UBERON:0001986: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{UBERON
|id=UBERON:0001986
|name=endothelium
|namespace=
|def="A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endotheli...") |
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|is_a=UBERON:0000487 | |is_a=UBERON:0000487 | ||
|synonym= | |synonym= | ||
|comment=The term | |comment=The term 窶倪�脇ndothelium窶吮�� has been either restricted to the continuous cell layer of the vertebrates, as we are assuming here, or applied to all the cells able to adhere to the luminal surface of the vascular basement membrane (Casley-Smith 1980) | ||
|alt_id=UBERON:FMA_63916-ZFA_0001639 | |alt_id=UBERON:FMA_63916-ZFA_0001639 | ||
|disjoint_from= | |disjoint_from= | ||
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|part_of= | |part_of= | ||
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | |property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl | ||
|is_obsolete= | |||
|preceded_by= | |||
}} | }} | ||
Revision as of 17:14, 15 June 2012
| Name: | endothelium | ||
|---|---|---|---|
| Definition: | "A layer of epithelium that lines the heart, blood vessels (endothelium, vascular), lymph vessels (endothelium, lymphatic), and the serous cavities of the body[MESH]. Simple squamous epithelium which lines blood and lymphatic vessels and the heart[FMA]" [FMA:63916, MESH:A.10.272.491] | ||
| Xrefs: |
| ||
| Comments: | The term 窶倪�脇ndothelium窶吮�� has been either restricted to the continuous cell layer of the vertebrates, as we are assuming here, or applied to all the cells able to adhere to the luminal surface of the vascular basement membrane (Casley-Smith 1980) | ||
| Alt_id: | UBERON:FMA_63916-ZFA_0001639 | ||
| Subset: | uberon_slim |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0000487(simple squamous epithelium) |
|---|
Children
| is a: | UBERON:0003915 (endothelial tube),UBERON:0004852 (cardiovascular system endothelium) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Human (Homo sapiens)
- 11207-116A1 (Endothelial Cells - Aortic, donor0)
- 11243-116E1 (Endothelial Cells - Umbilical vein, donor1)
- 11263-116G3 (Endothelial Cells - Aortic, donor1)
- 11264-116G4 (Endothelial Cells - Artery, donor1)
- 11265-116G5 (Endothelial Cells - Microvascular, donor1)
- 11266-116G6 (Endothelial Cells - Thoracic, donor1)
- 11267-116G7 (Endothelial Cells - Vein, donor1)
- 11324-117E1 (Endothelial Cells - Umbilical vein, donor2)
- 11340-117F8 (Endothelial Cells - Aortic, donor2)
- 11341-117F9 (Endothelial Cells - Artery, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001986 (endothelium), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 8.63e-150 | FFCP PHASE2:Hg19::chr18:33046982..33046991,-#_d11ddd0785eae474ebe3fb918fe6ce2b | p@chr18:33046982..33046991, - |
| 8.63e-150 | FFCP PHASE1:Hg19::chr18:33046982..33046991,-#_d11ddd0785eae474ebe3fb918fe6ce2b | p@chr18:33046982..33046991, - |
| 2.4e-126 | FFCP PHASE2:Hg19::chr2:56216687..56216727,-#_aca5bf0f49198c3d314f0ea2d526bdd3 | p1@MIR216A |
| 2.4e-126 | FFCP PHASE1:Hg19::chr2:56216687..56216727,-#_aca5bf0f49198c3d314f0ea2d526bdd3 | p1@MIR216A |
| 1.75e-121 | FFCP PHASE2:Hg19::chr6:78171774..78171792,+#_4c8b7345cace8f148f41f6610acd01d4 | p@chr6:78171774..78171792, + |
| 1.75e-121 | FFCP PHASE1:Hg19::chr6:78171774..78171792,+#_4c8b7345cace8f148f41f6610acd01d4 | p@chr6:78171774..78171792, + |
| 2.8e-121 | FFCP PHASE2:Hg19::chr18:33047157..33047168,-#_f7195cf5e8af065977fde63212622f10 | p@chr18:33047157..33047168, - |
| 2.8e-121 | FFCP PHASE1:Hg19::chr18:33047157..33047168,-#_f7195cf5e8af065977fde63212622f10 | p@chr18:33047157..33047168, - |
| 2.32e-119 | FFCP PHASE2:Hg19::chr7:139741849..139741879,-#_722392d1a36d17936b6fcc3d2b80e002 | p12@PARP12 |
| 2.32e-119 | FFCP PHASE1:Hg19::chr7:139741849..139741879,-#_722392d1a36d17936b6fcc3d2b80e002 | p12@PARP12 |
| 3.95e-117 | FFCP PHASE2:Hg19::chr7:139741594..139741615,-#_215a89f9f7ecb36d5f951913509bc271 | p5@PARP12 |
| 3.95e-117 | FFCP PHASE1:Hg19::chr7:139741594..139741615,-#_215a89f9f7ecb36d5f951913509bc271 | p5@PARP12 |
| 1.12e-116 | FFCP PHASE1:Hg19::chr12:118112251..118112272,-#_24a50986bc8c020bb28593d734158966 | p12@KSR2 |
| 1.12e-116 | FFCP PHASE2:Hg19::chr12:118112251..118112272,-#_24a50986bc8c020bb28593d734158966 | p12@KSR2 |
| 4.37e-116 | FFCP PHASE2:Hg19::chr3:43538305..43538325,-#_6fa6fee502e14b672cc260f306ac4cb5 | p@chr3:43538305..43538325, - |
| 4.37e-116 | FFCP PHASE1:Hg19::chr3:43538305..43538325,-#_6fa6fee502e14b672cc260f306ac4cb5 | p@chr3:43538305..43538325, - |
| 6.53e-113 | FFCP PHASE1:Hg19::chrX:71299684..71299699,+#_99dc11652efda7c76e3f90109642fa12 | p@chrX:71299684..71299699, + |
| 6.53e-113 | FFCP PHASE2:Hg19::chrX:71299684..71299699,+#_99dc11652efda7c76e3f90109642fa12 | p@chrX:71299684..71299699, + |
| 2.12e-108 | FFCP PHASE1:Hg19::chr10:50153703..50153720,+#_7c6dfc65bb86992d46a2dde695573c4f | p7@WDFY4 |
| 2.12e-108 | FFCP PHASE2:Hg19::chr10:50153703..50153720,+#_7c6dfc65bb86992d46a2dde695573c4f | p7@WDFY4 |
| 3.85e-107 | FFCP PHASE2:Hg19::chr10:50153735..50153750,+#_b24f2d4ba8ba83775be316d6e8323940 | p6@WDFY4 |
| 3.85e-107 | FFCP PHASE1:Hg19::chr10:50153735..50153750,+#_b24f2d4ba8ba83775be316d6e8323940 | p6@WDFY4 |
| 3.44e-106 | FFCP PHASE2:Hg19::chrX:15518894..15518905,+#_03844238d9fc3196f58b83411b643e1b | p2@BMX |
| 3.44e-106 | FFCP PHASE1:Hg19::chrX:15518894..15518905,+#_03844238d9fc3196f58b83411b643e1b | p2@BMX |
| 1.68e-105 | FFCP PHASE2:Hg19::chr6:3753188..3753192,-#_eeb8c04e9f18edad503088b88a203f2e | p@chr6:3753188..3753192, - |
| 1.68e-105 | FFCP PHASE1:Hg19::chr6:3753188..3753192,-#_eeb8c04e9f18edad503088b88a203f2e | p@chr6:3753188..3753192, - |
| 3.71e-103 | FFCP PHASE1:Hg19::chr5:95920642..95920681,+#_7b26385262daa7984956eca164dc08a8 | p1@ENST00000513158 |
| 3.71e-103 | FFCP PHASE2:Hg19::chr5:95920642..95920681,+#_7b26385262daa7984956eca164dc08a8 | p1@ENST00000513158 |
| 8.1e-103 | FFCP PHASE1:Hg19::chr10:99655692..99655725,-#_19218c16f0edae85e438d2271d3a49b3 | p@chr10:99655692..99655725, - |
| 8.1e-103 | FFCP PHASE2:Hg19::chr10:99655692..99655725,-#_19218c16f0edae85e438d2271d3a49b3 | p@chr10:99655692..99655725, - |
| 1.53e-102 | FFCP PHASE2:Hg19::chr7:150329732..150329739,-#_b60392d795f7d357269ebfe238b7c1f6 | p8@GIMAP6 |
| 1.53e-102 | FFCP PHASE1:Hg19::chr7:150329732..150329739,-#_b60392d795f7d357269ebfe238b7c1f6 | p8@GIMAP6 |
| 3.68e-102 | FFCP PHASE1:Hg19::chr14:75469820..75469826,+#_9ba249d71e7d1b4dff4788964a86f488 | p4@EIF2B2 |
| 3.68e-102 | FFCP PHASE2:Hg19::chr14:75469820..75469826,+#_9ba249d71e7d1b4dff4788964a86f488 | p4@EIF2B2 |
| 4.84e-102 | FFCP PHASE2:Hg19::chr6:78171746..78171769,+#_334964dbc497c0de2c359f6cd1040777 | p@chr6:78171746..78171769, + |
| 4.84e-102 | FFCP PHASE1:Hg19::chr6:78171746..78171769,+#_334964dbc497c0de2c359f6cd1040777 | p@chr6:78171746..78171769, + |
| 2.83e-101 | FFCP PHASE2:Hg19::chr6:148664333..148664338,-#_698b8809d1051f3082dffbe1c9196070 | p@chr6:148664333..148664338, - |
| 2.83e-101 | FFCP PHASE1:Hg19::chr6:148664333..148664338,-#_698b8809d1051f3082dffbe1c9196070 | p@chr6:148664333..148664338, - |
| 1.76e-99 | FFCP PHASE1:Hg19::chr14:38725228..38725236,-#_e9f130e4399a3da24bb92823d35a32ac | p5@CLEC14A |
| 1.76e-99 | FFCP PHASE2:Hg19::chr14:38725228..38725236,-#_e9f130e4399a3da24bb92823d35a32ac | p5@CLEC14A |
| 5.12e-99 | FFCP PHASE2:Hg19::chr5:34656634..34656645,+#_7eb4c076e860f8977ba372aefa0bf58f | p15@RAI14 |
| 5.12e-99 | FFCP PHASE1:Hg19::chr5:34656634..34656645,+#_7eb4c076e860f8977ba372aefa0bf58f | p15@RAI14 |
| 3.9e-98 | FFCP PHASE2:Hg19::chr17:62084108..62084111,-#_1e2e3130d898c5a442f1cd1fb45eae51 | p5@ICAM2 |
| 3.9e-98 | FFCP PHASE1:Hg19::chr17:62084108..62084111,-#_1e2e3130d898c5a442f1cd1fb45eae51 | p5@ICAM2 |
| 1.28e-97 | FFCP PHASE2:Hg19::chr4:145566874..145566889,+#_a558623dbcc46dae1bfaac9f71374298 | p15@HHIP |
| 1.28e-97 | FFCP PHASE1:Hg19::chr4:145566874..145566889,+#_a558623dbcc46dae1bfaac9f71374298 | p15@HHIP |
| 1.51e-97 | FFCP PHASE2:Hg19::chr9:139563124..139563129,+#_cb518860df52feeee33b61ec0191f4d4 | p@chr9:139563124..139563129, + |
| 1.51e-97 | FFCP PHASE1:Hg19::chr9:139563124..139563129,+#_cb518860df52feeee33b61ec0191f4d4 | p@chr9:139563124..139563129, + |
| 5.66e-97 | FFCP PHASE2:Hg19::chr7:150690812..150690817,+#_6c3cbc06b3ddcd810ef2886bf78bc257 | p10@NOS3 |
| 5.66e-97 | FFCP PHASE1:Hg19::chr7:150690812..150690817,+#_6c3cbc06b3ddcd810ef2886bf78bc257 | p10@NOS3 |
| 1.44e-96 | FFCP PHASE2:Hg19::chr5:176433333..176433349,-#_51d0124acf01153e91556dda22839ce5 | p11@UIMC1 |
| 1.44e-96 | FFCP PHASE1:Hg19::chr5:176433333..176433349,-#_51d0124acf01153e91556dda22839ce5 | p11@UIMC1 |
| 3.94e-95 | FFCP PHASE1:Hg19::chr14:38725249..38725254,-#_1b333933408c3541d55e54ada9914f81 | p6@CLEC14A |
| 3.94e-95 | FFCP PHASE2:Hg19::chr14:38725249..38725254,-#_1b333933408c3541d55e54ada9914f81 | p6@CLEC14A |
| 4.62e-95 | FFCP PHASE1:Hg19::chr11:124761247..124761258,-#_7cc47f9def20a37d59d615fa3140f170 | p@chr11:124761247..124761258, - |
| 4.62e-95 | FFCP PHASE2:Hg19::chr11:124761247..124761258,-#_7cc47f9def20a37d59d615fa3140f170 | p@chr11:124761247..124761258, - |
| 6.81e-95 | FFCP PHASE2:Hg19::chr1:22264210..22264241,+#_711402ef62e4064aced78be014859741 | p@chr1:22264210..22264241, + |
| 6.81e-95 | FFCP PHASE1:Hg19::chr1:22264210..22264241,+#_711402ef62e4064aced78be014859741 | p@chr1:22264210..22264241, + |
| 5.14e-93 | FFCP PHASE1:Hg19::chr9:139543445..139543462,+#_b9fd413e305bae5aa478b511dd040b0b | p@chr9:139543445..139543462, + |
| 5.14e-93 | FFCP PHASE2:Hg19::chr9:139543445..139543462,+#_b9fd413e305bae5aa478b511dd040b0b | p@chr9:139543445..139543462, + |
| 3.62e-92 | FFCP PHASE2:Hg19::chr13:32835894..32835907,+#_54d24037809b48ef786c249ed70ca4a4 | p@chr13:32835894..32835907, + |
| 3.62e-92 | FFCP PHASE1:Hg19::chr13:32835894..32835907,+#_54d24037809b48ef786c249ed70ca4a4 | p@chr13:32835894..32835907, + |
| 6.53e-92 | FFCP PHASE2:Hg19::chr9:139541134..139541139,+#_e55e3e6ce12952a796f0363bf78a0d72 | p@chr9:139541134..139541139, + |
| 6.53e-92 | FFCP PHASE1:Hg19::chr9:139541134..139541139,+#_e55e3e6ce12952a796f0363bf78a0d72 | p@chr9:139541134..139541139, + |
| 8.31e-92 | FFCP PHASE2:Hg19::chr12:105863705..105863718,+#_4e20c6b00ce05c32409f11ee5b2b23d3 | p@chr12:105863705..105863718, + |
| 8.31e-92 | FFCP PHASE1:Hg19::chr12:105863705..105863718,+#_4e20c6b00ce05c32409f11ee5b2b23d3 | p@chr12:105863705..105863718, + |
| 1.78e-91 | FFCP PHASE1:Hg19::chr19:41985048..41985050,-#_20a5397a1e41d649ef6aae9ab9c4eff9 | p@chr19:41985048..41985050, - |
| 1.78e-91 | FFCP PHASE2:Hg19::chr19:41985048..41985050,-#_20a5397a1e41d649ef6aae9ab9c4eff9 | p@chr19:41985048..41985050, - |
| 1.27e-90 | FFCP PHASE1:Hg19::chr12:105863636..105863650,+#_16c37834066b5c3d5ef520c1fa314903 | p@chr12:105863636..105863650, + |
| 1.27e-90 | FFCP PHASE2:Hg19::chr12:105863636..105863650,+#_16c37834066b5c3d5ef520c1fa314903 | p@chr12:105863636..105863650, + |
| 4.84e-90 | FFCP PHASE2:Hg19::chr16:2220383..2220402,+#_2699ff1aaf799ac0506ed68c80304db5 | p@chr16:2220383..2220402, + |
| 4.84e-90 | FFCP PHASE1:Hg19::chr16:2220383..2220402,+#_2699ff1aaf799ac0506ed68c80304db5 | p@chr16:2220383..2220402, + |
| 4.93e-90 | FFCP PHASE2:Hg19::chr9:139543390..139543404,+#_6558f572fa3df7813c0cc29dc185e715 | p@chr9:139543390..139543404, + |
| 4.93e-90 | FFCP PHASE1:Hg19::chr9:139543390..139543404,+#_6558f572fa3df7813c0cc29dc185e715 | p@chr9:139543390..139543404, + |
| 2.05e-88 | FFCP PHASE1:Hg19::chr10:129785574..129785580,+#_3c83538b19b0d0984f78b90e271361e8 | p14@PTPRE |
| 2.05e-88 | FFCP PHASE2:Hg19::chr10:129785574..129785580,+#_3c83538b19b0d0984f78b90e271361e8 | p14@PTPRE |
| 2.37e-88 | FFCP PHASE2:Hg19::chr13:32835912..32835936,+#_bd3452529e75ba60c5635c3e8b9c3949 | p@chr13:32835912..32835936, + |
| 2.37e-88 | FFCP PHASE1:Hg19::chr13:32835912..32835936,+#_bd3452529e75ba60c5635c3e8b9c3949 | p@chr13:32835912..32835936, + |
| 3.48e-88 | FFCP PHASE1:Hg19::chr6:11607864..11607875,+#_cdb09a34e22207c40e0b3d20acfbd974 | p@chr6:11607864..11607875, + |
| 3.48e-88 | FFCP PHASE2:Hg19::chr6:11607864..11607875,+#_cdb09a34e22207c40e0b3d20acfbd974 | p@chr6:11607864..11607875, + |
| 8.3e-88 | FFCP PHASE2:Hg19::chr1:16076122..16076138,-#_598c8f699021c8d4814c03cef69a5e58 | p1@ENST00000418525 |
| 8.3e-88 | FFCP PHASE1:Hg19::chr1:16076122..16076138,-#_598c8f699021c8d4814c03cef69a5e58 | p1@ENST00000418525 |
| 1.93e-87 | FFCP PHASE2:Hg19::chr12:96830523..96830532,+#_33348721488447935b6630ff7c77bed9 | p@chr12:96830523..96830532, + |
| 1.93e-87 | FFCP PHASE1:Hg19::chr12:96830523..96830532,+#_33348721488447935b6630ff7c77bed9 | p@chr12:96830523..96830532, + |
| 3.38e-87 | FFCP PHASE2:Hg19::chr12:12491541..12491552,-#_191f8a9a2d08d42c6581d394d7470678 | p11@MANSC1 |
| 3.38e-87 | FFCP PHASE1:Hg19::chr12:12491541..12491552,-#_191f8a9a2d08d42c6581d394d7470678 | p11@MANSC1 |
| 3.45e-85 | FFCP PHASE2:Hg19::chr18:33047117..33047138,-#_3dd2f061807adda02ac8db9dcf628eb8 | p@chr18:33047117..33047138, - |
| 3.45e-85 | FFCP PHASE1:Hg19::chr18:33047117..33047138,-#_3dd2f061807adda02ac8db9dcf628eb8 | p@chr18:33047117..33047138, - |
| 4.2e-85 | FFCP PHASE2:Hg19::chr18:33047076..33047099,-#_469a86368067485b800dc98498ef6c5d | p@chr18:33047076..33047099, - |
| 4.2e-85 | FFCP PHASE1:Hg19::chr18:33047076..33047099,-#_469a86368067485b800dc98498ef6c5d | p@chr18:33047076..33047099, - |
| 1.18e-84 | FFCP PHASE2:Hg19::chr1:28785607..28785624,+#_b16803bc4f97fde864036b5e64f29dc9 | p@chr1:28785607..28785624, + |
| 1.18e-84 | FFCP PHASE1:Hg19::chr1:28785607..28785624,+#_b16803bc4f97fde864036b5e64f29dc9 | p@chr1:28785607..28785624, + |
| 1.82e-84 | FFCP PHASE2:Hg19::chr3:58034268..58034295,+#_1e6be5fdd375a93817d0dd09651df9bf | p@chr3:58034268..58034295, + |
| 1.82e-84 | FFCP PHASE1:Hg19::chr3:58034268..58034295,+#_1e6be5fdd375a93817d0dd09651df9bf | p@chr3:58034268..58034295, + |
| 3.24e-84 | FFCP PHASE1:Hg19::chr15:39423060..39423066,+#_ecec7dcfe9d210254ed7f7dfd8d36f43 | p@chr15:39423060..39423066, + |
| 3.24e-84 | FFCP PHASE2:Hg19::chr15:39423060..39423066,+#_ecec7dcfe9d210254ed7f7dfd8d36f43 | p@chr15:39423060..39423066, + |
| 1.28e-80 | FFCP PHASE2:Hg19::chr2:225266779..225266786,-#_1b75e5c7c8c564063bbf33ea5bbfa054 | p4@FAM124B |
| 1.28e-80 | FFCP PHASE1:Hg19::chr2:225266779..225266786,-#_1b75e5c7c8c564063bbf33ea5bbfa054 | p4@FAM124B |
| 3.03e-80 | FFCP PHASE2:Hg19::chr17:47287786..47287797,+#_5e7fa68b19b39d713b4215f303c1aaa0 | p4@ABI3 |
| 3.03e-80 | FFCP PHASE1:Hg19::chr17:47287786..47287797,+#_5e7fa68b19b39d713b4215f303c1aaa0 | p4@ABI3 |
