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{{UBERON
{{UBERON
|id=UBERON:0005913
|alt_id=
|name=zone of bone organ
|namespace=
|def=
|xref=FMA:10483
|is_a=UBERON:0000064;;UBERON:0004765
|synonym="bone organ zone" EXACT [FMA:10483]
|comment=
|comment=
|alt_id=
|disjoint_from=
|union_of=
|created_by=
|created_by=
|obo_creation_date=
|def=
|subset=
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|disjoint_from=
|has_quality=
|has_quality=
|id=UBERON:0005913
|is_a=UBERON:0000064
|is_obsolete=
|located_in=
|located_in=
|name=zone of bone organ
|namespace=FANTOM
|obo_creation_date=
|part_of=UBERON:0001474
|part_of=UBERON:0001474
|preceded_by=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|subset=
|synonym="bone organ zone" EXACT [FMA:10483]
|union_of=
|xref=FMA:10483
}}
}}

Latest revision as of 17:55, 12 September 2014

Name:zone of bone organ
Namespace:FANTOM
Xrefs:
links:
FMA:10483
Synonyms: "bone organ zone" EXACT [FMA:10483]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data

Parents

is_a:UBERON:0000064(organ part)
part_of:UBERON:0001474(bone element)



Children

is a:UBERON:0001694 (petrous part of temporal bone)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology

Mouse (Mus musculus)

  • 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
  • 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
  • 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
  • 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
  • 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
  • 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0005913 (zone of bone organ), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data

P-valueFFCPShort description
1.87e-86FFCP PHASE2:Mm9::chr19:21028739..21028785,-#_7b6f029a0160898c16bcaba809565328p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr14:47293496..47293510,-#_7b6f029a0160898c16bcaba809565328p@chr14:47293496..47293510, -
1.87e-86FFCP PHASE2:Mm9::chr2:9811162..9811171,-#_7b6f029a0160898c16bcaba809565328p2@9230102O04Rik
1.87e-86FFCP PHASE2:Mm9::chr14:102297728..102297742,+#_7b6f029a0160898c16bcaba809565328p@chr14:102297728..102297742, +
1.87e-86FFCP PHASE1:Mm9::chr9:50968647..50968668,-#_7b6f029a0160898c16bcaba809565328p@chr9:50968647..50968668, -
1.87e-86FFCP PHASE2:Mm9::chr11:8405038..8405048,-#_7b6f029a0160898c16bcaba809565328p@chr11:8405038..8405048, -
1.87e-86FFCP PHASE2:Mm9::chr7:109265277..109265288,-#_7b6f029a0160898c16bcaba809565328p4@Chrna10
1.87e-86FFCP PHASE1:Mm9::chr14:20649897..20649907,+#_7b6f029a0160898c16bcaba809565328p@chr14:20649897..20649907, +
1.87e-86FFCP PHASE1:Mm9::chr10:81091447..81091464,+#_7b6f029a0160898c16bcaba809565328p9@Ankrd24
1.87e-86FFCP PHASE1:Mm9::chr18:81327205..81327211,+#_7b6f029a0160898c16bcaba809565328p@chr18:81327205..81327211, +
1.87e-86FFCP PHASE2:Mm9::chr17:31335953..31335957,-#_7b6f029a0160898c16bcaba809565328p3@Tmprss3
1.87e-86FFCP PHASE2:Mm9::chr9:42207792..42207805,-#_7b6f029a0160898c16bcaba809565328p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr8:13414266..13414279,+#_7b6f029a0160898c16bcaba809565328p@chr8:13414266..13414279, +
1.87e-86FFCP PHASE1:Mm9::chr13:78257454..78257465,+#_7b6f029a0160898c16bcaba809565328p@chr13:78257454..78257465, +
1.87e-86FFCP PHASE2:Mm9::chr15:89215306..89215315,+#_7b6f029a0160898c16bcaba809565328p@chr15:89215306..89215315, +
1.87e-86FFCP PHASE2:Mm9::chr7:109052262..109052291,-#_7b6f029a0160898c16bcaba809565328p1@Tomt
1.87e-86FFCP PHASE2:Mm9::chr5:30710403..30710406,-#_7b6f029a0160898c16bcaba809565328p10@Otof
1.87e-86FFCP PHASE1:Mm9::chr4:115556989..115556997,+#_7b6f029a0160898c16bcaba809565328p1@Kncn
1.87e-86FFCP PHASE1:Mm9::chr18:59222033..59222043,+#_7b6f029a0160898c16bcaba809565328p7@A730017C20Rik
1.87e-86FFCP PHASE2:Mm9::chr8:13414289..13414295,+#_7b6f029a0160898c16bcaba809565328p@chr8:13414289..13414295, +
1.87e-86FFCP PHASE2:Mm9::chr9:66860888..66860899,+#_7b6f029a0160898c16bcaba809565328p@chr9:66860888..66860899, +
1.87e-86FFCP PHASE2:Mm9::chr2:53464178..53464186,+#_7b6f029a0160898c16bcaba809565328p@chr2:53464178..53464186, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207792..42207805,-#_7b6f029a0160898c16bcaba809565328p11@Tecta
1.87e-86FFCP PHASE1:Mm9::chr2:73232344..73232356,-#_7b6f029a0160898c16bcaba809565328p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE1:Mm9::chr1:93218682..93218691,+#_7b6f029a0160898c16bcaba809565328p2@Espnl
1.87e-86FFCP PHASE1:Mm9::chr7:88068153..88068160,-#_7b6f029a0160898c16bcaba809565328p10@Sec11a
1.87e-86FFCP PHASE1:Mm9::chr10:107156949..107156956,-#_7b6f029a0160898c16bcaba809565328p3@Ptprq
1.87e-86FFCP PHASE2:Mm9::chr12:109905399..109905416,+#_7b6f029a0160898c16bcaba809565328p@chr12:109905399..109905416, +
1.87e-86FFCP PHASE1:Mm9::chr3:31585340..31585360,+#_7b6f029a0160898c16bcaba809565328p@chr3:31585340..31585360, +
1.87e-86FFCP PHASE2:Mm9::chr4:101908153..101908163,+#_7b6f029a0160898c16bcaba809565328p@chr4:101908153..101908163, +
1.87e-86FFCP PHASE2:Mm9::chr16:93971357..93971363,-#_7b6f029a0160898c16bcaba809565328p@chr16:93971357..93971363, -
1.87e-86FFCP PHASE1:Mm9::chr8:94180607..94180619,-#_7b6f029a0160898c16bcaba809565328p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr2:170417150..170417155,-#_7b6f029a0160898c16bcaba809565328p@chr2:170417150..170417155, -
1.87e-86FFCP PHASE2:Mm9::chr10:97109753..97109764,+#_7b6f029a0160898c16bcaba809565328p3@Epyc
1.87e-86FFCP PHASE2:Mm9::chr2:121206677..121206683,-#_7b6f029a0160898c16bcaba809565328p3@Strc
1.87e-86FFCP PHASE1:Mm9::chr6:30619378..30619412,-#_7b6f029a0160898c16bcaba809565328p11@Tsga14
1.87e-86FFCP PHASE2:Mm9::chr6:113251570..113251578,+#_7b6f029a0160898c16bcaba809565328p@chr6:113251570..113251578, +
1.87e-86FFCP PHASE1:Mm9::chr15:65641741..65641748,+#_7b6f029a0160898c16bcaba809565328p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr13:76964459..76964469,+#_7b6f029a0160898c16bcaba809565328p15@Mctp1
1.87e-86FFCP PHASE1:Mm9::chr2:14685072..14685084,+#_7b6f029a0160898c16bcaba809565328p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr5:21371424..21371435,-#_7b6f029a0160898c16bcaba809565328p2@Slc26a5
1.87e-86FFCP PHASE2:Mm9::chr2:73232344..73232356,-#_7b6f029a0160898c16bcaba809565328p@chr2:73232344..73232356, -
1.87e-86FFCP PHASE2:Mm9::chr1:172843885..172843890,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843885..172843890, -
1.87e-86FFCP PHASE1:Mm9::chr7:139597684..139597691,+#_7b6f029a0160898c16bcaba809565328p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE1:Mm9::chr19:21028739..21028785,-#_7b6f029a0160898c16bcaba809565328p1@Tmc1
1.87e-86FFCP PHASE1:Mm9::chr17:13983179..13983190,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983179..13983190, +
1.87e-86FFCP PHASE1:Mm9::chr13:43699188..43699216,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr3:154459184..154459195,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459184..154459195, +
1.87e-86FFCP PHASE2:Mm9::chr2:67011941..67011951,+#_7b6f029a0160898c16bcaba809565328p3@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr9:42207983..42207995,-#_7b6f029a0160898c16bcaba809565328p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr5:144115382..144115389,+#_7b6f029a0160898c16bcaba809565328p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr10:80806020..80806031,-#_7b6f029a0160898c16bcaba809565328p3@Gipc3
1.87e-86FFCP PHASE2:Mm9::chr10:107349378..107349390,-#_7b6f029a0160898c16bcaba809565328p1@Otogl
1.87e-86FFCP PHASE1:Mm9::chr5:72652660..72652667,+#_7b6f029a0160898c16bcaba809565328p@chr5:72652660..72652667, +
1.87e-86FFCP PHASE1:Mm9::chr16:93971367..93971379,-#_7b6f029a0160898c16bcaba809565328p@chr16:93971367..93971379, -
1.87e-86FFCP PHASE2:Mm9::chr17:13983198..13983203,+#_7b6f029a0160898c16bcaba809565328p@chr17:13983198..13983203, +
1.87e-86FFCP PHASE1:Mm9::chr9:42207983..42207995,-#_7b6f029a0160898c16bcaba809565328p3@Tecta
1.87e-86FFCP PHASE1:Mm9::chr7:53496326..53496340,+#_7b6f029a0160898c16bcaba809565328p1@Otog
1.87e-86FFCP PHASE2:Mm9::chr13:43699188..43699216,+#_7b6f029a0160898c16bcaba809565328p@chr13:43699188..43699216, +
1.87e-86FFCP PHASE2:Mm9::chr9:42207375..42207384,-#_7b6f029a0160898c16bcaba809565328p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE2:Mm9::chr19:55256373..55256384,+#_7b6f029a0160898c16bcaba809565328p@chr19:55256373..55256384, +
1.87e-86FFCP PHASE1:Mm9::chr2:121206667..121206674,-#_7b6f029a0160898c16bcaba809565328p2@Strc
1.87e-86FFCP PHASE1:Mm9::chr10:107349392..107349413,-#_7b6f029a0160898c16bcaba809565328p2@Otogl
1.87e-86FFCP PHASE2:Mm9::chr1:60561636..60561645,-#_7b6f029a0160898c16bcaba809565328p@chr1:60561636..60561645, -
1.87e-86FFCP PHASE1:Mm9::chr15:89215333..89215341,+#_7b6f029a0160898c16bcaba809565328p@chr15:89215333..89215341, +
1.87e-86FFCP PHASE2:Mm9::chr7:133957514..133957529,+#_7b6f029a0160898c16bcaba809565328p@chr7:133957514..133957529, +
1.87e-86FFCP PHASE1:Mm9::chr1:172843813..172843834,-#_7b6f029a0160898c16bcaba809565328p@chr1:172843813..172843834, -
1.87e-86FFCP PHASE2:Mm9::chr5:144115382..144115389,+#_7b6f029a0160898c16bcaba809565328p@chr5:144115382..144115389, +
1.87e-86FFCP PHASE1:Mm9::chr5:30710455..30710464,-#_7b6f029a0160898c16bcaba809565328p9@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:58283583..58283607,-#_7b6f029a0160898c16bcaba809565328p@chr13:58283583..58283607, -
1.87e-86FFCP PHASE1:Mm9::chr9:42207375..42207384,-#_7b6f029a0160898c16bcaba809565328p@chr9:42207375..42207384, -
1.87e-86FFCP PHASE1:Mm9::chr2:67011956..67011967,+#_7b6f029a0160898c16bcaba809565328p1@Gm1322
1.87e-86FFCP PHASE2:Mm9::chr1:93235253..93235264,+#_7b6f029a0160898c16bcaba809565328p@chr1:93235253..93235264, +
1.87e-86FFCP PHASE1:Mm9::chr11:102123554..102123566,+#_7b6f029a0160898c16bcaba809565328p4@BC030867
1.87e-86FFCP PHASE2:Mm9::chr11:4689837..4689845,-#_7b6f029a0160898c16bcaba809565328p@chr11:4689837..4689845, -
1.87e-86FFCP PHASE2:Mm9::chr8:94180607..94180619,-#_7b6f029a0160898c16bcaba809565328p@chr8:94180607..94180619, -
1.87e-86FFCP PHASE1:Mm9::chr17:31335953..31335957,-#_7b6f029a0160898c16bcaba809565328p3@Tmprss3
1.87e-86FFCP PHASE1:Mm9::chr3:154459231..154459240,+#_7b6f029a0160898c16bcaba809565328p@chr3:154459231..154459240, +
1.87e-86FFCP PHASE2:Mm9::chr13:78322370..78322376,-#_7b6f029a0160898c16bcaba809565328p4@uc007rhb.1
1.87e-86FFCP PHASE1:Mm9::chr11:75421384..75421397,+#_7b6f029a0160898c16bcaba809565328p@chr11:75421384..75421397, +
1.87e-86FFCP PHASE2:Mm9::chr1:182528371..182528385,+#_7b6f029a0160898c16bcaba809565328p@chr1:182528371..182528385, +
1.87e-86FFCP PHASE2:Mm9::chr7:141605556..141605563,-#_7b6f029a0160898c16bcaba809565328p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:154246932..154246939,+#_7b6f029a0160898c16bcaba809565328p7@Glt25d2
1.87e-86FFCP PHASE1:Mm9::chr14:102297747..102297765,+#_7b6f029a0160898c16bcaba809565328p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE2:Mm9::chr17:27252925..27252939,+#_7b6f029a0160898c16bcaba809565328p@chr17:27252925..27252939, +
1.87e-86FFCP PHASE1:Mm9::chr7:141605556..141605563,-#_7b6f029a0160898c16bcaba809565328p@chr7:141605556..141605563, -
1.87e-86FFCP PHASE1:Mm9::chr1:194818647..194818660,-#_7b6f029a0160898c16bcaba809565328p@chr1:194818647..194818660, -
1.87e-86FFCP PHASE2:Mm9::chr12:13572961..13572974,+#_7b6f029a0160898c16bcaba809565328p@chr12:13572961..13572974, +
1.87e-86FFCP PHASE1:Mm9::chr19:22767090..22767099,+#_7b6f029a0160898c16bcaba809565328p18@Trpm3
1.87e-86FFCP PHASE1:Mm9::chr13:48087761..48087775,-#_7b6f029a0160898c16bcaba809565328p@chr13:48087761..48087775, -
1.87e-86FFCP PHASE2:Mm9::chr14:102297747..102297765,+#_7b6f029a0160898c16bcaba809565328p@chr14:102297747..102297765, +
1.87e-86FFCP PHASE1:Mm9::chr11:4689776..4689785,-#_7b6f029a0160898c16bcaba809565328p@chr11:4689776..4689785, -
1.87e-86FFCP PHASE2:Mm9::chr15:65641741..65641748,+#_7b6f029a0160898c16bcaba809565328p@chr15:65641741..65641748, +
1.87e-86FFCP PHASE2:Mm9::chr7:139597684..139597691,+#_7b6f029a0160898c16bcaba809565328p@chr7:139597684..139597691, +
1.87e-86FFCP PHASE2:Mm9::chr2:14685072..14685084,+#_7b6f029a0160898c16bcaba809565328p41@Cacnb2
1.87e-86FFCP PHASE1:Mm9::chr2:136942131..136942142,-#_7b6f029a0160898c16bcaba809565328p6@Jag1
1.87e-86FFCP PHASE1:Mm9::chr18:38104702..38104718,-#_7b6f029a0160898c16bcaba809565328p@chr18:38104702..38104718, -
1.87e-86FFCP PHASE2:Mm9::chr5:30710416..30710440,-#_7b6f029a0160898c16bcaba809565328p2@Otof
1.87e-86FFCP PHASE2:Mm9::chr13:37195838..37195870,-#_7b6f029a0160898c16bcaba809565328p@chr13:37195838..37195870, -
1.87e-86FFCP PHASE2:Mm9::chr15:103146966..103146971,-#_7b6f029a0160898c16bcaba809565328p@chr15:103146966..103146971, -

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