Personal tools

UBERON:0005056

From FANTOM5_SSTAR

Jump to: navigation, search

Name:external female genitalia
Namespace:FANTOM
Definition:"An external reproductive organ that is part of a female reproductive system [Obol]." [OBOL:automatic]
Xrefs:
links:

BTO:0003100
EMAPA:30984
FMA:45649
galen:FemaleExternalGenitalia

SCTID:362234008
Synonyms: "external female genital organ" EXACT [BTO:0003100]
"external genitalia of female reproductive system" EXACT [OBOL:automatic]
"female external genitalia" EXACT [FMA:45649]
"organa genitalia feminina externa" RELATED [BTO:0003100]
Subset: organ_slim

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003134(female reproductive organ),UBERON:0004176(external genitalia)
disjoint_from:UBERON:0009196(indifferent external genitalia)
part_of:UBERON:0000474(female reproductive system)



Children

part of:UBERON:0000997 (mammalian vulva)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005056 (external female genitalia), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr6:43706592..43706595,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr6:43706592..43706595, -
5.42e-195FFCP PHASE2:Hg19::chr17:39678082..39678085,-#_f81e6cbe66be9e8915ceef504ea464e0p15@KRT15
5.42e-195FFCP PHASE1:Hg19::chr6:43706592..43706595,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr6:43706592..43706595, -
5.42e-195FFCP PHASE1:Hg19::chr5:84943573..84943591,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr5:84943573..84943591, -
5.42e-195FFCP PHASE1:Hg19::chr9:135687993..135687996,+#_f81e6cbe66be9e8915ceef504ea464e0+, p@chr9:135687993..135687996
5.42e-195FFCP PHASE2:Hg19::chr9:135687993..135687996,+#_f81e6cbe66be9e8915ceef504ea464e0p@chr9:135687993..135687996, +
5.42e-195FFCP PHASE2:Hg19::chr5:84943573..84943591,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr5:84943573..84943591, -
5.42e-195FFCP PHASE2:Hg19::chr19:51512580..51512608,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr19:51512580..51512608, -
5.42e-195FFCP PHASE2:Hg19::chr2:72258505..72258535,+#_f81e6cbe66be9e8915ceef504ea464e0p@chr2:72258505..72258535, +
5.42e-195FFCP PHASE1:Hg19::chr19:51512580..51512608,-#_f81e6cbe66be9e8915ceef504ea464e0-, p@chr19:51512580..51512608
5.42e-195FFCP PHASE1:Hg19::chr11:69988499..69988503,-#_f81e6cbe66be9e8915ceef504ea464e0-, p@chr11:69988499..69988503
5.42e-195FFCP PHASE2:Hg19::chr4:23975557..23975561,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr4:23975557..23975561, -
5.42e-195FFCP PHASE1:Hg19::chr4:23975557..23975561,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr4:23975557..23975561, -
5.42e-195FFCP PHASE1:Hg19::chr17:39678082..39678085,-#_f81e6cbe66be9e8915ceef504ea464e0p15@KRT15
5.42e-195FFCP PHASE1:Hg19::chr2:72258505..72258535,+#_f81e6cbe66be9e8915ceef504ea464e0p@chr2:72258505..72258535, +
5.42e-195FFCP PHASE2:Hg19::chr7:55088621..55088630,+#_f81e6cbe66be9e8915ceef504ea464e0p@chr7:55088621..55088630, +
5.42e-195FFCP PHASE2:Hg19::chr11:69988499..69988503,-#_f81e6cbe66be9e8915ceef504ea464e0p@chr11:69988499..69988503, -
5.42e-195FFCP PHASE1:Hg19::chr7:55088621..55088630,+#_f81e6cbe66be9e8915ceef504ea464e0p@chr7:55088621..55088630, +
9.37e-99FFCP PHASE2:Hg19::chr1:222131869..222131874,+#_d51b1e7f3653db10439a09820b2c5487p@chr1:222131869..222131874, +
9.37e-99FFCP PHASE2:Hg19::chr4:24105215..24105219,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24105215..24105219, -
9.37e-99FFCP PHASE1:Hg19::chr4:24105215..24105219,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24105215..24105219, -
9.37e-99FFCP PHASE1:Hg19::chr1:222131869..222131874,+#_d51b1e7f3653db10439a09820b2c5487p@chr1:222131869..222131874, +
9.37e-99FFCP PHASE2:Hg19::chr4:24125531..24125534,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24125531..24125534, -
9.37e-99FFCP PHASE1:Hg19::chr4:24125531..24125534,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24125531..24125534, -
9.37e-99FFCP PHASE2:Hg19::chr4:24133915..24133919,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24133915..24133919, -
9.37e-99FFCP PHASE1:Hg19::chr4:24133915..24133919,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24133915..24133919, -
9.37e-99FFCP PHASE2:Hg19::chr4:24233822..24233825,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24233822..24233825, -
9.37e-99FFCP PHASE1:Hg19::chr4:24233822..24233825,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24233822..24233825, -
9.37e-99FFCP PHASE1:Hg19::chr1:209980124..209980125,+#_d51b1e7f3653db10439a09820b2c5487p@chr1:209980124..209980125, +
9.37e-99FFCP PHASE2:Hg19::chr1:209980124..209980125,+#_d51b1e7f3653db10439a09820b2c5487p@chr1:209980124..209980125, +
9.37e-99FFCP PHASE2:Hg19::chr4:24188430..24188435,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24188430..24188435, -
9.37e-99FFCP PHASE1:Hg19::chr4:24188430..24188435,-#_d51b1e7f3653db10439a09820b2c5487p@chr4:24188430..24188435, -
2.55e-98FFCP PHASE2:Hg19::chr7:55141834..55141838,-#_a732ba243517803d413724a7bde13490p@chr7:55141834..55141838, -
2.55e-98FFCP PHASE1:Hg19::chr7:55141834..55141838,-#_a732ba243517803d413724a7bde13490p@chr7:55141834..55141838, -
1.23e-66FFCP PHASE2:Hg19::chr4:24100907..24100911,-#_39480de0eb189fd01f108e6ff808bdb8-, p@chr4:24100907..24100911
1.23e-66FFCP PHASE1:Hg19::chr4:24100907..24100911,-#_39480de0eb189fd01f108e6ff808bdb8p@chr4:24100907..24100911, -
1.23e-66FFCP PHASE1:Hg19::chr3:193809263..193809278,+#_39480de0eb189fd01f108e6ff808bdb8p1@ENST00000457815
1.23e-66FFCP PHASE2:Hg19::chr3:193809263..193809278,+#_39480de0eb189fd01f108e6ff808bdb8p1@ENST00000457815
1.23e-66FFCP PHASE2:Hg19::chr4:23981805..23981809,-#_39480de0eb189fd01f108e6ff808bdb8p@chr4:23981805..23981809, -
1.23e-66FFCP PHASE1:Hg19::chr4:23981805..23981809,-#_39480de0eb189fd01f108e6ff808bdb8-, p@chr4:23981805..23981809
2.39e-66FFCP PHASE1:Hg19::chr6:159149368..159149371,-#_daeec47c689a1bb4e1205e674ca28f79p@chr6:159149368..159149371, -
2.39e-66FFCP PHASE1:Hg19::chr17:39675882..39675894,-#_daeec47c689a1bb4e1205e674ca28f79p@chr17:39675882..39675894, -
2.39e-66FFCP PHASE2:Hg19::chr17:39675882..39675894,-#_daeec47c689a1bb4e1205e674ca28f79p@chr17:39675882..39675894, -
2.39e-66FFCP PHASE2:Hg19::chr1:23330592..23330593,-#_daeec47c689a1bb4e1205e674ca28f79p@chr1:23330592..23330593, -
2.39e-66FFCP PHASE1:Hg19::chr1:23330592..23330593,-#_daeec47c689a1bb4e1205e674ca28f79p@chr1:23330592..23330593, -
2.39e-66FFCP PHASE2:Hg19::chr6:159149368..159149371,-#_daeec47c689a1bb4e1205e674ca28f79p@chr6:159149368..159149371, -
4.66e-66FFCP PHASE2:Hg19::chr18:61254400..61254410,+#_93e5f0171d9757f0998ad52545161a3cp8@SERPINB13
4.66e-66FFCP PHASE1:Hg19::chr18:61254400..61254410,+#_93e5f0171d9757f0998ad52545161a3cp8@SERPINB13
6.58e-50FFCP PHASE2:Hg19::chr7:98870934..98870947,+#_df8a06613f21273f3e246c2fd7f39d6ep4@MYH16
6.58e-50FFCP PHASE2:Hg19::chr16:3041330..3041336,+#_df8a06613f21273f3e246c2fd7f39d6ep@chr16:3041330..3041336, +
6.58e-50FFCP PHASE1:Hg19::chr7:98870934..98870947,+#_df8a06613f21273f3e246c2fd7f39d6ep4@MYH16
6.58e-50FFCP PHASE2:Hg19::chr7:98870948..98870967,+#_df8a06613f21273f3e246c2fd7f39d6ep3@MYH16
6.58e-50FFCP PHASE1:Hg19::chr7:98870948..98870967,+#_df8a06613f21273f3e246c2fd7f39d6ep3@MYH16
6.58e-50FFCP PHASE1:Hg19::chr1:209945709..209945715,-#_df8a06613f21273f3e246c2fd7f39d6e-, p@chr1:209945709..209945715
6.58e-50FFCP PHASE2:Hg19::chr1:209945709..209945715,-#_df8a06613f21273f3e246c2fd7f39d6e-, p@chr1:209945709..209945715
6.58e-50FFCP PHASE2:Hg19::chr20:46473115..46473124,-#_df8a06613f21273f3e246c2fd7f39d6ep@chr20:46473115..46473124, -
6.58e-50FFCP PHASE1:Hg19::chr7:154497207..154497243,-#_df8a06613f21273f3e246c2fd7f39d6ep@chr7:154497207..154497243, -
6.58e-50FFCP PHASE1:Hg19::chr1:27192983..27192986,+#_df8a06613f21273f3e246c2fd7f39d6ep@chr1:27192983..27192986, +
6.58e-50FFCP PHASE1:Hg19::chr16:3041330..3041336,+#_df8a06613f21273f3e246c2fd7f39d6ep@chr16:3041330..3041336, +
6.58e-50FFCP PHASE1:Hg19::chr20:46473115..46473124,-#_df8a06613f21273f3e246c2fd7f39d6ep@chr20:46473115..46473124, -
6.58e-50FFCP PHASE2:Hg19::chr7:154497207..154497243,-#_df8a06613f21273f3e246c2fd7f39d6ep@chr7:154497207..154497243, -
6.58e-50FFCP PHASE2:Hg19::chr1:27192983..27192986,+#_df8a06613f21273f3e246c2fd7f39d6ep@chr1:27192983..27192986, +
6.62e-41FFCP PHASE2:Hg19::chr6:47009992..47009993,-#_2b872c57f81ef31833c07a32482ee80ep4@GPR110
6.62e-41FFCP PHASE2:Hg19::chr15:92484587..92484596,+#_2b872c57f81ef31833c07a32482ee80ep14@SLCO3A1
6.62e-41FFCP PHASE1:Hg19::chr15:92484587..92484596,+#_2b872c57f81ef31833c07a32482ee80ep14@SLCO3A1
6.62e-41FFCP PHASE1:Hg19::chr18:61586483..61586487,+#_2b872c57f81ef31833c07a32482ee80ep@chr18:61586483..61586487, +
6.62e-41FFCP PHASE1:Hg19::chr6:47009992..47009993,-#_2b872c57f81ef31833c07a32482ee80ep4@GPR110
6.62e-41FFCP PHASE2:Hg19::chr18:61586483..61586487,+#_2b872c57f81ef31833c07a32482ee80ep@chr18:61586483..61586487, +
9.91e-41FFCP PHASE2:Hg19::chr7:55270422..55270434,+#_3d031bcef78a552a4c60387f67825b0cp@chr7:55270422..55270434, +
9.91e-41FFCP PHASE1:Hg19::chr7:55270422..55270434,+#_3d031bcef78a552a4c60387f67825b0cp@chr7:55270422..55270434, +
9.91e-41FFCP PHASE2:Hg19::chr7:55149426..55149432,+#_3d031bcef78a552a4c60387f67825b0cp@chr7:55149426..55149432, +
9.91e-41FFCP PHASE1:Hg19::chr7:55149426..55149432,+#_3d031bcef78a552a4c60387f67825b0cp@chr7:55149426..55149432, +
1.48e-40FFCP PHASE1:Hg19::chr17:39675950..39675974,-#_e373c24553d28f90d39f715a3ff321f1p@chr17:39675950..39675974, -
1.48e-40FFCP PHASE1:Hg19::chr7:4722965..4723005,-#_e373c24553d28f90d39f715a3ff321f1p@chr7:4722965..4723005, -
1.48e-40FFCP PHASE1:Hg19::chr8:143866652..143866665,-#_e373c24553d28f90d39f715a3ff321f1p@chr8:143866652..143866665, -
1.48e-40FFCP PHASE2:Hg19::chr7:4722965..4723005,-#_e373c24553d28f90d39f715a3ff321f1p@chr7:4722965..4723005, -
1.48e-40FFCP PHASE2:Hg19::chr17:39675950..39675974,-#_e373c24553d28f90d39f715a3ff321f1p@chr17:39675950..39675974, -
1.48e-40FFCP PHASE2:Hg19::chr8:143866652..143866665,-#_e373c24553d28f90d39f715a3ff321f1p@chr8:143866652..143866665, -
2.21e-40FFCP PHASE2:Hg19::chr15:101417937..101417955,+#_d05b88860c737c0e27b7a165c30fd276p8@ALDH1A3
2.21e-40FFCP PHASE1:Hg19::chr3:50308296..50308307,+#_d05b88860c737c0e27b7a165c30fd276p9@SEMA3B
2.21e-40FFCP PHASE1:Hg19::chr15:101417937..101417955,+#_d05b88860c737c0e27b7a165c30fd276p8@ALDH1A3
2.21e-40FFCP PHASE2:Hg19::chr3:50308296..50308307,+#_d05b88860c737c0e27b7a165c30fd276p9@SEMA3B
3.3e-40FFCP PHASE2:Hg19::chr17:2264983..2264992,+#_8796adab76a856c4b9ea97436a13c5efp@chr17:2264983..2264992, +
3.3e-40FFCP PHASE1:Hg19::chr2:165650899..165650926,-#_8796adab76a856c4b9ea97436a13c5efp@chr2:165650899..165650926, -
3.3e-40FFCP PHASE2:Hg19::chr2:165650899..165650926,-#_8796adab76a856c4b9ea97436a13c5efp@chr2:165650899..165650926, -
3.3e-40FFCP PHASE1:Hg19::chr17:2264983..2264992,+#_8796adab76a856c4b9ea97436a13c5efp@chr17:2264983..2264992, +
1.84e-34FFCP PHASE1:Hg19::chr8:143814432..143814436,-#_f9794cd09802409fb779d0e69c79108bp@chr8:143814432..143814436, -
1.84e-34FFCP PHASE2:Hg19::chr4:24208460..24208464,-#_f9794cd09802409fb779d0e69c79108bp@chr4:24208460..24208464, -
1.84e-34FFCP PHASE1:Hg19::chr4:24208460..24208464,-#_f9794cd09802409fb779d0e69c79108bp@chr4:24208460..24208464, -
1.84e-34FFCP PHASE2:Hg19::chr7:55053540..55053550,+#_f9794cd09802409fb779d0e69c79108bp@chr7:55053540..55053550, +
1.84e-34FFCP PHASE1:Hg19::chr7:55053540..55053550,+#_f9794cd09802409fb779d0e69c79108bp@chr7:55053540..55053550, +
1.84e-34FFCP PHASE2:Hg19::chr8:143814432..143814436,-#_f9794cd09802409fb779d0e69c79108bp@chr8:143814432..143814436, -
1.84e-34FFCP PHASE2:Hg19::chr4:24232569..24232574,-#_f9794cd09802409fb779d0e69c79108bp@chr4:24232569..24232574, -
1.84e-34FFCP PHASE1:Hg19::chr4:24232569..24232574,-#_f9794cd09802409fb779d0e69c79108bp@chr4:24232569..24232574, -
2.58e-34FFCP PHASE2:Hg19::chr2:173374596..173374600,+#_bf3e01f073a912ab9d8697fa8a2e7b2ep@chr2:173374596..173374600, +
2.58e-34FFCP PHASE2:Hg19::chr7:98822527..98822533,+#_bf3e01f073a912ab9d8697fa8a2e7b2e+, p@chr7:98822527..98822533
2.58e-34FFCP PHASE1:Hg19::chr2:173374596..173374600,+#_bf3e01f073a912ab9d8697fa8a2e7b2ep@chr2:173374596..173374600, +
2.58e-34FFCP PHASE1:Hg19::chr7:98822527..98822533,+#_bf3e01f073a912ab9d8697fa8a2e7b2ep@chr7:98822527..98822533, +
3.61e-34FFCP PHASE2:Hg19::chr1:183178134..183178138,+#_1afd1134413b18b96c7aa71c60bd1584p@chr1:183178134..183178138, +
3.61e-34FFCP PHASE1:Hg19::chr1:183178134..183178138,+#_1afd1134413b18b96c7aa71c60bd1584p@chr1:183178134..183178138, +