Personal tools

UBERON:0006834: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
Line 14: Line 14:
|obo_creation_date=
|obo_creation_date=
|subset=grouping_class
|subset=grouping_class
|adjacent_to=
|derives_from=
|derives_from=
|develops_from=
|develops_from=
|has_quality=
|has_quality=
|located_in=
|located_in=
|part_of=UBERON:0000474
|part_of=
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|property_value=IAO:0000412 http://purl.obolibrary.org/obo/uberon.owl
|is_obsolete=
|is_obsolete=
|preceded_by=
|preceded_by=
}}
}}

Revision as of 17:07, 26 June 2012

Name:uterus or analog
Definition:"An internal female reproductive organ that is the site of embryo development." []
Xrefs:
links:

FBbt:00004924
TADS:0000421

WBbt:0006760
Synonyms: "uterus" BROAD SENSU [FBbt:00004924]
Subset: grouping_class

Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data


Parents

is_a:UBERON:0003975(internal female genitalia)



Children NA

Ontology Tree: Loaded from BioPortal

Ontorolgy tree(Small window open)

FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology


Human (Homo sapiens)

Mouse (Mus musculus)


Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0006834 (uterus or analog), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data


P-valueFFCPShort description
5.42e-195FFCP PHASE2:Hg19::chr12:11586047..11586051,-#_e28de6580583faf5aabba6c11d5e2396p@chr12:11586047..11586051, -
5.42e-195FFCP PHASE2:Hg19::chr2:177627285..177627294,-#_e28de6580583faf5aabba6c11d5e2396p1@ENST00000430460
5.42e-195FFCP PHASE1:Hg19::chr19:6076501..6076505,-#_e28de6580583faf5aabba6c11d5e2396p@chr19:6076501..6076505, -
5.42e-195FFCP PHASE2:Hg19::chr19:6076501..6076505,-#_e28de6580583faf5aabba6c11d5e2396p@chr19:6076501..6076505, -
5.42e-195FFCP PHASE1:Hg19::chr12:11586047..11586051,-#_e28de6580583faf5aabba6c11d5e2396p@chr12:11586047..11586051, -
5.42e-195FFCP PHASE1:Hg19::chrX:9165234..9165241,-#_e28de6580583faf5aabba6c11d5e2396p@chrX:9165234..9165241, -
5.42e-195FFCP PHASE2:Hg19::chrX:9165234..9165241,-#_e28de6580583faf5aabba6c11d5e2396p@chrX:9165234..9165241, -
5.42e-195FFCP PHASE1:Hg19::chr1:192761703..192761710,-#_e28de6580583faf5aabba6c11d5e2396p@chr1:192761703..192761710, -
5.42e-195FFCP PHASE2:Hg19::chr1:192761703..192761710,-#_e28de6580583faf5aabba6c11d5e2396p@chr1:192761703..192761710, -
5.42e-195FFCP PHASE2:Hg19::chr7:140082186..140082188,-#_e28de6580583faf5aabba6c11d5e2396p@chr7:140082186..140082188, -
5.42e-195FFCP PHASE1:Hg19::chr7:140082186..140082188,-#_e28de6580583faf5aabba6c11d5e2396p@chr7:140082186..140082188, -
5.42e-195FFCP PHASE1:Hg19::chr2:177627285..177627294,-#_e28de6580583faf5aabba6c11d5e2396p1@ENST00000430460
9.37e-99FFCP PHASE2:Hg19::chr11:100999679..100999686,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p11@PGR
9.37e-99FFCP PHASE1:Hg19::chrX:9165216..9165223,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chrX:9165216..9165223, -
9.37e-99FFCP PHASE2:Hg19::chr11:100935059..100935062,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p9@PGR
9.37e-99FFCP PHASE2:Hg19::chrX:9165216..9165223,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chrX:9165216..9165223, -
9.37e-99FFCP PHASE2:Hg19::chr14:52066650..52066658,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p6@ENST00000556617
9.37e-99FFCP PHASE1:Hg19::chr11:100999679..100999686,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p11@PGR
9.37e-99FFCP PHASE1:Hg19::chr11:100935059..100935062,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p9@PGR
9.37e-99FFCP PHASE2:Hg19::chr11:100978593..100978596,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chr11:100978593..100978596, -
9.37e-99FFCP PHASE1:Hg19::chr14:52066650..52066658,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p6@ENST00000556617
9.37e-99FFCP PHASE2:Hg19::chr1:226129114..226129123,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p3@LEFTY2
9.37e-99FFCP PHASE1:Hg19::chr11:100978593..100978596,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chr11:100978593..100978596, -
9.37e-99FFCP PHASE1:Hg19::chr1:226129114..226129123,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p3@LEFTY2
9.37e-99FFCP PHASE1:Hg19::chr7:38042894..38042903,+#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chr7:38042894..38042903, +
9.37e-99FFCP PHASE2:Hg19::chr7:38042894..38042903,+#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chr7:38042894..38042903, +
9.37e-99FFCP PHASE1:Hg19::chr6:111839306..111839347,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chr6:111839306..111839347, -
9.37e-99FFCP PHASE2:Hg19::chr6:111839306..111839347,-#_c19d11747a1f6eaf93b2bd8d0465fbd2p@chr6:111839306..111839347, -
9.37e-99FFCP PHASE1:Hg19::chr6:152126688..152126695,+#_c19d11747a1f6eaf93b2bd8d0465fbd2p22@ESR1
9.37e-99FFCP PHASE2:Hg19::chr6:152126688..152126695,+#_c19d11747a1f6eaf93b2bd8d0465fbd2p22@ESR1
2.55e-98FFCP PHASE2:Hg19::chr11:32457367..32457372,+#_6599237cbd8ba24931037528afe07f9cp10@WT1-AS
2.55e-98FFCP PHASE1:Hg19::chr10:111171762..111171773,-#_6599237cbd8ba24931037528afe07f9cp@chr10:111171762..111171773, -
2.55e-98FFCP PHASE1:Hg19::chr6:56362524..56362534,-#_6599237cbd8ba24931037528afe07f9cp114@DST
2.55e-98FFCP PHASE2:Hg19::chr6:56362524..56362534,-#_6599237cbd8ba24931037528afe07f9cp114@DST
2.55e-98FFCP PHASE1:Hg19::chr11:32457367..32457372,+#_6599237cbd8ba24931037528afe07f9cp10@WT1-AS
2.55e-98FFCP PHASE2:Hg19::chr18:69246146..69246156,-#_6599237cbd8ba24931037528afe07f9cp3@LOC100505776
2.55e-98FFCP PHASE1:Hg19::chr3:151879786..151879796,-#_6599237cbd8ba24931037528afe07f9cp@chr3:151879786..151879796, -
2.55e-98FFCP PHASE2:Hg19::chr3:151879786..151879796,-#_6599237cbd8ba24931037528afe07f9cp@chr3:151879786..151879796, -
2.55e-98FFCP PHASE1:Hg19::chr18:69246146..69246156,-#_6599237cbd8ba24931037528afe07f9cp3@LOC100505776
2.55e-98FFCP PHASE2:Hg19::chr10:97200772..97200774,-#_6599237cbd8ba24931037528afe07f9cp@chr10:97200772..97200774, -
2.55e-98FFCP PHASE2:Hg19::chr3:69795884..69795894,+#_6599237cbd8ba24931037528afe07f9cp@chr3:69795884..69795894, +
2.55e-98FFCP PHASE2:Hg19::chr18:69246167..69246179,-#_6599237cbd8ba24931037528afe07f9cp2@LOC100505776
2.55e-98FFCP PHASE1:Hg19::chr3:151879803..151879810,-#_6599237cbd8ba24931037528afe07f9cp@chr3:151879803..151879810, -
2.55e-98FFCP PHASE2:Hg19::chr3:151879803..151879810,-#_6599237cbd8ba24931037528afe07f9cp@chr3:151879803..151879810, -
2.55e-98FFCP PHASE1:Hg19::chr3:69795884..69795894,+#_6599237cbd8ba24931037528afe07f9cp@chr3:69795884..69795894, +
2.55e-98FFCP PHASE1:Hg19::chr18:69246167..69246179,-#_6599237cbd8ba24931037528afe07f9cp2@LOC100505776
2.55e-98FFCP PHASE2:Hg19::chr9:2732098..2732101,-#_6599237cbd8ba24931037528afe07f9cp@chr9:2732098..2732101, -
2.55e-98FFCP PHASE1:Hg19::chr9:2732098..2732101,-#_6599237cbd8ba24931037528afe07f9cp@chr9:2732098..2732101, -
2.55e-98FFCP PHASE1:Hg19::chr10:97200772..97200774,-#_6599237cbd8ba24931037528afe07f9cp@chr10:97200772..97200774, -
2.55e-98FFCP PHASE2:Hg19::chr11:128457478..128457485,-#_6599237cbd8ba24931037528afe07f9cp26@ETS1
2.55e-98FFCP PHASE2:Hg19::chr10:111171762..111171773,-#_6599237cbd8ba24931037528afe07f9cp@chr10:111171762..111171773, -
2.55e-98FFCP PHASE1:Hg19::chr11:128457478..128457485,-#_6599237cbd8ba24931037528afe07f9cp26@ETS1
3.07e-86FFCP PHASE2:Mm9::chr3:107171294..107171301,+#_0a71516092c7a5b5cfe30a589618768bp@chr3:107171294..107171301, +
3.07e-86FFCP PHASE2:Mm9::chr19:55338956..55338996,+#_0a71516092c7a5b5cfe30a589618768bp@chr19:55338956..55338996, +
3.07e-86FFCP PHASE1:Mm9::chr3:121318996..121319004,-#_0a71516092c7a5b5cfe30a589618768bp@chr3:121318996..121319004, -
3.07e-86FFCP PHASE1:Mm9::chr14:35235937..35235940,-#_0a71516092c7a5b5cfe30a589618768bp@chr14:35235937..35235940, -
3.07e-86FFCP PHASE2:Mm9::chr4:114143506..114143510,-#_0a71516092c7a5b5cfe30a589618768bp@chr4:114143506..114143510, -
3.07e-86FFCP PHASE2:Mm9::chr1:52197272..52197276,-#_0a71516092c7a5b5cfe30a589618768bp@chr1:52197272..52197276, -
3.07e-86FFCP PHASE2:Mm9::chr3:121318996..121319004,-#_0a71516092c7a5b5cfe30a589618768bp@chr3:121318996..121319004, -
3.07e-86FFCP PHASE2:Mm9::chr3:131154017..131154021,-#_0a71516092c7a5b5cfe30a589618768bp@chr3:131154017..131154021, -
3.07e-86FFCP PHASE1:Mm9::chr5:143564663..143564666,-#_0a71516092c7a5b5cfe30a589618768bp@chr5:143564663..143564666, -
3.07e-86FFCP PHASE1:Mm9::chr2:75420503..75420506,+#_0a71516092c7a5b5cfe30a589618768bp@chr2:75420503..75420506, +
3.07e-86FFCP PHASE1:Mm9::chr1:52197272..52197276,-#_0a71516092c7a5b5cfe30a589618768bp@chr1:52197272..52197276, -
3.07e-86FFCP PHASE2:Mm9::chr7:17319014..17319028,+#_0a71516092c7a5b5cfe30a589618768bp@chr7:17319014..17319028, +
3.07e-86FFCP PHASE2:Mm9::chr16:92291354..92291359,+#_0a71516092c7a5b5cfe30a589618768bp@chr16:92291354..92291359, +
3.07e-86FFCP PHASE1:Mm9::chr13:27404521..27404525,+#_0a71516092c7a5b5cfe30a589618768bp2@Prl6a1
3.07e-86FFCP PHASE2:Mm9::chr5:92691807..92691814,-#_0a71516092c7a5b5cfe30a589618768bp12@Naaa
3.07e-86FFCP PHASE1:Mm9::chr7:137388074..137388119,-#_0a71516092c7a5b5cfe30a589618768bp@chr7:137388074..137388119, -
3.07e-86FFCP PHASE2:Mm9::chr3:107171302..107171307,+#_0a71516092c7a5b5cfe30a589618768bp@chr3:107171302..107171307, +
3.07e-86FFCP PHASE2:Mm9::chr12:104620760..104620761,-#_0a71516092c7a5b5cfe30a589618768bp@chr12:104620760..104620761, -
3.07e-86FFCP PHASE2:Mm9::chr7:137388074..137388119,-#_0a71516092c7a5b5cfe30a589618768bp@chr7:137388074..137388119, -
3.07e-86FFCP PHASE2:Mm9::chr10:111668149..111668158,-#_0a71516092c7a5b5cfe30a589618768bp@chr10:111668149..111668158, -
3.07e-86FFCP PHASE1:Mm9::chr9:85243991..85243994,-#_0a71516092c7a5b5cfe30a589618768bp@chr9:85243991..85243994, -
3.07e-86FFCP PHASE2:Mm9::chr9:116079513..116079518,-#_0a71516092c7a5b5cfe30a589618768bp@chr9:116079513..116079518, -
3.07e-86FFCP PHASE2:Mm9::chr1:188533348..188533350,+#_0a71516092c7a5b5cfe30a589618768bp@chr1:188533348..188533350, +
3.07e-86FFCP PHASE1:Mm9::chr9:116079513..116079518,-#_0a71516092c7a5b5cfe30a589618768bp@chr9:116079513..116079518, -
3.07e-86FFCP PHASE1:Mm9::chr8:73107433..73107436,+#_0a71516092c7a5b5cfe30a589618768bp@chr8:73107433..73107436, +
3.07e-86FFCP PHASE1:Mm9::chr19:55338956..55338996,+#_0a71516092c7a5b5cfe30a589618768bp@chr19:55338956..55338996, +
3.07e-86FFCP PHASE1:Mm9::chr10:111668149..111668158,-#_0a71516092c7a5b5cfe30a589618768bp@chr10:111668149..111668158, -
3.07e-86FFCP PHASE2:Mm9::chr12:80170796..80170800,+#_0a71516092c7a5b5cfe30a589618768bp@chr12:80170796..80170800, +
3.07e-86FFCP PHASE1:Mm9::chr11:46565908..46565916,+#_0a71516092c7a5b5cfe30a589618768bp@chr11:46565908..46565916, +
3.07e-86FFCP PHASE2:Mm9::chr8:126016607..126016612,+#_0a71516092c7a5b5cfe30a589618768bp10@Afg3l1
3.07e-86FFCP PHASE2:Mm9::chr12:92642462..92642493,+#_0a71516092c7a5b5cfe30a589618768bp@chr12:92642462..92642493, +
3.07e-86FFCP PHASE2:Mm9::chr7:126744627..126744632,-#_0a71516092c7a5b5cfe30a589618768bp@chr7:126744627..126744632, -
3.07e-86FFCP PHASE1:Mm9::chr12:92642462..92642493,+#_0a71516092c7a5b5cfe30a589618768bp@chr12:92642462..92642493, +
3.07e-86FFCP PHASE2:Mm9::chr8:73107433..73107436,+#_0a71516092c7a5b5cfe30a589618768bp@chr8:73107433..73107436, +
3.07e-86FFCP PHASE2:Mm9::chr13:27404521..27404525,+#_0a71516092c7a5b5cfe30a589618768bp2@Prl6a1
3.07e-86FFCP PHASE1:Mm9::chr3:131154017..131154021,-#_0a71516092c7a5b5cfe30a589618768bp@chr3:131154017..131154021, -
3.07e-86FFCP PHASE2:Mm9::chr7:17319755..17319757,+#_0a71516092c7a5b5cfe30a589618768bp@chr7:17319755..17319757, +
3.07e-86FFCP PHASE1:Mm9::chr16:20784809..20784812,-#_0a71516092c7a5b5cfe30a589618768bp@chr16:20784809..20784812, -
3.07e-86FFCP PHASE2:Mm9::chr3:107171337..107171347,+#_0a71516092c7a5b5cfe30a589618768bp@chr3:107171337..107171347, +
3.07e-86FFCP PHASE2:Mm9::chr12:104620776..104620787,-#_0a71516092c7a5b5cfe30a589618768bp@chr12:104620776..104620787, -
3.07e-86FFCP PHASE1:Mm9::chr3:107171294..107171301,+#_0a71516092c7a5b5cfe30a589618768bp@chr3:107171294..107171301, +
3.07e-86FFCP PHASE2:Mm9::chr14:35235937..35235940,-#_0a71516092c7a5b5cfe30a589618768bp@chr14:35235937..35235940, -
3.07e-86FFCP PHASE1:Mm9::chr5:92691807..92691814,-#_0a71516092c7a5b5cfe30a589618768bp12@Naaa
3.07e-86FFCP PHASE1:Mm9::chr1:188533348..188533350,+#_0a71516092c7a5b5cfe30a589618768bp@chr1:188533348..188533350, +
3.07e-86FFCP PHASE1:Mm9::chrX:71447751..71447759,+#_0a71516092c7a5b5cfe30a589618768bp@chrX:71447751..71447759, +
3.07e-86FFCP PHASE1:Mm9::chr7:17319014..17319028,+#_0a71516092c7a5b5cfe30a589618768bp@chr7:17319014..17319028, +
3.07e-86FFCP PHASE2:Mm9::chr6:38060420..38060425,-#_0a71516092c7a5b5cfe30a589618768bp@chr6:38060420..38060425, -
3.07e-86FFCP PHASE2:Mm9::chr16:20784809..20784812,-#_0a71516092c7a5b5cfe30a589618768bp@chr16:20784809..20784812, -