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{{UBERON
{{UBERON
|id=UBERON:0002376
|alt_id=UBERON:FMA_9616-MA_0000578-ZFA_0000328
|name=muscle of head
|anatomical_img_id=FMA:9616
|namespace=
|def="Muscle organ which is a part of the head. Examples: masseter, orbicularis oculi.[FMA]" [FMA:9616]
|xref=AAO:0000107;;BTO:0000021;;EFO:0003524;;EHDAA2:0000322;;EMAPA:18171;;FMA:9616;;MA:0000578;;TAO:0000328;;ZFA:0000328;;ZFA:0001652
|is_a=UBERON:0004120;;UBERON:0010314;;UBERON:0010959
|synonym="adult head muscle organ" EXACT [OBOL:automatic];;"cephalic muscle" EXACT [ZFA:0001652];;"cephalic musculature" EXACT [];;"cranial muscle " RELATED [ZFA:0001652];;"head muscle" EXACT [];;"head muscle organ" EXACT [OBOL:automatic];;"head muscles" RELATED [];;"muscle organ of adult head" EXACT [OBOL:automatic];;"muscle organ of head" EXACT [OBOL:automatic];;"musculus caput" EXACT []
|comment=TODO - check ZFA
|comment=TODO - check ZFA
|alt_id=UBERON:FMA_9616-MA_0000578-ZFA_0000328
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Muscle organ which is a part of the head. Examples: masseter, orbicularis oculi.[FMA]" [FMA:9616]
|subset=uberon_slim;;vertebrate_core
|derives_from=
|derives_from=
|develops_from=UBERON:0006904
|develops_from=UBERON:0006904
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0002376
|is_a=UBERON:0004120;;UBERON:0010314;;UBERON:0010959
|is_obsolete=
|located_in=
|located_in=
|name=muscle of head
|namespace=
|obo_creation_date=
|part_of=UBERON:0000033;;UBERON:0004461
|part_of=UBERON:0000033;;UBERON:0004461
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=uberon_slim;;vertebrate_core
|preceded_by=
|synonym="adult head muscle organ" EXACT [OBOL:automatic];;"cephalic muscle" EXACT [ZFA:0001652];;"cephalic musculature" EXACT [];;"cranial muscle " RELATED [ZFA:0001652];;"head muscle" EXACT [];;"head muscle organ" EXACT [OBOL:automatic];;"head muscles" RELATED [];;"muscle organ of adult head" EXACT [OBOL:automatic];;"muscle organ of head" EXACT [OBOL:automatic];;"musculus caput" EXACT []
|union_of=
|xref=AAO:0000107;;BTO:0000021;;EFO:0003524;;EHDAA2:0000322;;EMAPA:18171;;FMA:9616;;MA:0000578;;TAO:0000328;;ZFA:0000328;;ZFA:0001652
}}
}}

Revision as of 18:42, 29 November 2012

Name:muscle of head
Definition:"Muscle organ which is a part of the head. Examples: masseter, orbicularis oculi.[FMA]" [FMA:9616]
Xrefs:
links:

AAO:0000107
BTO:0000021
EFO:0003524
EHDAA2:0000322
EMAPA:18171
FMA:9616
MA:0000578
TAO:0000328
ZFA:0000328

ZFA:0001652
Synonyms: "adult head muscle organ" EXACT [OBOL:automatic]
"cephalic muscle" EXACT [ZFA:0001652]
"cephalic musculature" EXACT []
"cranial muscle " RELATED [ZFA:0001652]
"head muscle" EXACT []
"head muscle organ" EXACT [OBOL:automatic]
"head muscles" RELATED []
"muscle organ of adult head" EXACT [OBOL:automatic]
"muscle organ of head" EXACT [OBOL:automatic]
"musculus caput" EXACT []
Comments:TODO - check ZFA
Alt_id: UBERON:FMA_9616-MA_0000578-ZFA_0000328
Subset: uberon_slim
vertebrate_core

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0004120(mesoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest),UBERON:0010959(craniocervical muscle)
develops_from:UBERON:0006904(head mesenchyme from mesoderm)
part_of:UBERON:0000033(head),UBERON:0004461(musculature of head)



Children

is a:UBERON:0001577 (muscle of face)
part of:UBERON:0001602 (medial rectus extraocular muscle)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

... further results


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0002376 (muscle of head), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results