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UBERON:0005256

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Name:trunk mesenchyme
Namespace:FANTOM
Xrefs:
links:

EFO:0003485
EHDAA2:0002092
EHDAA:377
EMAPA:16177
TAO:0000081
VHOG:0000281

ZFA:0000081
Subset: vertebrate_core

Ontology association
Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.

link to ontology dataset
data


Parents

is_a:UBERON:0003104(mesenchyme),UBERON:0005291(embryonic tissue)
part_of:UBERON:0000922(embryo),UBERON:0002100(trunk),UBERON:0000922(embryo),UBERON:0002100(trunk),UBERON:0009142(entire embryonic mesenchyme)



Children

is a:UBERON:0002062 (endocardial cushion),UBERON:0009618 (trunk paraxial mesoderm)
part of:UBERON:0003064 (intermediate mesoderm),UBERON:0009618 (trunk paraxial mesoderm)

Ontology Tree: Loaded from BioPortal


FF samples
It includes FANTOM5 samples that overlay the Uberon ontology




Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005256 (trunk mesenchyme), sorted by p-values
Analyst: Hideya Kawaji

link to source dataset
human : data
mouse : data


P-valueFFCPShort description
8.85e-34FFCP PHASE1:Mm9::chr5:90897694..90897705,+#_297845d3c8a7ff0d0c2af35574649541p@chr5:90897694..90897705, +
8.85e-34FFCP PHASE2:Mm9::chr5:90897694..90897705,+#_297845d3c8a7ff0d0c2af35574649541p@chr5:90897694..90897705, +
1.18e-33FFCP PHASE1:Mm9::chr19:25169885..25169900,+#_09a70fcdf3caec4c1d28084971e04180p@chr19:25169885..25169900, +
1.18e-33FFCP PHASE2:Mm9::chr19:25169885..25169900,+#_09a70fcdf3caec4c1d28084971e04180p@chr19:25169885..25169900, +
1.31e-33FFCP PHASE1:Mm9::chr10:88996274..88996286,-#_dbc17f98e06f8a0f2b29e3207b463f89p4@Nr1h4
1.31e-33FFCP PHASE2:Mm9::chr10:88996274..88996286,-#_dbc17f98e06f8a0f2b29e3207b463f89p4@Nr1h4
2.01e-33FFCP PHASE2:Mm9::chr8:131012371..131012382,-#_2034b7dc59e46243961a1ceed4d8c571p2@uc009nzu.1
2.01e-33FFCP PHASE1:Mm9::chr8:131012371..131012382,-#_2034b7dc59e46243961a1ceed4d8c571p2@uc009nzu.1
2.01e-33FFCP PHASE2:Mm9::chr7:121912281..121912295,+#_2034b7dc59e46243961a1ceed4d8c571p6@Insc
2.01e-33FFCP PHASE1:Mm9::chr7:121912281..121912295,+#_2034b7dc59e46243961a1ceed4d8c571p6@Insc
1.52e-32FFCP PHASE1:Mm9::chr17:12588483..12588503,+#_9054f38e81167f62a9894c2c7dcc3913p@chr17:12588483..12588503, +
1.52e-32FFCP PHASE2:Mm9::chr17:12588483..12588503,+#_9054f38e81167f62a9894c2c7dcc3913p@chr17:12588483..12588503, +
2.21e-32FFCP PHASE2:Mm9::chr17:32822530..32822541,+#_23acca637a439a19f0fa5129f2bc9a1fp2@Cyp4f15
2.21e-32FFCP PHASE1:Mm9::chr17:32822530..32822541,+#_23acca637a439a19f0fa5129f2bc9a1fp2@Cyp4f15
6.2e-32FFCP PHASE1:Mm9::chr13:94407586..94407604,-#_78ca98627505bce798f8bd86fa26c1c0p5@Bhmt
6.2e-32FFCP PHASE2:Mm9::chr13:94407586..94407604,-#_78ca98627505bce798f8bd86fa26c1c0p5@Bhmt
8.94e-32FFCP PHASE1:Mm9::chr1:162917234..162917248,+#_adc3f0acb37b1be9376f3c98af7a2148p@chr1:162917234..162917248, +
8.94e-32FFCP PHASE2:Mm9::chr1:162917234..162917248,+#_adc3f0acb37b1be9376f3c98af7a2148p@chr1:162917234..162917248, +
1.01e-31FFCP PHASE1:Mm9::chr9:110892216..110892232,-#_5fae3a29782b3aa3c45758f0fff208f4p1@Rtp3
1.01e-31FFCP PHASE2:Mm9::chr9:110892216..110892232,-#_5fae3a29782b3aa3c45758f0fff208f4p1@Rtp3
1.34e-31FFCP PHASE1:Mm9::chr6:128436166..128436185,-#_3f4377175d2ffc09cd9261b4a7153950p@chr6:128436166..128436185, -
1.34e-31FFCP PHASE2:Mm9::chr12:105004018..105004046,-#_3f4377175d2ffc09cd9261b4a7153950-, p@chr12:105004018..105004046
1.34e-31FFCP PHASE1:Mm9::chr16:22894900..22894910,+#_3f4377175d2ffc09cd9261b4a7153950p@chr16:22894900..22894910, +
1.34e-31FFCP PHASE1:Mm9::chr16:22898981..22898988,-#_3f4377175d2ffc09cd9261b4a7153950p@chr16:22898981..22898988, -
1.34e-31FFCP PHASE2:Mm9::chr6:128436166..128436185,-#_3f4377175d2ffc09cd9261b4a7153950p@chr6:128436166..128436185, -
1.34e-31FFCP PHASE1:Mm9::chr2:10041210..10041222,-#_3f4377175d2ffc09cd9261b4a7153950p@chr2:10041210..10041222, -
1.34e-31FFCP PHASE2:Mm9::chr16:22894900..22894910,+#_3f4377175d2ffc09cd9261b4a7153950p@chr16:22894900..22894910, +
1.34e-31FFCP PHASE2:Mm9::chr16:22898981..22898988,-#_3f4377175d2ffc09cd9261b4a7153950p@chr16:22898981..22898988, -
1.34e-31FFCP PHASE1:Mm9::chr12:105004018..105004046,-#_3f4377175d2ffc09cd9261b4a7153950p@chr12:105004018..105004046, -
1.34e-31FFCP PHASE2:Mm9::chr2:10041210..10041222,-#_3f4377175d2ffc09cd9261b4a7153950p@chr2:10041210..10041222, -
1.34e-31FFCP PHASE2:Mm9::chr3:19885632..19885643,+#_3f4377175d2ffc09cd9261b4a7153950p@chr3:19885632..19885643, +
1.34e-31FFCP PHASE1:Mm9::chr3:19885632..19885643,+#_3f4377175d2ffc09cd9261b4a7153950p@chr3:19885632..19885643, +
1.51e-31FFCP PHASE2:Mm9::chr13:23928766..23928779,+#_edad125854cd0966ac29a460097a3f82p@chr13:23928766..23928779, +
1.51e-31FFCP PHASE1:Mm9::chr13:23928766..23928779,+#_edad125854cd0966ac29a460097a3f82p@chr13:23928766..23928779, +
1.58e-31FFCP PHASE1:Mm9::chr9:110892239..110892252,-#_1d9e73cc83d54f02486aae60a50ecc8fp2@Rtp3
1.58e-31FFCP PHASE1:Mm9::chr7:112744083..112744109,-#_1d9e73cc83d54f02486aae60a50ecc8fp@chr7:112744083..112744109, -
1.58e-31FFCP PHASE2:Mm9::chr9:110892239..110892252,-#_1d9e73cc83d54f02486aae60a50ecc8fp2@Rtp3
1.58e-31FFCP PHASE2:Mm9::chr7:112744083..112744109,-#_1d9e73cc83d54f02486aae60a50ecc8fp@chr7:112744083..112744109, -
1.65e-31FFCP PHASE2:Mm9::chr16:93929757..93929773,-#_96969abfb68383396dac07108f396ae1p1@Cldn14
1.65e-31FFCP PHASE1:Mm9::chr7:28237436..28237488,+#_96969abfb68383396dac07108f396ae1p3@Blvrb
1.65e-31FFCP PHASE1:Mm9::chr16:93929757..93929773,-#_96969abfb68383396dac07108f396ae1p1@Cldn14
1.65e-31FFCP PHASE2:Mm9::chr7:28237436..28237488,+#_96969abfb68383396dac07108f396ae1p3@Blvrb
4.64e-31FFCP PHASE2:Mm9::chr3:19889134..19889149,+#_fd49ef486690a81679795a21d5e94fa0p9@Cp
4.64e-31FFCP PHASE1:Mm9::chr3:19889134..19889149,+#_fd49ef486690a81679795a21d5e94fa0p9@Cp
5.17e-31FFCP PHASE2:Mm9::chr16:90738753..90738764,+#_aab107b1a75a6b74ea7b849a2fbde6efp9@Mrap
5.17e-31FFCP PHASE1:Mm9::chr16:90738753..90738764,+#_aab107b1a75a6b74ea7b849a2fbde6efp9@Mrap
4.06e-30FFCP PHASE2:Mm9::chr1:173155793..173155841,+#_57f6a6a355847bcda0067935f149c9b1p@chr1:173155793..173155841, +
4.06e-30FFCP PHASE1:Mm9::chr1:173155793..173155841,+#_57f6a6a355847bcda0067935f149c9b1p@chr1:173155793..173155841, +
4.4e-30FFCP PHASE2:Mm9::chr17:12584645..12584657,+#_4510ebc41462425c8e788c1228c5ff36p@chr17:12584645..12584657, +
4.4e-30FFCP PHASE1:Mm9::chr17:12584645..12584657,+#_4510ebc41462425c8e788c1228c5ff36p@chr17:12584645..12584657, +
4.77e-30FFCP PHASE2:Mm9::chr1:166179426..166179437,+#_302b0bbac658c8afa9b00ad393279cd9p@chr1:166179426..166179437, +
4.77e-30FFCP PHASE1:Mm9::chr1:166179426..166179437,+#_302b0bbac658c8afa9b00ad393279cd9p@chr1:166179426..166179437, +
6.77e-30FFCP PHASE2:Mm9::chr6:37480157..37480158,+#_0111a79b11f040b7f0248ade3a319123p4@Akr1d1
6.77e-30FFCP PHASE2:Mm9::chr7:121912266..121912277,+#_0111a79b11f040b7f0248ade3a319123p8@Insc
6.77e-30FFCP PHASE1:Mm9::chr6:37480157..37480158,+#_0111a79b11f040b7f0248ade3a319123p4@Akr1d1
6.77e-30FFCP PHASE1:Mm9::chr7:121912266..121912277,+#_0111a79b11f040b7f0248ade3a319123p8@Insc
7.36e-30FFCP PHASE2:Mm9::chr5:90893974..90893978,+#_3ed8d78fdc734389ff9e769bea6933b5p@chr5:90893974..90893978, +
7.36e-30FFCP PHASE1:Mm9::chr5:90893974..90893978,+#_3ed8d78fdc734389ff9e769bea6933b5p@chr5:90893974..90893978, +
7.71e-30FFCP PHASE2:Mm9::chr19:38191263..38191291,-#_1500bc88dc8581b5b8100f7e1b955543p@chr19:38191263..38191291, -
7.71e-30FFCP PHASE1:Mm9::chr19:38191263..38191291,-#_1500bc88dc8581b5b8100f7e1b955543p@chr19:38191263..38191291, -
8.79e-30FFCP PHASE2:Mm9::chr6:128436196..128436215,-#_9dd5efffda37d7a692a8f43602c45117p@chr6:128436196..128436215, -
8.79e-30FFCP PHASE2:Mm9::chr6:128438012..128438027,-#_9dd5efffda37d7a692a8f43602c45117p@chr6:128438012..128438027, -
8.79e-30FFCP PHASE1:Mm9::chr6:128436196..128436215,-#_9dd5efffda37d7a692a8f43602c45117p@chr6:128436196..128436215, -
8.79e-30FFCP PHASE1:Mm9::chr6:128438012..128438027,-#_9dd5efffda37d7a692a8f43602c45117p@chr6:128438012..128438027, -
8.79e-30FFCP PHASE2:Mm9::chr12:105002005..105002050,-#_9dd5efffda37d7a692a8f43602c45117p@chr12:105002005..105002050, -
8.79e-30FFCP PHASE2:Mm9::chr12:105003025..105003036,-#_9dd5efffda37d7a692a8f43602c45117p@chr12:105003025..105003036, -
8.79e-30FFCP PHASE2:Mm9::chr12:105066241..105066272,-#_9dd5efffda37d7a692a8f43602c45117p1@Serpina1b
8.79e-30FFCP PHASE2:Mm9::chr11:46512551..46512577,-#_9dd5efffda37d7a692a8f43602c45117p5@Timd2
8.79e-30FFCP PHASE2:Mm9::chr16:22895286..22895297,-#_9dd5efffda37d7a692a8f43602c45117p@chr16:22895286..22895297, -
8.79e-30FFCP PHASE2:Mm9::chr16:22899236..22899246,+#_9dd5efffda37d7a692a8f43602c45117p@chr16:22899236..22899246, +
8.79e-30FFCP PHASE2:Mm9::chr16:22899322..22899331,+#_9dd5efffda37d7a692a8f43602c45117p@chr16:22899322..22899331, +
8.79e-30FFCP PHASE1:Mm9::chr12:105002005..105002050,-#_9dd5efffda37d7a692a8f43602c45117p@chr12:105002005..105002050, -
8.79e-30FFCP PHASE1:Mm9::chr12:105003025..105003036,-#_9dd5efffda37d7a692a8f43602c45117p@chr12:105003025..105003036, -
8.79e-30FFCP PHASE1:Mm9::chr12:105066241..105066272,-#_9dd5efffda37d7a692a8f43602c45117p1@Serpina1b
8.79e-30FFCP PHASE2:Mm9::chr7:30124207..30124222,-#_9dd5efffda37d7a692a8f43602c45117p@chr7:30124207..30124222, -
8.79e-30FFCP PHASE2:Mm9::chr6:11948347..11948351,-#_9dd5efffda37d7a692a8f43602c45117p@chr6:11948347..11948351, -
8.79e-30FFCP PHASE1:Mm9::chr6:11948347..11948351,-#_9dd5efffda37d7a692a8f43602c45117p@chr6:11948347..11948351, -
8.79e-30FFCP PHASE1:Mm9::chr16:22895286..22895297,-#_9dd5efffda37d7a692a8f43602c45117p@chr16:22895286..22895297, -
8.79e-30FFCP PHASE1:Mm9::chr16:22899236..22899246,+#_9dd5efffda37d7a692a8f43602c45117p@chr16:22899236..22899246, +
8.79e-30FFCP PHASE1:Mm9::chr16:22899322..22899331,+#_9dd5efffda37d7a692a8f43602c45117p@chr16:22899322..22899331, +
8.79e-30FFCP PHASE1:Mm9::chr7:30124207..30124222,-#_9dd5efffda37d7a692a8f43602c45117p@chr7:30124207..30124222, -
8.79e-30FFCP PHASE1:Mm9::chr11:46512551..46512577,-#_9dd5efffda37d7a692a8f43602c45117p5@Timd2
8.79e-30FFCP PHASE2:Mm9::chr3:82847318..82847329,-#_9dd5efffda37d7a692a8f43602c45117p@chr3:82847318..82847329, -
8.79e-30FFCP PHASE1:Mm9::chr3:82847318..82847329,-#_9dd5efffda37d7a692a8f43602c45117p@chr3:82847318..82847329, -
9.07e-30FFCP PHASE2:Mm9::chr8:131012475..131012492,-#_8b83e376d3a5285b1d5f181354f5c77dp1@uc009nzu.1
9.07e-30FFCP PHASE1:Mm9::chr8:131012475..131012492,-#_8b83e376d3a5285b1d5f181354f5c77dp1@uc009nzu.1
9.31e-30FFCP PHASE1:Mm9::chr8:92849825..92849837,-#_ab557942ac206f4c7dd0c782831241a7p@chr8:92849825..92849837, -
9.31e-30FFCP PHASE2:Mm9::chr3:82835513..82835525,+#_ab557942ac206f4c7dd0c782831241a7p@chr3:82835513..82835525, +
9.31e-30FFCP PHASE1:Mm9::chr3:82835513..82835525,+#_ab557942ac206f4c7dd0c782831241a7p@chr3:82835513..82835525, +
9.31e-30FFCP PHASE2:Mm9::chr15:77605636..77605639,+#_ab557942ac206f4c7dd0c782831241a7p@chr15:77605636..77605639, +
9.31e-30FFCP PHASE2:Mm9::chr8:92849825..92849837,-#_ab557942ac206f4c7dd0c782831241a7p@chr8:92849825..92849837, -
9.31e-30FFCP PHASE2:Mm9::chr16:22895330..22895339,-#_ab557942ac206f4c7dd0c782831241a7p@chr16:22895330..22895339, -
9.31e-30FFCP PHASE2:Mm9::chr16:23449901..23449906,-#_ab557942ac206f4c7dd0c782831241a7p@chr16:23449901..23449906, -
9.31e-30FFCP PHASE1:Mm9::chr15:77605636..77605639,+#_ab557942ac206f4c7dd0c782831241a7p@chr15:77605636..77605639, +
9.31e-30FFCP PHASE1:Mm9::chr16:22895330..22895339,-#_ab557942ac206f4c7dd0c782831241a7p@chr16:22895330..22895339, -
9.31e-30FFCP PHASE1:Mm9::chr16:23449901..23449906,-#_ab557942ac206f4c7dd0c782831241a7p@chr16:23449901..23449906, -
9.46e-30FFCP PHASE2:Mm9::chr8:46380208..46380217,-#_990916735cb0b1853e3ccaac57401290p3@Klkb1
9.46e-30FFCP PHASE1:Mm9::chr8:46380208..46380217,-#_990916735cb0b1853e3ccaac57401290p3@Klkb1
9.86e-30FFCP PHASE1:Mm9::chr3:57191661..57191672,-#_c47e5b2edc76c825e78868c747467cd2p@chr3:57191661..57191672, -
9.86e-30FFCP PHASE2:Mm9::chr3:57191661..57191672,-#_c47e5b2edc76c825e78868c747467cd2p@chr3:57191661..57191672, -