UBERON:0002256: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 13: | Line 13: | ||
|located_in= | |located_in= | ||
|name=dorsal horn of spinal cord | |name=dorsal horn of spinal cord | ||
|namespace= | |namespace=FANTOM | ||
|obo_creation_date= | |obo_creation_date= | ||
|part_of=UBERON:0002315 | |part_of=UBERON:0002315 | ||
Latest revision as of 17:28, 12 September 2014
| Name: | dorsal horn of spinal cord | ||
|---|---|---|---|
| Namespace: | FANTOM | ||
| Definition: | "the pronounced, dorsolaterally oriented ridge of grey matter in each lateral half of the spinal cord[MP]. the dorsal (more towards the back) grey matter of the spinal cord. It receives several types of sensory information from the body, including light touch, proprioception, and vibration. This information is sent from receptors of the skin, bones, and joints through sensory neurons whose cell bodies lie in the dorsal root ganglion[WP]. The dorsal region of the mature spinal cord contains neurons that process and relay sensory input[GO]." [GO:0021516, MP:0006282, Wikipedia:Posterior_horn_of_spinal_cord] | ||
| Xrefs: |
| ||
| Synonyms: |
"cornu dorsale" EXACT [ZFA:0000649] "cornu posterius medullae spinalis" RELATED LATIN [Wikipedia:Posterior_horn_of_spinal_cord] "dorsal gray column of spinal cord" EXACT [FMA:256530] "dorsal gray horn" EXACT [NIF_GrossAnatomy:birnlex_2667] "dorsal gray matter of spinal cord" EXACT [FMA:256530] "dorsal grey column of spinal cord" EXACT [] "dorsal horn" EXACT [ZFA:0000649] "dorsal horn spinal cord" EXACT [ZFA:0000649] "dorsal region of mature spinal cord" EXACT [] "dorsal region of spinal cord" EXACT [] "dorsal spinal cord" EXACT [] "posterior gray column of spinal cord" EXACT [FMA:256530] "posterior gray horn of spinal cord" EXACT [FMA:256530] "posterior grey column of spinal cord" EXACT [] "posterior horn of spinal cord" EXACT [Wikipedia:Posterior_horn_of_spinal_cord] "spinal cord dorsal horn" EXACT [] "spinal cord posterior horn" EXACT [NIF_GrossAnatomy:birnlex_2667] | ||
| Comments: | This class was created automatically from a combination of ontologies | ||
| Alt_id: | UBERON:FMA_77405-MA_0001119 | ||
| Subset: | vertebrate_core |
200px-Medulla_spinalis_-_Section_-_English.svg.png]
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
| is_a: | UBERON:0015212(lateral structure),UBERON:0016550(spinal cord column) |
|---|---|
| part_of: | UBERON:0002315(gray matter of spinal cord) |
Children
| part of: | CL:0002611 (neuron of the dorsal spinal cord) |
|---|
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 11643-122D5 (Mouse Neurons - dorsal spinal cord, donor3)
- 11720-123D1 (Mouse Neurons - dorsal spinal cord, donor1)
- 11738-123F1 (Mouse Neurons - dorsal spinal cord, donor2)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002256 (dorsal horn of spinal cord), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
| P-value | FFCP | Short description |
|---|---|---|
| 1.66e-44 | FFCP PHASE2:Mm9::chr1:173090774..173090783,+#_807ad7edd5145adc27e7c34ef9056bf4 | p@chr1:173090774..173090783, + |
| 1.66e-44 | FFCP PHASE1:Mm9::chr1:173090774..173090783,+#_807ad7edd5145adc27e7c34ef9056bf4 | p@chr1:173090774..173090783, + |
| 1.42e-35 | FFCP PHASE2:Mm9::chr7:30089029..30089032,+#_fcd67e5d18446535ecf97d1bec986c69 | p10@Dpf1 |
| 1.42e-35 | FFCP PHASE1:Mm9::chr11:96608388..96608420,+#_fcd67e5d18446535ecf97d1bec986c69 | p@chr11:96608388..96608420, + |
| 1.42e-35 | FFCP PHASE2:Mm9::chr11:96608388..96608420,+#_fcd67e5d18446535ecf97d1bec986c69 | p@chr11:96608388..96608420, + |
| 1.42e-35 | FFCP PHASE1:Mm9::chr7:30089029..30089032,+#_fcd67e5d18446535ecf97d1bec986c69 | p10@Dpf1 |
| 2.13e-35 | FFCP PHASE1:Mm9::chr18:84268738..84268777,-#_31b3a08726633717cca90b35f06fe886 | p@chr18:84268738..84268777, - |
| 2.13e-35 | FFCP PHASE2:Mm9::chr18:84268738..84268777,-#_31b3a08726633717cca90b35f06fe886 | p@chr18:84268738..84268777, - |
| 2.13e-35 | FFCP PHASE2:Mm9::chr14:33413108..33413118,+#_31b3a08726633717cca90b35f06fe886 | p3@Prrxl1 |
| 2.13e-35 | FFCP PHASE1:Mm9::chr14:33413108..33413118,+#_31b3a08726633717cca90b35f06fe886 | p3@Prrxl1 |
| 4.75e-35 | FFCP PHASE1:Mm9::chr2:70053872..70053879,+#_d933168e87e10ca40c0b683cb82a8bff | p@chr2:70053872..70053879, + |
| 4.75e-35 | FFCP PHASE2:Mm9::chr2:70053872..70053879,+#_d933168e87e10ca40c0b683cb82a8bff | p@chr2:70053872..70053879, + |
| 3.41e-30 | FFCP PHASE2:Mm9::chr15:102821294..102821313,+#_9c8563b9e23952ac793d18acf721fed0 | p@chr15:102821294..102821313, + |
| 3.41e-30 | FFCP PHASE1:Mm9::chr15:102821294..102821313,+#_9c8563b9e23952ac793d18acf721fed0 | p@chr15:102821294..102821313, + |
| 6.69e-30 | FFCP PHASE2:Mm9::chr3:10183923..10183927,-#_5137afc9fe072c9087f34e76964da36e | p3@Pmp2 |
| 6.69e-30 | FFCP PHASE1:Mm9::chr4:137573261..137573269,+#_5137afc9fe072c9087f34e76964da36e | p@chr4:137573261..137573269, + |
| 6.69e-30 | FFCP PHASE1:Mm9::chr3:10183923..10183927,-#_5137afc9fe072c9087f34e76964da36e | p3@Pmp2 |
| 6.69e-30 | FFCP PHASE2:Mm9::chr4:137573261..137573269,+#_5137afc9fe072c9087f34e76964da36e | p@chr4:137573261..137573269, + |
| 2.55e-29 | FFCP PHASE1:Mm9::chr11:96143545..96143556,+#_1c3d2934591915c26f4a1e266dfb1842 | p6@Hoxb8 |
| 2.55e-29 | FFCP PHASE2:Mm9::chr11:96143545..96143556,+#_1c3d2934591915c26f4a1e266dfb1842 | p6@Hoxb8 |
| 2.38e-26 | FFCP PHASE2:Mm9::chr11:58996296..58996303,-#_06e329b0f7408e06ad5263753fa3233d | p3@Gjc2 |
| 2.38e-26 | FFCP PHASE1:Mm9::chr11:58996296..58996303,-#_06e329b0f7408e06ad5263753fa3233d | p3@Gjc2 |
| 3.19e-26 | FFCP PHASE1:Mm9::chr11:32036107..32036145,-#_4036b79d54179c5f1512dc2f8f087a13 | p@chr11:32036107..32036145, - |
| 3.19e-26 | FFCP PHASE2:Mm9::chr11:32036107..32036145,-#_4036b79d54179c5f1512dc2f8f087a13 | p@chr11:32036107..32036145, - |
| 4.27e-26 | FFCP PHASE1:Mm9::chr17:35096058..35096095,-#_0eb917498fcf27dd7e14bf2f87f44e8c | p3@Hspa1b |
| 4.27e-26 | FFCP PHASE2:Mm9::chr2:85036854..85036865,-#_0eb917498fcf27dd7e14bf2f87f44e8c | p1@Lrrc55 |
| 4.27e-26 | FFCP PHASE2:Mm9::chr17:35096058..35096095,-#_0eb917498fcf27dd7e14bf2f87f44e8c | p3@Hspa1b |
| 4.27e-26 | FFCP PHASE1:Mm9::chr2:85036854..85036865,-#_0eb917498fcf27dd7e14bf2f87f44e8c | p1@Lrrc55 |
| 5.7e-26 | FFCP PHASE2:Mm9::chr11:96160098..96160112,+#_3908897af09700665ff8ffbc4136befc | p8@Hoxb6 |
| 5.7e-26 | FFCP PHASE1:Mm9::chr11:96160098..96160112,+#_3908897af09700665ff8ffbc4136befc | p8@Hoxb6 |
| 7.61e-26 | FFCP PHASE1:Mm9::chr2:74529917..74529926,+#_42c2ead4e6853e43da99138c0dc16701 | p5@Hoxd10 |
| 7.61e-26 | FFCP PHASE2:Mm9::chr2:74529917..74529926,+#_42c2ead4e6853e43da99138c0dc16701 | p5@Hoxd10 |
| 1.02e-25 | FFCP PHASE1:Mm9::chr2:74530108..74530131,+#_368137b13b5d4ca2af9524a5bbd62a04 | p@chr2:74530108..74530131, + |
| 1.02e-25 | FFCP PHASE2:Mm9::chr2:74530108..74530131,+#_368137b13b5d4ca2af9524a5bbd62a04 | p@chr2:74530108..74530131, + |
| 1.8e-25 | FFCP PHASE1:Mm9::chr11:102750776..102750792,-#_785d6b831c1de739f86a2f9182390378 | p@chr11:102750776..102750792, - |
| 1.8e-25 | FFCP PHASE2:Mm9::chr11:102750776..102750792,-#_785d6b831c1de739f86a2f9182390378 | p@chr11:102750776..102750792, - |
| 3.06e-23 | FFCP PHASE2:Mm9::chr12:86865781..86865791,+#_3e97071838aeeeb6420a6e73b526b2eb | p@chr12:86865781..86865791, + |
| 3.06e-23 | FFCP PHASE1:Mm9::chr1:173088898..173088910,+#_3e97071838aeeeb6420a6e73b526b2eb | p@chr1:173088898..173088910, + |
| 3.06e-23 | FFCP PHASE2:Mm9::chr1:173088898..173088910,+#_3e97071838aeeeb6420a6e73b526b2eb | p@chr1:173088898..173088910, + |
| 3.06e-23 | FFCP PHASE1:Mm9::chr12:86865781..86865791,+#_3e97071838aeeeb6420a6e73b526b2eb | p@chr12:86865781..86865791, + |
| 3.95e-23 | FFCP PHASE2:Mm9::chr4:124373153..124373164,+#_57bf103520b0c134a77e0d336bc0ef64 | p@chr4:124373153..124373164, + |
| 3.95e-23 | FFCP PHASE2:Mm9::chr19:46407266..46407281,-#_57bf103520b0c134a77e0d336bc0ef64 | p@chr19:46407266..46407281, - |
| 3.95e-23 | FFCP PHASE1:Mm9::chr19:46407266..46407281,-#_57bf103520b0c134a77e0d336bc0ef64 | p@chr19:46407266..46407281, - |
| 3.95e-23 | FFCP PHASE1:Mm9::chr4:124373153..124373164,+#_57bf103520b0c134a77e0d336bc0ef64 | p@chr4:124373153..124373164, + |
| 5.75e-23 | FFCP PHASE1:Mm9::chr1:173090487..173090490,+#_f0e74943b4265d226745aa5ac6d200ed | p@chr1:173090487..173090490, + |
| 5.75e-23 | FFCP PHASE2:Mm9::chr1:173090487..173090490,+#_f0e74943b4265d226745aa5ac6d200ed | p@chr1:173090487..173090490, + |
| 6.57e-23 | FFCP PHASE2:Mm9::chr19:46407404..46407418,-#_065adcc5d904e7a5325f1f142d6c0814 | p@chr19:46407404..46407418, - |
| 6.57e-23 | FFCP PHASE1:Mm9::chr19:46407404..46407418,-#_065adcc5d904e7a5325f1f142d6c0814 | p@chr19:46407404..46407418, - |
| 9.5e-23 | FFCP PHASE1:Mm9::chr5:115995281..115995324,+#_e83bebe6a08bcaa670b99ded09a78563 | p14@Pxn |
| 9.5e-23 | FFCP PHASE2:Mm9::chr7:57165440..57165441,+#_e83bebe6a08bcaa670b99ded09a78563 | p13@Slc6a5 |
| 9.5e-23 | FFCP PHASE1:Mm9::chr19:6498166..6498173,+#_e83bebe6a08bcaa670b99ded09a78563 | p18@Nrxn2 |
| 9.5e-23 | FFCP PHASE1:Mm9::chr11:44456648..44456656,+#_e83bebe6a08bcaa670b99ded09a78563 | p@chr11:44456648..44456656, + |
| 9.5e-23 | FFCP PHASE2:Mm9::chr5:115995281..115995324,+#_e83bebe6a08bcaa670b99ded09a78563 | p14@Pxn |
| 9.5e-23 | FFCP PHASE1:Mm9::chr7:57165440..57165441,+#_e83bebe6a08bcaa670b99ded09a78563 | p13@Slc6a5 |
| 9.5e-23 | FFCP PHASE2:Mm9::chr19:6498166..6498173,+#_e83bebe6a08bcaa670b99ded09a78563 | p18@Nrxn2 |
| 9.5e-23 | FFCP PHASE2:Mm9::chr11:44456648..44456656,+#_e83bebe6a08bcaa670b99ded09a78563 | p@chr11:44456648..44456656, + |
| 1.09e-22 | FFCP PHASE2:Mm9::chr11:96132456..96132467,+#_bc8f4e16ec993bded64004d03a78d238 | p4@Hoxb9 |
| 1.09e-22 | FFCP PHASE1:Mm9::chr11:96132456..96132467,+#_bc8f4e16ec993bded64004d03a78d238 | p4@Hoxb9 |
| 1.8e-22 | FFCP PHASE1:Mm9::chr13:33175964..33175973,+#_52c700012343b7ef987fd7610172e41d | p2@Serpinb1b |
| 1.8e-22 | FFCP PHASE2:Mm9::chr13:33175964..33175973,+#_52c700012343b7ef987fd7610172e41d | p2@Serpinb1b |
| 2.32e-22 | FFCP PHASE1:Mm9::chr7:57165602..57165612,+#_208fad75056f6def869a51a1ec7c6a2c | p6@Slc6a5 |
| 2.32e-22 | FFCP PHASE2:Mm9::chr7:57165602..57165612,+#_208fad75056f6def869a51a1ec7c6a2c | p6@Slc6a5 |
| 2.97e-22 | FFCP PHASE1:Mm9::chr11:105898171..105898180,+#_65cc946eb49ffea830c0a29b79ac8801 | p4@Dcaf7 |
| 2.97e-22 | FFCP PHASE2:Mm9::chr11:105898171..105898180,+#_65cc946eb49ffea830c0a29b79ac8801 | p4@Dcaf7 |
| 5.12e-21 | FFCP PHASE1:Mm9::chr4:150371190..150371197,+#_72231d2a86b4e43cdec502ade8adbcb4 | p1@Uts2 |
| 5.12e-21 | FFCP PHASE2:Mm9::chr4:150371190..150371197,+#_72231d2a86b4e43cdec502ade8adbcb4 | p1@Uts2 |
| 6.43e-21 | FFCP PHASE1:Mm9::chr19:46407289..46407300,-#_f8167630e5828d39966eaceb1580e11c | p@chr19:46407289..46407300, - |
| 6.43e-21 | FFCP PHASE2:Mm9::chr19:46407289..46407300,-#_f8167630e5828d39966eaceb1580e11c | p@chr19:46407289..46407300, - |
| 1.27e-20 | FFCP PHASE1:Mm9::chr11:96146541..96146544,+#_df8714371e1d6be0ece22020c6c4d2d2 | p@chr11:96146541..96146544, + |
| 1.27e-20 | FFCP PHASE2:Mm9::chr11:96146541..96146544,+#_df8714371e1d6be0ece22020c6c4d2d2 | p@chr11:96146541..96146544, + |
| 1.59e-20 | FFCP PHASE1:Mm9::chr11:33103589..33103599,-#_85bf2521abca128ffdaba636007a39cf | p3@Tlx3 |
| 1.59e-20 | FFCP PHASE2:Mm9::chr11:33103589..33103599,-#_85bf2521abca128ffdaba636007a39cf | p3@Tlx3 |
| 2.0e-20 | FFCP PHASE1:Mm9::chr7:31700035..31700068,-#_6a197d821ba16d326bd72537188930ea | p2@Mag |
| 2.0e-20 | FFCP PHASE2:Mm9::chr7:31700035..31700068,-#_6a197d821ba16d326bd72537188930ea | p2@Mag |
| 6.1e-20 | FFCP PHASE2:Mm9::chr11:102749020..102749031,-#_aed8ace6c3de7c6fd34012dd70763ee2 | p@chr11:102749020..102749031, - |
| 6.1e-20 | FFCP PHASE1:Mm9::chr1:187242150..187242173,+#_aed8ace6c3de7c6fd34012dd70763ee2 | p@chr1:187242150..187242173, + |
| 6.1e-20 | FFCP PHASE2:Mm9::chr1:187242150..187242173,+#_aed8ace6c3de7c6fd34012dd70763ee2 | p@chr1:187242150..187242173, + |
| 6.1e-20 | FFCP PHASE1:Mm9::chr11:102749020..102749031,-#_aed8ace6c3de7c6fd34012dd70763ee2 | p@chr11:102749020..102749031, - |
| 7.62e-20 | FFCP PHASE1:Mm9::chr11:102758074..102758083,+#_820b054fed7c026df99500511caa3d6a | p@chr11:102758074..102758083, + |
| 7.62e-20 | FFCP PHASE2:Mm9::chr11:102758074..102758083,+#_820b054fed7c026df99500511caa3d6a | p@chr11:102758074..102758083, + |
| 3.08e-19 | FFCP PHASE1:Mm9::chr1:173089678..173089690,+#_5acf73e411c92b1b4ea0755a8169485d | p3@Mpz |
| 3.08e-19 | FFCP PHASE2:Mm9::chr1:173089678..173089690,+#_5acf73e411c92b1b4ea0755a8169485d | p3@Mpz |
| 3.79e-19 | FFCP PHASE2:Mm9::chr14:68704745..68704754,+#_7de6bafec666e42142b7846d4265db3d | p@chr14:68704745..68704754, + |
| 3.79e-19 | FFCP PHASE2:Mm9::chrX:61750178..61750185,+#_7de6bafec666e42142b7846d4265db3d | p@chrX:61750178..61750185, + |
| 3.79e-19 | FFCP PHASE1:Mm9::chrX:61750178..61750185,+#_7de6bafec666e42142b7846d4265db3d | p@chrX:61750178..61750185, + |
| 3.79e-19 | FFCP PHASE1:Mm9::chr14:68704745..68704754,+#_7de6bafec666e42142b7846d4265db3d | p@chr14:68704745..68704754, + |
| 5.72e-19 | FFCP PHASE2:Mm9::chr18:82753999..82754008,+#_f3fe9cef5b147e34da294b4a06fea5e4 | p@chr18:82753999..82754008, + |
| 5.72e-19 | FFCP PHASE1:Mm9::chr18:82753999..82754008,+#_f3fe9cef5b147e34da294b4a06fea5e4 | p@chr18:82753999..82754008, + |
| 7.02e-19 | FFCP PHASE2:Mm9::chr10:80488930..80488949,-#_d47cf58564b28fb4a661b79f433118a7 | p@chr10:80488930..80488949, - |
| 7.02e-19 | FFCP PHASE2:Mm9::chr2:70399563..70399583,+#_d47cf58564b28fb4a661b79f433118a7 | p@chr2:70399563..70399583, + |
| 7.02e-19 | FFCP PHASE2:Mm9::chr5:24032551..24032557,-#_d47cf58564b28fb4a661b79f433118a7 | p1@Gbx1 |
| 7.02e-19 | FFCP PHASE1:Mm9::chr2:70399563..70399583,+#_d47cf58564b28fb4a661b79f433118a7 | p@chr2:70399563..70399583, + |
| 7.02e-19 | FFCP PHASE1:Mm9::chr5:24032551..24032557,-#_d47cf58564b28fb4a661b79f433118a7 | p1@Gbx1 |
| 7.02e-19 | FFCP PHASE1:Mm9::chr10:80488930..80488949,-#_d47cf58564b28fb4a661b79f433118a7 | p@chr10:80488930..80488949, - |
| 1.06e-18 | FFCP PHASE2:Mm9::chr11:5050065..5050097,-#_c89457d9a52e42b68e01dc1accbc23cb | p4@Emid1 |
| 1.06e-18 | FFCP PHASE1:Mm9::chr11:5050065..5050097,-#_c89457d9a52e42b68e01dc1accbc23cb | p4@Emid1 |
| 1.3e-18 | FFCP PHASE2:Mm9::chr15:72378067..72378074,-#_6728df33bee9282290b4a3252ff37448 | p@chr15:72378067..72378074, - |
| 1.3e-18 | FFCP PHASE1:Mm9::chr15:72378067..72378074,-#_6728df33bee9282290b4a3252ff37448 | p@chr15:72378067..72378074, - |
| 1.59e-18 | FFCP PHASE2:Mm9::chr12:47821823..47821831,-#_19254f1b0bab2e1d6ca60a62f8cc08da | p@chr12:47821823..47821831, - |
| 1.59e-18 | FFCP PHASE1:Mm9::chr12:47821823..47821831,-#_19254f1b0bab2e1d6ca60a62f8cc08da | p@chr12:47821823..47821831, - |
