Personal tools

UBERON:0006311: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
Line 13: Line 13:
|located_in=
|located_in=
|name=chamber of eyeball
|name=chamber of eyeball
|namespace=
|namespace=FANTOM
|obo_creation_date=
|obo_creation_date=
|part_of=UBERON:0000019
|part_of=UBERON:0000019

Latest revision as of 17:57, 12 September 2014

Name:chamber of eyeball
Namespace:FANTOM
Definition:"Chamber of eyeball[FMA]" [FMA:58071]
Xrefs:
links:

BTO:0002085
FMA:58071
MA:0002459
ncithesaurus:Chamber_of_the_Eye

SCTID:280540004
Synonyms: "eye chamber" EXACT [MA:0002459]
"eyeball chamber" EXACT [FMA:58071]

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0000064(organ part),UBERON:0004121(ectoderm-derived structure)
part_of:UBERON:0000019(camera-type eye)



Children

is a:UBERON:0001799 (vitreous chamber of eyeball)

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006311 (chamber of eyeball), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


No analysis results