Personal tools

UBERON:0005729

From FANTOM5_SSTAR

Revision as of 17:06, 26 June 2012 by Autoedit (talk | contribs)
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search

Name:forelimb/pectoral fin field
Xrefs:
links:

TAO:0001453

ZFA:0001453
Synonyms: "pectoral fin field" NARROW SENSU [ZFA:0001453]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0005732(limb/fin field)



Children

develops from:UBERON:0005419 (pectoral appendage bud)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology



Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005729 (forelimb/pectoral fin field), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.33e-86FFCP PHASE1:Mm9::chr2:74499300..74499309,-#_796db4672cb3506cc6dece42b9963344p5@Evx2
1.33e-86FFCP PHASE2:Mm9::chr2:74499300..74499309,-#_796db4672cb3506cc6dece42b9963344p5@Evx2
2.4e-74FFCP PHASE2:Mm9::chr5:120256413..120256428,-#_ccbf7c38c665da4c4dfc02f1e69c78b9p@chr5:120256413..120256428, -
2.4e-74FFCP PHASE1:Mm9::chr15:51484092..51484121,-#_ccbf7c38c665da4c4dfc02f1e69c78b9p@chr15:51484092..51484121, -
2.4e-74FFCP PHASE1:Mm9::chr5:120256413..120256428,-#_ccbf7c38c665da4c4dfc02f1e69c78b9p@chr5:120256413..120256428, -
2.4e-74FFCP PHASE2:Mm9::chr15:51484092..51484121,-#_ccbf7c38c665da4c4dfc02f1e69c78b9p@chr15:51484092..51484121, -
2.4e-74FFCP PHASE2:Mm9::chr2:165983686..165983720,-#_ccbf7c38c665da4c4dfc02f1e69c78b9p@chr2:165983686..165983720, -
2.4e-74FFCP PHASE1:Mm9::chr2:165983686..165983720,-#_ccbf7c38c665da4c4dfc02f1e69c78b9p@chr2:165983686..165983720, -
1.21e-61FFCP PHASE2:Mm9::chr2:74505324..74505330,+#_f413be44e81254f074788e4527bbb0d2p@chr2:74505324..74505330, +
1.21e-61FFCP PHASE1:Mm9::chr2:74505324..74505330,+#_f413be44e81254f074788e4527bbb0d2p@chr2:74505324..74505330, +
2.24e-61FFCP PHASE2:Mm9::chr2:74506264..74506286,+#_2341e42ee1dbd0fb27dc774902db96e0p1@Hoxd13
2.24e-61FFCP PHASE1:Mm9::chr2:74506264..74506286,+#_2341e42ee1dbd0fb27dc774902db96e0p1@Hoxd13
3.63e-52FFCP PHASE1:Mm9::chr2:74513064..74513089,+#_22527605b086300f2a6080ae9bee2cacp2@Hoxd12
3.63e-52FFCP PHASE2:Mm9::chr2:74513064..74513089,+#_22527605b086300f2a6080ae9bee2cacp2@Hoxd12
4.62e-52FFCP PHASE1:Mm9::chr2:74499251..74499258,-#_ac58d91f9cbf13493efe9d44d806b6d5p4@Evx2
4.62e-52FFCP PHASE2:Mm9::chr2:74499251..74499258,-#_ac58d91f9cbf13493efe9d44d806b6d5p4@Evx2
5.88e-52FFCP PHASE2:Mm9::chr2:33574246..33574257,-#_2659bb9dba3a17a9ed783f2ade04b859p3@ENSMUST00000130532
5.88e-52FFCP PHASE1:Mm9::chr2:33574246..33574257,-#_2659bb9dba3a17a9ed783f2ade04b859p3@ENSMUST00000130532
5.28e-50FFCP PHASE2:Mm9::chr2:74521516..74521525,+#_2ebf4eb77d6eaaa0ad80551efd4e084cp1@ENSMUST00000136302
5.28e-50FFCP PHASE1:Mm9::chr2:74521516..74521525,+#_2ebf4eb77d6eaaa0ad80551efd4e084cp1@ENSMUST00000136302
9.21e-50FFCP PHASE1:Mm9::chr6:51009701..51009744,-#_8ccfe8879a1061e7120cb23a631aa192p@chr6:51009701..51009744, -
9.21e-50FFCP PHASE2:Mm9::chr6:51009701..51009744,-#_8ccfe8879a1061e7120cb23a631aa192p@chr6:51009701..51009744, -
2.92e-48FFCP PHASE1:Mm9::chr10:97069737..97069749,+#_c57ff157929ee29db472aa2ced7b3ab6p5@Kera
2.92e-48FFCP PHASE2:Mm9::chr10:97069737..97069749,+#_c57ff157929ee29db472aa2ced7b3ab6p5@Kera
4.71e-48FFCP PHASE1:Mm9::chr6:52210816..52210831,-#_96063380ab29e3bb5a181ea41e983af2p2@Hoxa13
4.71e-48FFCP PHASE2:Mm9::chr6:52210816..52210831,-#_96063380ab29e3bb5a181ea41e983af2p2@Hoxa13
6.47e-48FFCP PHASE2:Mm9::chr2:74513149..74513159,+#_ebcd98b320f67aa43ff865f22afa9766p@chr2:74513149..74513159, +
6.47e-48FFCP PHASE1:Mm9::chr2:74513149..74513159,+#_ebcd98b320f67aa43ff865f22afa9766p@chr2:74513149..74513159, +
1.4e-44FFCP PHASE1:Mm9::chr1:165288513..165288518,+#_3f523a022ec8cb75852cbad68f0c1667p@chr1:165288513..165288518, +
1.4e-44FFCP PHASE2:Mm9::chr1:165288513..165288518,+#_3f523a022ec8cb75852cbad68f0c1667p@chr1:165288513..165288518, +
2.07e-41FFCP PHASE2:Mm9::chr1:164064835..164064864,-#_5a9c5d5963be7745a8305be474470a05p3@Dnm3
2.07e-41FFCP PHASE1:Mm9::chr1:164064835..164064864,-#_5a9c5d5963be7745a8305be474470a05p3@Dnm3
2.91e-40FFCP PHASE2:Mm9::chr2:33574267..33574279,-#_ec4428332f566d0f79935b272d80b387p1@ENSMUST00000130532
2.91e-40FFCP PHASE1:Mm9::chr2:33574267..33574279,-#_ec4428332f566d0f79935b272d80b387p1@ENSMUST00000130532
3.67e-40FFCP PHASE2:Mm9::chr2:33574309..33574319,-#_3525d98f9104699da233ed4e818affd8p4@ENSMUST00000130532
3.67e-40FFCP PHASE1:Mm9::chr2:33574309..33574319,-#_3525d98f9104699da233ed4e818affd8p4@ENSMUST00000130532
5.46e-39FFCP PHASE2:Mm9::chr6:52195000..52195013,+#_409a6455bb03cbc4b8a9c5f4553cdaafp3@Hoxa11as
5.46e-39FFCP PHASE1:Mm9::chr6:52195000..52195013,+#_409a6455bb03cbc4b8a9c5f4553cdaafp3@Hoxa11as
6.59e-38FFCP PHASE1:Mm9::chr2:74512009..74512012,+#_792a1413e14cdef7cf687e5c8973cae7p@chr2:74512009..74512012, +
6.59e-38FFCP PHASE2:Mm9::chr2:74512009..74512012,+#_792a1413e14cdef7cf687e5c8973cae7p@chr2:74512009..74512012, +
1.94e-35FFCP PHASE2:Mm9::chr2:33496847..33496857,+#_b8f072728f3db38ab95468d09f240a84p3@ENSMUST00000147294, p3@uc008jia.1
1.94e-35FFCP PHASE1:Mm9::chr2:33496847..33496857,+#_b8f072728f3db38ab95468d09f240a84p3@ENSMUST00000147294, p3@uc008jia.1
9.74e-35FFCP PHASE2:Mm9::chr13:89680110..89680115,+#_513a65975bad188b24ecd96a45d2d056p6@Hapln1
9.74e-35FFCP PHASE1:Mm9::chr13:89680110..89680115,+#_513a65975bad188b24ecd96a45d2d056p6@Hapln1
2.95e-34FFCP PHASE1:Mm9::chr9:96754986..96754989,-#_47eaff4c3d7bfa26d810072c1533d594p3@Acpl2
2.95e-34FFCP PHASE2:Mm9::chr9:96754986..96754989,-#_47eaff4c3d7bfa26d810072c1533d594p3@Acpl2
6.28e-34FFCP PHASE2:Mm9::chr8:23734491..23734495,+#_e582814e14276f143dfea2abb8cae021p1@Dkk4
6.28e-34FFCP PHASE1:Mm9::chr8:23734491..23734495,+#_e582814e14276f143dfea2abb8cae021p1@Dkk4
7.62e-34FFCP PHASE2:Mm9::chr2:155770985..155770995,-#_65d387632868d980295427060358f195p2@Gdf5
7.62e-34FFCP PHASE1:Mm9::chr2:155770985..155770995,-#_65d387632868d980295427060358f195p2@Gdf5
2.0e-33FFCP PHASE1:Mm9::chr18:80910310..80910329,-#_e62a1c7a28743552e9cc871206f1d5d6p@chr18:80910310..80910329, -
2.0e-33FFCP PHASE2:Mm9::chr18:80910310..80910329,-#_e62a1c7a28743552e9cc871206f1d5d6p@chr18:80910310..80910329, -
1.89e-32FFCP PHASE2:Mm9::chr6:52210774..52210787,-#_cbc1c0f8ac7676ce7abf88c3ff394d7fp1@Hoxa13
1.89e-32FFCP PHASE1:Mm9::chr6:52210774..52210787,-#_cbc1c0f8ac7676ce7abf88c3ff394d7fp1@Hoxa13
6.43e-32FFCP PHASE2:Mm9::chr2:33498116..33498124,+#_1aa813453b34c1ce9b0f0feedc4eae68p@chr2:33498116..33498124, +
6.43e-32FFCP PHASE1:Mm9::chr2:33498116..33498124,+#_1aa813453b34c1ce9b0f0feedc4eae68p@chr2:33498116..33498124, +
7.44e-32FFCP PHASE2:Mm9::chr2:33496574..33496588,+#_ee1c1ccbcaf7a80551f0ad91db845bd5p4@ENSMUST00000152118, p4@uc008jhz.1
7.44e-32FFCP PHASE1:Mm9::chr2:33496574..33496588,+#_ee1c1ccbcaf7a80551f0ad91db845bd5p4@ENSMUST00000152118, p4@uc008jhz.1
1.09e-30FFCP PHASE1:Mm9::chr2:74520075..74520087,+#_114205f2f033accc63693fd19cbd9762p6@Hoxd11
1.09e-30FFCP PHASE2:Mm9::chr2:74520075..74520087,+#_114205f2f033accc63693fd19cbd9762p6@Hoxd11
2.22e-30FFCP PHASE1:Mm9::chr12:34649201..34649205,+#_d1fa8f1e479d51f4ca2bbc652e571417p@chr12:34649201..34649205, +
2.22e-30FFCP PHASE2:Mm9::chr12:34649201..34649205,+#_d1fa8f1e479d51f4ca2bbc652e571417p@chr12:34649201..34649205, +
1.6e-29FFCP PHASE2:Mm9::chr5:120285104..120285113,+#_96943e3436279d52d2427854795e9a11p5@Tbx5
1.6e-29FFCP PHASE1:Mm9::chr5:120285104..120285113,+#_96943e3436279d52d2427854795e9a11p5@Tbx5
4.13e-29FFCP PHASE2:Mm9::chr5:120246556..120246565,+#_854edb8bf793110d3951a551dc5ff7fep@chr5:120246556..120246565, +
4.13e-29FFCP PHASE1:Mm9::chr5:120246556..120246565,+#_854edb8bf793110d3951a551dc5ff7fep@chr5:120246556..120246565, +
4.91e-29FFCP PHASE2:Mm9::chr5:120246522..120246553,+#_df4c8d178a52780ab38e4f7f3920a3e7p@chr5:120246522..120246553, +
4.91e-29FFCP PHASE1:Mm9::chr5:120246522..120246553,+#_df4c8d178a52780ab38e4f7f3920a3e7p@chr5:120246522..120246553, +
5.59e-29FFCP PHASE2:Mm9::chr16:77329743..77329754,+#_10c8442e298a0495facd321c02e09636p14@2810055G20Rik
5.59e-29FFCP PHASE1:Mm9::chr16:77329743..77329754,+#_10c8442e298a0495facd321c02e09636p14@2810055G20Rik
8.27e-29FFCP PHASE1:Mm9::chr3:29912310..29912321,-#_1a31b6f0dee593ecf506326ed653f0b9p23@Mecom
8.27e-29FFCP PHASE2:Mm9::chr3:29912310..29912321,-#_1a31b6f0dee593ecf506326ed653f0b9p23@Mecom
6.5e-28FFCP PHASE2:Mm9::chr3:99044251..99044260,+#_aa887f8bab030ae4d0cd079fac79b239p8@Tbx15
6.5e-28FFCP PHASE1:Mm9::chr3:99044251..99044260,+#_aa887f8bab030ae4d0cd079fac79b239p8@Tbx15
3.95e-27FFCP PHASE2:Mm9::chr15:97807283..97807309,-#_7baa5896517d91f0a09d49bb8b065d07p@chr15:97807283..97807309, -
3.95e-27FFCP PHASE1:Mm9::chr15:97807283..97807309,-#_7baa5896517d91f0a09d49bb8b065d07p@chr15:97807283..97807309, -
5.23e-27FFCP PHASE2:Mm9::chr1:165244244..165244254,-#_5ad3bbbd6b76a83b994b2e50957b7a4ep8@Prrx1
5.23e-27FFCP PHASE1:Mm9::chr1:165244244..165244254,-#_5ad3bbbd6b76a83b994b2e50957b7a4ep8@Prrx1
1.4e-26FFCP PHASE2:Mm9::chr5:42155277..42155281,-#_1f8b18a059cde51dea3baa3d7ebd01b9p2@Nkx3-2
1.4e-26FFCP PHASE1:Mm9::chr5:42155277..42155281,-#_1f8b18a059cde51dea3baa3d7ebd01b9p2@Nkx3-2
1.64e-26FFCP PHASE1:Mm9::chr16:95807232..95807250,-#_7b7789c3c956d7aff5567210385bc183p@chr16:95807232..95807250, -
1.64e-26FFCP PHASE2:Mm9::chr16:95807232..95807250,-#_7b7789c3c956d7aff5567210385bc183p@chr16:95807232..95807250, -
7.57e-26FFCP PHASE2:Mm9::chr3:37606335..37606337,-#_95e217adb3a18c35504a73792a897ecbp@chr3:37606335..37606337, -
7.57e-26FFCP PHASE1:Mm9::chr3:37606335..37606337,-#_95e217adb3a18c35504a73792a897ecbp@chr3:37606335..37606337, -
7.57e-26FFCP PHASE1:Mm9::chr3:86116124..86116132,+#_95e217adb3a18c35504a73792a897ecbp@chr3:86116124..86116132, +
7.57e-26FFCP PHASE1:Mm9::chr4:125973415..125973418,+#_95e217adb3a18c35504a73792a897ecbp@chr4:125973415..125973418, +
7.57e-26FFCP PHASE2:Mm9::chr3:86116124..86116132,+#_95e217adb3a18c35504a73792a897ecbp@chr3:86116124..86116132, +
7.57e-26FFCP PHASE2:Mm9::chr4:125973415..125973418,+#_95e217adb3a18c35504a73792a897ecbp@chr4:125973415..125973418, +
1.07e-25FFCP PHASE1:Mm9::chr17:68300324..68300336,-#_622694500276868d8555a130c09c0774p5@Arhgap28
1.07e-25FFCP PHASE2:Mm9::chr17:68300324..68300336,-#_622694500276868d8555a130c09c0774p5@Arhgap28
2.33e-25FFCP PHASE2:Mm9::chr7:75096968..75096978,+#_2017bada5cb3ede628b5db0fa0654186p9@Igf1r
2.33e-25FFCP PHASE1:Mm9::chr7:75096968..75096978,+#_2017bada5cb3ede628b5db0fa0654186p9@Igf1r
2.93e-25FFCP PHASE2:Mm9::chr15:101936581..101936594,+#_7e44ba20457e46752e72d6168551d559p@chr15:101936581..101936594, +
2.93e-25FFCP PHASE1:Mm9::chr15:101936581..101936594,+#_7e44ba20457e46752e72d6168551d559p@chr15:101936581..101936594, +
2.99e-25FFCP PHASE1:Mm9::chr17:23882313..23882330,-#_3099cfb78926f581a9690a8039ec55a5p@chr17:23882313..23882330, -
2.99e-25FFCP PHASE2:Mm9::chr17:23882313..23882330,-#_3099cfb78926f581a9690a8039ec55a5p@chr17:23882313..23882330, -
3.52e-25FFCP PHASE2:Mm9::chr2:155771018..155771042,-#_ac14d0d28554a41043b7ab3464ecd74fp1@Gdf5
3.52e-25FFCP PHASE1:Mm9::chr2:155771018..155771042,-#_ac14d0d28554a41043b7ab3464ecd74fp1@Gdf5
2.77e-24FFCP PHASE1:Mm9::chr15:77137392..77137399,-#_2868125d5f8d460e2a83fbd2a6fcf022p16@Rbfox2
2.77e-24FFCP PHASE2:Mm9::chr15:77137392..77137399,-#_2868125d5f8d460e2a83fbd2a6fcf022p16@Rbfox2










Property "Property value" (as page type) with input value "UBPROP:0000001 "Embryonic region that develops into the pectoral fin bud.[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=UBERON:0005729&oldid=1836156"