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{{UBERON
{{UBERON
|id=UBERON:0003067
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|name=dorsolateral placode
|namespace=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
|is_a=UBERON:0009955
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|comment=
|comment=
|alt_id=UBERON:XAO_0000187-ZFA_0001310
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
|subset=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0003067
|is_a=UBERON:0009955
|is_obsolete=
|located_in=
|located_in=
|name=dorsolateral placode
|namespace=FANTOM
|obo_creation_date=
|part_of=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|subset=
|preceded_by=
|synonym="dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
|union_of=
|xref=TAO:0001310;;VHOG:0000103;;XAO:0000187;;ZFA:0001310
}}
}}

Latest revision as of 17:36, 12 September 2014

Name:dorsolateral placode
Namespace:FANTOM
Definition:"Lateral neurogenic placodes positioned dorsal of the epibranchial placodes." [ZFIN:curator]
Xrefs:
links:

TAO:0001310
VHOG:0000103
XAO:0000187

ZFA:0001310
Synonyms: "dorsolateral placodes" EXACT PLURAL [ZFA:0001310]
Alt_id: UBERON:XAO_0000187-ZFA_0001310

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0009955(neurogenic placode)



Children

is a:UBERON:0003069 (otic placode)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0003067 (dorsolateral placode), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_6f69956b8073250c371333dfea6820cep@chr18:38104702..38104718, -
1.87e-86FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_6f69956b8073250c371333dfea6820cep1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr13:58283583..58283607,-#_6f69956b8073250c371333dfea6820cep@chr13:58283583..58283607, -
1.87e-86FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_6f69956b8073250c371333dfea6820cep@chr3:154459246..154459253, +
1.87e-86FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_6f69956b8073250c371333dfea6820cep4@Tecta
1.87e-86FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_6f69956b8073250c371333dfea6820cep@chr6:86746562..86746579, -
1.87e-86FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_6f69956b8073250c371333dfea6820cep1@Dytn
1.87e-86FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_6f69956b8073250c371333dfea6820cep@chrX:154140781..154140788, +
1.87e-86FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_6f69956b8073250c371333dfea6820cep2@Otol1
1.87e-86FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_6f69956b8073250c371333dfea6820cep7@Pkn3
1.87e-86FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_6f69956b8073250c371333dfea6820cep1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_6f69956b8073250c371333dfea6820cep@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_6f69956b8073250c371333dfea6820cep4@Tecta
1.87e-86FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_6f69956b8073250c371333dfea6820cep@chr6:86745686..86745727, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_6f69956b8073250c371333dfea6820cep@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_6f69956b8073250c371333dfea6820cep1@Strc
1.87e-86FFCP PHASE1:Mm9::chr11:120222470..120222516,+#_6f69956b8073250c371333dfea6820cep2@Fscn2
1.87e-86FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_6f69956b8073250c371333dfea6820cep@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_6f69956b8073250c371333dfea6820cep@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr12:13508015..13508019,+#_6f69956b8073250c371333dfea6820cep@chr12:13508015..13508019, +
1.87e-86FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_6f69956b8073250c371333dfea6820cep7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_6f69956b8073250c371333dfea6820cep@chr1:43454162..43454170, -
1.87e-86FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_6f69956b8073250c371333dfea6820cep5@Otogl
1.87e-86FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_6f69956b8073250c371333dfea6820cep@chr9:42207697..42207705, -
1.87e-86FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_6f69956b8073250c371333dfea6820cep@chr7:27964761..27964768, +
1.87e-86FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_6f69956b8073250c371333dfea6820cep@chr9:50968647..50968668, -
1.87e-86FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_6f69956b8073250c371333dfea6820cep@chr3:154693281..154693317, -
1.87e-86FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_6f69956b8073250c371333dfea6820cep4@Chrna10
1.87e-86FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_6f69956b8073250c371333dfea6820cep10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_6f69956b8073250c371333dfea6820cep@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_6f69956b8073250c371333dfea6820cep4@Kncn
1.87e-86FFCP PHASE1:Mm9::chr10:67371994..67372010,+#_6f69956b8073250c371333dfea6820cep@chr10:67371994..67372010, +
1.87e-86FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_6f69956b8073250c371333dfea6820cep@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_6f69956b8073250c371333dfea6820cep1@Grxcr1
1.87e-86FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_6f69956b8073250c371333dfea6820cep4@Gipc3
1.87e-86FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_6f69956b8073250c371333dfea6820cep21@Espn
1.87e-86FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_6f69956b8073250c371333dfea6820cep2@Plscr5
1.87e-86FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_6f69956b8073250c371333dfea6820cep@chr3:58626291..58626298, -
1.87e-86FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_6f69956b8073250c371333dfea6820cep@chr9:56208792..56208814, -
1.87e-86FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_6f69956b8073250c371333dfea6820cep5@Fer1l6
1.87e-86FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_6f69956b8073250c371333dfea6820cep@chr5:3909290..3909299, +
1.87e-86FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_6f69956b8073250c371333dfea6820cep@chr5:150945209..150945220, +
1.87e-86FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_6f69956b8073250c371333dfea6820cep@chr9:41495920..41495928, -
1.87e-86FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_6f69956b8073250c371333dfea6820cep@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_6f69956b8073250c371333dfea6820cep@chr19:10536767..10536777, -
1.87e-86FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_6f69956b8073250c371333dfea6820cep@chr17:13983102..13983126, +
1.87e-86FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_6f69956b8073250c371333dfea6820cep@chr3:100724698..100724706, +
1.87e-86FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_6f69956b8073250c371333dfea6820cep11@Tsga14
1.87e-86FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_6f69956b8073250c371333dfea6820cep@chr15:103146966..103146971, -
1.87e-86FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_6f69956b8073250c371333dfea6820cep@chr19:10536797..10536802, -
1.87e-86FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_6f69956b8073250c371333dfea6820cep@chr9:56208792..56208814, -
1.87e-86FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_6f69956b8073250c371333dfea6820cep1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_6f69956b8073250c371333dfea6820cep@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_6f69956b8073250c371333dfea6820cep4@uc007rhb.1
1.87e-86FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_6f69956b8073250c371333dfea6820cep@chr1:172843813..172843834, -
1.87e-86FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_6f69956b8073250c371333dfea6820cep@chr1:182528371..182528385, +
1.87e-86FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_6f69956b8073250c371333dfea6820cep@chr14:31283085..31283097, -
1.87e-86FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_6f69956b8073250c371333dfea6820cep@chr4:130461150..130461185, +
1.87e-86FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_6f69956b8073250c371333dfea6820cep@chr6:113251614..113251623, +
1.87e-86FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_6f69956b8073250c371333dfea6820cep@chr3:35012425..35012439, +
1.87e-86FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_6f69956b8073250c371333dfea6820cep1@Kncn
1.87e-86FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_6f69956b8073250c371333dfea6820cep@chr17:13983160..13983167, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_6f69956b8073250c371333dfea6820cep1@Tecta
1.87e-86FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_6f69956b8073250c371333dfea6820cep@chr1:93235253..93235264, +
1.87e-86FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_6f69956b8073250c371333dfea6820cep@chr9:42206745..42206774, -
1.87e-86FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_6f69956b8073250c371333dfea6820cep1@Tectb
1.87e-86FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_6f69956b8073250c371333dfea6820cep1@Kcna10
1.87e-86FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_6f69956b8073250c371333dfea6820cep@chr3:35012397..35012405, +
1.87e-86FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_6f69956b8073250c371333dfea6820cep@chr15:89215306..89215315, +
1.87e-86FFCP PHASE1:Mm9::chr10:107349430..107349440,-#_6f69956b8073250c371333dfea6820cep3@Otogl
1.87e-86FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_6f69956b8073250c371333dfea6820cep5@BC030867
1.87e-86FFCP PHASE1:Mm9::chr12:109905468..109905474,+#_6f69956b8073250c371333dfea6820cep@chr12:109905468..109905474, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_6f69956b8073250c371333dfea6820cep@chr16:93971325..93971337, -
1.87e-86FFCP PHASE1:Mm9::chr14:63099970..63099980,-#_6f69956b8073250c371333dfea6820cep@chr14:63099970..63099980, -
1.87e-86FFCP PHASE2:Mm9::chr1:93218694..93218705,+#_6f69956b8073250c371333dfea6820cep1@Espnl
1.87e-86FFCP PHASE1:Mm9::chr17:31335869..31335899,-#_6f69956b8073250c371333dfea6820cep1@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr18:42158627..42158630,-#_6f69956b8073250c371333dfea6820cep@chr18:42158627..42158630, -
1.87e-86FFCP PHASE1:Mm9::chr9:66860888..66860899,+#_6f69956b8073250c371333dfea6820cep@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr13:78257491..78257498,+#_6f69956b8073250c371333dfea6820cep@chr13:78257491..78257498, +
1.87e-86FFCP PHASE1:Mm9::chr7:109052297..109052300,-#_6f69956b8073250c371333dfea6820cep2@Tomt
1.87e-86FFCP PHASE1:Mm9::chr11:8405038..8405048,-#_6f69956b8073250c371333dfea6820cep@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_6f69956b8073250c371333dfea6820cep@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chr5:30710403..30710406,-#_6f69956b8073250c371333dfea6820cep10@Otof
1.87e-86FFCP PHASE2:Mm9::chr4:151505798..151505818,-#_6f69956b8073250c371333dfea6820cep21@Espn
1.87e-86FFCP PHASE1:Mm9::chr9:42206745..42206774,-#_6f69956b8073250c371333dfea6820cep@chr9:42206745..42206774, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011921..67011934,+#_6f69956b8073250c371333dfea6820cep2@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr12:13508046..13508055,+#_6f69956b8073250c371333dfea6820cep@chr12:13508046..13508055, +
1.87e-86FFCP PHASE2:Mm9::chr5:150945209..150945220,+#_6f69956b8073250c371333dfea6820cep@chr5:150945209..150945220, +
1.87e-86FFCP PHASE2:Mm9::chr3:154693281..154693317,-#_6f69956b8073250c371333dfea6820cep@chr3:154693281..154693317, -
1.87e-86FFCP PHASE2:Mm9::chr9:42208142..42208157,-#_6f69956b8073250c371333dfea6820cep10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:128881546..128881553,-#_6f69956b8073250c371333dfea6820cep@chr2:128881546..128881553, -
1.87e-86FFCP PHASE1:Mm9::chrX:154140800..154140810,+#_6f69956b8073250c371333dfea6820cep@chrX:154140800..154140810, +
1.87e-86FFCP PHASE1:Mm9::chr3:81012915..81012923,+#_6f69956b8073250c371333dfea6820cep@chr3:81012915..81012923, +
1.87e-86FFCP PHASE2:Mm9::chr2:152453066..152453075,-#_6f69956b8073250c371333dfea6820cep@chr2:152453066..152453075, -
1.87e-86FFCP PHASE1:Mm9::chr14:47293487..47293493,-#_6f69956b8073250c371333dfea6820cep@chr14:47293487..47293493, -
1.87e-86FFCP PHASE1:Mm9::chr12:77084875..77084885,+#_6f69956b8073250c371333dfea6820cep@chr12:77084875..77084885, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335903..31335921,-#_6f69956b8073250c371333dfea6820cep2@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr14:47293496..47293510,-#_6f69956b8073250c371333dfea6820cep@chr14:47293496..47293510, -
1.87e-86FFCP PHASE1:Mm9::chr9:42208142..42208157,-#_6f69956b8073250c371333dfea6820cep10@Tecta
1.87e-86FFCP PHASE1:Mm9::chr13:37195838..37195870,-#_6f69956b8073250c371333dfea6820cep@chr13:37195838..37195870, -

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