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UBERON:0001737

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Name:larynx
Namespace:FANTOM
Definition:"Heterogeneous cluster that connects the pharynx to the tracheobronchial tree[FMA]." [FMA:55097, Wikipedia:Larynx]
Xrefs:
links:

AAO:0000268
BTO:0001208
EFO:0000838
EHDAA2:0004063
EMAPA:18333
EV:0100039
FMA:55097
GAID:108
galen:Larynx
[1]
MA:0000414
MAT:0000187
MESH:A.04.329
MIAA:0000187
ncithesaurus:Larynx
OpenCyc:Mx4rvViOnZwpEbGdrcN5Y29ycA
SCTID:181212004
VHOG:0001279

XAO:0003081
Comments:This class was created automatically from a combination of ontologies
Alt_id: UBERON:FMA_55097-MA_0000414-MIAA_0000187-XAO_0003081
Subset: uberon_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0000477(anatomical cluster),UBERON:0004119(endoderm-derived structure)
develops_from:UBERON:0008947(respiratory primordium)
part_of:UBERON:0000065(respiratory tract)



Children

derives from:FF:0104978 (HEp-2 cell sample)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

  • 11890-125D9 (Hep-2 cells treated with Streptococci strain 5448, biol_rep1)
  • 11891-125E1 (Hep-2 cells treated with Streptococci strain 5448, biol_rep2)
  • 11892-125E2 (Hep-2 cells treated with Streptococci strain 5448, biol_rep3)
  • 11893-125E3
  • 11894-125E4 (Hep-2 cells treated with Streptococci strain JRS4, biol_rep1)
  • 11895-125E5 (Hep-2 cells treated with Streptococci strain JRS4, biol_rep2)
  • 11896-125E6 (Hep-2 cells treated with Streptococci strain JRS4, biol_rep3)
  • 11897-125E7
  • 11898-125E8 (Hep-2 cells mock treated, biol_rep1)
  • 11899-125E9 (Hep-2 cells mock treated, biol_rep2)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001737 (larynx), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
2.26e-195FFCP PHASE1:Hg19::chr2:233244912..233244922,+#_5335a0e50c3d572fbef1349230bd2924p2@AK297894
2.26e-195FFCP PHASE2:Hg19::chr2:233246932..233246943,+#_5335a0e50c3d572fbef1349230bd2924p6@ALPP
2.26e-195FFCP PHASE1:Hg19::chr2:233246932..233246943,+#_5335a0e50c3d572fbef1349230bd2924p6@ALPP
2.26e-195FFCP PHASE1:Hg19::chr16:87869864..87869878,+#_5335a0e50c3d572fbef1349230bd2924p@chr16:87869864..87869878, +
2.26e-195FFCP PHASE2:Hg19::chr17:79098633..79098647,-#_5335a0e50c3d572fbef1349230bd2924p@chr17:79098633..79098647, -
2.26e-195FFCP PHASE2:Hg19::chr8:128241234..128241241,-#_5335a0e50c3d572fbef1349230bd2924p7@uc003ysb.2
2.26e-195FFCP PHASE2:Hg19::chr2:233246459..233246472,+#_5335a0e50c3d572fbef1349230bd2924p9@ALPP
2.26e-195FFCP PHASE2:Hg19::chr2:233246793..233246841,-#_5335a0e50c3d572fbef1349230bd2924p1@ENST00000441266
2.26e-195FFCP PHASE1:Hg19::chr2:233246459..233246472,+#_5335a0e50c3d572fbef1349230bd2924p9@ALPP
2.26e-195FFCP PHASE2:Hg19::chr2:233244473..233244503,+#_5335a0e50c3d572fbef1349230bd2924p1@AK297894
2.26e-195FFCP PHASE1:Hg19::chr2:233246793..233246841,-#_5335a0e50c3d572fbef1349230bd2924p1@ENST00000441266
2.26e-195FFCP PHASE1:Hg19::chr2:233244473..233244503,+#_5335a0e50c3d572fbef1349230bd2924p1@AK297894
2.26e-195FFCP PHASE1:Hg19::chr17:79098633..79098647,-#_5335a0e50c3d572fbef1349230bd2924p@chr17:79098633..79098647, -
2.26e-195FFCP PHASE2:Hg19::chr16:87869864..87869878,+#_5335a0e50c3d572fbef1349230bd2924p@chr16:87869864..87869878, +
2.26e-195FFCP PHASE2:Hg19::chr2:233244912..233244922,+#_5335a0e50c3d572fbef1349230bd2924p2@AK297894
2.26e-195FFCP PHASE1:Hg19::chr8:128241234..128241241,-#_5335a0e50c3d572fbef1349230bd2924p7@uc003ysb.2
2.87e-176FFCP PHASE2:Hg19::chr8:128265552..128265583,-#_d8c52cce026694d651219f5e28aacbdep@chr8:128265552..128265583, -
2.87e-176FFCP PHASE2:Hg19::chrX:86868675..86868686,+#_d8c52cce026694d651219f5e28aacbdep@chrX:86868675..86868686, +
2.87e-176FFCP PHASE2:Hg19::chr2:233246656..233246666,+#_d8c52cce026694d651219f5e28aacbdep8@ALPP
2.87e-176FFCP PHASE2:Hg19::chr7:54879838..54879849,-#_d8c52cce026694d651219f5e28aacbdep@chr7:54879838..54879849, -
2.87e-176FFCP PHASE1:Hg19::chr2:233246656..233246666,+#_d8c52cce026694d651219f5e28aacbdep8@ALPP
2.87e-176FFCP PHASE1:Hg19::chr8:128265552..128265583,-#_d8c52cce026694d651219f5e28aacbdep@chr8:128265552..128265583, -
2.87e-176FFCP PHASE1:Hg19::chr7:54879838..54879849,-#_d8c52cce026694d651219f5e28aacbdep@chr7:54879838..54879849, -
2.87e-176FFCP PHASE2:Hg19::chr4:123838984..123838995,-#_d8c52cce026694d651219f5e28aacbdep@chr4:123838984..123838995, -
2.87e-176FFCP PHASE1:Hg19::chrX:86868675..86868686,+#_d8c52cce026694d651219f5e28aacbdep@chrX:86868675..86868686, +
2.87e-176FFCP PHASE1:Hg19::chr4:123838984..123838995,-#_d8c52cce026694d651219f5e28aacbdep@chr4:123838984..123838995, -
2.87e-176FFCP PHASE1:Hg19::chr4:134184041..134184064,-#_d8c52cce026694d651219f5e28aacbdep2@ENST00000507172
2.87e-176FFCP PHASE2:Hg19::chr4:134184041..134184064,-#_d8c52cce026694d651219f5e28aacbdep2@ENST00000507172
3.52e-176FFCP PHASE2:Hg19::chr2:233246988..233246995,+#_e7bc3cd678b1d55b46699e6281f6a43dp@chr2:233246988..233246995, +
3.52e-176FFCP PHASE1:Hg19::chr2:233246988..233246995,+#_e7bc3cd678b1d55b46699e6281f6a43dp@chr2:233246988..233246995, +
1.77e-175FFCP PHASE1:Hg19::chr8:128270857..128270869,-#_5413ac4eef2171120a0338b7979f4080p@chr8:128270857..128270869, -
1.77e-175FFCP PHASE2:Hg19::chr8:128270240..128270252,-#_5413ac4eef2171120a0338b7979f4080p@chr8:128270240..128270252, -
1.77e-175FFCP PHASE2:Hg19::chr8:128269736..128269748,-#_5413ac4eef2171120a0338b7979f4080p@chr8:128269736..128269748, -
1.77e-175FFCP PHASE1:Hg19::chr8:128270240..128270252,-#_5413ac4eef2171120a0338b7979f4080p@chr8:128270240..128270252, -
1.77e-175FFCP PHASE2:Hg19::chr8:128270857..128270869,-#_5413ac4eef2171120a0338b7979f4080p@chr8:128270857..128270869, -
1.77e-175FFCP PHASE1:Hg19::chr19:3603296..3603307,+#_5413ac4eef2171120a0338b7979f4080p@chr19:3603296..3603307, +
1.77e-175FFCP PHASE1:Hg19::chr8:128269736..128269748,-#_5413ac4eef2171120a0338b7979f4080p@chr8:128269736..128269748, -
1.77e-175FFCP PHASE2:Hg19::chr19:3603296..3603307,+#_5413ac4eef2171120a0338b7979f4080p@chr19:3603296..3603307, +
9.96e-174FFCP PHASE1:Hg19::chr4:134183951..134183960,-#_69c8395b2cee5d642b2d4f014de09eecp4@ENST00000507172
9.96e-174FFCP PHASE2:Hg19::chr4:134183951..134183960,-#_69c8395b2cee5d642b2d4f014de09eecp4@ENST00000507172
1.23e-160FFCP PHASE2:Hg19::chr11:3147806..3147811,-#_ba2c638bddc166c41c26feccc8f33958p7@OSBPL5
1.23e-160FFCP PHASE1:Hg19::chr11:3147806..3147811,-#_ba2c638bddc166c41c26feccc8f33958p7@OSBPL5
1.23e-160FFCP PHASE1:Hg19::chr1:207262293..207262306,+#_ba2c638bddc166c41c26feccc8f33958p17@C4BPB
1.23e-160FFCP PHASE2:Hg19::chr1:207262293..207262306,+#_ba2c638bddc166c41c26feccc8f33958p17@C4BPB
1.23e-160FFCP PHASE2:Hg19::chr2:233243233..233243245,+#_ba2c638bddc166c41c26feccc8f33958p5@ALPP
1.23e-160FFCP PHASE1:Hg19::chr2:233243233..233243245,+#_ba2c638bddc166c41c26feccc8f33958p5@ALPP
2.57e-160FFCP PHASE1:Hg19::chr11:4154830..4154835,+#_5ccc6a455012eb4c8197320d6bb3dd56p@chr11:4154830..4154835, +
2.57e-160FFCP PHASE2:Hg19::chr11:4154830..4154835,+#_5ccc6a455012eb4c8197320d6bb3dd56p@chr11:4154830..4154835, +
4.46e-160FFCP PHASE1:Hg19::chr8:128433201..128433228,-#_443c1ec521d038baee20b34c8e4ba8efp1@ENST00000501396, p1@ENST00000523825, p1@uc003ysc.1, p1@uc003ysd.1
4.46e-160FFCP PHASE2:Hg19::chr8:128433201..128433228,-#_443c1ec521d038baee20b34c8e4ba8efp1@ENST00000501396, p1@ENST00000523825, p1@uc003ysc.1, p1@uc003ysd.1
6.45e-160FFCP PHASE1:Hg19::chr8:128270900..128270912,-#_e3556bdc15dc8c228fd6c156e8dbbc38p@chr8:128270900..128270912, -
6.45e-160FFCP PHASE2:Hg19::chr8:128270900..128270912,-#_e3556bdc15dc8c228fd6c156e8dbbc38p@chr8:128270900..128270912, -
7.75e-160FFCP PHASE2:Hg19::chr4:173884019..173884038,+#_f8a288bf8ef945d17c4ce2b9bace110ep@chr4:173884019..173884038, +
7.75e-160FFCP PHASE1:Hg19::chr4:173884019..173884038,+#_f8a288bf8ef945d17c4ce2b9bace110ep@chr4:173884019..173884038, +
1.12e-159FFCP PHASE2:Hg19::chr4:173883984..173884005,+#_6a7707e598db603939b3ee31c7db8646p@chr4:173883984..173884005, +
1.12e-159FFCP PHASE1:Hg19::chr4:173883984..173884005,+#_6a7707e598db603939b3ee31c7db8646p@chr4:173883984..173884005, +
1.94e-159FFCP PHASE2:Hg19::chr2:10529417..10529422,+#_993c9e4302f3d8695c8f2f5cfc6273aap@chr2:10529417..10529422, +
1.94e-159FFCP PHASE1:Hg19::chr2:10529417..10529422,+#_993c9e4302f3d8695c8f2f5cfc6273aap@chr2:10529417..10529422, +
8.17e-155FFCP PHASE2:Hg19::chr2:53732986..53732989,-#_12626b5c202a46d180d20a0103cbcbb7p@chr2:53732986..53732989, -
8.17e-155FFCP PHASE1:Hg19::chr2:53732986..53732989,-#_12626b5c202a46d180d20a0103cbcbb7p@chr2:53732986..53732989, -
9.97e-155FFCP PHASE2:Hg19::chr2:233246589..233246598,+#_a147c73fc218907a5747800c9cbbc5b5p12@ALPP
9.97e-155FFCP PHASE1:Hg19::chr2:233246589..233246598,+#_a147c73fc218907a5747800c9cbbc5b5p12@ALPP
1.22e-154FFCP PHASE1:Hg19::chr16:87874486..87874492,-#_614f5b65bb678aa09a279f35b57782d9p@chr16:87874486..87874492, -
1.22e-154FFCP PHASE2:Hg19::chr16:87874486..87874492,-#_614f5b65bb678aa09a279f35b57782d9p@chr16:87874486..87874492, -
4.02e-154FFCP PHASE2:Hg19::chr8:128270948..128270958,-#_c3261f3e2cbd239136fea4386e9b7d26p@chr8:128270948..128270958, -
4.02e-154FFCP PHASE1:Hg19::chr5:370156..370169,+#_c3261f3e2cbd239136fea4386e9b7d26p@chr5:370156..370169, +
4.02e-154FFCP PHASE1:Hg19::chr8:128270948..128270958,-#_c3261f3e2cbd239136fea4386e9b7d26p@chr8:128270948..128270958, -
4.02e-154FFCP PHASE2:Hg19::chr5:370156..370169,+#_c3261f3e2cbd239136fea4386e9b7d26p@chr5:370156..370169, +
3.95e-152FFCP PHASE1:Hg19::chr16:87869840..87869849,+#_38471b6084eef96fc4d508af99cda1cep@chr16:87869840..87869849, +
3.95e-152FFCP PHASE1:Hg19::chr9:84380797..84380800,+#_38471b6084eef96fc4d508af99cda1cep@chr9:84380797..84380800, +
3.95e-152FFCP PHASE2:Hg19::chr2:233246442..233246451,+#_38471b6084eef96fc4d508af99cda1cep16@ALPP
3.95e-152FFCP PHASE1:Hg19::chr2:233246442..233246451,+#_38471b6084eef96fc4d508af99cda1cep16@ALPP
3.95e-152FFCP PHASE2:Hg19::chr9:84380797..84380800,+#_38471b6084eef96fc4d508af99cda1ce+, p@chr9:84380797..84380800
3.95e-152FFCP PHASE2:Hg19::chr16:87869840..87869849,+#_38471b6084eef96fc4d508af99cda1ce+, p@chr16:87869840..87869849
1.31e-147FFCP PHASE1:Hg19::chr2:233246828..233246839,+#_46e72dcb6c299b91a6a1e787bac6fd74p4@ALPP
1.31e-147FFCP PHASE2:Hg19::chr2:233243964..233243976,+#_46e72dcb6c299b91a6a1e787bac6fd74p@chr2:233243964..233243976, +
1.31e-147FFCP PHASE1:Hg19::chr5:147582537..147582549,+#_46e72dcb6c299b91a6a1e787bac6fd74p4@SPINK6
1.31e-147FFCP PHASE2:Hg19::chr5:147582537..147582549,+#_46e72dcb6c299b91a6a1e787bac6fd74p4@SPINK6
1.31e-147FFCP PHASE1:Hg19::chr2:233243964..233243976,+#_46e72dcb6c299b91a6a1e787bac6fd74p@chr2:233243964..233243976, +
1.31e-147FFCP PHASE2:Hg19::chr17:9745568..9745583,+#_46e72dcb6c299b91a6a1e787bac6fd74p8@GLP2R
1.31e-147FFCP PHASE1:Hg19::chr17:9745568..9745583,+#_46e72dcb6c299b91a6a1e787bac6fd74p8@GLP2R
1.31e-147FFCP PHASE2:Hg19::chr2:233246828..233246839,+#_46e72dcb6c299b91a6a1e787bac6fd74p4@ALPP
1.56e-147FFCP PHASE1:Hg19::chr8:128231456..128231465,-#_df662a21fb23a7555c9efc2c37433b0ap13@ENST00000500112, p13@uc003ysa.1
1.56e-147FFCP PHASE2:Hg19::chr8:128231456..128231465,-#_df662a21fb23a7555c9efc2c37433b0ap13@ENST00000500112, p13@uc003ysa.1
1.84e-147FFCP PHASE2:Hg19::chr1:207262478..207262493,+#_51319a2f977ddc73dceb4277672d5c55p14@C4BPB
1.84e-147FFCP PHASE1:Hg19::chr1:207262478..207262493,+#_51319a2f977ddc73dceb4277672d5c55p14@C4BPB
3.06e-147FFCP PHASE2:Hg19::chr2:233321333..233321358,+#_e43ac97a08ad7e3300b6d3886777d4c7p@chr2:233321333..233321358, +
3.06e-147FFCP PHASE2:Hg19::chr2:233324211..233324229,-#_e43ac97a08ad7e3300b6d3886777d4c7-, p@chr2:233324211..233324229
3.06e-147FFCP PHASE1:Hg19::chr2:233321333..233321358,+#_e43ac97a08ad7e3300b6d3886777d4c7p@chr2:233321333..233321358, +
3.06e-147FFCP PHASE1:Hg19::chr2:233324211..233324229,-#_e43ac97a08ad7e3300b6d3886777d4c7p@chr2:233324211..233324229, -
3.62e-147FFCP PHASE1:Hg19::chr2:211427642..211427670,+#_961ccb87c70be99555e3d74e13fdba53p@chr2:211427642..211427670, +
3.62e-147FFCP PHASE2:Hg19::chr2:211427642..211427670,+#_961ccb87c70be99555e3d74e13fdba53p@chr2:211427642..211427670, +
4.28e-147FFCP PHASE1:Hg19::chr12:51923800..51923807,+#_b655998afe5ccc72fa1f9279338f9209p@chr12:51923800..51923807, +
4.28e-147FFCP PHASE2:Hg19::chr12:51923800..51923807,+#_b655998afe5ccc72fa1f9279338f9209p@chr12:51923800..51923807, +
6.0e-147FFCP PHASE2:Hg19::chr7:54879745..54879759,-#_2ca62294d9adfa4ee8403d562666c400p@chr7:54879745..54879759, -
6.0e-147FFCP PHASE1:Hg19::chr7:54879745..54879759,-#_2ca62294d9adfa4ee8403d562666c400p@chr7:54879745..54879759, -
3.23e-146FFCP PHASE2:Hg19::chr4:24322838..24322853,-#_e728b4221a410eec941f2bac9e23e3b5p@chr4:24322838..24322853, -
3.23e-146FFCP PHASE1:Hg19::chr4:24322838..24322853,-#_e728b4221a410eec941f2bac9e23e3b5p@chr4:24322838..24322853, -
3.82e-146FFCP PHASE2:Hg19::chr6:64282122..64282131,+#_775a1a8ae43638bfc2baf86a779281d4p40@PTP4A1
3.82e-146FFCP PHASE1:Hg19::chr6:64282122..64282131,+#_775a1a8ae43638bfc2baf86a779281d4p40@PTP4A1










Property "Property value" (as page type) with input value "UBPROP:0000001 "Anatomical structure consisting of a narrowly triangular chamber supported by a series of semicircular cartilages in which part of the sound-production system is located.[AAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.