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{{UBERON
{{UBERON
|id=UBERON:0005734
|name=tunica adventitia
|namespace=
|def="The tunica externa, also known as the tunica adventitia, is the outermost layer of a blood vessel, surrounding the tunica media. It is mainly composed of collagen. The collagen serves to anchor the blood vessel to nearby organs, giving it stability." [Wikipedia:Tunica_externa_%28vessels%29]
|xref=ncithesaurus:Tunica_Adventitia;;SCTID:30180000
|is_a=UBERON:0005742
|synonym="adventitia externa" EXACT [Wikipedia:Tunica_externa_%28vessels%29];;"external coat" RELATED [Wikipedia:Tunica_externa_%28vessels%29];;"tunica adventitia of vessel" EXACT [Wikipedia:Tunica_externa_%28vessels%29]
|comment=TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa = adventitia, and is FMA adventitia covers other kinds of vessels. Here we opt for a lengthier name that attempts to disambiguate. There is no precise FMA equivalent, as FMA has tunica externa of arteries, veins, genital ducts etc as siblings
|alt_id=
|alt_id=
|disjoint_from=
|comment=TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def="The outermost layer of a blood vessel, surrounding the tunica media. It is mainly composed of collagen. The collagen serves to anchor the blood vessel to nearby organs, giving it stability." [Wikipedia:Tunica_externa_%28vessels%29]
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005734
|is_a=UBERON:0004797 ;;UBERON:0005742
|is_obsolete=
|located_in=
|located_in=
|part_of=UBERON:0000055
|name=tunica adventitia of blood vessel
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.obo.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|namespace=FANTOM
|obo_creation_date=
|part_of=
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/cl-to-uberon.owl;;IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="adventitia externa" EXACT [Wikipedia:Tunica_externa_%28vessels%29];;"external coat" RELATED [Wikipedia:Tunica_externa_%28vessels%29];;"tunica adventitia of vessel" EXACT [Wikipedia:Tunica_externa_%28vessels%29];;"tunica externa vasorum, tunica adventitia vasorum" RELATED LATIN [Wikipedia:Tunica_externa_%28vessels%29]
|union_of=
|xref=http://upload.wikimedia.org/wikipedia/commons/3/32/Illu_artery.jpg;;ncithesaurus:Tunica_Adventitia;;SCTID:30180000
}}
}}

Latest revision as of 17:54, 12 September 2014

Name:tunica adventitia of blood vessel
Namespace:FANTOM
Definition:"The outermost layer of a blood vessel, surrounding the tunica media. It is mainly composed of collagen. The collagen serves to anchor the blood vessel to nearby organs, giving it stability." [Wikipedia:Tunica_externa_%28vessels%29]
Xrefs:
links:

[1]
ncithesaurus:Tunica_Adventitia

SCTID:30180000
Synonyms: "adventitia externa" EXACT [Wikipedia:Tunica_externa_%28vessels%29]
"external coat" RELATED [Wikipedia:Tunica_externa_%28vessels%29]
"tunica adventitia of vessel" EXACT [Wikipedia:Tunica_externa_%28vessels%29]
"tunica externa vasorum, tunica adventitia vasorum" RELATED LATIN [Wikipedia:Tunica_externa_%28vessels%29]
Comments:TODO - note terminological problems. WP says tunica external layer of blood vessel. FMA says tunica externa

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0004797(blood vessel layer),UBERON:0005742(adventitia)



Children

is a:UBERON:0004664 (aorta tunica adventitia),UBERON:0007240 (tunica adventitia of artery)
part of:CL:1000306 (fibroblast of tunica adventitia of artery)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005734 (tunica adventitia of blood vessel), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
2.01e-74FFCP PHASE1:Hg19::chr4:67298860..67298867,-#_dfa700afe2de2407398c607a900a5068p@chr4:67298860..67298867, -
2.01e-74FFCP PHASE2:Hg19::chr4:67298860..67298867,-#_dfa700afe2de2407398c607a900a5068p@chr4:67298860..67298867, -
2.4e-66FFCP PHASE2:Hg19::chr5:93904635..93904644,+#_30cc8d5644a1e793950de934cc03e68bp@chr5:93904635..93904644, +
2.4e-66FFCP PHASE1:Hg19::chr7:22687639..22687644,+#_30cc8d5644a1e793950de934cc03e68bp@chr7:22687639..22687644, +
2.4e-66FFCP PHASE2:Hg19::chr7:22687639..22687644,+#_30cc8d5644a1e793950de934cc03e68bp@chr7:22687639..22687644, +
2.4e-66FFCP PHASE1:Hg19::chr5:93904635..93904644,+#_30cc8d5644a1e793950de934cc03e68bp@chr5:93904635..93904644, +
3.35e-66FFCP PHASE2:Hg19::chr11:29207409..29207435,+#_a0d12692733eda23e9d3ca539a144249p@chr11:29207409..29207435, +
3.35e-66FFCP PHASE1:Hg19::chr11:29207409..29207435,+#_a0d12692733eda23e9d3ca539a144249p@chr11:29207409..29207435, +
5.94e-56FFCP PHASE1:Hg19::chr3:46607836..46607847,-#_5149c58db88b24e351626a17172e0bdap5@LRRC2
5.94e-56FFCP PHASE2:Hg19::chr3:46607836..46607847,-#_5149c58db88b24e351626a17172e0bdap5@LRRC2
3.1e-50FFCP PHASE2:Hg19::chr14:23158454..23158473,-#_e09a1af5290384b3b9385aeb19820034p@chr14:23158454..23158473, -
3.1e-50FFCP PHASE2:Hg19::chr1:226851965..226851967,+#_e09a1af5290384b3b9385aeb19820034p@chr1:226851965..226851967, +
3.1e-50FFCP PHASE1:Hg19::chr5:163602194..163602199,-#_e09a1af5290384b3b9385aeb19820034p@chr5:163602194..163602199, -
3.1e-50FFCP PHASE1:Hg19::chr5:37772283..37772287,+#_e09a1af5290384b3b9385aeb19820034p@chr5:37772283..37772287, +
3.1e-50FFCP PHASE1:Hg19::chr3:156878186..156878199,-#_e09a1af5290384b3b9385aeb19820034p71@CCNL1
3.1e-50FFCP PHASE1:Hg19::chr3:141105574..141105581,-#_e09a1af5290384b3b9385aeb19820034p@chr3:141105574..141105581, -
3.1e-50FFCP PHASE1:Hg19::chr19:43584268..43584275,+#_e09a1af5290384b3b9385aeb19820034p@chr19:43584268..43584275, +
3.1e-50FFCP PHASE1:Hg19::chr8:123376383..123376386,+#_e09a1af5290384b3b9385aeb19820034p@chr8:123376383..123376386, +
3.1e-50FFCP PHASE1:Hg19::chr2:18807662..18807665,-#_e09a1af5290384b3b9385aeb19820034p@chr2:18807662..18807665, -
3.1e-50FFCP PHASE2:Hg19::chr19:43584268..43584275,+#_e09a1af5290384b3b9385aeb19820034p@chr19:43584268..43584275, +
3.1e-50FFCP PHASE2:Hg19::chr2:18807662..18807665,-#_e09a1af5290384b3b9385aeb19820034p@chr2:18807662..18807665, -
3.1e-50FFCP PHASE1:Hg19::chr8:129522281..129522284,-#_e09a1af5290384b3b9385aeb19820034p@chr8:129522281..129522284, -
3.1e-50FFCP PHASE2:Hg19::chr5:163602194..163602199,-#_e09a1af5290384b3b9385aeb19820034p@chr5:163602194..163602199, -
3.1e-50FFCP PHASE2:Hg19::chr5:37772283..37772287,+#_e09a1af5290384b3b9385aeb19820034p@chr5:37772283..37772287, +
3.1e-50FFCP PHASE1:Hg19::chr2:162943708..162943739,+#_e09a1af5290384b3b9385aeb19820034p@chr2:162943708..162943739, +
3.1e-50FFCP PHASE1:Hg19::chr5:14109718..14109721,+#_e09a1af5290384b3b9385aeb19820034p@chr5:14109718..14109721, +
3.1e-50FFCP PHASE1:Hg19::chr21:28955184..28955188,+#_e09a1af5290384b3b9385aeb19820034p@chr21:28955184..28955188, +
3.1e-50FFCP PHASE1:Hg19::chr8:107870700..107870705,-#_e09a1af5290384b3b9385aeb19820034p@chr8:107870700..107870705, -
3.1e-50FFCP PHASE2:Hg19::chr10:54248451..54248453,-#_e09a1af5290384b3b9385aeb19820034p@chr10:54248451..54248453, -
3.1e-50FFCP PHASE2:Hg19::chr3:156878186..156878199,-#_e09a1af5290384b3b9385aeb19820034p71@CCNL1
3.1e-50FFCP PHASE1:Hg19::chr3:29800057..29800074,+#_e09a1af5290384b3b9385aeb19820034p@chr3:29800057..29800074, +
3.1e-50FFCP PHASE1:Hg19::chr6:57128349..57128352,+#_e09a1af5290384b3b9385aeb19820034p@chr6:57128349..57128352, +
3.1e-50FFCP PHASE2:Hg19::chr2:162943708..162943739,+#_e09a1af5290384b3b9385aeb19820034p@chr2:162943708..162943739, +
3.1e-50FFCP PHASE2:Hg19::chr3:141105574..141105581,-#_e09a1af5290384b3b9385aeb19820034p@chr3:141105574..141105581, -
3.1e-50FFCP PHASE2:Hg19::chr8:123376383..123376386,+#_e09a1af5290384b3b9385aeb19820034p@chr8:123376383..123376386, +
3.1e-50FFCP PHASE1:Hg19::chr2:55327810..55327812,-#_e09a1af5290384b3b9385aeb19820034p@chr2:55327810..55327812, -
3.1e-50FFCP PHASE1:Hg19::chr1:199267284..199267291,+#_e09a1af5290384b3b9385aeb19820034p@chr1:199267284..199267291, +
3.1e-50FFCP PHASE1:Hg19::chr7:47835322..47835327,-#_e09a1af5290384b3b9385aeb19820034p@chr7:47835322..47835327, -
3.1e-50FFCP PHASE1:Hg19::chr3:98699947..98699957,-#_e09a1af5290384b3b9385aeb19820034p@chr3:98699947..98699957, -
3.1e-50FFCP PHASE2:Hg19::chr6:57128349..57128352,+#_e09a1af5290384b3b9385aeb19820034p@chr6:57128349..57128352, +
3.1e-50FFCP PHASE1:Hg19::chr1:219498496..219498503,-#_e09a1af5290384b3b9385aeb19820034p@chr1:219498496..219498503, -
3.1e-50FFCP PHASE2:Hg19::chr8:129522281..129522284,-#_e09a1af5290384b3b9385aeb19820034p@chr8:129522281..129522284, -
3.1e-50FFCP PHASE1:Hg19::chr10:54248451..54248453,-#_e09a1af5290384b3b9385aeb19820034p@chr10:54248451..54248453, -
3.1e-50FFCP PHASE2:Hg19::chr11:29331768..29331769,-#_e09a1af5290384b3b9385aeb19820034p@chr11:29331768..29331769, -
3.1e-50FFCP PHASE1:Hg19::chr11:29331768..29331769,-#_e09a1af5290384b3b9385aeb19820034p@chr11:29331768..29331769, -
3.1e-50FFCP PHASE2:Hg19::chr5:14109718..14109721,+#_e09a1af5290384b3b9385aeb19820034p@chr5:14109718..14109721, +
3.1e-50FFCP PHASE2:Hg19::chr21:28955184..28955188,+#_e09a1af5290384b3b9385aeb19820034p@chr21:28955184..28955188, +
3.1e-50FFCP PHASE1:Hg19::chr2:216588131..216588134,+#_e09a1af5290384b3b9385aeb19820034p@chr2:216588131..216588134, +
3.1e-50FFCP PHASE1:Hg19::chr9:118413835..118413843,-#_e09a1af5290384b3b9385aeb19820034p@chr9:118413835..118413843, -
3.1e-50FFCP PHASE2:Hg19::chr8:107870700..107870705,-#_e09a1af5290384b3b9385aeb19820034p@chr8:107870700..107870705, -
3.1e-50FFCP PHASE1:Hg19::chr14:68614207..68614210,-#_e09a1af5290384b3b9385aeb19820034p@chr14:68614207..68614210, -
3.1e-50FFCP PHASE1:Hg19::chr2:151537893..151537898,-#_e09a1af5290384b3b9385aeb19820034p@chr2:151537893..151537898, -
3.1e-50FFCP PHASE2:Hg19::chr3:29800057..29800074,+#_e09a1af5290384b3b9385aeb19820034p@chr3:29800057..29800074, +
3.1e-50FFCP PHASE2:Hg19::chr7:47835322..47835327,-#_e09a1af5290384b3b9385aeb19820034p@chr7:47835322..47835327, -
3.1e-50FFCP PHASE2:Hg19::chr9:118413835..118413843,-#_e09a1af5290384b3b9385aeb19820034p@chr9:118413835..118413843, -
3.1e-50FFCP PHASE1:Hg19::chr13:84979566..84979573,-#_e09a1af5290384b3b9385aeb19820034p@chr13:84979566..84979573, -
3.1e-50FFCP PHASE2:Hg19::chr2:55327810..55327812,-#_e09a1af5290384b3b9385aeb19820034p@chr2:55327810..55327812, -
3.1e-50FFCP PHASE2:Hg19::chr1:199267284..199267291,+#_e09a1af5290384b3b9385aeb19820034p@chr1:199267284..199267291, +
3.1e-50FFCP PHASE2:Hg19::chr2:151537893..151537898,-#_e09a1af5290384b3b9385aeb19820034p@chr2:151537893..151537898, -
3.1e-50FFCP PHASE1:Hg19::chr12:76108116..76108123,-#_e09a1af5290384b3b9385aeb19820034p@chr12:76108116..76108123, -
3.1e-50FFCP PHASE2:Hg19::chr3:98699947..98699957,-#_e09a1af5290384b3b9385aeb19820034p@chr3:98699947..98699957, -
3.1e-50FFCP PHASE2:Hg19::chr12:76108116..76108123,-#_e09a1af5290384b3b9385aeb19820034p@chr12:76108116..76108123, -
3.1e-50FFCP PHASE2:Hg19::chr13:84979566..84979573,-#_e09a1af5290384b3b9385aeb19820034p@chr13:84979566..84979573, -
3.1e-50FFCP PHASE1:Hg19::chr7:32133423..32133424,+#_e09a1af5290384b3b9385aeb19820034p@chr7:32133423..32133424, +
3.1e-50FFCP PHASE1:Hg19::chr17:62679110..62679113,+#_e09a1af5290384b3b9385aeb19820034p@chr17:62679110..62679113, +
3.1e-50FFCP PHASE2:Hg19::chr1:219498496..219498503,-#_e09a1af5290384b3b9385aeb19820034p@chr1:219498496..219498503, -
3.1e-50FFCP PHASE1:Hg19::chr7:84807360..84807364,+#_e09a1af5290384b3b9385aeb19820034p@chr7:84807360..84807364, +
3.1e-50FFCP PHASE2:Hg19::chr11:36796505..36796529,+#_e09a1af5290384b3b9385aeb19820034p@chr11:36796505..36796529, +
3.1e-50FFCP PHASE1:Hg19::chr11:36796505..36796529,+#_e09a1af5290384b3b9385aeb19820034p@chr11:36796505..36796529, +
3.1e-50FFCP PHASE2:Hg19::chr2:216588131..216588134,+#_e09a1af5290384b3b9385aeb19820034p@chr2:216588131..216588134, +
3.1e-50FFCP PHASE2:Hg19::chr14:68614207..68614210,-#_e09a1af5290384b3b9385aeb19820034p@chr14:68614207..68614210, -
3.1e-50FFCP PHASE1:Hg19::chr1:226851965..226851967,+#_e09a1af5290384b3b9385aeb19820034p@chr1:226851965..226851967, +
3.1e-50FFCP PHASE1:Hg19::chr6:140070083..140070090,+#_e09a1af5290384b3b9385aeb19820034p@chr6:140070083..140070090, +
3.1e-50FFCP PHASE2:Hg19::chr6:140070083..140070090,+#_e09a1af5290384b3b9385aeb19820034p@chr6:140070083..140070090, +
3.1e-50FFCP PHASE1:Hg19::chr11:10349108..10349113,+#_e09a1af5290384b3b9385aeb19820034p@chr11:10349108..10349113, +
3.1e-50FFCP PHASE2:Hg19::chr11:10349108..10349113,+#_e09a1af5290384b3b9385aeb19820034p@chr11:10349108..10349113, +
3.1e-50FFCP PHASE1:Hg19::chr4:77703570..77703577,+#_e09a1af5290384b3b9385aeb19820034p@chr4:77703570..77703577, +
3.1e-50FFCP PHASE1:Hg19::chr12:76175230..76175237,-#_e09a1af5290384b3b9385aeb19820034p@chr12:76175230..76175237, -
3.1e-50FFCP PHASE2:Hg19::chr12:76175230..76175237,-#_e09a1af5290384b3b9385aeb19820034p@chr12:76175230..76175237, -
3.1e-50FFCP PHASE2:Hg19::chr7:32133423..32133424,+#_e09a1af5290384b3b9385aeb19820034p@chr7:32133423..32133424, +
3.1e-50FFCP PHASE2:Hg19::chr17:62679110..62679113,+#_e09a1af5290384b3b9385aeb19820034p@chr17:62679110..62679113, +
3.1e-50FFCP PHASE2:Hg19::chr7:84807360..84807364,+#_e09a1af5290384b3b9385aeb19820034p@chr7:84807360..84807364, +
3.1e-50FFCP PHASE2:Hg19::chr4:77703570..77703577,+#_e09a1af5290384b3b9385aeb19820034p@chr4:77703570..77703577, +
3.1e-50FFCP PHASE1:Hg19::chr14:23158454..23158473,-#_e09a1af5290384b3b9385aeb19820034p@chr14:23158454..23158473, -
5.14e-50FFCP PHASE1:Hg19::chr2:72789203..72789224,-#_2533cc4b4a423d0bc35471f727186ee8p@chr2:72789203..72789224, -
5.14e-50FFCP PHASE2:Hg19::chr2:72789203..72789224,-#_2533cc4b4a423d0bc35471f727186ee8p@chr2:72789203..72789224, -
5.14e-50FFCP PHASE1:Hg19::chr6:136397717..136397720,-#_2533cc4b4a423d0bc35471f727186ee8p@chr6:136397717..136397720, -
5.14e-50FFCP PHASE2:Hg19::chr6:136397717..136397720,-#_2533cc4b4a423d0bc35471f727186ee8p@chr6:136397717..136397720, -
2.53e-41FFCP PHASE1:Hg19::chr9:13707925..13707941,+#_4b2188c108294c7e5b2a62e40bc9c5a4p@chr9:13707925..13707941, +
2.53e-41FFCP PHASE2:Hg19::chr9:13707925..13707941,+#_4b2188c108294c7e5b2a62e40bc9c5a4p@chr9:13707925..13707941, +
1.48e-40FFCP PHASE1:Hg19::chr3:170459091..170459101,-#_27430486e5d566fc753a7fda631dcc0dp4@ENST00000473110
1.48e-40FFCP PHASE2:Hg19::chr3:170459091..170459101,-#_27430486e5d566fc753a7fda631dcc0dp4@ENST00000473110
1.81e-40FFCP PHASE1:Hg19::chr11:28779555..28779601,+#_0032199636c2e797e848632a9c333979p@chr11:28779555..28779601, +
1.81e-40FFCP PHASE2:Hg19::chr11:28779555..28779601,+#_0032199636c2e797e848632a9c333979p@chr11:28779555..28779601, +
2.22e-40FFCP PHASE1:Hg19::chr8:11373722..11373763,+#_de77546caaf86c96072c4166adc95912p@chr8:11373722..11373763, +
2.22e-40FFCP PHASE1:Hg19::chr1:238811500..238811513,+#_de77546caaf86c96072c4166adc95912p@chr1:238811500..238811513, +
2.22e-40FFCP PHASE2:Hg19::chr8:11373722..11373763,+#_de77546caaf86c96072c4166adc95912p@chr8:11373722..11373763, +
2.22e-40FFCP PHASE2:Hg19::chr1:238811500..238811513,+#_de77546caaf86c96072c4166adc95912p@chr1:238811500..238811513, +
2.22e-40FFCP PHASE1:Hg19::chr8:120063756..120063761,-#_de77546caaf86c96072c4166adc95912p@chr8:120063756..120063761, -
2.22e-40FFCP PHASE2:Hg19::chr8:120063756..120063761,-#_de77546caaf86c96072c4166adc95912p@chr8:120063756..120063761, -

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