9ed4f422a4aca44p@chr6:21933119..21933123, +
2.78e-26FFCP PHASE1:Hg19::chr13:107029084..107029103,+#_bce65a9b2fe78ef7d9ed4f422a4aca44p4@LINC00460
2.78e-26FFCP PHASE2:Hg19::chr13:107029084..107029103,+#_bce65a9b2fe78ef7d9ed4f422a4aca44p4@LINC00460
3.58e-26FFCP PHASE1:Hg19::chr3:104180688..104180692,+#_72d465d3b6c7f7464a0ea7dbf1dd25d9p@chr3:104180688..104180692, +
3.58e-26FFCP PHASE2:Hg19::chr3:104180688..104180692,+#_72d465d3b6c7f7464a0ea7dbf1dd25d9p@chr3:104180688..104180692, +
4.61e-26FFCP PHASE2:Hg19::chr9:93960724..93960730,+#_fd5cb41c5fdfd97b5e51436e5abe36c4p@chr9:93960724..93960730, +
4.61e-26FFCP PHASE1:Hg19::chr15:101418003..101418019,+#_fd5cb41c5fdfd97b5e51436e5abe36c4p5@ALDH1A3
4.61e-26FFCP PHASE2:Hg19::chr15:101418003..101418019,+#_fd5cb41c5fdfd97b5e51436e5abe36c4p5@ALDH1A3
4.61e-26FFCP PHASE1:Hg19::chr1:12239065..12239070,-#_fd5cb41c5fdfd97b5e51436e5abe36c4p@chr1:12239065..12239070, -
4.61e-26FFCP PHASE1:Hg19::chr7:121156367..121156370,-#_fd5cb41c5fdfd97b5e51436e5abe36c4p@chr7:121156367..121156370, -
4.61e-26FFCP PHASE2:Hg19::chr1:12239065..12239070,-#_fd5cb41c5fdfd97b5e51436e5abe36c4p@chr1:12239065..12239070, -
4.61e-26FFCP PHASE2:Hg19::chr7:121156367..121156370,-#_fd5cb41c5fdfd97b5e51436e5abe36c4p@chr7:121156367..121156370, -
4.61e-26FFCP PHASE1:Hg19::chr9:93960724..93960730,+#_fd5cb41c5fdfd97b5e51436e5abe36c4p@chr9:93960724..93960730, +

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0001259&oldid=3277220"